View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2697_low_55 (Length: 243)
Name: NF2697_low_55
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2697_low_55 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 33453650 - 33453862
Alignment:
| Q |
19 |
agtcaggtgataaattcattaaagaaacttttaattcagttttcatatagaaaaaagtttggtagaattggtcacatgttattattccttaactgcacaa |
118 |
Q |
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| T |
33453650 |
agtcaggtaataaattcattaaagaaacttttaattcagttttcatatagaaaaaagtttggtagaattggtcacatgttattattccttaactgcacaa |
33453749 |
T |
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| Q |
119 |
tatcaattattagaaattatattgagcaatagtgtcagtcaatatttattgttatattcatcaagttttcatactttctgccacttttgcatctctttta |
218 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33453750 |
tatcaattattagaaattatattgagcaatagtatcagtcaatatttattgttatattcatcaagttttcatactttctgccacttttgcatctctttta |
33453849 |
T |
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| Q |
219 |
caaaagcctccta |
231 |
Q |
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||||||||||||| |
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| T |
33453850 |
caaaagcctccta |
33453862 |
T |
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