View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2697_low_52 (Length: 246)
Name: NF2697_low_52
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2697_low_52 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 2817012 - 2817239
Alignment:
| Q |
1 |
gagtgtatacctaatttttctcgttcaggaagattgtataataaatttcaagttgtattgtaaattctgaagtataagggacacaaaaaatgtataccat |
100 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
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| T |
2817012 |
gagtgtatacataatttttctcgttcaggaagattgtataataaatttcaagttgtattgtaaattctgaagtataatgcacacaaaaaatgtataccat |
2817111 |
T |
|
| Q |
101 |
aaatttgaagttcatgatacgtcaagtgtataatatacatgtgtgtacccaaaaaataataatgaagagtaggtatgcaaaaattcaaatttagggtatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2817112 |
aaatttgaagttcatgatacgtcaagtgtataatatacatgtgtgtacccaaaaaataataatgaagagtaggtatgcaaaaattcaaatttagggtatg |
2817211 |
T |
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| Q |
201 |
aagaatggaaatataggcatgcaataaa |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
2817212 |
aagaatggaaatataggcatgcaataaa |
2817239 |
T |
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