View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2697_low_56 (Length: 241)
Name: NF2697_low_56
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2697_low_56 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 41247589 - 41247810
Alignment:
| Q |
20 |
gagggttggttggttgttgagggtggtaaatgtgaaaatttatgtatggtaggnnnnnnntggacgtattcgaagaaacataaatgagaaaaattgaaaa |
119 |
Q |
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| T |
41247589 |
gagggttggttggttgttgagggtggtaaatgtgaaaatttatgtatggtagggaaaaaatggacgtattcgaagaaacataaatgagaaaaattgaaga |
41247688 |
T |
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| Q |
120 |
agttgtaaagtgagggtgtatatatgaattttaatgaaacgcacacccatgcagaagaagggtagcaataactcctgcatatttgtgaatgggtggtagc |
219 |
Q |
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| T |
41247689 |
agttgtaaagtgagggtgtatatatgaattttaatgaaacgcacacccatgcagaagaagggtagcaataactcctgcatatttgtgaatgggtggtagc |
41247788 |
T |
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| Q |
220 |
agagtcattctgcaactagtga |
241 |
Q |
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| T |
41247789 |
agagtcattctgcaactagtga |
41247810 |
T |
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