View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2697_low_8 (Length: 532)

Name: NF2697_low_8
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2697_low_8
NF2697_low_8
[»] chr6 (23 HSPs)
chr6 (113-304)||(34889061-34889251)
chr6 (188-295)||(8049188-8049292)
chr6 (223-297)||(6111132-6111206)
chr6 (223-297)||(7972641-7972715)
chr6 (224-297)||(4122788-4122861)
chr6 (224-296)||(25056498-25056570)
chr6 (223-297)||(4665885-4665959)
chr6 (223-282)||(26252600-26252659)
chr6 (223-297)||(9095778-9095852)
chr6 (228-297)||(2437849-2437918)
chr6 (224-297)||(14093796-14093869)
chr6 (238-286)||(9353138-9353186)
chr6 (223-294)||(21527333-21527404)
chr6 (238-297)||(23410490-23410549)
chr6 (239-297)||(6396629-6396688)
chr6 (326-361)||(2437913-2437948)
chr6 (117-168)||(8460991-8461042)
chr6 (326-357)||(9095847-9095878)
chr6 (330-361)||(21527406-21527437)
chr6 (238-284)||(4184709-4184755)
chr6 (224-270)||(12400746-12400792)
chr6 (223-280)||(31660518-31660573)
chr6 (450-490)||(14426651-14426691)
[»] chr2 (50 HSPs)
chr2 (225-297)||(44898117-44898189)
chr2 (223-297)||(20171448-20171522)
chr2 (223-297)||(150288-150360)
chr2 (224-290)||(4316711-4316777)
chr2 (224-297)||(36244046-36244119)
chr2 (223-290)||(33659716-33659783)
chr2 (223-297)||(158100-158174)
chr2 (223-297)||(11083909-11083983)
chr2 (223-297)||(15507457-15507530)
chr2 (224-282)||(41541066-41541124)
chr2 (224-297)||(45273425-45273498)
chr2 (223-290)||(1770188-1770255)
chr2 (224-297)||(21252587-21252660)
chr2 (224-297)||(25965883-25965956)
chr2 (224-297)||(27746474-27746547)
chr2 (233-286)||(33659575-33659628)
chr2 (233-297)||(29882185-29882249)
chr2 (223-290)||(29408800-29408867)
chr2 (226-279)||(7486328-7486381)
chr2 (228-297)||(42872267-42872335)
chr2 (223-279)||(408497-408553)
chr2 (233-297)||(32113373-32113437)
chr2 (223-296)||(1397462-1397536)
chr2 (225-297)||(16806561-16806634)
chr2 (225-297)||(16845842-16845915)
chr2 (233-290)||(42756804-42756861)
chr2 (223-290)||(3309847-3309913)
chr2 (326-361)||(4959459-4959494)
chr2 (326-361)||(27746444-27746479)
chr2 (223-262)||(31741919-31741958)
chr2 (113-168)||(33024390-33024445)
chr2 (225-284)||(37814535-37814594)
chr2 (228-290)||(4700975-4701037)
chr2 (233-295)||(37360345-37360407)
chr2 (227-272)||(31193808-31193853)
chr2 (328-361)||(42756767-42756800)
chr2 (250-297)||(11073993-11074038)
chr2 (224-284)||(12411668-12411728)
chr2 (224-284)||(12423728-12423788)
chr2 (113-165)||(36243925-36243977)
chr2 (233-284)||(13140908-13140958)
chr2 (223-273)||(14371154-14371205)
chr2 (223-294)||(34424785-34424856)
chr2 (239-297)||(38589326-38589384)
chr2 (231-284)||(41117444-41117498)
chr2 (234-271)||(2218236-2218273)
chr2 (115-156)||(7486202-7486243)
chr2 (383-432)||(21925635-21925683)
chr2 (224-284)||(13386443-13386502)
chr2 (223-270)||(20891314-20891359)
[»] chr5 (37 HSPs)
chr5 (223-297)||(39614839-39614913)
chr5 (223-290)||(1590163-1590230)
chr5 (223-297)||(17202834-17202908)
chr5 (234-297)||(19924894-19924957)
chr5 (224-290)||(17201240-17201306)
chr5 (223-297)||(32717988-32718062)
chr5 (224-297)||(12436740-12436813)
chr5 (234-290)||(19931850-19931906)
chr5 (225-281)||(36194030-36194086)
chr5 (223-290)||(14654941-14655008)
chr5 (223-297)||(17591653-17591726)
chr5 (224-282)||(20201658-20201716)
chr5 (233-282)||(11825449-11825498)
chr5 (234-278)||(19922163-19922207)
chr5 (233-284)||(8544748-8544799)
chr5 (223-302)||(32474179-32474257)
chr5 (224-282)||(249549-249607)
chr5 (223-297)||(36246291-36246365)
chr5 (224-281)||(1583481-1583538)
chr5 (254-297)||(19803665-19803708)
chr5 (224-282)||(43346679-43346737)
chr5 (223-264)||(6428276-6428317)
chr5 (223-284)||(11992224-11992285)
chr5 (329-362)||(14654919-14654952)
chr5 (223-271)||(6434074-6434122)
chr5 (238-290)||(16365745-16365797)
chr5 (223-291)||(39584835-39584903)
chr5 (326-361)||(17557933-17557968)
chr5 (326-361)||(19803635-19803670)
chr5 (259-294)||(28619999-28620034)
chr5 (235-270)||(34766305-34766340)
chr5 (239-273)||(14967142-14967176)
chr5 (255-297)||(36437381-36437423)
chr5 (115-168)||(249423-249476)
chr5 (326-359)||(20201611-20201644)
chr5 (450-490)||(12659364-12659404)
chr5 (328-356)||(17201208-17201236)
[»] chr8 (47 HSPs)
chr8 (223-297)||(25496656-25496730)
chr8 (223-297)||(7578211-7578285)
chr8 (223-301)||(14896632-14896710)
chr8 (224-297)||(40557218-40557290)
chr8 (223-297)||(9455241-9455315)
chr8 (223-297)||(25400477-25400551)
chr8 (224-297)||(16599382-16599455)
chr8 (113-276)||(34038919-34039079)
chr8 (224-297)||(41411469-41411541)
chr8 (223-290)||(2742941-2743008)
chr8 (224-290)||(5870769-5870835)
chr8 (228-286)||(7695303-7695361)
chr8 (223-297)||(27231780-27231854)
chr8 (224-297)||(32233635-32233709)
chr8 (223-297)||(34146190-34146264)
chr8 (223-284)||(39628293-39628354)
chr8 (223-284)||(39637843-39637904)
chr8 (224-283)||(36682579-36682637)
chr8 (223-286)||(45083030-45083093)
chr8 (224-290)||(38401580-38401646)
chr8 (227-283)||(3741656-3741712)
chr8 (223-278)||(3443733-3443788)
chr8 (223-290)||(16393718-16393785)
chr8 (224-283)||(29315875-29315934)
chr8 (224-290)||(1530599-1530665)
chr8 (223-276)||(38457299-38457352)
chr8 (225-297)||(4418577-4418648)
chr8 (248-292)||(30887894-30887938)
chr8 (249-297)||(44666214-44666262)
chr8 (113-168)||(1358789-1358844)
chr8 (233-284)||(43026703-43026754)
chr8 (224-270)||(27166723-27166769)
chr8 (118-168)||(43026562-43026612)
chr8 (224-293)||(1256734-1256802)
chr8 (326-361)||(3443802-3443837)
chr8 (233-284)||(11087147-11087198)
chr8 (326-361)||(32233605-32233640)
chr8 (327-361)||(1530668-1530702)
chr8 (327-361)||(4418547-4418581)
chr8 (327-361)||(34146160-34146194)
chr8 (224-270)||(34870566-34870612)
chr8 (115-168)||(3741790-3741843)
chr8 (328-361)||(7695369-7695402)
chr8 (249-293)||(1358940-1358984)
chr8 (329-361)||(1358986-1359018)
chr8 (329-357)||(2742997-2743025)
chr8 (249-292)||(4418914-4418958)
[»] chr7 (39 HSPs)
chr7 (224-297)||(28226553-28226626)
chr7 (223-284)||(2798623-2798684)
chr7 (224-297)||(10535017-10535090)
chr7 (224-297)||(36412845-36412917)
chr7 (223-297)||(2273520-2273594)
chr7 (227-290)||(10026226-10026291)
chr7 (223-297)||(27723295-27723369)
chr7 (224-297)||(15643340-15643413)
chr7 (224-297)||(35793119-35793192)
chr7 (225-297)||(37124179-37124251)
chr7 (224-296)||(43368791-43368863)
chr7 (113-297)||(4962831-4963018)
chr7 (223-297)||(39430609-39430683)
chr7 (224-297)||(39599698-39599772)
chr7 (223-290)||(25290632-25290699)
chr7 (223-297)||(16196791-16196864)
chr7 (223-297)||(24394233-24394307)
chr7 (224-297)||(4567321-4567394)
chr7 (226-271)||(4678434-4678479)
chr7 (234-286)||(14735073-14735124)
chr7 (223-282)||(39427421-39427481)
chr7 (245-297)||(39617549-39617601)
chr7 (223-297)||(3835674-3835746)
chr7 (326-361)||(14771486-14771521)
chr7 (326-361)||(15221938-15221973)
chr7 (224-290)||(39432604-39432670)
chr7 (223-284)||(1752595-1752656)
chr7 (228-289)||(8614843-8614903)
chr7 (326-361)||(3835741-3835776)
chr7 (326-361)||(4963013-4963048)
chr7 (326-361)||(35793187-35793222)
chr7 (249-284)||(44550049-44550084)
chr7 (326-356)||(46672107-46672137)
chr7 (224-297)||(7809204-7809277)
chr7 (250-295)||(39247325-39247369)
chr7 (233-273)||(29606064-29606104)
chr7 (233-273)||(29747472-29747512)
chr7 (329-357)||(39432587-39432615)
chr7 (450-490)||(48103790-48103830)
[»] chr4 (48 HSPs)
chr4 (227-295)||(9089626-9089694)
chr4 (223-297)||(46195753-46195827)
chr4 (224-297)||(45635461-45635534)
chr4 (235-297)||(24074131-24074193)
chr4 (223-297)||(25490469-25490543)
chr4 (223-297)||(50720906-50720980)
chr4 (223-284)||(25493845-25493906)
chr4 (231-292)||(33808885-33808946)
chr4 (223-282)||(668035-668094)
chr4 (224-282)||(41502560-41502618)
chr4 (223-297)||(45666306-45666380)
chr4 (223-292)||(24538312-24538381)
chr4 (224-297)||(34032006-34032079)
chr4 (224-297)||(38434244-38434317)
chr4 (224-284)||(2492863-2492923)
chr4 (223-297)||(19443577-19443651)
chr4 (223-281)||(21956486-21956544)
chr4 (223-297)||(37209992-37210066)
chr4 (223-297)||(37371413-37371486)
chr4 (249-297)||(6949098-6949146)
chr4 (228-283)||(33889622-33889677)
chr4 (223-297)||(38840424-38840498)
chr4 (238-284)||(49263016-49263062)
chr4 (224-297)||(49299869-49299943)
chr4 (223-297)||(54982762-54982836)
chr4 (224-297)||(30913540-30913612)
chr4 (115-168)||(30913680-30913733)
chr4 (326-361)||(17330805-17330840)
chr4 (255-290)||(21342249-21342284)
chr4 (251-290)||(46016623-46016662)
chr4 (251-290)||(46250055-46250094)
chr4 (224-282)||(1821597-1821655)
chr4 (223-293)||(2684687-2684756)
chr4 (115-168)||(30912753-30912806)
chr4 (233-270)||(42219055-42219092)
chr4 (223-276)||(47944463-47944516)
chr4 (233-297)||(38045419-38045483)
chr4 (223-297)||(23529521-23529596)
chr4 (330-361)||(24538385-24538416)
chr4 (326-361)||(37210061-37210096)
chr4 (244-290)||(46196822-46196869)
chr4 (117-168)||(53370277-53370328)
chr4 (326-361)||(53393345-53393380)
chr4 (224-297)||(20782475-20782548)
chr4 (243-276)||(27650852-27650885)
chr4 (238-290)||(38044944-38044996)
chr4 (450-490)||(47931365-47931405)
chr4 (224-276)||(53370430-53370482)
[»] chr3 (56 HSPs)
chr3 (224-297)||(54675189-54675261)
chr3 (224-292)||(633291-633359)
chr3 (233-297)||(5493558-5493622)
chr3 (223-297)||(9588750-9588824)
chr3 (223-297)||(45646605-45646679)
chr3 (223-297)||(45759959-45760033)
chr3 (224-297)||(20141017-20141090)
chr3 (223-283)||(19187671-19187731)
chr3 (223-282)||(44940873-44940932)
chr3 (239-297)||(1272431-1272489)
chr3 (239-297)||(19578337-19578395)
chr3 (223-296)||(25841940-25842013)
chr3 (233-297)||(19234007-19234071)
chr3 (113-168)||(9588899-9588954)
chr3 (223-282)||(21934489-21934548)
chr3 (224-297)||(296439-296513)
chr3 (224-297)||(2093781-2093854)
chr3 (228-297)||(25342389-25342458)
chr3 (223-272)||(25479619-25479668)
chr3 (228-284)||(23272072-23272128)
chr3 (224-285)||(23772250-23772313)
chr3 (223-290)||(375758-375827)
chr3 (223-297)||(27264118-27264192)
chr3 (224-297)||(2440658-2440730)
chr3 (233-290)||(7259721-7259778)
chr3 (113-165)||(3751600-3751652)
chr3 (226-297)||(20841326-20841395)
chr3 (224-285)||(23701951-23702014)
chr3 (224-285)||(23720407-23720470)
chr3 (224-285)||(23738863-23738926)
chr3 (224-284)||(29556509-29556569)
chr3 (188-297)||(34668687-34668793)
chr3 (113-168)||(15638386-15638441)
chr3 (238-297)||(37030988-37031047)
chr3 (223-269)||(3751492-3751538)
chr3 (114-168)||(6512462-6512516)
chr3 (231-269)||(15772305-15772343)
chr3 (229-290)||(16237600-16237661)
chr3 (231-272)||(25485838-25485879)
chr3 (116-168)||(29556422-29556474)
chr3 (223-267)||(38416358-38416402)
chr3 (326-361)||(296409-296444)
chr3 (113-160)||(296595-296642)
chr3 (326-361)||(2093751-2093786)
chr3 (326-361)||(5493528-5493563)
chr3 (249-284)||(10614618-10614653)
chr3 (326-361)||(20841296-20841331)
chr3 (234-297)||(21959700-21959762)
chr3 (326-361)||(21959757-21959792)
chr3 (223-290)||(45667468-45667535)
chr3 (223-297)||(27817422-27817495)
chr3 (228-282)||(38751097-38751151)
chr3 (450-490)||(5907338-5907378)
chr3 (329-361)||(7259767-7259799)
chr3 (450-490)||(14899896-14899936)
chr3 (326-358)||(25842009-25842041)
[»] chr1 (36 HSPs)
chr1 (223-292)||(1674777-1674846)
chr1 (224-297)||(2655719-2655792)
chr1 (224-297)||(3901028-3901100)
chr1 (224-297)||(50488770-50488842)
chr1 (223-282)||(52414961-52415020)
chr1 (223-297)||(788293-788367)
chr1 (223-297)||(10430530-10430604)
chr1 (223-297)||(36319977-36320051)
chr1 (228-297)||(43021139-43021208)
chr1 (235-297)||(39157064-39157127)
chr1 (223-282)||(40519207-40519266)
chr1 (223-297)||(10101679-10101752)
chr1 (224-282)||(23699437-23699495)
chr1 (224-278)||(32769020-32769074)
chr1 (228-297)||(11238258-11238327)
chr1 (224-297)||(13254768-13254841)
chr1 (233-297)||(6295765-6295829)
chr1 (113-165)||(19269871-19269923)
chr1 (223-282)||(30280058-30280117)
chr1 (223-274)||(52281747-52281798)
chr1 (223-269)||(39157128-39157174)
chr1 (223-282)||(4671439-4671498)
chr1 (239-297)||(31623135-31623193)
chr1 (224-297)||(39386701-39386772)
chr1 (328-361)||(52414890-52414923)
chr1 (243-290)||(21535845-21535892)
chr1 (250-297)||(23698770-23698817)
chr1 (224-271)||(49035289-49035336)
chr1 (326-360)||(13254836-13254870)
chr1 (249-295)||(21967191-21967237)
chr1 (224-270)||(32186544-32186590)
chr1 (450-490)||(115902-115942)
chr1 (116-168)||(1394745-1394797)
chr1 (329-361)||(21535881-21535913)
chr1 (229-265)||(23698834-23698870)
chr1 (116-168)||(35274966-35275018)
[»] scaffold0005 (2 HSPs)
scaffold0005 (224-297)||(256751-256824)
scaffold0005 (223-297)||(272383-272457)
[»] scaffold1130 (1 HSPs)
scaffold1130 (234-296)||(393-455)
[»] scaffold0118 (3 HSPs)
scaffold0118 (225-297)||(14926-14997)
scaffold0118 (326-361)||(14896-14931)
scaffold0118 (249-281)||(15277-15309)
[»] scaffold0188 (2 HSPs)
scaffold0188 (224-297)||(6399-6472)
scaffold0188 (117-160)||(6315-6358)
[»] scaffold0006 (2 HSPs)
scaffold0006 (223-290)||(46584-46650)
scaffold0006 (329-361)||(46639-46671)
[»] scaffold1327 (1 HSPs)
scaffold1327 (223-297)||(878-952)
[»] scaffold0242 (4 HSPs)
scaffold0242 (232-282)||(14823-14873)
scaffold0242 (232-282)||(23658-23708)
scaffold0242 (115-168)||(14935-14988)
scaffold0242 (115-168)||(23770-23823)


Alignment Details
Target: chr6 (Bit Score: 93; Significance: 5e-45; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 113 - 304
Target Start/End: Complemental strand, 34889251 - 34889061
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaacaannnnnnnnnnaacttttatgataacaataaacaaattttgttta 212  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||||| |||| ||          |||||||| ||||||||||||||||||||||||     
T  34889251 actcatcttatttatagaattttaactattcataaaaccattattataggtaataaaaaaaattt-aacttttaagataacaataaacaaattttgtttc 34889153  T
Q  213 agnnnnnnnncaaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtatatttggtt 304  Q
    ||        |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  34889152 agagaaaaaacaaactttaatttttcaaatatataacaataattagttttattgaaaaagataagagtaattaacaaagagtataattggtt 34889061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 8049292 - 8049188
Alignment:
Q  188 gataacaataaacaaattttgtttaagnnnnnnnncaaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaac 287  Q
    |||||||| ||||||||||||||||||        ||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||| ||    
T  8049292 gataacaagaaacaaattttgtttaagaaaaa---caaactttagttttccaaatagatatcattaattagttttattgaaaaagataagagtaattgac 8049196  T
Q  288 aaagggta 295  Q
    ||||||||    
T  8049195 aaagggta 8049188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 6111132 - 6111206
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||    
T  6111132 caaactttagttttccaaatatataacattaattagttttatttaaaaagataagagtaattgataaatggtata 6111206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 7972641 - 7972715
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||    
T  7972641 caaactttagtttttcaaatatataacattaattagttttattgaaaaatattagaataattgacaaagtgtata 7972715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 4122861 - 4122788
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||| ||||||    
T  4122861 aaactttactttttcaaatagataacattaattaattttattgaaaaagataagagtaattgagaaatggtata 4122788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 25056570 - 25056498
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtat 296  Q
    |||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  25056570 aaactttagttttccaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaagagtat 25056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 4665959 - 4665885
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||||||||||| | ||| ||||||    
T  4665959 caaactttagtttttcaaatatatagcattaattagttttatttaaaaatataagagtaattgataaatggtata 4665885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 26252600 - 26252659
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  26252600 caaactttatttttccaaatatatagcattaattagttttattaaaaaagataagagtaa 26252659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 9095778 - 9095852
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||| |||| |||||||||| ||||||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  9095778 caaattttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaatggtata 9095852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 2437849 - 2437918
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||| |||||| ||| ||||||||||||||||||||||| |||||| ||||| ||||||||||||    
T  2437849 tttagttttccaaatagatatcattaattagttttattgaaaaaaataagaataattgacaaagggtata 2437918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 14093796 - 14093869
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||  ||||  ||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  14093796 aaactttagttttcaaaatcgatagcattaattagttttattgaaaaagataagagtaattgacaaagagtata 14093869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 9353186 - 9353138
Alignment:
Q  238 caaatatataacattaattagttttattgaaaaagataagagtaattaa 286  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  9353186 caaatagatagcattaattagttttattgaaaaagataagagtaattaa 9353138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 21527333 - 21527404
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggt 294  Q
    ||||||||| ||||||||||||| | ||||||||||||||| ||||||| || ||| ||||| |||||||||    
T  21527333 caaactttagtttttcaaatataaagcattaattagttttaatgaaaaatattagaataattgacaaagggt 21527404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 23410549 - 23410490
Alignment:
Q  238 caaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||  ||||| |||||    
T  23410549 caaatatataacattaattagttttattaaaaaagataaaagtaatttgcaaagagtata 23410490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 6396629 - 6396688
Alignment:
Q  239 aaatatataacattaattagttttattg-aaaaagataagagtaattaacaaagggtata 297  Q
    ||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  6396629 aaatacattacattaattagttttattgaaaaaagataagaataattaagaaagggtata 6396688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 2437913 - 2437948
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||||||||||||||||| |||||    
T  2437913 ggtataattgacaaatcatacccttaaaattccaaa 2437948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 8461042 - 8460991
Alignment:
Q  117 atcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||||| |||||||    
T  8461042 atcttatttatagaattttaactattcatggaaccattgttataggtaacaa 8460991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 9095847 - 9095878
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaatac 357  Q
    ||||||||||||||||||||||||||||||||    
T  9095847 ggtataattgacaaatcatacccttaaaatac 9095878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 361
Target Start/End: Original strand, 21527406 - 21527437
Alignment:
Q  330 taattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||    
T  21527406 taattgacaaatcatacccttaaaataccaaa 21527437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 4184755 - 4184709
Alignment:
Q  238 caaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  4184755 caaatatatagcattaattaattttatttaaaaatataagagtaatt 4184709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 12400746 - 12400792
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaa 270  Q
    ||||||||||||| |||||| || ||||||| |||||||||||||||    
T  12400746 aaactttaattttacaaatacatgacattaactagttttattgaaaa 12400792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 31660573 - 31660518
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagt 280  Q
    ||||||||| ||||||||||| ||| |||| |||||||||||||||||| ||||||||    
T  31660573 caaactttagtttttcaaatagatagcatt-attagttttattgaaaaa-ataagagt 31660518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Original strand, 14426651 - 14426691
Alignment:
Q  450 aaacaactttttatataataaagactgttgttactgtcatt 490  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  14426651 aaacaactttttatataataaagattgttgttgatgtcatt 14426691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 44898189 - 44898117
Alignment:
Q  225 aactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44898189 aactttagtttttcaaatatataacattaattagttttattgaaaaagataagagtaattgacaaagggtata 44898117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 20171448 - 20171522
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20171448 caaactttagttttccaaatatataacattaattagttttattgaaaaagataagagtaattgacaaagggtata 20171522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 150288 - 150360
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  150288 caaactttagtttttcaaatatataacattaattagttttattgaaaa--ataagagtaattgacaaagggtata 150360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 4316777 - 4316711
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4316777 aaactttagttttccaaatatataacattaattagttttattgaaaaagataagagtaattgacaaa 4316711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 36244046 - 36244119
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  36244046 aaactttagttttccaaatatataacattaattagttttattaaaaaatataagagtaattgacaaagggtata 36244119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 33659783 - 33659716
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  33659783 caaacttcagtttttcaaatatataatattaattagttttattgaaaaagataagagtaattgacaaa 33659716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 158100 - 158174
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  158100 caaattttagttttccaaatatataaaattaattagttttattgaaaaagataagagtaatttgcaaagggtata 158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 11083983 - 11083909
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||| ||||||    
T  11083983 caaactttagtttttcaaatatataacattaattagttttattaaaaaagatcagagaaattgacaaaaggtata 11083909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 15507530 - 15507457
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  15507530 caaactttagtttttcaattatatagcattaattagttt-attgaaaaagataagagtaattgacaaagggtata 15507457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 41541124 - 41541066
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41541124 aaactttagtttttcaaatatatagcattaattagttttattgaaaaagataagagtaa 41541066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 45273425 - 45273498
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||  ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45273425 aaactttatttttctaaatagatatcattaattagttttattgaaaaagataagagtaattgacaaagggtata 45273498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 1770188 - 1770255
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  1770188 caaactttagtttttcaaatatataacattaattagttttattgaaaaaattaagagtgattgacaaa 1770255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 21252660 - 21252587
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||| |||||| |||||| |||||    
T  21252660 aaactttagtttttcaaatagatagcattaattaattttattgaaaaagataagtgtaattgacaaagagtata 21252587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 25965883 - 25965956
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||||||||||||||   |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  25965883 aaactttagtttttcaaatatataatgataatgagttttattgaaaaatataagagtaattgacaaagggtata 25965956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 27746547 - 27746474
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||| ||||||    
T  27746547 aaactgtagtttttcaaatatatagcattaattagttttattgaaaaatataaaagtaataaacaaaaggtata 27746474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 33659628 - 33659575
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaa 286  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33659628 ttttccaaatatataacattaattagttttattgaaaaatataagagtaattaa 33659575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 29882185 - 29882249
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||| || | ||||||||||    
T  29882185 tttttcaaatatataacattgattagttttattcaaaaagataagagtagttgagaaagggtata 29882249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 29408800 - 29408867
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||| |||| |||||| ||||||||||||| |||||||||||||||||| ||||||| |||||    
T  29408800 caaactttagttttgcaaatagataacattaattacttttattgaaaaagataaaagtaattgacaaa 29408867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 7486328 - 7486381
Alignment:
Q  226 actttaatttttcaaatatataacattaattagttttattgaaaaagataagag 279  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  7486328 actttagttttccaaatatataacattaattagttttattgaaaaatataagag 7486381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 42872267 - 42872335
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||| ||||||    
T  42872267 tttaaattttcaaatatataacattaattag-tttattaaaaaaaataagagtaattgacaaaaggtata 42872335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 408497 - 408553
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagag 279  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  408497 caaactttaattttttaaatatatagtattaattagttttattgaaaaaggtaagag 408553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 32113373 - 32113437
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||||||||||||||||||||||||||||||||| |||||| ||||| | ||||| ||||    
T  32113373 ttttccaaatatataacattaattagttttattgaaaaatataagaataattgataaaggatata 32113437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 1397536 - 1397462
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagtttta-ttgaaaaagataagagtaattaacaaagggtat 296  Q
    ||||||||||||||||||||| ||| |||||||||||||||    |||||||||| ||||||| |||||||||||    
T  1397536 caaactttaatttttcaaatagatagcattaattagttttacaaaaaaaagataaaagtaattgacaaagggtat 1397462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 16806561 - 16806634
Alignment:
Q  225 aactttaatttttcaaatatataacattaattag-ttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||| ||||||||||| | |||||||||||| |||| |||||||| ||||| |||||| ||||||||||||    
T  16806561 aactttagtttttcaaatagacaacattaattagttttttttgaaaaatataagtgtaattgacaaagggtata 16806634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 16845842 - 16845915
Alignment:
Q  225 aactttaatttttcaaatatataacattaattag-ttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||| ||||||||||| | |||||||||||| |||| |||||||| ||||| |||||| ||||||||||||    
T  16845842 aactttagtttttcaaatagacaacattaattagttttttttgaaaaatataagtgtaattgacaaagggtata 16845915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 42756861 - 42756804
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||| ||||||||| ||||||||||||||||||||||| |||||| ||||| |||||    
T  42756861 ttttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaa 42756804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 3309847 - 3309913
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||| ||||||||||| ||| || |||||||||||||||||||| |||| ||||||| |||||    
T  3309847 caaactttagtttttcaaatagatagcaataattagttttattgaaaaa-ataaaagtaattgacaaa 3309913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 4959459 - 4959494
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  4959459 ggtataattgacaaatcatacccttaaaataccaaa 4959494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 27746479 - 27746444
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  27746479 ggtataattgacaaatcatacccttaaaataccaaa 27746444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 31741958 - 31741919
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagtttt 262  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  31741958 caaacttgaatttttcaaatatataacattaattagtttt 31741919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 33024445 - 33024390
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||| || |||||| ||||||| ||||||||||||||||||||||| |||||||    
T  33024445 actcattttgtttataaaattttaactattcatgaaaccattattataggtaacaa 33024390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 37814594 - 37814535
Alignment:
Q  225 aactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||| ||||| ||||| |||  ||| |||||||||||||||||||||||||||||||    
T  37814594 aactttagttttttaaatagatagaatttattagttttattgaaaaagataagagtaatt 37814535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 4700975 - 4701037
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||| |||| ||||||||||  |||||||| |||||||||||| ||||||||||||| |||||    
T  4700975 tttagttttccaaatatatagtattaattaattttattgaaaacgataagagtaattgacaaa 4701037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 37360407 - 37360345
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggta 295  Q
    ||||| ||||| | ||||||||||||||||| ||||||| |||||||||||| | ||||||||    
T  37360407 ttttttaaatagacaacattaattagttttagtgaaaaatataagagtaattgagaaagggta 37360345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 31193853 - 31193808
Alignment:
Q  227 ctttaatttttcaaatatataacattaattagttttattgaaaaag 272  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  31193853 ctttaattttccaaataaataatattaattagttttattgaaaaag 31193808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 361
Target Start/End: Complemental strand, 42756800 - 42756767
Alignment:
Q  328 tataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||    
T  42756800 tataattgacaaatcatacccttaaaataccaaa 42756767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 11073993 - 11074038
Alignment:
Q  250 attaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  11073993 attaattagtttta--gaaaaagataagagtaattgacaaagggtata 11074038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 12411728 - 12411668
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||| |||||||||||||||    |||||||||||||||||||| |||||| |||||    
T  12411728 aaactttagtttttcaaatatatagttataattagttttattgaaaaatataagaataatt 12411668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 12423788 - 12423728
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||| |||||||||||||||    |||||||||||||||||||| |||||| |||||    
T  12423788 aaactttagtttttcaaatatatagttataattagttttattgaaaaatataagaataatt 12423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 36243925 - 36243977
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaa 165  Q
    |||||||||||||||| ||||||| |||| |||||||| ||||||||| ||||    
T  36243925 actcatcttatttatagaattttaactatccatgaaactattattataggtaa 36243977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 13140908 - 13140958
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||||| |||||||| |||||||||||||||||| || |||||||||    
T  13140908 tttttcaaatagataacatttattagttttattgaaaaatat-agagtaatt 13140958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 14371154 - 14371205
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattag-ttttattgaaaaaga 273  Q
    ||||||| ||||||||||||| ||| |||||||||| |||||||||||||||    
T  14371154 caaacttgaatttttcaaatacatatcattaattagtttttattgaaaaaga 14371205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 34424785 - 34424856
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggt 294  Q
    ||||||||  |||| ||||||||||| ||||||||||||| |||||||| |||| | ||||  |||||||||    
T  34424785 caaacttttgttttccaaatatataatattaattagttttgttgaaaaatataataataatcgacaaagggt 34424856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 38589326 - 38589384
Alignment:
Q  239 aaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||| ||| ||||||||  |||||||||||||||||| ||||||| ||||| ||||||    
T  38589326 aaatagatagcattaattgattttattgaaaaagataaaagtaattgacaaatggtata 38589384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 41117498 - 41117444
Alignment:
Q  231 aatttttcaaatatataacattaattagttttattgaaaaaga-taagagtaatt 284  Q
    ||||||||||||| |||  |||||||||||||||||||||| | |||||||||||    
T  41117498 aatttttcaaatagatagtattaattagttttattgaaaaatagtaagagtaatt 41117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 2218273 - 2218236
Alignment:
Q  234 ttttcaaatatataacattaattagttttattgaaaaa 271  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  2218273 ttttcaaatagatatcattaattagttttattgaaaaa 2218236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 7486202 - 7486243
Alignment:
Q  115 tcatcttatttatataattttatctattcatgaaaccattat 156  Q
    |||||||||||||| ||||||| || ||||||||||||||||    
T  7486202 tcatcttatttatagaattttaactcttcatgaaaccattat 7486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 21925635 - 21925683
Alignment:
Q  383 cctttatcatttaaatagtgtaacaaacttgaaaaactatatttatactt 432  Q
    ||||||||||||||| ||||||||||||||||  || |||||||||||||    
T  21925635 cctttatcatttaaaaagtgtaacaaacttgatgaa-tatatttatactt 21925683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 13386502 - 13386443
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||| ||||||| ||| ||  ||||||||||||| ||||||||| ||||||||||||    
T  13386502 aaactttagtttttcagatacatggcattaattagttt-attgaaaaaaataagagtaatt 13386443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 20891314 - 20891359
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaa 270  Q
    ||||||||| |||| |||||||  ||||||||||||||||||||||||    
T  20891314 caaactttagttttccaaatat--aacattaattagttttattgaaaa 20891359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 39614913 - 39614839
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  39614913 caaactttaatttttcaaatatatagcattaattagttttgttgaaaaagataagagtaattaacaaaggatata 39614839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 1590230 - 1590163
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  1590230 caaactttagtttttcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaa 1590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 17202834 - 17202908
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  17202834 caaactttagttttccaaatagataacattaattagttttattgataaagataaaagtaattgacaaagggtata 17202908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 19924957 - 19924894
Alignment:
Q  234 ttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||    
T  19924957 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtata 19924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 17201306 - 17201240
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  17201306 aaactttagttttccaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaa 17201240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 32717988 - 32718062
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||| ||| | ||||||||||||    
T  32717988 caaactttagtttttcaaatatatagcattaattagtttaattgaaaaatataagaataactgacaaagggtata 32718062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 12436740 - 12436813
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||| || ||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  12436740 aaactgtagtttttcaaatagatagcattaattagttttattgaaaaatataagagtaattgacaaagcgtata 12436813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 290
Target Start/End: Complemental strand, 19931906 - 19931850
Alignment:
Q  234 ttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  19931906 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaa 19931850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 36194030 - 36194086
Alignment:
Q  225 aactttaatttttcaaatatataacattaattagttttattgaaaaagataagagta 281  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  36194030 aactttaatttttcaaatagataacattaattagtttgattcaaaaagataagagta 36194086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 14655008 - 14654941
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||| ||||| |||||    
T  14655008 caaactttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaa 14654941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 17591726 - 17591653
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||  ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  17591726 caaactttagttttccaaattgataacatta-ttagttttattgaaaaagataagagtaattaagaaatggtata 17591653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 20201716 - 20201658
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  20201716 aaactttagttttccaaatatataacattaattagttttattgaaaaatataaaagtaa 20201658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 11825449 - 11825498
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  11825449 ttttccaaatatacaacattaattagttttattgaaaaagataagagtaa 11825498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 19922207 - 19922163
Alignment:
Q  234 ttttcaaatatataacattaattagttttattgaaaaagataaga 278  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  19922207 ttttcaaatatataacatgaattagttttattgaaaaagataaga 19922163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 8544748 - 8544799
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  8544748 ttttccaaataaataacgttaattagttttattgaaaaagataagagtaatt 8544799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 32474257 - 32474179
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtatatttgg 302  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||| | | |||||||| | |||||||||| ||||    
T  32474257 caaactttaattttccaaatagatagcattaattagttttattgaaaaa-aaatgagtaattgataaagggtataattgg 32474179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 249549 - 249607
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||||||| |||| |||||||||| ||||||||||||||||| ||||||||| ||||||    
T  249549 aaactttagttttccaaatatatagcattaattagttttattaaaaaagataggagtaa 249607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 36246291 - 36246365
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||| | |||  ||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  36246291 caaactttagttttccaaacagatagtattcattagttttattgaaaaagataagagtaattgagaaagggtata 36246365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 1583538 - 1583481
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagta 281  Q
    |||||||| |||| |||||| ||| ||||||||||||||||||||||||| |||||||    
T  1583538 aaactttagttttccaaatagatagcattaattagttttattgaaaaagacaagagta 1583481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 19803708 - 19803665
Alignment:
Q  254 attagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||    
T  19803708 attagttttattgaaaaagataaaagtaattgacaaagggtata 19803665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 43346679 - 43346737
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||||||| ||||  ||||||||| ||||| ||||||||||| ||||||||||||||||    
T  43346679 aaactttagttttctaaatatatagcattacttagttttattaaaaaagataagagtaa 43346737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 6428317 - 6428276
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttat 264  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  6428317 caaactttaatttttcaaatagatagcattaattagttttat 6428276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 11992224 - 11992285
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||| |||| |||||| ||| ||||||||| ||||| |||||||||||| |||||||    
T  11992224 caaactttagttttccaaataaatagcattaattaattttactgaaaaagataaaagtaatt 11992285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 14654952 - 14654919
Alignment:
Q  329 ataattgacaaatcatacccttaaaataccaaag 362  Q
    ||||||||||||||||||||||||||||||||||    
T  14654952 ataattgacaaatcatacccttaaaataccaaag 14654919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 6434074 - 6434122
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaa 271  Q
    ||||||| ||||||||||||| |||| ||||||||| ||||||||||||    
T  6434074 caaacttaaatttttcaaatagataatattaattagatttattgaaaaa 6434122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 16365797 - 16365745
Alignment:
Q  238 caaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||||| || |||||||||||||||||||| |||||| ||||| |||||    
T  16365797 caaatatatagcactaattagttttattgaaaaatataagaataattgacaaa 16365745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 39584903 - 39584835
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaag 291  Q
    ||||||||| |||| |||||| |||| ||||||| ||||||| ||||||||||||| ||| ||| ||||    
T  39584903 caaactttagttttccaaatacataagattaattggttttatcgaaaaagataagaataactaagaaag 39584835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 17557968 - 17557933
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17557968 ggtataattgacaaatcatacccttaaaatatcaaa 17557933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 19803670 - 19803635
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||| ||||||||||||||||||    
T  19803670 ggtataattgacaaatcgtacccttaaaataccaaa 19803635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 294
Target Start/End: Complemental strand, 28620034 - 28619999
Alignment:
Q  259 ttttattgaaaaagataagagtaattaacaaagggt 294  Q
    |||||||||||||||||||||||||| |||||||||    
T  28620034 ttttattgaaaaagataagagtaattgacaaagggt 28619999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 34766340 - 34766305
Alignment:
Q  235 tttcaaatatataacattaattagttttattgaaaa 270  Q
    ||||||||||| ||||||||||||||||||||||||    
T  34766340 tttcaaatatacaacattaattagttttattgaaaa 34766305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 14967176 - 14967142
Alignment:
Q  239 aaatatataacattaattagttttattgaaaaaga 273  Q
    ||||| |||||||||||||||||||||||||||||    
T  14967176 aaatagataacattaattagttttattgaaaaaga 14967142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 36437381 - 36437423
Alignment:
Q  255 ttagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||||||||||||||| | ||||| ||||    
T  36437381 ttagttttattgaaaaagataagagtaattgataaaggatata 36437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 249423 - 249476
Alignment:
Q  115 tcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||| ||||||| || ||||| ||| |||||||||| |||||||    
T  249423 tcatcttatttataaaattttaactcttcataaaatcattattatatgtaacaa 249476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 20201644 - 20201611
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaatacca 359  Q
    |||||||||||||||| |||||||||||||||||    
T  20201644 ggtataattgacaaattatacccttaaaatacca 20201611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Complemental strand, 12659404 - 12659364
Alignment:
Q  450 aaacaactttttatataataaagactgttgttactgtcatt 490  Q
    |||||||||||| ||||||||||| |||||||| |||||||    
T  12659404 aaacaactttttttataataaagattgttgttagtgtcatt 12659364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 356
Target Start/End: Complemental strand, 17201236 - 17201208
Alignment:
Q  328 tataattgacaaatcatacccttaaaata 356  Q
    |||||||||||||||||||||||||||||    
T  17201236 tataattgacaaatcatacccttaaaata 17201208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 25496730 - 25496656
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25496730 caaactttagtttttcaaatagatagcattaattagttttattgaaaaagataaaagtaattaacaaagggtata 25496656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 7578211 - 7578285
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||||||||    
T  7578211 caaactttaattttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaagggtata 7578285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 14896710 - 14896632
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtatatttg 301  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  14896710 caaacttaagttttttaaatatataacattaattagttttattgaaaaagataagagtaattgacaaatgatatatttg 14896632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 40557290 - 40557218
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  40557290 aaactttagtttttcaaatttataacattaattagttt-attgaaaaagataagagtaatcaacaaagggtata 40557218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 9455315 - 9455241
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  9455315 caaactttattttttcaaatatatagcattaattagttttattgaaaaatataagaataattgacaaatggtata 9455241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 25400551 - 25400477
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  25400551 caaactttagttttccaaatagatagcattaattagttttattgaaaaggataaaagtaattaacaaagggtata 25400477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 16599382 - 16599455
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  16599382 aaactttagttttacaaatatatatcattaattagttttattgaaaaagataagagtaattgataaatggtata 16599455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 276
Target Start/End: Complemental strand, 34039079 - 34038919
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaacaannnnnnnnnnaacttttatgataacaataaacaaattttgttta 212  Q
    |||| ||||||||||| ||||||| ||||||||| || |||||||||| |||||||          || ||||| |||||||| ||||||| ||||||||    
T  34039079 actcgtcttatttatagaattttaactattcatggaatcattattataggtaacaaaattttatttaaattttaagataacaagaaacaaactttgttta 34038980  T
Q  213 agnnnnnnnncaaactttaatttttcaaatatataacattaattagttttattgaaaaagataa 276  Q
    |         ||||||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  34038979 a---aaaaaacaaactttaattttttaaatatataacattaactatttttattgaaaaagataa 34038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 41411469 - 41411541
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  41411469 aaactttagtttttcaaatttataactttaattagtttt-ttgaaaaagataagagtaatcaacaaagggtata 41411541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 2742941 - 2743008
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||| |||||    
T  2742941 caaactttaatttttcaaatatatagcattaattagttttattgaaaaatataaaaataattgacaaa 2743008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 5870835 - 5870769
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| ||||| |||||    
T  5870835 aaactttagtttttcaaatagataacattaattagttttattgaaaatgataagaataattgacaaa 5870769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 7695303 - 7695361
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaa 286  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  7695303 tttagtttttcaaatagataacattaactagttttattgaaaaagataagagtaattaa 7695361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 27231854 - 27231780
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| ||| ||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  27231854 caaactttagttttccaaatagatagcattaattagttttattgaaaaaaataagaataattaacaaagagtata 27231780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 32233709 - 32233635
Alignment:
Q  224 aaactttaatttttcaaatatataa-cattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| | || |||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32233709 aaactttagtgttccaaatagataagcattaattagttttattgaaaaagataagagtaattgacaaagggtata 32233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 34146264 - 34146190
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| | | |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  34146264 caaactttagttttccaaatagacatcattaattagttttattgaaaaagataagagtaattgacaaagagtata 34146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 39628293 - 39628354
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  39628293 caaactttagttttccaaatagataacattaattagttttattgaaaaaaataagagtaatt 39628354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 39637843 - 39637904
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  39637843 caaactttagttttccaaatagataacattaattagttttattgaaaaaaataagagtaatt 39637904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 36682637 - 36682579
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaat 283  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  36682637 aaactttagtttttcaaatatata-cattaattagttttattaaaaaagataagagtaat 36682579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 45083030 - 45083093
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaa 286  Q
    ||||| ||| |||| |||||| || |||||||||||||||||||||||||||||||||||||||    
T  45083030 caaacgttagttttccaaatacattacattaattagttttattgaaaaagataagagtaattaa 45083093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 38401646 - 38401580
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||||||||  ||||| ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  38401646 aaactttaattttcgaaataaataacattaattaattttattaaaaaagataagagtaattgacaaa 38401580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 3741712 - 3741656
Alignment:
Q  227 ctttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaat 283  Q
    ||||| |||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  3741712 ctttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaat 3741656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 3443733 - 3443788
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataaga 278  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  3443733 caaactttagtttttcaaatatatagcattaattagtttgattgaaaaaaataaga 3443788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 16393785 - 16393718
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||| |||| |||||| ||| |||||||||||||||||||||||| ||| ||||||| |||||    
T  16393785 caaactttagttttccaaatagatagcattaattagttttattgaaaaagctaaaagtaattgacaaa 16393718  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 29315875 - 29315934
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaat 283  Q
    |||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||||||||    
T  29315875 aaactttagttttccaaatatatagcattacttagttttattaaaaaagataagagtaat 29315934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 1530599 - 1530665
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||  |||||||||| ||| ||||||| ||||||||||||||| |||||||||||| |||||    
T  1530599 aaactttaggttttcaaatagatagcattaatcagttttattgaaaaaaataagagtaattgacaaa 1530665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 38457352 - 38457299
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataa 276  Q
    ||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||    
T  38457352 caaactttagttttccaaatagatagcattaattagttttattgaaaaagataa 38457299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 4418648 - 4418577
Alignment:
Q  225 aactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||| |||| |||||||||| ||||||||||||||||| |||||||| || |||||| |||||| |||||    
T  4418648 aactttagttttccaaatatatagcattaattagttttatt-aaaaagatgagggtaattgacaaagagtata 4418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 30887894 - 30887938
Alignment:
Q  248 acattaattagttttattgaaaaagataagagtaattaacaaagg 292  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  30887894 acattaattagttttattaaaaaagataagagtaattgacaaagg 30887938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 44666214 - 44666262
Alignment:
Q  249 cattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  44666214 cattaattagttttattgaaaaagataagagaaattgagaaagggtata 44666262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 1358789 - 1358844
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||| ||| ||||||| ||||||||| ||||||||||||| |||||||    
T  1358789 actcatcttattcatagaattttaactattcatggaaccattattataggtaacaa 1358844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 43026703 - 43026754
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||||||| |||||||||||| ||||||||||||| |||||| |||||    
T  43026703 tttttcaaatatgtaacattaattaattttattgaaaaatataagaataatt 43026754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 27166723 - 27166769
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaa 270  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||    
T  27166723 aaacttgaatttttcaaacgtataacattaattagttttattgaaaa 27166769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 43026562 - 43026612
Alignment:
Q  118 tcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    ||||||||||| ||||||| || |||||||||||||| |||||||||||||    
T  43026562 tcttatttatagaattttaactcttcatgaaaccattcttataagtaacaa 43026612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 1256734 - 1256802
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaaggg 293  Q
    |||||||||||||  ||||| || |||||||||| |||||||  ||||||||||||||||| ||||||||    
T  1256734 aaactttaattttctaaatagatgacattaattaattttatt-taaaagataagagtaattgacaaaggg 1256802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 3443802 - 3443837
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||| ||||||||||||||||||||    
T  3443802 ggtataattgacaaaacatacccttaaaataccaaa 3443837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 11087198 - 11087147
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||||| | || |||||||| ||||||||| ||||||||||||||||    
T  11087198 tttttcaaatagacaatattaattaattttattgagaaagataagagtaatt 11087147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 32233640 - 32233605
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||||| |||||||||||||||||    
T  32233640 ggtataattgacaaatcacacccttaaaataccaaa 32233605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 361
Target Start/End: Original strand, 1530668 - 1530702
Alignment:
Q  327 gtataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||| ||||||||||||||||||    
T  1530668 gtataattgacaaatcgtacccttaaaataccaaa 1530702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 4418581 - 4418547
Alignment:
Q  327 gtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||| |||||||||||    
T  4418581 gtataattgacaaatcataccctcaaaataccaaa 4418547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 34146194 - 34146160
Alignment:
Q  327 gtataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||| ||||||||||||||||||    
T  34146194 gtataattgacaaatcgtacccttaaaataccaaa 34146160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 34870566 - 34870612
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaa 270  Q
    |||||| |||||| |||||| |||||||||||||| |||||||||||    
T  34870566 aaacttgaattttccaaatacataacattaattaggtttattgaaaa 34870612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 3741843 - 3741790
Alignment:
Q  115 tcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||| ||||||| || ||||| ||| |||||||||| |||||||    
T  3741843 tcatcttatttatagaattttaactcttcataaaatcattattatatgtaacaa 3741790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 361
Target Start/End: Original strand, 7695369 - 7695402
Alignment:
Q  328 tataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||| ||||||||||||||||||    
T  7695369 tataattgacaaatcgtacccttaaaataccaaa 7695402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 1358940 - 1358984
Alignment:
Q  249 cattaattagttttattgaaaaagataagagtaattaacaaaggg 293  Q
    ||||||||||||||| |||||||||| ||||||||| | ||||||    
T  1358940 cattaattagttttaatgaaaaagattagagtaattgataaaggg 1358984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 1358986 - 1359018
Alignment:
Q  329 ataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||||||||||||||| ||||    
T  1358986 ataattgacaaatcatacccttaaaatatcaaa 1359018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 2742997 - 2743025
Alignment:
Q  329 ataattgacaaatcatacccttaaaatac 357  Q
    |||||||||||||||||||||||||||||    
T  2742997 ataattgacaaatcatacccttaaaatac 2743025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 4418914 - 4418958
Alignment:
Q  249 cattaattagttttattg-aaaaagataagagtaattaacaaagg 292  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||    
T  4418914 cattaattagttttattgaaaaaaaataagagtaattgacaaagg 4418958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 28226626 - 28226553
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  28226626 aaactttagtttttcaaatatataacattaattagttttattgaaaaagataagagcaattgacaaaaggtata 28226553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 2798684 - 2798623
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2798684 caaactttagtttttcaaatatatagcattaattagttttattgaaaaagataagagtaatt 2798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 10535017 - 10535090
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  10535017 aaactttaatttttcaaatagattacattaattagttttattgaaaaagataagaggaattgacaaaaggtata 10535090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 36412845 - 36412917
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  36412845 aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaataaacaaagggtata 36412917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 2273520 - 2273594
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||| |||||| |||||    
T  2273520 caaactttagttttccaaatatatagcattaataagttttattgaaaaagataagagtaattgacaaagcgtata 2273594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 10026226 - 10026291
Alignment:
Q  227 ctttaatttttcaaatat--ataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  10026226 ctttagtttttcaaatatatataacattaattagttttattgaaaaagataagagtaattaacaaa 10026291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 27723369 - 27723295
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||| | ||| ||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  27723369 caaactttaatttttcaaacagatagcattaattagttttactgaaaaagataaaagtaattaacaaagagtata 27723295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 15643413 - 15643340
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  15643413 aaactttagttttccaaatatatagcattaattagttttattgaaaaaaataagagtaattgataaagggtata 15643340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 35793119 - 35793192
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| ||| |||| |||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35793119 aaacattagttttccaaatagacaacattaattagttttattgaaaaagataagagtaattgacaaagggtata 35793192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 37124251 - 37124179
Alignment:
Q  225 aactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||| |||| |||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37124251 aactttagttttccaaatagagagcattaattagttttattgaaaaagataagagtaatttacaaagggtata 37124179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 43368863 - 43368791
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtat 296  Q
    |||||||| |||| |||||||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||    
T  43368863 aaactttagttttccaaatatataactttaattagttttatttaaaaagataaaagtaattgacaaagggtat 43368791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 297
Target Start/End: Original strand, 4962831 - 4963018
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaacaannnnnnnnnnaacttttatgataacaataaacaaattttgttt- 211  Q
    |||||| ||||||||| ||||||| || |||||||||| ||||| ||| |||||||          || ||| | ||||||||||||||||||||||||     
T  4962831 actcatgttatttatagaattttaactcttcatgaaactattatcataggtaacaaaattttgtttaaatttgaagataacaataaacaaattttgtttt 4962930  T
Q  212 --aagnnnnnnnncaaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
      ||         ||||||||| ||||||||||||||| || |||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  4962931 aaaacaaaacaaacaaactttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgacaaaaggtata 4963018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 39430609 - 39430683
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||| |||||| ||||| |||||| |||||    
T  39430609 caaactttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgacaaagagtata 39430683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 39599698 - 39599772
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattg-aaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||||||||||||| |||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  39599698 aaactttagtttttcaaatatatagcattaattagttttatcgaaaaaagataagagtaattgataaagggtata 39599772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 25290699 - 25290632
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||| |||||| ||||| |||||    
T  25290699 caaactttagtttttcaaatatacgacattaattagttttattgaaaaatataagaataattgacaaa 25290632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 16196864 - 16196791
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| ||| || ||||||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  16196864 caaactttagttttccaattagataacatcaattagttttattgaaaaagataagagtaa-tgacaaagggtata 16196791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 24394233 - 24394307
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||||||| ||||| ||||||||||| ||||| ||||||||| || ||||||||||||    
T  24394233 caaactttagttttccaaatatatatcattagttagttttattcaaaaatataagagtagttgacaaagggtata 24394307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 4567394 - 4567321
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| ||| || ||| |||||||||||||||||||||||||||| |||| || ||||||||||||    
T  4567394 aaactttagttttccaactagatagcattaattagttttattgaaaaagataaaagtagttgacaaagggtata 4567321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 4678479 - 4678434
Alignment:
Q  226 actttaatttttcaaatatataacattaattagttttattgaaaaa 271  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  4678479 actttagttttccaaatatataacattaattagttttattgaaaaa 4678434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 14735073 - 14735124
Alignment:
Q  234 ttttcaaatatataacattaattagttttattgaaaaagataagagtaattaa 286  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  14735073 ttttcaaattgataacatta-ttagttttattgaaaaagataagagtaattaa 14735124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 39427481 - 39427421
Alignment:
Q  223 caaactttaatttttcaaatatataacattaatt-agttttattgaaaaagataagagtaa 282  Q
    ||||||||| |||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  39427481 caaactttagttttccaaatatatagcattaatttagttttattaaaaaagataagagtaa 39427421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 39617601 - 39617549
Alignment:
Q  245 ataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||    
T  39617601 ataacattaattaattttattgaaaaagataaaagtaattgacaaaaggtata 39617549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 3835674 - 3835746
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| |||| |||||||||||  |||||||||||||||||| ||| ||| ||||||||    
T  3835674 caaactttagttttccaaatagataatattaattagtt--attgaaaaagataagagtgattgacagagggtata 3835746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 14771486 - 14771521
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  14771486 ggtataattgacaaatcatacccttaaaataccaaa 14771521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 15221938 - 15221973
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  15221938 ggtataattgacaaatcatacccttaaaataccaaa 15221973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 39432670 - 39432604
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||| ||||||||||||||| || |||| ||||||||||||||| |||| | ||||| |||||    
T  39432670 aaactttagtttttcaaatatatagcactaataagttttattgaaaaatataaaaataattgacaaa 39432604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 1752595 - 1752656
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||| ||||  ||||| |||| |||||||||||| |||||||||||||| |||||||    
T  1752595 caaactttagttttctaaatagataatattaattagtttgattgaaaaagataaaagtaatt 1752656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 8614843 - 8614903
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaa 289  Q
    |||| ||||||||||| |||||| |||||||||||||| ||||| |||||||||||| ||||    
T  8614843 tttagtttttcaaatagataacaataattagttttatt-aaaaaaataagagtaattgacaa 8614903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 3835741 - 3835776
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3835741 ggtataattgacaaatcgtacccttaaaataccaaa 3835776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 4963013 - 4963048
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||| ||||||||||||||||||||||||    
T  4963013 ggtataattgataaatcatacccttaaaataccaaa 4963048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 35793187 - 35793222
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||||| |||||||||||||||||    
T  35793187 ggtataattgacaaatcacacccttaaaataccaaa 35793222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 44550084 - 44550049
Alignment:
Q  249 cattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||||||||| ||||||||||||||||||||    
T  44550084 cattaattagttttaatgaaaaagataagagtaatt 44550049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 356
Target Start/End: Original strand, 46672107 - 46672137
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaata 356  Q
    |||||||||||||||||||||||||||||||    
T  46672107 ggtataattgacaaatcatacccttaaaata 46672137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 7809204 - 7809277
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| | |||| |||  |||||||||||||||| |||||||||| ||||||| | ||| ||||||    
T  7809204 aaactttagttttcctaatacatagtattaattagttttatttaaaaagataaaagtaattgagaaatggtata 7809277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 39247325 - 39247369
Alignment:
Q  250 attaattagttttattgaaaaagataagagtaattaacaaagggta 295  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||    
T  39247325 attaattagttttattgaaaaa-ataagagtaatggacaaagggta 39247369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 29606104 - 29606064
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaaga 273  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  29606104 tttttcaaatagataacattaattagctttattaaaaaaga 29606064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 29747472 - 29747512
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaaga 273  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  29747472 tttttcaaatagataacattaattagctttattaaaaaaga 29747512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 39432615 - 39432587
Alignment:
Q  329 ataattgacaaatcatacccttaaaatac 357  Q
    |||||||||||||||||||||||||||||    
T  39432615 ataattgacaaatcatacccttaaaatac 39432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Complemental strand, 48103830 - 48103790
Alignment:
Q  450 aaacaactttttatataataaagactgttgttactgtcatt 490  Q
    |||||||||||| ||||||||||| |||||||| |||||||    
T  48103830 aaacaactttttctataataaagattgttgttagtgtcatt 48103790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 9089626 - 9089694
Alignment:
Q  227 ctttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggta 295  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  9089626 ctttaatttttcaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaagggta 9089694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 46195827 - 46195753
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  46195827 caaactttaatttttcaaattgataacattaattagttttactgaaaaagataaaagtaattgacaaagggtata 46195753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 45635461 - 45635534
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  45635461 aaactttagttttccaaatatataacattaattagttttattgaaaaatataagagtaattgacaaatggtata 45635534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 24074131 - 24074193
Alignment:
Q  235 tttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  24074131 tttcaaatagataacattaattagttttattgaaaaagttaagagtaattgacaaagggtata 24074193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 25490543 - 25490469
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||    
T  25490543 caaactttagttttccaaatatataacattaattatttttattgaaaatgataagagtaattgacaaatggtata 25490469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 50720980 - 50720906
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  50720980 caaacttttgtttttcaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaatggtata 50720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 25493906 - 25493845
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  25493906 caaactttagttttccaaatagataacattaattagttttattgaaaaagataagagtaatt 25493845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 33808946 - 33808885
Alignment:
Q  231 aatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagg 292  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  33808946 aatttttcaaatatataacattaattaattttattgaaaaatgtaagagtaattaacaaagg 33808885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 668035 - 668094
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  668035 caaactttagttttccaaatatataacattaattagttttatttaaaaagataagagtaa 668094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 41502618 - 41502560
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  41502618 aaactttagtttttcaaatatataacattaattaattttattaaaaaagataagagtaa 41502560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 45666380 - 45666306
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||| |||||| |||  |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  45666380 caaactttaattttccaaatagatattattaataagttttattgaaaaagataaaagtaattgacaaagggtata 45666306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 24538312 - 24538381
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagg 292  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||    
T  24538312 caaactttagttttccaaatatataacactaattagttttattgaaaaatataagaataattgacaaagg 24538381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 34032006 - 34032079
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||  ||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34032006 aaactttagttttctaaatagataatattaattagttttattgaaaaagataaaactaattaacaaagggtata 34032079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 38434244 - 38434317
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||| |||||| ||||| | ||||||||||    
T  38434244 aaactttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgataaagggtata 38434317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 2492923 - 2492863
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  2492923 aaactttagtttttcaaatagatagcattaattagttttattaaaaaagataagagtaatt 2492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 19443577 - 19443651
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||||| |||  |||| ||||||||| | |||||||||| ||||||| ||||||||||||    
T  19443577 caaactttaatttttcaaatagatagtattacttagttttactaaaaaagataaaagtaattgacaaagggtata 19443651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 21956486 - 21956544
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagta 281  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  21956486 caaactttagtttttcaaataggtaatattaattagttttattgaaaaagataagagta 21956544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 37209992 - 37210066
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| ||| |||| ||||||||||||||||||||||| | ||||| ||||||||||||    
T  37209992 caaactttagttttccaaatagatagcattgattagttttattgaaaaagataaaaataattgacaaagggtata 37210066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 37371413 - 37371486
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||  ||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| ||||||||||||    
T  37371413 caaactttggtttttcaaatatatatcattaat-agttttattgaaaaatataagaataattgacaaagggtata 37371486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 6949146 - 6949098
Alignment:
Q  249 cattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6949146 cattaattagttttattgaaaaagataagagtaattgacaaatggtata 6949098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 33889677 - 33889622
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaat 283  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  33889677 tttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaat 33889622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 38840424 - 38840498
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||| ||| ||||||||||||||| | |||||||||| |||||||  |||||| ||||    
T  38840424 caaactttagtttttcaaatagatagcattaattagttttactaaaaaagataaaagtaattgtcaaaggatata 38840498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 49263062 - 49263016
Alignment:
Q  238 caaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  49263062 caaatagatatcattaattagttttattgaaaaagataagagtaatt 49263016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 49299869 - 49299943
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattg-aaaaagataagagtaattaacaaagggtata 297  Q
    ||||| || ||||||||||| |||||||| ||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  49299869 aaactgtagtttttcaaatagataacattgattagttatattgaaaaaaaataaaagtaattaacaaagggtata 49299943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 54982762 - 54982836
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| ||| ||||| |||||||||||||||| ||||| ||||||| |||||| |||||    
T  54982762 caaactttagttttccaaatagatagcattagttagttttattgaaaaggataaaagtaattgacaaagagtata 54982836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 30913612 - 30913540
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||  ||||||||||| ||||||||||||||||||||| |||| ||||||| | ||||||||||    
T  30913612 aaactttagttttcgaaatatataacgttaattagttttattgaaaaacataa-agtaattgataaagggtata 30913540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 30913733 - 30913680
Alignment:
Q  115 tcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||    
T  30913733 tcatcttatttatagaattttaactattcatgaaactattattataggtaacaa 30913680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 17330840 - 17330805
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  17330840 ggtataattgacaaatcatacccttaaaataccaaa 17330805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 290
Target Start/End: Original strand, 21342249 - 21342284
Alignment:
Q  255 ttagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||||||||||||||||||||||||||||||    
T  21342249 ttagttttattgaaaaagataagagtaattaacaaa 21342284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 46016623 - 46016662
Alignment:
Q  251 ttaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  46016623 ttaattagtttgattgaaaaagataagagtaattaacaaa 46016662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 290
Target Start/End: Complemental strand, 46250094 - 46250055
Alignment:
Q  251 ttaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  46250094 ttaattagtttgattgaaaaagataagagtaattaacaaa 46250055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 1821597 - 1821655
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||||||| |||||| ||| ||||||||||||||| |||||||| ||| |||||    
T  1821597 aaactttaattttccaaatagatatcattaattagttttactgaaaaaggtaaaagtaa 1821655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 2684756 - 2684687
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaaggg 293  Q
    ||||||||| |||| |||||| ||| |||| ||  ||||||||||||||||||||||||||||| ||||||    
T  2684756 caaactttagttttccaaatagatagcatttatc-gttttattgaaaaagataagagtaattaagaaaggg 2684687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 30912806 - 30912753
Alignment:
Q  115 tcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||| ||| ||||||| |||||||||||||||||||| || |||||||    
T  30912806 tcatcttattgatagaattttaactattcatgaaaccattattgtaggtaacaa 30912753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 42219055 - 42219092
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaa 270  Q
    |||| |||||||||||||||||||||||||||||||||    
T  42219055 ttttccaaatatataacattaattagttttattgaaaa 42219092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 47944463 - 47944516
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataa 276  Q
    ||||||||||||||  ||||| ||| ||||||| ||||||||||||||||||||    
T  47944463 caaactttaattttctaaatagatagcattaataagttttattgaaaaagataa 47944516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 38045483 - 38045419
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||||| ||| ||||||||| ||||||||||| | |||||||||||| | ||||||||||    
T  38045483 ttttccaaatagatagcattaattacttttattgaaagatataagagtaattgataaagggtata 38045419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 23529596 - 23529521
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattga-aaaagataagagtaattaacaaagggtata 297  Q
    |||| |||| |||| |||||| ||| ||||||||||||||||||| ||||||||| ||||||| | ||| ||||||    
T  23529596 caaattttagttttccaaataaatagcattaattagttttattgaaaaaagataaaagtaattgagaaaaggtata 23529521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 361
Target Start/End: Original strand, 24538385 - 24538416
Alignment:
Q  330 taattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||    
T  24538385 taattgacaaatcatacccttaaaataccaaa 24538416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 37210061 - 37210096
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||| |||||||||||||||||||    
T  37210061 ggtataattgacaaattatacccttaaaataccaaa 37210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 46196822 - 46196869
Alignment:
Q  244 tataacattaattagttttattg-aaaaagataagagtaattaacaaa 290  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  46196822 tataacattaattagttttattgaaaaaatataagagtaattgacaaa 46196869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 53370277 - 53370328
Alignment:
Q  117 atcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||| ||||||| ||||||| | ||||||||||||| |||||||    
T  53370277 atcttatttatagaattttaactattcaagtaaccattattataggtaacaa 53370328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 53393380 - 53393345
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||||||| |||||||||||||||    
T  53393380 ggtataattgacaaatcatatccttaaaataccaaa 53393345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 20782548 - 20782475
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| ||| ||||| |||||  || |||| |||||||||||||||||| |||||||||||| | |||| |||||    
T  20782548 aaacattagttttttaaataggtagcatttattagttttattgaaaaatataagagtaattgagaaagtgtata 20782475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 276
Target Start/End: Original strand, 27650852 - 27650885
Alignment:
Q  243 atataacattaattagttttattgaaaaagataa 276  Q
    |||||||||||||||||||||||||||| |||||    
T  27650852 atataacattaattagttttattgaaaatgataa 27650885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 38044944 - 38044996
Alignment:
Q  238 caaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||| |||| |||||||| ||||||||||||| ||||||| |||| |||||    
T  38044944 caaatagataatattaattaattttattgaaaaatataagagaaattgacaaa 38044996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Complemental strand, 47931405 - 47931365
Alignment:
Q  450 aaacaactttttatataataaagactgttgttactgtcatt 490  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  47931405 aaacaactttttatataataaagattgttgttggtgtcatt 47931365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 53370430 - 53370482
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataa 276  Q
    |||||||| ||||  ||||||||| |||||| ||| |||||||||||||||||    
T  53370430 aaactttagttttcaaaatatatagcattaactagatttattgaaaaagataa 53370482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 9e-22; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 54675189 - 54675261
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  54675189 aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagggtata 54675261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 633291 - 633359
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagg 292  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  633291 aaactttagttttccaaatatataacattaattagttttattgaaaatgataagagtaattgacaaagg 633359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 5493622 - 5493558
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5493622 tttttcaaatagacaacattaattagttttattgaaaaagataagagtaattgacaaagggtata 5493558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 9588824 - 9588750
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||    
T  9588824 caaactttagttttccaaatatataacattaattagtttttttgaaaaagatattagtaattgacaaagggtata 9588750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 45646679 - 45646605
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  45646679 caaactttagtttttcaaatagatagcattaattagttttattgaaaaagaaaaaagtaattgacaaagggtata 45646605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 45759959 - 45760033
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||| ||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  45759959 caaacattagtttttcaaatagatagcattaattagttttattgagaaagataagagtaattgacaaagggtata 45760033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 20141017 - 20141090
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||| | ||| ||||||    
T  20141017 aaactttaattttttaaatacataacattaatttgttttattgaaaaagataagagtaattgagaaaaggtata 20141090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 19187671 - 19187731
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaat 283  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  19187671 caaactttaatttttcaaatatatatcattaattagttttattgaaaaaaataagtgtaat 19187731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 44940873 - 44940932
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||    
T  44940873 caaactttaatttttcaaatatatagcattaattagttttattaaaaaagataaaagtaa 44940932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 1272489 - 1272431
Alignment:
Q  239 aaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  1272489 aaatatatagcattaattagttttattgaaaaatataagagtaattgacaaagggtata 1272431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 19578395 - 19578337
Alignment:
Q  239 aaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  19578395 aaatatataacattaattagttttattgaaaaagacaagagcaattgacaaagggtata 19578337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 25841940 - 25842013
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtat 296  Q
    |||| |||| |||| |||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  25841940 caaattttagttttccaaatatatagcattaattagttttattgaaaaatataagattaattgacaaagggtat 25842013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 19234007 - 19234071
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  19234007 ttttccaaatatatagcattaattttttttattgaaaaagataagagtaattgacaaagggtata 19234071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 9588954 - 9588899
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  9588954 actcatcttatttatataattttaactattcatgaaatcattattataggtaacaa 9588899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 21934489 - 21934548
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  21934489 caaactttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaa 21934548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 296513 - 296439
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattg-aaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||||||| ||| |||||||||||| | |||||||||||||||||| ||||||||||||    
T  296513 aaactttagttttccaaatatatagcataaattagttttatagaaaaaagataagagtaattgacaaagggtata 296439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 2093854 - 2093781
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| ||||||||||| ||| ||||||||| ||| | |||||||||||| ||||||| ||||||||||||    
T  2093854 aaactttagtttttcaaatagatagcattaattaatttgactgaaaaagataaaagtaattgacaaagggtata 2093781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 25342389 - 25342458
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||| |||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||| ||||    
T  25342389 tttagttttccaaatatataacattaattagttttattaaaaacgataaaagtaattgacaaaggatata 25342458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 25479668 - 25479619
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaag 272  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  25479668 caaacttaaatttttcaaatatataacattaattagtttgattgaaaaag 25479619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 23272128 - 23272072
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||||| |||||    
T  23272128 tttaattttttaaatatatagcattaatttgttttattgaaaaagataagaataatt 23272072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 23772250 - 23772313
Alignment:
Q  224 aaactttaatttttcaaatat--ataacattaattagttttattgaaaaagataagagtaatta 285  Q
    |||||||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||||    
T  23772250 aaactttagtttttcaaatatatataacatttattagttttattgaaaaatataagagtaatta 23772313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 375827 - 375758
Alignment:
Q  223 caaactttaatttttcaaatatataa--cattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||| ||||||||| |||||||||||  ||||||||| ||||||| |||||||||||||||||| |||||    
T  375827 caaaatttaattttccaaatatataaagcattaattaattttattaaaaaagataagagtaattgacaaa 375758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 27264192 - 27264118
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||  |||| |||| | ||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  27264192 caaactttgtttttccaaaaagatagcattaattaattttattgaaaaagataagagtaattgacaaatggtata 27264118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 2440658 - 2440730
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||||||||||||||  |||||||| |||||||| ||||||||| | ||||| ||||||||||||    
T  2440658 aaactttagtttttcaaatatatataattaattaattttattg-aaaagataaaactaattgacaaagggtata 2440730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 7259721 - 7259778
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||| |||||||||| ||||||||||||||||||||||| |||||| ||||| |||||    
T  7259721 ttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaa 7259778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 3751652 - 3751600
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaa 165  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||| ||||    
T  3751652 actcatcttatttatagaattttaactcttcatgaaaccattattataggtaa 3751600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 20841395 - 20841326
Alignment:
Q  226 actttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||||| |||  ||||||| ||||| ||||||    
T  20841395 actttagtttttcaaatagatagcattaattagttttattgaaaaaaata--agtaattgacaaatggtata 20841326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 23701951 - 23702014
Alignment:
Q  224 aaactttaatttttcaaatat--ataacattaattagttttattgaaaaagataagagtaatta 285  Q
    |||||||| ||||||||||||  |||||||| |||||||||||||||||| |||| ||||||||    
T  23701951 aaactttagtttttcaaatatatataacatttattagttttattgaaaaatataaaagtaatta 23702014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 23720407 - 23720470
Alignment:
Q  224 aaactttaatttttcaaatat--ataacattaattagttttattgaaaaagataagagtaatta 285  Q
    |||||||| ||||||||||||  |||||||| |||||||||||||||||| |||| ||||||||    
T  23720407 aaactttagtttttcaaatatatataacatttattagttttattgaaaaatataaaagtaatta 23720470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 23738863 - 23738926
Alignment:
Q  224 aaactttaatttttcaaatat--ataacattaattagttttattgaaaaagataagagtaatta 285  Q
    |||||||| ||||||||||||  |||||||| |||||||||||||||||| |||| ||||||||    
T  23738863 aaactttagtttttcaaatatatataacatttattagttttattgaaaaatataaaagtaatta 23738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 29556509 - 29556569
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaatt 284  Q
    |||||||  ||||||||||| | ||||||  ||||||||||||||||||||||||||||||    
T  29556509 aaacttttgtttttcaaatagagaacatttgttagttttattgaaaaagataagagtaatt 29556569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 34668793 - 34668687
Alignment:
Q  188 gataacaataaacaaattttgtttaagnnnnnnnncaaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaac 287  Q
    |||||||| ||||||||||||||||||        || |||||| |||| |||||| ||| ||||||||||||||||| ||||| | || ||||||| ||    
T  34668793 gataacaaaaaacaaattttgtttaagaaaaa---catactttagttttccaaatagatagcattaattagttttattcaaaaaaaaaaaagtaattgac 34668697  T
Q  288 aaagggtata 297  Q
    ||||||||||    
T  34668696 aaagggtata 34668687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 15638386 - 15638441
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||  | ||||||| ||||||||||||||||||||||| |||||||    
T  15638386 actcatcttattttaagaattttaactattcatgaaaccattattataggtaacaa 15638441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 37030988 - 37031047
Alignment:
Q  238 caaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||| ||| |||||||||||||||||||||||| ||| |||||||  |||||||||||    
T  37030988 caaatagatagcattaattagttttattgaaaaagctaaaagtaattggcaaagggtata 37031047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 3751538 - 3751492
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaa 269  Q
    |||||||||  ||| ||||||||||||||||||||||||||||||||    
T  3751538 caaactttaggtttccaaatatataacattaattagttttattgaaa 3751492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 6512462 - 6512516
Alignment:
Q  114 ctcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    ||||||||||||||| ||| ||| || |||||||||||||||||||| |||||||    
T  6512462 ctcatcttatttataaaatgttaactcttcatgaaaccattattataggtaacaa 6512516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 15772343 - 15772305
Alignment:
Q  231 aatttttcaaatatataacattaattagttttattgaaa 269  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  15772343 aatttttcaaatagataacattaattagttttattgaaa 15772305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 16237600 - 16237661
Alignment:
Q  229 ttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||| |||||| ||| |||||||||| |||||||||||| |||| ||||||| |||||    
T  16237600 ttaattttccaaatagatagcattaattagctttattgaaaaatataatagtaattgacaaa 16237661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 25485879 - 25485838
Alignment:
Q  231 aatttttcaaatatataacattaattagttttattgaaaaag 272  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  25485879 aattttccaaatatataacatcaattagttttattgaaaaag 25485838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 29556422 - 29556474
Alignment:
Q  116 catcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    ||||||||||||| ||||| | ||||||||||||||||||||| | |||||||    
T  29556422 catcttatttatagaatttcaactattcatgaaaccattattaaaggtaacaa 29556474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 38416358 - 38416402
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattga 267  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||    
T  38416358 caaacttgaatttttcaaatggataacattaattagttttattga 38416402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 296444 - 296409
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||| ||||||||||||||||||||||||||||    
T  296444 ggtataactgacaaatcatacccttaaaataccaaa 296409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 296642 - 296595
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattata 160  Q
    |||||||||||||||| ||||||| ||||||||  |||||||||||||    
T  296642 actcatcttatttatagaattttaactattcatagaaccattattata 296595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 2093786 - 2093751
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2093786 ggtataattgacaaatcatacccttaaaatatcaaa 2093751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 5493563 - 5493528
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5493563 ggtataattgacaaatcgtacccttaaaataccaaa 5493528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 10614653 - 10614618
Alignment:
Q  249 cattaattagttttattgaaaaagataagagtaatt 284  Q
    ||||||||||||||| ||||||||||||||||||||    
T  10614653 cattaattagttttaatgaaaaagataagagtaatt 10614618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 20841331 - 20841296
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||| ||||||||||||||||||    
T  20841331 ggtataattgacaaatcgtacccttaaaataccaaa 20841296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 21959700 - 21959762
Alignment:
Q  234 ttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||||||||||| |||||||||||| || |||| |||||| ||||| ||||||||||||    
T  21959700 ttttaaaatatataacactaattagttttaatg-aaaatataagaataattgacaaagggtata 21959762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 21959757 - 21959792
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||| ||||||||||||||||||||||||    
T  21959757 ggtataattgataaatcatacccttaaaataccaaa 21959792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 45667535 - 45667468
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||||||  |||| |||||| ||| ||||||||| |||||||||||||||| | ||||||| |||||    
T  45667535 caaactttcgttttccaaatagatagcattaattaattttattgaaaaagatcaaagtaattgacaaa 45667468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 27817495 - 27817422
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| ||||||||||| | |  ||| ||||||||||||||||||||||| | ||||| ||||| ||||||    
T  27817495 caaactttagtttttcaaatagagagaattcattagttttattgaaaaagataa-aataattgacaaaaggtata 27817422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 38751097 - 38751151
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||| |||| |||||||||| ||||| ||||||||||| ||||||| ||||||||    
T  38751097 tttagttttccaaatatatagcattacttagttttattaaaaaagacaagagtaa 38751151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Complemental strand, 5907378 - 5907338
Alignment:
Q  450 aaacaactttttatataataaagactgttgttactgtcatt 490  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  5907378 aaacaactttttatataataaagattgttgttggtgtcatt 5907338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 7259767 - 7259799
Alignment:
Q  329 ataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||||||||||||||| ||||    
T  7259767 ataattgacaaatcatacccttaaaatatcaaa 7259799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Original strand, 14899896 - 14899936
Alignment:
Q  450 aaacaactttttatataataaagactgttgttactgtcatt 490  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  14899896 aaacaactttttatataataaagattgttgttggtgtcatt 14899936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 358
Target Start/End: Original strand, 25842009 - 25842041
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaatacc 358  Q
    ||||| |||||||||||||||||||||||||||    
T  25842009 ggtatgattgacaaatcatacccttaaaatacc 25842041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 9e-22; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 1674777 - 1674846
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagg 292  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  1674777 caaactttagtttttcaaatatataacattaattagttttattgaaaaatataagaataattgacaaagg 1674846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 2655792 - 2655719
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  2655792 aaactttagttttccaaatatataacattaattagttttattgaaaaatataagagtaattgacaaatggtata 2655719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 3901100 - 3901028
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  3901100 aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagggtata 3901028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 50488770 - 50488842
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  50488770 aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagggtata 50488842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 52415020 - 52414961
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  52415020 caaactttagttttccaaatatataacattaattagttttattaaaaaagataagagtaa 52414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 788293 - 788367
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| || ||| ||||| ||||| ||||||    
T  788293 caaactttatttttccaaatatataacattaattagttttattgaaaaatattagaataattgacaaatggtata 788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 10430530 - 10430604
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||| | |||| |||||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  10430530 caaacttgagttttgcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaatggtata 10430604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 36319977 - 36320051
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  36319977 caaacattagttttccaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaatggtata 36320051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 43021208 - 43021139
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||  |||| ||||||    
T  43021208 tttagtttttcaaatatataacattaattagttttattgataaatataagagtaattggcaaatggtata 43021139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 39157127 - 39157064
Alignment:
Q  235 tttcaaatatataacattaattagttttatt-gaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||||||    
T  39157127 tttcaaatatataacattaattagttctattaaaaaaaaataagagtaattaacaaagggtata 39157064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 40519207 - 40519266
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  40519207 caaactttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaa 40519266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 10101679 - 10101752
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||| |||| |||||| ||| ||||| |||||||||||||||||||||||||||||| | ||||||||||    
T  10101679 caaactttagttttccaaatagatagcatta-ttagttttattgaaaaagataagagtaattgagaaagggtata 10101752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 23699437 - 23699495
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  23699437 aaactttagttttccaaatatatagcattaattagttttattgaaaaagataagcgtaa 23699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 32769074 - 32769020
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataaga 278  Q
    |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  32769074 aaactttagtttttcaaatatatatcattaattagttttattaaaaaagataaga 32769020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 11238258 - 11238327
Alignment:
Q  228 tttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||| |||| |||||||||| ||||||||||||||||||||||| |||||| |||||  |||||||||||    
T  11238258 tttagttttccaaatatatatcattaattagttttattgaaaaatataagaataattgccaaagggtata 11238327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 13254768 - 13254841
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| || | |||||| ||| |||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  13254768 aaactttagttctccaaatagatagcattaattagttttattgaaaaagataagagtaattgataaaaggtata 13254841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 6295765 - 6295829
Alignment:
Q  233 tttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||| ||||| | ||||||||||||    
T  6295765 tttttcaaatagatagcattaattagttttatttaaaaagataaaagtaagtgacaaagggtata 6295829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 19269923 - 19269871
Alignment:
Q  113 actcatcttatttatataattttatctattcatgaaaccattattataagtaa 165  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  19269923 actcatcttatttatagaattttaactattcatgaaaccattattataggtaa 19269871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 30280117 - 30280058
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||| |||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  30280117 caaactttagttttccaaatatacaacattaattagttttattaaagaagataagagtaa 30280058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 52281798 - 52281747
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagat 274  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  52281798 caaactttagttttttaaatagataacattaattagttttattgaaaaagat 52281747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 39157174 - 39157128
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaa 269  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  39157174 caaactttagtttttcaaatatataacattaattagttctattgaaa 39157128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 4671498 - 4671439
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    |||| |||| |||| ||||||||||  |||||||||||||||| ||||||||||||||||    
T  4671498 caaattttagttttccaaatatatagtattaattagttttattaaaaaagataagagtaa 4671439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 31623135 - 31623193
Alignment:
Q  239 aaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||||||||||||||| |||||| |||||| |||||| ||||| | ||||||||||    
T  31623135 aaatatataacattaattaattttatggaaaaatataagaataattgataaagggtata 31623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 39386772 - 39386701
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||| ||   |||||||||||  |||||||||||||||||||||| ||||||||||||    
T  39386772 aaactttatttttccaaatagattgtattaattagtt--attgaaaaagataagagtaattgacaaagggtata 39386701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 361
Target Start/End: Complemental strand, 52414923 - 52414890
Alignment:
Q  328 tataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||    
T  52414923 tataattgacaaatcatacccttaaaataccaaa 52414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 21535845 - 21535892
Alignment:
Q  243 atataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    ||||| ||||||||||||||||||||||| |||||| ||||| |||||    
T  21535845 atatagcattaattagttttattgaaaaatataagaataattgacaaa 21535892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 23698817 - 23698770
Alignment:
Q  250 attaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||| ||||| |||||||||||| ||||||| ||||    
T  23698817 attaattagttttatttaaaaatataagagtaattgacaaaggatata 23698770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 49035336 - 49035289
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaa 271  Q
    |||||| ||||||||||||| ||||| || ||||||||||||||||||    
T  49035336 aaacttgaatttttcaaataaataactttgattagttttattgaaaaa 49035289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 13254836 - 13254870
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaa 360  Q
    ||||||||||||||||| |||||||||||||||||    
T  13254836 ggtataattgacaaatcgtacccttaaaataccaa 13254870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 21967191 - 21967237
Alignment:
Q  249 cattaattagttttattgaaaaagataagagtaattaacaaagggta 295  Q
    ||||||||||||||| |||||||||| ||||||||||| ||| ||||    
T  21967191 cattaattagttttaatgaaaaagatgagagtaattaagaaatggta 21967237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 32186590 - 32186544
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaa 270  Q
    |||||| |||||| |||||| ||||||||||||||||||||| ||||    
T  32186590 aaacttgaattttgcaaatacataacattaattagttttattaaaaa 32186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 490
Target Start/End: Complemental strand, 115942 - 115902
Alignment:
Q  450 aaacaactttttatataataaagactgttgttactgtcatt 490  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  115942 aaacaactttttatataataaagattgttgttggtgtcatt 115902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 1394745 - 1394797
Alignment:
Q  116 catcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    ||||||||| ||| ||||||| ||||||||||||| |||| |||| |||||||    
T  1394745 catcttattcatagaattttaactattcatgaaactattagtataggtaacaa 1394797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 21535881 - 21535913
Alignment:
Q  329 ataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||| |||||||||||||    
T  21535881 ataattgacaaatcatacctttaaaataccaaa 21535913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 23698870 - 23698834
Alignment:
Q  229 ttaatttttcaaatatataacattaattagttttatt 265  Q
    ||||||||  |||||||||||||||||||||||||||    
T  23698870 ttaattttctaaatatataacattaattagttttatt 23698834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 35274966 - 35275018
Alignment:
Q  116 catcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||  |||||| || || ||||||||||||||||| |||||||    
T  35274966 catcttatttatagcattttaactctttatgaaaccattattatatgtaacaa 35275018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 256824 - 256751
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  256824 aaactttagttttccaaatagataacattaattagttttattgaaaaagataagagaaattgacaaatggtata 256751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 272383 - 272457
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||||||||||| ||  |||  ||||||||||||||||| ||||| |||||| ||| ||| ||||    
T  272383 caaactttaatttttcaaatatgtagtattcgttagttttattgaaaaatataagtgtaattgacagaggttata 272457  T

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Target: scaffold1130 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 455 - 393
Alignment:
Q  234 ttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtat 296  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||    
T  455 ttttcaaatatataacattaattagttttattgaaaattataagaataattgacaaagggtat 393  T

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Target: scaffold0118 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 14997 - 14926
Alignment:
Q  225 aactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||||||| || |||||| ||||| ||||||    
T  14997 aactttagttttccaaatatataacattaattagttttattg-aaaagatgagggtaattgacaaaaggtata 14926  T

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Target: scaffold0118; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 14931 - 14896
Alignment:
Q  326 ggtataattgacaaatcatacccttaaaataccaaa 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  14931 ggtataattgacaaatcatacccttaaaataccaaa 14896  T

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Target: scaffold0118; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 15277 - 15309
Alignment:
Q  249 cattaattagttttattgaaaaagataagagta 281  Q
    ||||||||||||||||||||||| |||||||||    
T  15277 cattaattagttttattgaaaaaaataagagta 15309  T

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Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 6399 - 6472
Alignment:
Q  224 aaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||| |||| ||||||||||||| |||||| ||||||||||||| |||  ||||||| ||||||| ||||    
T  6399 aaactttagttttccaaatatataacaataattaattttattgaaaaacatagaagtaattgacaaaggatata 6472  T

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Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 6315 - 6358
Alignment:
Q  117 atcttatttatataattttatctattcatgaaaccattattata 160  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  6315 atcttatttatagaattttaactattcatgaaaccattattata 6358  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 46584 - 46650
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaa 290  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||||||  |||||| ||||| |||||    
T  46584 caaactttaatttt-caaatatatagcattaattaattttattgaaaattataagaataattgacaaa 46650  T

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Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 46639 - 46671
Alignment:
Q  329 ataattgacaaatcatacccttaaaataccaaa 361  Q
    |||||||||||||||||||||||||||||||||    
T  46639 ataattgacaaatcatacccttaaaataccaaa 46671  T

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Target: scaffold1327 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 952 - 878
Alignment:
Q  223 caaactttaatttttcaaatatataacattaattagttttattgaaaaagataagagtaattaacaaagggtata 297  Q
    |||||||||||||| ||| || ||| ||| ||||||||| |||||||||||||| ||||||| | ||| ||||||    
T  952 caaactttaattttccaactagatagcatcaattagtttcattgaaaaagataaaagtaattgagaaaaggtata 878  T

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Target: scaffold0242 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 14873 - 14823
Alignment:
Q  232 atttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||| |||||    
T  14873 atttttcaaatgtataatattaattagtttgattgaaaaagataaaagtaa 14823  T

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Target: scaffold0242; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 23708 - 23658
Alignment:
Q  232 atttttcaaatatataacattaattagttttattgaaaaagataagagtaa 282  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||| |||||    
T  23708 atttttcaaatgtataatattaattagtttgattgaaaaagataaaagtaa 23658  T

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Target: scaffold0242; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 14988 - 14935
Alignment:
Q  115 tcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||| ||||||| || ||||| ||| |||||||||| |||||||    
T  14988 tcatcttatttatagaattttaactcttcataaaatcattattatatgtaacaa 14935  T

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Target: scaffold0242; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 23823 - 23770
Alignment:
Q  115 tcatcttatttatataattttatctattcatgaaaccattattataagtaacaa 168  Q
    |||||||||||||| ||||||| || ||||| ||| |||||||||| |||||||    
T  23823 tcatcttatttatagaattttaactcttcataaaatcattattatatgtaacaa 23770  T

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