View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2697_low_47 (Length: 266)

Name: NF2697_low_47
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2697_low_47
NF2697_low_47
[»] chr7 (15 HSPs)
chr7 (12-82)||(16187096-16187166)
chr7 (1-81)||(17181632-17181712)
chr7 (1-81)||(35961654-35961734)
chr7 (12-81)||(6413015-6413083)
chr7 (3-57)||(14129380-14129434)
chr7 (3-57)||(14136226-14136280)
chr7 (3-57)||(14433198-14433252)
chr7 (6-81)||(3328973-3329047)
chr7 (42-82)||(13898714-13898754)
chr7 (42-82)||(14188082-14188122)
chr7 (42-82)||(15214796-15214836)
chr7 (42-82)||(16250003-16250043)
chr7 (42-82)||(16574482-16574522)
chr7 (42-82)||(16591140-16591180)
chr7 (42-82)||(48744772-48744812)
[»] chr1 (12 HSPs)
chr1 (1-82)||(11807965-11808046)
chr1 (1-81)||(20243717-20243797)
chr1 (1-81)||(954024-954104)
chr1 (2-81)||(23065601-23065679)
chr1 (4-81)||(22433879-22433955)
chr1 (42-82)||(20902367-20902407)
chr1 (42-82)||(21180059-21180099)
chr1 (15-82)||(14431346-14431413)
chr1 (15-82)||(20580523-20580590)
chr1 (37-82)||(45495145-45495190)
chr1 (42-82)||(21660612-21660652)
chr1 (42-82)||(28203537-28203577)
[»] scaffold0518 (1 HSPs)
scaffold0518 (1-81)||(8647-8727)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-81)||(5710-5790)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-81)||(19431-19511)
[»] chr8 (11 HSPs)
chr8 (1-81)||(22024501-22024580)
chr8 (1-81)||(22062516-22062595)
chr8 (20-81)||(22178770-22178831)
chr8 (199-256)||(43118715-43118772)
chr8 (220-256)||(43118938-43118974)
chr8 (221-256)||(43118497-43118532)
chr8 (28-82)||(10833898-10833952)
chr8 (15-81)||(23654547-23654612)
chr8 (37-82)||(24706800-24706845)
chr8 (42-82)||(15002881-15002921)
chr8 (42-82)||(25657293-25657333)
[»] chr2 (6 HSPs)
chr2 (1-81)||(19718396-19718475)
chr2 (28-82)||(12626903-12626957)
chr2 (42-82)||(21245924-21245964)
chr2 (42-82)||(22110767-22110807)
chr2 (42-82)||(23376150-23376190)
chr2 (42-82)||(24272802-24272842)
[»] chr4 (13 HSPs)
chr4 (1-81)||(11170161-11170241)
chr4 (6-81)||(16999085-16999159)
chr4 (15-82)||(9333319-9333386)
chr4 (15-82)||(9387102-9387169)
chr4 (15-82)||(10314753-10314820)
chr4 (12-81)||(10783219-10783286)
chr4 (42-82)||(13879010-13879050)
chr4 (42-82)||(14035976-14036016)
chr4 (42-82)||(15447164-15447204)
chr4 (42-82)||(15991508-15991548)
chr4 (42-82)||(16277048-16277088)
chr4 (42-82)||(28919909-28919949)
chr4 (42-82)||(33661372-33661412)
[»] chr3 (7 HSPs)
chr3 (1-81)||(14293864-14293943)
chr3 (1-81)||(14299491-14299570)
chr3 (3-57)||(13202513-13202567)
chr3 (28-82)||(15009151-15009205)
chr3 (28-82)||(54042696-54042750)
chr3 (42-82)||(178249-178289)
chr3 (42-82)||(52337734-52337774)
[»] scaffold0348 (1 HSPs)
scaffold0348 (12-79)||(3696-3763)
[»] scaffold0114 (1 HSPs)
scaffold0114 (6-76)||(43098-43168)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-81)||(18653-18732)
[»] scaffold0213 (1 HSPs)
scaffold0213 (6-81)||(191-265)
[»] scaffold0220 (1 HSPs)
scaffold0220 (3-57)||(11535-11589)
[»] scaffold0063 (1 HSPs)
scaffold0063 (6-74)||(25393-25460)
[»] scaffold0010 (1 HSPs)
scaffold0010 (15-82)||(106514-106581)
[»] chr6 (2 HSPs)
chr6 (221-256)||(17468034-17468069)
chr6 (37-82)||(16830879-16830924)
[»] chr5 (2 HSPs)
chr5 (15-82)||(23669419-23669486)
chr5 (15-82)||(23694514-23694581)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-35)||(21345-21379)
[»] scaffold0790 (1 HSPs)
scaffold0790 (37-81)||(5695-5738)
[»] scaffold0609 (1 HSPs)
scaffold0609 (42-82)||(868-908)
[»] scaffold0607 (1 HSPs)
scaffold0607 (42-82)||(4037-4077)
[»] scaffold0500 (1 HSPs)
scaffold0500 (42-82)||(10493-10533)
[»] scaffold0335 (1 HSPs)
scaffold0335 (42-82)||(2027-2067)
[»] scaffold0151 (1 HSPs)
scaffold0151 (42-82)||(10327-10367)
[»] scaffold0124 (1 HSPs)
scaffold0124 (42-82)||(35207-35247)
[»] scaffold0107 (1 HSPs)
scaffold0107 (42-82)||(4121-4161)
[»] scaffold0042 (2 HSPs)
scaffold0042 (42-82)||(52447-52487)
scaffold0042 (42-82)||(67943-67983)
[»] scaffold0008 (1 HSPs)
scaffold0008 (42-82)||(11176-11216)


Alignment Details
Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 16187096 - 16187166
Alignment:
Q  12 ccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16187096 ccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 16187166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17181712 - 17181632
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17181712 tttatttactccccattaattctaataaattctaacataacccccaaaactccaatttaatactaattctcacttattcta 17181632  T

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Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35961734 - 35961654
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35961734 tttaattactcccccttaattctaataaattctaacataacccccaaaactccaatttaatactaattctcacttattcta 35961654  T

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Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 6413015 - 6413083
Alignment:
Q  12 ccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||||| |||||||||    
T  6413015 ccccttaattctaataaattctaacataacccccaaaactccaa-ttaattcaaattctcgcttattcta 6413083  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 14129380 - 14129434
Alignment:
Q  3 tatttactgccccttaattctaataaattctaacataacccccaaaactcaaatt 57  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  14129380 tatttactcccccttaattctattaaattctaacataacccccaaaactctaatt 14129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 14136226 - 14136280
Alignment:
Q  3 tatttactgccccttaattctaataaattctaacataacccccaaaactcaaatt 57  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  14136226 tatttactcccccttaattctattaaattctaacataacccccaaaactctaatt 14136280  T

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Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 14433198 - 14433252
Alignment:
Q  3 tatttactgccccttaattctaataaattctaacataacccccaaaactcaaatt 57  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  14433198 tatttactcccccttaattctattaaattctaacataacccccaaaactctaatt 14433252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 3328973 - 3329047
Alignment:
Q  6 ttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaa-ttctcacttattcta 81  Q
    ||||| |||||||||||||||||||||||  ||||| ||| |||||| ||  ||||| ||| |||||||||||||||    
T  3328973 ttactcccccttaattctaataaattcta--ataactccccaaactccaaaataatattaatttctcacttattcta 3329047  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 13898714 - 13898754
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  13898714 ccccaaaactccaattaaatcctaattctcacttattctat 13898754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 14188122 - 14188082
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  14188122 ccccaaaactccaattaaatcctaattctcacttattctat 14188082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 15214796 - 15214836
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  15214796 ccccaaaactccaattaaatcctaattctcacttattctat 15214836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 16250043 - 16250003
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  16250043 ccccaaaactccaattaaatcctaattctcacttattctat 16250003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 16574482 - 16574522
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  16574482 ccccaaaactccaattaaatcctaattctcacttattctat 16574522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 16591180 - 16591140
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  16591180 ccccaaaactccaattaaatcctaattctcacttattctat 16591140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 48744772 - 48744812
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  48744772 ccccaaaactccaattaaatcctaattctcacttattctat 48744812  T

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Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11808046 - 11807965
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11808046 tttatttattcccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaactctcacttattctat 11807965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20243717 - 20243797
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  20243717 tttatttactcccccttaattctaataaattctaacataacccccaaaactccaatttaatactaattctcacttgttcta 20243797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 954104 - 954024
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  954104 tttatttactcccccttaattctaataaattctaacataaccccaaaaactccaatttaatactaatactcacttattcta 954024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 23065679 - 23065601
Alignment:
Q  2 ttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  23065679 ttatttactcccccttaattctaataaattctaacataacccccaaaactccaa-ttaatactaattctcacttattcta 23065601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 22433955 - 22433879
Alignment:
Q  4 atttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  22433955 atttactcccccttaattctaataaattctaacataacccccaaaactccaa-ttaatattaattctcacttattcta 22433879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 20902367 - 20902407
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  20902367 ccccaaaactcaaattaaatcctaattctcacttattctat 20902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 21180099 - 21180059
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  21180099 ccccaaaactcaaattaaatcctaattctcacttattctat 21180059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 14431413 - 14431346
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||||||  |||||||||||   |||| | ||| ||||||||||||||||||||    
T  14431413 cttaattctattaaattctaatttaacccccaaactccaaaataaatcctaattctcacttattctat 14431346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 20580523 - 20580590
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||||||  |||||||||||   |||| | ||| ||||||||||||||||||||    
T  20580523 cttaattctattaaattctaatttaacccccaaactccaaaataaatcctaattctcacttattctat 20580590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 45495190 - 45495145
Alignment:
Q  37 ataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  45495190 ataacccccaaaactccaattaaatcctatttctcacttattctat 45495145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 21660612 - 21660652
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  21660612 ccccaaaactccaattaaattctaattctcacttattctat 21660652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 28203577 - 28203537
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  28203577 ccccaaaactccaattaaatcctaattctcacttattctat 28203537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8647 - 8727
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  8647 tttatttactcccccttaattctaataaattctaacataacccccaaaaatccaatttaatactaattctcacttattcta 8727  T

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Target: scaffold0101 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5790 - 5710
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5790 tttatttactcccccttaattctaataaattccaacataacctccaaaactcaaatttaatactaattctcacttattcta 5710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19511 - 19431
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  19511 tttatttactcccccttaattctaataaattctaacataacccccaaaactccaatttaatactaattcccacttattcta 19431  T

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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22024580 - 22024501
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22024580 tttatttactcccccttaattctaataaattctaacataacccccaaaactccaa-ttaatactaattctcacttattcta 22024501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22062595 - 22062516
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22062595 tttatttactcccccttaattctaataaattctaacataacccccaaaactccaa-ttaatactaattctcacttattcta 22062516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 22178770 - 22178831
Alignment:
Q  20 ttctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  22178770 ttctattaaattctaacataacccccaaaactccaatttaatactaattctctcttattcta 22178831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 43118715 - 43118772
Alignment:
Q  199 attcaaaccttaaccctatctaaaaactaattcatatgattcaaaccttaaccctatg 256  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  43118715 attcaaacattaaacctatctaaaaactaattcacatgattcaaaccttaaccctatg 43118772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 43118938 - 43118974
Alignment:
Q  220 aaaaactaattcatatgattcaaaccttaaccctatg 256  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43118938 aaaaactaattcacatgattcaaaccttaaccctatg 43118974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 256
Target Start/End: Original strand, 43118497 - 43118532
Alignment:
Q  221 aaaactaattcatatgattcaaaccttaaccctatg 256  Q
    |||||||||||| |||||||||||||||||||||||    
T  43118497 aaaactaattcacatgattcaaaccttaaccctatg 43118532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 10833952 - 10833898
Alignment:
Q  28 aattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||| | |||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  10833952 aattctcatataacccccaaaactccaattaaattctatttctcacttattctat 10833898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 23654547 - 23654612
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||| || ||| |||||||||||||||| ||| ||||| |||||| |||||||||||    
T  23654547 cttaattctattaa-ttataatataacccccaaaactccaatataatattaattcccacttattcta 23654612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 24706845 - 24706800
Alignment:
Q  37 ataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  24706845 ataacccccaaaactccaattaaatcctatttctcacttattctat 24706800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15002921 - 15002881
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  15002921 ccccaaaactccaattaaatcctaattctcacttattctat 15002881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 25657333 - 25657293
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  25657333 ccccaaaactccaattaaatcctaattctcacttattctat 25657293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19718475 - 19718396
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  19718475 tttatttactcccccttaattctaataaattctaacataacccccaaaactccaa-ttaatactaattctcacttattcta 19718396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 12626957 - 12626903
Alignment:
Q  28 aattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||| | |||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  12626957 aattctcatataacccccaaaactccaattaaattctatttctcacttattctat 12626903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 21245924 - 21245964
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  21245924 ccccaaaactccaattaaatcctaattctcacttattctat 21245964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 22110767 - 22110807
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  22110767 ccccaaaactccaattaaatcctaattctcacttattctat 22110807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 23376150 - 23376190
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  23376150 ccccaaaactccaattaaatcctaattctcacttattctat 23376190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 24272842 - 24272802
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  24272842 ccccaaaactccaattaaatcctaattctcacttattctat 24272802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11170241 - 11170161
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  11170241 tttatttactcccccttgattctaataaattccaacataacccccaaaactccaatttaatactaattatcacttattcta 11170161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 16999159 - 16999085
Alignment:
Q  6 ttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  16999159 ttactcccccttaattctaataaattctaacataacccccaaaactccaa-ttaatactaattctcacttattcta 16999085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 9333386 - 9333319
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||||||  |||||||||||   |||| | ||| ||||||||||||||||||||    
T  9333386 cttaattctattaaattctaatttaacccccaaactccaaaataaatcctaattctcacttattctat 9333319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 9387169 - 9387102
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||||||  |||||||||||   |||| | ||| ||||||||||||||||||||    
T  9387169 cttaattctattaaattctaatttaacccccaaactccaaaataaatcctaattctcacttattctat 9387102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 10314753 - 10314820
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||||||  |||||||||||   |||| | ||| ||||||||||||||||||||    
T  10314753 cttaattctattaaattctaatttaacccccaaactccaaaataaatcctaattctcacttattctat 10314820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 10783286 - 10783219
Alignment:
Q  12 ccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    ||||||||||||| ||| || |||||||||||||||||||| || ||||| | ||||| |||||||||||    
T  10783286 ccccttaattctattaa-ttataacataacccccaaaactccaa-ttaattcaaattcccacttattcta 10783219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 13879010 - 13879050
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  13879010 ccccaaaactccaattaaatcctaattctcacttattctat 13879050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 14035976 - 14036016
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  14035976 ccccaaaactccaattaaatcctaattctcacttattctat 14036016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15447204 - 15447164
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  15447204 ccccaaaactccaattaaatcctaattctcacttattctat 15447164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 15991508 - 15991548
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  15991508 ccccaaaactccaattaaatcctaattctcacttattctat 15991548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 16277088 - 16277048
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  16277088 ccccaaaactccaattaaatcctaattctcacttattctat 16277048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 28919909 - 28919949
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  28919909 ccccaaaactccaattaaatcctaattctcacttattctat 28919949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 33661412 - 33661372
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  33661412 ccccaaaactccaattaaatcctaattctcacttattctat 33661372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14293864 - 14293943
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  14293864 tttatttactcccccttaattctaataaattctaacataacccccaaaactc-catttaatactaattcttacttattcta 14293943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14299491 - 14299570
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  14299491 tttatttactcccccttaattctaataaattctaacataacccccaaaactc-catttaatactaattcttacttattcta 14299570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 13202567 - 13202513
Alignment:
Q  3 tatttactgccccttaattctaataaattctaacataacccccaaaactcaaatt 57  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  13202567 tatttactcccccttaattctattaaattctaacataacccccaaaactctaatt 13202513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 15009205 - 15009151
Alignment:
Q  28 aattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||| | |||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  15009205 aattctcatataacccccaaaactccaattaaattctatttctcacttattctat 15009151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 54042696 - 54042750
Alignment:
Q  28 aattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||| | |||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  54042696 aattctcatataacccccaaaactccaattaaattctatttctcacttattctat 54042750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 178289 - 178249
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  178289 ccccaaaactccaattaaattctaattctcacttattctat 178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 52337774 - 52337734
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  52337774 ccccaaaactccaattaaatcctaattctcacttattctat 52337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 3763 - 3696
Alignment:
Q  12 ccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattc 79  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3763 ccccttaattctattaaattctaacataacccccaaaactccaatttaatactaattctcacttattc 3696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 43098 - 43168
Alignment:
Q  6 ttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcactta 76  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  43098 ttactcccccttaattctattaaattccaacataacccccaaaactccaatttaatactaattctcactta 43168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18653 - 18732
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||| ||||||||    
T  18653 tttatttactcccccttgattctaataaattctaacataacccccaaaactccaa-ttaattcaaattctcatttattcta 18732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 191 - 265
Alignment:
Q  6 ttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    ||||| ||||||||||||| |||||||  |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  191 ttactcccccttaattctattaaattccgacataacccccaaa-ctccaatttaatactaattctcacttattcta 265  T

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Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 11535 - 11589
Alignment:
Q  3 tatttactgccccttaattctaataaattctaacataacccccaaaactcaaatt 57  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  11535 tatttacacccccttaattctaataaattctaacataacccccaaaactccaatt 11589  T

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Target: scaffold0063 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 25393 - 25460
Alignment:
Q  6 ttactgccccttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcact 74  Q
    ||||| ||||||||||||| ||||||| ||||||||||||  ||||| |||||||||||||||||||||    
T  25393 ttactcccccttaattctattaaattccaacataaccccc-taactccaatttaatactaattctcact 25460  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 106514 - 106581
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||| ||  |||||||||||  ||||| | ||| ||||||||||||||||||||    
T  106514 cttaattctattaaattccaatttaacccccaaacttcaaaataaatcctaattctcacttattctat 106581  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 256
Target Start/End: Original strand, 17468034 - 17468069
Alignment:
Q  221 aaaactaattcatatgattcaaaccttaaccctatg 256  Q
    |||||||||||| |||||||||||||||||||||||    
T  17468034 aaaactaattcacatgattcaaaccttaaccctatg 17468069  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 16830879 - 16830924
Alignment:
Q  37 ataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  16830879 ataacccccaaaactccaattaaatcctacttctcacttattctat 16830924  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 23669419 - 23669486
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||||||  |||||||||||   |||| | ||| ||||||||||||||||||||    
T  23669419 cttaattctattaaattctaatttaacccccaaactccaaaataaatcctaattctcacttattctat 23669486  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 23694514 - 23694581
Alignment:
Q  15 cttaattctaataaattctaacataacccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    |||||||||| ||||||||||  |||||||||||   |||| | ||| ||||||||||||||||||||    
T  23694514 cttaattctattaaattctaatttaacccccaaactccaaaataaatcctaattctcacttattctat 23694581  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21345 - 21379
Alignment:
Q  1 tttatttactgccccttaattctaataaattctaa 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  21345 tttatttactcccccttaattctaataaattctaa 21379  T

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Target: scaffold0790 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 5695 - 5738
Alignment:
Q  37 ataacccccaaaactcaaatttaatactaattctcacttattcta 81  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||    
T  5695 ataacccccaaaactccaatt-aataataattctcacttattcta 5738  T

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Target: scaffold0609 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 868 - 908
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  868 ccccaaaactctaattaaatcctaattctcacttattctat 908  T

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Target: scaffold0607 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 4037 - 4077
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  4037 ccccaaaactccaattaaatcctaattctcacttattctat 4077  T

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Target: scaffold0500 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 10533 - 10493
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  10533 ccccaaaactccaattaaatcctaattctcacttattctat 10493  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 2027 - 2067
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  2027 ccccaaaactccaattaaatcctaattctcacttattctat 2067  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 10327 - 10367
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  10327 ccccaaaactccaattaaatcctaattctcacttattctat 10367  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 35247 - 35207
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  35247 ccccaaaactccaattaaatcctaattctcacttattctat 35207  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 4121 - 4161
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  4121 ccccaaaactccaattaaatcctaattctcacttattctat 4161  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 52447 - 52487
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  52447 ccccaaaactccaattaaatcctaattctcacttattctat 52487  T

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Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 67943 - 67983
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  67943 ccccaaaactctaattaaatcctaattctcacttattctat 67983  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 11216 - 11176
Alignment:
Q  42 ccccaaaactcaaatttaatactaattctcacttattctat 82  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  11216 ccccaaaactccaattaaatcctaattctcacttattctat 11176  T

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