View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2698_low_16 (Length: 286)

Name: NF2698_low_16
Description: NF2698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2698_low_16
NF2698_low_16
[»] chr7 (41 HSPs)
chr7 (16-188)||(39117471-39117642)
chr7 (16-184)||(32345817-32345985)
chr7 (16-184)||(36447052-36447220)
chr7 (16-184)||(26963483-26963651)
chr7 (16-184)||(19906418-19906584)
chr7 (16-184)||(36836063-36836230)
chr7 (22-184)||(10684818-10684980)
chr7 (16-182)||(31416733-31416899)
chr7 (26-184)||(1103488-1103644)
chr7 (29-184)||(30514977-30515132)
chr7 (65-184)||(42044010-42044129)
chr7 (62-184)||(40298851-40298971)
chr7 (16-182)||(6521824-6521989)
chr7 (48-184)||(17869241-17869375)
chr7 (48-179)||(34002148-34002277)
chr7 (23-182)||(42259539-42259695)
chr7 (62-184)||(5723007-5723126)
chr7 (31-182)||(41905933-41906081)
chr7 (23-122)||(34733377-34733472)
chr7 (48-112)||(22627369-22627431)
chr7 (48-182)||(3680938-3681070)
chr7 (71-182)||(26527435-26527544)
chr7 (23-122)||(48838670-48838772)
chr7 (87-184)||(19288400-19288497)
chr7 (62-182)||(30833123-30833241)
chr7 (71-182)||(19920310-19920419)
chr7 (29-111)||(29001560-29001642)
chr7 (62-184)||(18733457-18733579)
chr7 (62-134)||(33845439-33845509)
chr7 (43-98)||(19277055-19277110)
chr7 (231-273)||(39117671-39117713)
chr7 (31-100)||(28044139-28044208)
chr7 (23-122)||(47272217-47272314)
chr7 (31-112)||(42121618-42121697)
chr7 (31-96)||(18886735-18886800)
chr7 (24-93)||(40207381-40207450)
chr7 (51-100)||(42010593-42010642)
chr7 (48-96)||(32275285-32275333)
chr7 (145-184)||(22597234-22597273)
chr7 (23-112)||(33056274-33056362)
chr7 (145-182)||(28044242-28044279)
[»] chr5 (36 HSPs)
chr5 (16-184)||(42329527-42329695)
chr5 (28-184)||(33822496-33822652)
chr5 (21-184)||(793592-793755)
chr5 (16-183)||(29653495-29653662)
chr5 (16-182)||(33584956-33585122)
chr5 (21-184)||(4833624-4833782)
chr5 (16-133)||(27652302-27652419)
chr5 (21-137)||(29044770-29044885)
chr5 (16-182)||(34171170-34171333)
chr5 (23-184)||(36660431-36660588)
chr5 (62-184)||(166678-166798)
chr5 (28-118)||(36296127-36296217)
chr5 (72-184)||(13066717-13066827)
chr5 (62-182)||(38982174-38982292)
chr5 (23-184)||(39059810-39059968)
chr5 (24-182)||(15400177-15400334)
chr5 (62-184)||(27810350-27810470)
chr5 (48-184)||(31557356-31557484)
chr5 (21-124)||(32962996-32963098)
chr5 (65-137)||(4742298-4742368)
chr5 (65-137)||(4751562-4751632)
chr5 (57-182)||(28640088-28640211)
chr5 (72-184)||(12992068-12992176)
chr5 (73-184)||(4371367-4371476)
chr5 (62-184)||(32690760-32690880)
chr5 (48-100)||(31889805-31889857)
chr5 (62-182)||(36783361-36783479)
chr5 (23-98)||(43257850-43257925)
chr5 (26-112)||(12167603-12167688)
chr5 (65-122)||(1513043-1513100)
chr5 (31-88)||(4967489-4967546)
chr5 (48-93)||(14980066-14980111)
chr5 (51-98)||(4011678-4011725)
chr5 (67-112)||(16886152-16886195)
chr5 (51-100)||(8961052-8961101)
chr5 (70-98)||(33693819-33693847)
[»] chr4 (53 HSPs)
chr4 (16-184)||(24259611-24259779)
chr4 (16-182)||(34124297-34124463)
chr4 (16-182)||(31941560-31941726)
chr4 (16-184)||(17499701-17499869)
chr4 (28-184)||(45889564-45889719)
chr4 (21-184)||(4408166-4408330)
chr4 (16-184)||(28116245-28116413)
chr4 (16-182)||(47321146-47321313)
chr4 (22-182)||(51434247-51434407)
chr4 (16-182)||(55126499-55126665)
chr4 (16-184)||(19282394-19282562)
chr4 (22-184)||(6462009-6462176)
chr4 (24-182)||(19849086-19849242)
chr4 (22-101)||(54233899-54233978)
chr4 (53-184)||(30022068-30022197)
chr4 (23-182)||(37445662-37445819)
chr4 (23-182)||(45520451-45520607)
chr4 (62-180)||(30492732-30492849)
chr4 (62-182)||(31987306-31987424)
chr4 (25-133)||(34096067-34096173)
chr4 (24-112)||(34360077-34360163)
chr4 (31-181)||(44855245-44855395)
chr4 (23-134)||(42672439-42672548)
chr4 (56-125)||(29289917-29289984)
chr4 (16-105)||(34534077-34534166)
chr4 (49-168)||(35928507-35928622)
chr4 (48-184)||(6510118-6510252)
chr4 (66-182)||(22212343-22212457)
chr4 (23-100)||(15501147-15501224)
chr4 (23-111)||(32140979-32141065)
chr4 (23-133)||(38761819-38761925)
chr4 (23-100)||(39671099-39671176)
chr4 (48-100)||(21045215-21045267)
chr4 (24-100)||(52732673-52732749)
chr4 (62-182)||(54091960-54092078)
chr4 (24-102)||(55548212-55548290)
chr4 (23-182)||(36805443-36805593)
chr4 (71-184)||(45903446-45903557)
chr4 (31-100)||(51930658-51930727)
chr4 (62-184)||(11835107-11835225)
chr4 (92-184)||(29840075-29840168)
chr4 (48-100)||(43421142-43421194)
chr4 (145-184)||(39671194-39671233)
chr4 (31-111)||(31817200-31817279)
chr4 (60-98)||(50072341-50072379)
chr4 (48-112)||(54512095-54512157)
chr4 (23-111)||(56556269-56556355)
chr4 (145-184)||(21045156-21045195)
chr4 (65-123)||(45049770-45049826)
chr4 (145-184)||(50072281-50072320)
chr4 (145-184)||(54233846-54233885)
chr4 (62-100)||(38692472-38692510)
chr4 (71-122)||(3093411-3093460)
[»] chr3 (59 HSPs)
chr3 (16-184)||(25722442-25722610)
chr3 (16-184)||(54933186-54933354)
chr3 (16-184)||(54261419-54261587)
chr3 (16-184)||(20512477-20512646)
chr3 (16-184)||(2988591-2988758)
chr3 (28-184)||(36541495-36541651)
chr3 (16-137)||(43687864-43687985)
chr3 (16-181)||(32303886-32304051)
chr3 (31-184)||(43169338-43169491)
chr3 (21-184)||(53560669-53560831)
chr3 (59-184)||(49470793-49470918)
chr3 (22-184)||(44645342-44645505)
chr3 (26-184)||(83300-83455)
chr3 (22-184)||(51381725-51381890)
chr3 (21-182)||(42007048-42007208)
chr3 (24-169)||(647583-647726)
chr3 (31-184)||(37225593-37225744)
chr3 (23-184)||(38457464-38457623)
chr3 (25-184)||(46363002-46363160)
chr3 (62-184)||(43580479-43580601)
chr3 (56-184)||(27027737-27027863)
chr3 (26-184)||(44854319-44854475)
chr3 (62-182)||(3000758-3000877)
chr3 (62-134)||(4391958-4392028)
chr3 (24-100)||(2568003-2568079)
chr3 (48-182)||(1340944-1341067)
chr3 (23-109)||(2662482-2662568)
chr3 (24-120)||(27039395-27039490)
chr3 (23-112)||(27483183-27483270)
chr3 (62-176)||(35099395-35099507)
chr3 (31-184)||(26965506-26965648)
chr3 (23-100)||(35239447-35239524)
chr3 (51-112)||(36771594-36771653)
chr3 (60-182)||(50420265-50420384)
chr3 (23-112)||(25061771-25061856)
chr3 (62-122)||(15514754-15514812)
chr3 (52-135)||(5244638-5244719)
chr3 (31-182)||(34059882-34060020)
chr3 (21-89)||(52201912-52201980)
chr3 (51-178)||(22730935-22731067)
chr3 (62-112)||(43599859-43599907)
chr3 (62-100)||(16240662-16240700)
chr3 (31-100)||(790158-790227)
chr3 (31-100)||(19552617-19552686)
chr3 (62-184)||(22414759-22414878)
chr3 (23-84)||(38165651-38165712)
chr3 (145-182)||(52202401-52202438)
chr3 (66-98)||(41287166-41287198)
chr3 (48-168)||(43600206-43600323)
chr3 (62-98)||(44648440-44648476)
chr3 (48-112)||(40048952-40049012)
chr3 (145-184)||(43599931-43599970)
chr3 (106-185)||(52222816-52222893)
chr3 (145-182)||(19552546-19552583)
chr3 (67-100)||(31291007-31291040)
chr3 (145-182)||(45095559-45095596)
chr3 (48-100)||(53716091-53716141)
chr3 (70-98)||(4476397-4476425)
chr3 (70-98)||(42740311-42740339)
[»] scaffold0047 (1 HSPs)
scaffold0047 (16-184)||(70436-70604)
[»] chr6 (25 HSPs)
chr6 (21-182)||(34576549-34576710)
chr6 (21-182)||(17345122-17345283)
chr6 (21-184)||(26189511-26189675)
chr6 (21-180)||(25932635-25932795)
chr6 (23-184)||(12828671-12828830)
chr6 (23-184)||(29927210-29927370)
chr6 (48-184)||(29915544-29915679)
chr6 (62-184)||(31275670-31275791)
chr6 (71-184)||(32258725-32258838)
chr6 (23-184)||(4123846-4124004)
chr6 (31-184)||(26669096-26669247)
chr6 (28-182)||(6140605-6140758)
chr6 (28-182)||(6143089-6143243)
chr6 (51-184)||(34439427-34439562)
chr6 (48-184)||(23936599-23936731)
chr6 (32-182)||(10494760-10494909)
chr6 (65-184)||(30627094-30627211)
chr6 (29-80)||(6992508-6992559)
chr6 (62-124)||(8052407-8052467)
chr6 (62-168)||(11785132-11785235)
chr6 (102-182)||(4132042-4132122)
chr6 (48-112)||(1924689-1924751)
chr6 (145-182)||(1924774-1924811)
chr6 (145-185)||(3015918-3015958)
chr6 (71-137)||(19689874-19689938)
[»] chr1 (48 HSPs)
chr1 (16-184)||(254894-255063)
chr1 (16-184)||(44582761-44582929)
chr1 (16-184)||(28200205-28200374)
chr1 (28-184)||(26252121-26252277)
chr1 (16-184)||(2459011-2459175)
chr1 (28-184)||(44024548-44024704)
chr1 (21-176)||(5854212-5854367)
chr1 (21-182)||(17806363-17806522)
chr1 (31-184)||(11650061-11650212)
chr1 (16-182)||(42650232-42650397)
chr1 (22-184)||(22664942-22665100)
chr1 (16-100)||(49894867-49894951)
chr1 (51-184)||(5317596-5317726)
chr1 (50-188)||(2245785-2245923)
chr1 (22-137)||(672271-672383)
chr1 (16-184)||(11134443-11134610)
chr1 (23-184)||(28751398-28751558)
chr1 (21-111)||(50591306-50591396)
chr1 (62-182)||(12002251-12002369)
chr1 (16-114)||(9552338-9552436)
chr1 (32-111)||(38132189-38132268)
chr1 (62-184)||(17919849-17919969)
chr1 (62-184)||(45377179-45377299)
chr1 (52-125)||(50349882-50349953)
chr1 (23-100)||(84508-84585)
chr1 (23-111)||(24041014-24041100)
chr1 (48-181)||(52403482-52403613)
chr1 (47-182)||(15698765-15698898)
chr1 (48-182)||(1428871-1429003)
chr1 (31-105)||(37437402-37437476)
chr1 (71-184)||(50158345-50158456)
chr1 (16-111)||(9333160-9333249)
chr1 (16-111)||(9356933-9357022)
chr1 (62-182)||(40719020-40719138)
chr1 (48-184)||(43929688-43929821)
chr1 (23-100)||(43105592-43105669)
chr1 (48-100)||(1430552-1430604)
chr1 (62-98)||(10690984-10691020)
chr1 (62-120)||(6332234-6332290)
chr1 (145-188)||(50591407-50591450)
chr1 (62-184)||(12851744-12851864)
chr1 (50-96)||(48259880-48259926)
chr1 (48-112)||(30006205-30006267)
chr1 (31-100)||(48319999-48320067)
chr1 (48-100)||(43755113-43755165)
chr1 (145-184)||(24041111-24041150)
chr1 (145-184)||(40061007-40061046)
chr1 (145-182)||(9552440-9552477)
[»] chr2 (36 HSPs)
chr2 (22-182)||(2459778-2459938)
chr2 (16-184)||(41984421-41984590)
chr2 (16-184)||(775867-776034)
chr2 (21-184)||(33093371-33093533)
chr2 (16-184)||(43388640-43388806)
chr2 (16-184)||(25332574-25332741)
chr2 (28-184)||(10580851-10581007)
chr2 (16-182)||(39866654-39866820)
chr2 (22-168)||(4566110-4566256)
chr2 (16-111)||(14698064-14698159)
chr2 (48-182)||(7743406-7743538)
chr2 (31-183)||(4840725-4840875)
chr2 (26-163)||(37106886-37107023)
chr2 (31-184)||(1298778-1298929)
chr2 (23-188)||(36360365-36360526)
chr2 (24-182)||(24775194-24775350)
chr2 (23-100)||(34225835-34225912)
chr2 (31-168)||(43460792-43460927)
chr2 (62-184)||(1360180-1360300)
chr2 (62-184)||(4536577-4536694)
chr2 (30-184)||(16316712-16316864)
chr2 (23-182)||(40987272-40987418)
chr2 (48-111)||(4766227-4766288)
chr2 (48-112)||(40410518-40410580)
chr2 (23-184)||(43344213-43344370)
chr2 (23-120)||(11171808-11171905)
chr2 (23-112)||(1381816-1381901)
chr2 (24-100)||(14378239-14378315)
chr2 (145-184)||(4766298-4766337)
chr2 (145-184)||(14698015-14698054)
chr2 (62-182)||(18374793-18374911)
chr2 (145-184)||(34225776-34225815)
chr2 (51-98)||(42969977-42970024)
chr2 (51-112)||(29795217-29795276)
chr2 (145-182)||(14378334-14378371)
chr2 (48-100)||(45147991-45148044)
[»] chr8 (40 HSPs)
chr8 (16-184)||(14541729-14541895)
chr8 (16-184)||(34461565-34461734)
chr8 (16-184)||(13108991-13109158)
chr8 (16-188)||(34168195-34168359)
chr8 (16-182)||(18673082-18673247)
chr8 (16-111)||(8471333-8471428)
chr8 (16-184)||(27416504-27416672)
chr8 (48-182)||(7612503-7612635)
chr8 (48-184)||(27109836-27109970)
chr8 (26-182)||(11257547-11257699)
chr8 (48-184)||(22601139-22601272)
chr8 (62-182)||(3095533-3095651)
chr8 (62-182)||(8382507-8382625)
chr8 (71-182)||(35052476-35052587)
chr8 (62-182)||(9022400-9022519)
chr8 (62-166)||(32661326-32661428)
chr8 (23-182)||(30788940-30789097)
chr8 (62-188)||(32326754-32326879)
chr8 (28-120)||(32271575-32271668)
chr8 (62-184)||(36915370-36915488)
chr8 (48-100)||(7129362-7129414)
chr8 (48-100)||(11336048-11336100)
chr8 (74-182)||(42946127-42946233)
chr8 (48-182)||(5044242-5044375)
chr8 (23-97)||(38329045-38329118)
chr8 (62-122)||(43938186-43938244)
chr8 (51-178)||(5588485-5588617)
chr8 (65-100)||(26439051-26439086)
chr8 (62-100)||(16209026-16209064)
chr8 (62-100)||(39970410-39970448)
chr8 (50-100)||(41790158-41790208)
chr8 (23-100)||(6839292-6839369)
chr8 (48-92)||(1774086-1774130)
chr8 (24-111)||(18666536-18666621)
chr8 (145-184)||(16208953-16208992)
chr8 (51-98)||(45187314-45187361)
chr8 (145-182)||(1774170-1774207)
chr8 (62-118)||(37185680-37185734)
chr8 (64-100)||(156314-156350)
chr8 (70-98)||(41414920-41414948)
[»] scaffold0003 (1 HSPs)
scaffold0003 (29-182)||(321731-321884)
[»] scaffold0238 (1 HSPs)
scaffold0238 (24-188)||(16031-16192)
[»] scaffold0119 (1 HSPs)
scaffold0119 (31-184)||(1546-1697)
[»] scaffold0519 (1 HSPs)
scaffold0519 (65-137)||(7732-7802)
[»] scaffold0886 (1 HSPs)
scaffold0886 (23-137)||(4098-4211)
[»] scaffold0194 (1 HSPs)
scaffold0194 (71-184)||(8161-8274)
[»] scaffold0072 (1 HSPs)
scaffold0072 (23-100)||(12072-12148)
[»] scaffold0007 (1 HSPs)
scaffold0007 (62-133)||(158154-158223)
[»] scaffold0189 (1 HSPs)
scaffold0189 (62-182)||(13088-13206)


Alignment Details
Target: chr7 (Bit Score: 124; Significance: 8e-64; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 39117471 - 39117642
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39117471 caaatgtcataacaattttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaa-ttggagtat 39117569  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttgatttt 188  Q
    | ||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  39117570 tcattgagggtaatgttggaagaaaataattaaagttgtattgaaaatgtaaaacgacattcattttgatttt 39117642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 32345817 - 32345985
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32345817 caaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtat 32345916  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| |||||||||||||| |||||||||||||||    
T  32345917 ttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttga 32345985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 36447052 - 36447220
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36447052 caaatgtcatagcaattttactaaaataacattactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 36447151  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||| ||||| ||| ||||||||       ||||| ||||||||||||||||||| ||||||||||||||    
T  36447152 ttaatgaggataaagttggaagagaaaaattaaaattgtattgaaaatgtaaaatgacattcattttga 36447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 26963651 - 26963483
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26963651 caaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtat 26963552  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    | ||||||| ||| ||||||||       ||||||||| |||| |||||||||  |||||| |||||||    
T  26963551 tcattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaatagacatttattttga 26963483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 19906584 - 19906418
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  19906584 caaatgtcatagcaattttactaaaataaccttactttataggaacaagacaaacttaaagttgcattgaaaat--tgtgagagagaaaagttggaatat 19906487  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       | |||||||||||| ||||||||| |||||||||||||||    
T  19906486 ttattgagggtaaagttggaagaaaaaaataaaagttgtattggaaatgtaaagcgacattcattttga 19906418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 36836230 - 36836063
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||  ||||||||| ||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||| |    
T  36836230 caaacgtcatatcaattttactaaaataacattactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtgt 36836131  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||| ||||| ||| ||||||||       |||||||||||||||||||||||| |||||||||||||||    
T  36836130 ttactgagg-taaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttga 36836063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 10684818 - 10684980
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 121  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||     
T  10684818 tcataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaaagttttaatatttatta 10684917  T
Q  122 aggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||| ||| ||||||||       ||||||||| |||||||||||||| |  ||||||||||||    
T  10684918 agggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcattttga 10684980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 31416733 - 31416899
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||| ||||||||||||||||||| | || ||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  31416733 caaatgtcaaaacaattttactaaaataatcttattttataagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtat 31416832  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||| ||| ||||||||       ||||||||||||||||||||||||  || |||||||||    
T  31416833 ttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatattcatttt 31416899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 1103644 - 1103488
Alignment:
Q  26 aacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggt 125  Q
    |||| |||||||||| || || ||||||||||||| || ||||| |||||||| |||||||||||||||||  ||||||||||| ||||||||||||||     
T  1103644 aacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaattgtgtga--gagaaaagttgaagtatttattgaggg 1103547  T
Q  126 taatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||| ||||||||       |||||||||||||| |||||||||| ||||||||||||||    
T  1103546 taaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttga 1103488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 30515132 - 30514977
Alignment:
Q  29 aattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaa 128  Q
    ||||||| |||||||||| |||||| ||| ||||||||||| ||||||||| ||| |||||||| ||||||| ||||||||||||||||||||| | |||    
T  30515132 aattttattaaaataaccttactttttaagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaaagttggagtatttattgaaggtaa 30515033  T
Q  129 tgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
     ||||||||       |||||||||||||| |||||||||  ||||||||||||||    
T  30515032 agttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttga 30514977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 42044010 - 42044129
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatg 164  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||       ||||||||||||||||||||    
T  42044010 acaatcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatg 42044109  T
Q  165 taaaacgacattcattttga 184  Q
    ||||  |||||| |||||||    
T  42044110 taaagtgacattaattttga 42044129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 40298971 - 40298851
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| ||| ||||| ||       |||||||||||||||||    
T  40298971 aagacaaacttaaagttacattgaaaattgtgtga--gagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaa 40298874  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  40298873 atgtaaagtgacattcattttga 40298851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 6521989 - 6521824
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||| ||||||||||||| |||||||||| || |||||||||||||| ||| |||||||||||||||||||||  || || ||||||    
T  6521989 caaatgtcataacaattatactaaaataaccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttgagtat 6521890  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||| | ||| |||| |||       ||||| ||| |||||||||||||| ||| |||||||||    
T  6521889 ttattgaaggtaaagttgaaagaaaaaatttaaa-ttgcattgaaaatgtaaagcgatattcatttt 6521824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 17869375 - 17869241
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || || ||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||||| ||| ||||||||       |||    
T  17869375 tactttataagaaaaatacaaacttaaagttgcattgaaaattgtgtga--gagaaaagattgagtatttattgaggataaagttggaaggaaaaaatta 17869278  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||| |||| |||||||||| ||||||||||||||    
T  17869277 aagttgcattggaaatgtaaaatgacattcattttga 17869241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 34002148 - 34002277
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||       |||    
T  34002148 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagagaaaagttggagtatttattgagggtaaagttggaagaataaaatta 34002245  T
Q  148 aagttgtattgaaaatgtaaaacgacattcat 179  Q
    || |||||||| |||||||||  |||||||||    
T  34002246 aacttgtattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 42259539 - 42259695
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| ||||||||||||  || |||||||||| || ||||||| ||||||||||||||||||||| |||  |||| ||||||| |||||||||||||    
T  42259539 cataacacttttactaaaatgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgt--gagacaaaagtttgagtatttattga 42259636  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || ||| ||||||||       |||||||||||||||||| ||||||  |||||||||||    
T  42259637 gggtaaagttggaag-aaaaaattaaagttgtattgaaaacgtaaaataacattcatttt 42259695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 5723126 - 5723007
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||| ||| | ||       |||||||||||||||||    
T  5723126 aagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagtttgagtatttattgagggtaaagttaggag-aaaaaattaaagttgtattgaaa 5723030  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  5723029 atgtaaagtgacattcattttga 5723007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 41905933 - 41906081
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || |||||||||| || |||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||| |    
T  41905933 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--aagagaaaagttggagtatttattgagg-taaag 41906029  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||||||       |||||||||||||  |||||||||  |||||| |||||    
T  41906030 ttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttatttt 41906081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 34733472 - 34733377
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| || || |||||||||| || |||||||||||||||||||||||||||||||    ||||||||| ||||||||||||||||    
T  34733472 cataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgt----gagagaaaaattggagtatttattga 34733377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 22627369 - 22627431
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22627369 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagttggag 22627431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 3680938 - 3681070
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || |||||||| ||||||||||||| |||||| |||  |||||||||||| | ||||||||| | | ||| ||||||||       |||    
T  3680938 tactttataagaaaaagacaaatttaaagttgcatttaaaattctgt--gagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaatta 3681035  T
Q  148 aagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||||||||||||||||||||  ||||||||||||    
T  3681036 aagttgtattgaaaatgtaaagtgacattcatttt 3681070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 26527435 - 26527544
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaac 170  Q
    |||||||||||||||||||| | |   | ||||||||||||||||||||||||||||| ||| ||||       |||||||||||||||||||||||||     
T  26527435 ttaaagttgcattgaaaattattt--aacagaaaagttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaat 26527532  T
Q  171 gacattcatttt 182  Q
     |||||||||||    
T  26527533 aacattcatttt 26527544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 48838670 - 48838772
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataa-----gacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtattt 117  Q
    ||||||| || ||||||| | ||| ||||||||||||||||     |||||| ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  48838670 cataacatttatactaaactgaccttactttataaaaataaaaaaagacaaatttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtattt 48838767  T
Q  118 attga 122  Q
    |||||    
T  48838768 attga 48838772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 19288400 - 19288497
Alignment:
Q  87 aattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||||||||||||||||||||| ||||||||||| ||| ||| ||||       |||||||||||||  |||||||||  ||||||||||||||    
T  19288400 aattgtgtgagagagaaaagttggagaatttattgagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttga 19288497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 30833123 - 30833241
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||| |||| || ||||||||||||  |||| ||||||||||||||||||||| | ||| |||| |||       | |||||||||||||||    
T  30833123 aagacaaacttagagttacactgaaaattgtgt--gagaaaaaagttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgtattgaaa 30833220  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||| || |||||||||    
T  30833221 atgtaaaatgatattcatttt 30833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 19920310 - 19920419
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaac 170  Q
    |||||||||||||||||||  |||| |||||||||||| ||||||||||||||| ||| ||||  ||       |||||||||||||| |||||||||      
T  19920310 ttaaagttgcattgaaaat--tgtgcgagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagt 19920407  T
Q  171 gacattcatttt 182  Q
    ||||||||||||    
T  19920408 gacattcatttt 19920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 29001560 - 29001642
Alignment:
Q  29 aattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    ||||||| |||||||| | || ||||||  || || |||||||||||||||||||||||||||||||||| | ||||||||||    
T  29001560 aattttaataaaataatcttattttataggaacaaaacaaacttaaagttgcattgaaaattgtgtgagaaataaaagttgga 29001642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 18733579 - 18733457
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag--nnnnnnnttaaagttgtattga 159  Q
    |||||||| ||||||||||||||||| ||||||  |||| |||| |||||||||||||||||| ||  ||| ||||         |||||||||||||||    
T  18733579 aagacaaatttaaagttgcattgaaagttgtgt--gagaaaaaaattggagtatttattgagggtagagttcgaagaaaaaaaaattaaagttgtattga 18733482  T
Q  160 aaatgtaaaacgacattcattttga 184  Q
    |||||||||  ||||||||||||||    
T  18733481 aaatgtaaagtgacattcattttga 18733457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 33845439 - 33845509
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttgg 134  Q
    ||||||||||||||||||||||||||||  |||| |||| ||||||||||||| ||||||||| ||| |||||    
T  33845439 aagacaaacttaaagttgcattgaaaat--tgtgcgagaaaaaagttggagtaattattgagggtaaagttgg 33845509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 19277055 - 19277110
Alignment:
Q  43 aaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    |||| |||||||||  || |||||||||||||||||||||||||||||||||||||    
T  19277055 aaccttactttatatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 39117671 - 39117713
Alignment:
Q  231 aaacgaagggagtaccttcgagcagatcatgtttttgggcttc 273  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  39117671 aaacgaagggagtatcttcgagcagatcatgtttttgggcttc 39117713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 28044139 - 28044208
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| |  || |||||||||| || |||||||| ||||||||| ||||||||||||||||||||    
T  28044139 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgtgtgagaga 28044208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 47272314 - 47272217
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    |||||||||||||||||| |  || |  ||||||  || ||||||||| |||| ||||||||||||||||||||| || |||||||| ||||||||||||    
T  47272314 cataacaattttactaaactgcccttgttttatatgaaaaagacaaacataaaattgcattgaaaattgtgtgag-ga-aaaagttgaagtatttattga 47272217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 42121697 - 42121618
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||||||| | ||| |||||||| | || |||| | |||||||||||||||||||||||| |  ||||||||||||||||    
T  42121697 ttttactaaactgaccttactttattagaaaaagatacacttaaagttgcattgaaaattgttt--gagagaaaagttggag 42121618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 18886800 - 18886735
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtga 96  Q
    |||||||||| |  || ||||||||||  | |||||||| ||||||||||||||||||||||||||    
T  18886800 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtga 18886735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 40207381 - 40207450
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtg 93  Q
    |||||| |||||||||| |  || |||||||||| || | |||||||||||| |||||||||||||||||    
T  40207381 ataacacttttactaaactgcccttactttataagaaaatgacaaacttaaaattgcattgaaaattgtg 40207450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 42010593 - 42010642
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| || ||||||||||||||||| ||||||||||||| |||||||    
T  42010593 tttataagaaaaagacaaacttaaagttacattgaaaattgtatgagaga 42010642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 32275333 - 32275285
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtga 96  Q
    |||||||||| || ||  |||||||||||||||||||||||||||||||    
T  32275333 tactttataagaaaaaatcaaacttaaagttgcattgaaaattgtgtga 32275285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 22597273 - 22597234
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  22597273 ttaaagttgtattgaaaatgtaaagtgacattcattttga 22597234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 33056274 - 33056362
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaa-aataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||| |||||||||| |  || |||||||| || || |||||||| |||||  |||||||||||||||||  ||||||||||||||||    
T  33056274 cataacacttttactaaactgcccttactttattaagaaaaagacaaatttaaaactgcattgaaaattgtgt--gagagaaaagttggag 33056362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 28044242 - 28044279
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  28044242 ttaaagttgtattgaaaatgtaaagtgacattcatttt 28044279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 42329527 - 42329695
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42329527 caaatgtcatagcaattttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtat 42329626  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| ||| ||| ||||||||       |||||||||||||| |||||||||  ||||||||||||||    
T  42329627 ttattaagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 42329695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 33822496 - 33822652
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||    
T  33822496 caattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggta 33822595  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    | |||| |||       ||||||||||||||||||||||||  ||||||||||||||    
T  33822596 aagttgaaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 33822652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 793592 - 793755
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  793592 gtcatagcaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttatt 793691  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||| ||  ||||||||       |||||||||||||| |||||||||  ||||||||||||||    
T  793692 gagggtagagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 793755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 29653495 - 29653662
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||  |||||||||| || ||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  29653495 caaatgtcatagcaattttactaaaataacgttactttataagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtat 29653594  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttg 183  Q
    ||||||||| ||| ||||||||       |||||||||||||| |||||||||| |||||||||||||    
T  29653595 ttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttg 29653662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 33584956 - 33585122
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33584956 caaatgtcataacaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtat 33585055  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||| | ||| ||||||||       ||||||||||||||||||||||||  ||| ||||||||    
T  33585056 ttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcatttt 33585122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 4833624 - 4833782
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||||||||||||||||||||||| |||||     ||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  4833624 gtcataacaattttactaaaataaccttactt-----aaaaaagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttatt 4833718  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||| ||| ||||||||       ||||||||| |||||||||||||| | |||||||||||||    
T  4833719 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcaacattcattttga 4833782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 27652302 - 27652419
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  27652302 caaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattat 27652401  T
Q  116 ttattgaggttaatgttg 133  Q
    ||||||||| ||| ||||    
T  27652402 ttattgagggtaaagttg 27652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 29044885 - 29044770
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  29044885 gtcataacaattttactaaaataatcttactttataagaataagataaacttaaagttgcattgaaaattgtgtg-gagagaaaagtttgagcatttatt 29044787  T
Q  121 gaggttaatgttggaag 137  Q
    |||| ||| ||||||||    
T  29044786 gaggataaagttggaag 29044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 34171333 - 34171170
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| ||||||  |||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| |||  |||||||||||| ||||||    
T  34171333 caaatgtcatagaaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattctgt--gagagaaaagtttgagtat 34171236  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||| | ||| |||||||        ||||||||||||||||||||||||  ||||||||||||    
T  34171235 ttattgaaggtaaagttggaa-aaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 34171170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 36660588 - 36660431
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| ||||||||||||  || |||||||||| || |||||||||||||||||| ||  ||||||||    |||||||||| |||||||||||||||    
T  36660588 cataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgtataaaaaattgt----gagagaaaagctggagtatttattga 36660493  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || ||| ||||||||       ||||||||||||||||||||||||  ||||||||||||||    
T  36660492 gggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 36660431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 166678 - 166798
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| ||||||||       |||||||||||||| ||    
T  166678 aagacaaacttaaagttgcattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 166775  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  166776 atgtaaagtgacattcattttga 166798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 36296127 - 36296217
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtattta 118  Q
    ||||||||||||||||||| || ||||||  || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  36296127 caattttactaaaataaccttaatttataggaacaagacaaacttaaagttgcattgaaaattgtgtgagcgagaaaagttggagtgttta 36296217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 13066827 - 13066717
Alignment:
Q  72 taaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacg 171  Q
    ||||||||||||||||||||||  |||||  |||||||||||||||||||||| ||| |||||||        |||||||||||||| |||||||||| |    
T  13066827 taaagttgcattgaaaattgtgcaagaga--aaagttggagtatttattgagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatg 13066730  T
Q  172 acattcattttga 184  Q
    |||||||||||||    
T  13066729 acattcattttga 13066717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 38982174 - 38982292
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||| ||| ||||| ||       |||||||||||||| ||    
T  38982174 aagacaaacttaaagttgcattgaaaat--tgtgcgagagaaaagtttgagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattggaa 38982271  T
Q  162 atgtaaaacgacattcatttt 182  Q
    || ||||  ||||||||||||    
T  38982272 atataaagtgacattcatttt 38982292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 39059968 - 39059810
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| || || |  ||||||  || || |||||||||||||||||||||||||||| |  |||| |||| ||||||||||||||||    
T  39059968 cataacacttttactaaactacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtat--gagaaaaaatttggagtatttattga 39059871  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || ||| ||| ||||       |||||||||||||||||||||||| | |||||||||||||    
T  39059870 gggtaaagttagaag-aaaaaattaaagttgtattgaaaatgtaaagcaacattcattttga 39059810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 15400334 - 15400177
Alignment:
Q  24 ataacaattttactaaaataaccgt-actttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    |||||| ||||||||||||  || | ||||||||| || |||  |||||||||||| ||||| ||||||| |||||||  |||||| |||||||||||||    
T  15400334 ataacacttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcattggaaattgtatgagaga--aaagtttgagtatttattga 15400237  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || ||| ||||||||       |||||||||||||| |||||||||  ||||||||||||    
T  15400236 ggataaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcatttt 15400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 27810470 - 27810350
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||| ||| ||||||||| |||||||||||||||||| |  |||||| ||||||||||||||| ||| |||| |||       |||||||||||||||||    
T  27810470 aagataaatttaaagttgtattgaaaattgtgtgagaaa--aaagtttgagtatttattgaggataaagttgaaagaaaaaaattaaagttgtattgaaa 27810373  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  27810372 atgtaaagtgacattcattttga 27810350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 31557356 - 31557484
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||          ||||||||||||   ||| ||||||||       |||    
T  31557356 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga--------atagtatttattgaaaataaagttggaagaaaaaaatta 31557447  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31557448 aagttgtattgaaaatgtaaaatgacattcattttga 31557484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 32962996 - 32963098
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||| || ||||| |||||||||  |||||||||| || |||||||||||||| |||||||| ||||||| ||| | ||||||||| |||||||||||    
T  32962996 gtcatagcagttttattaaaataactttactttataagaaaaagacaaacttaaa-ttgcattggaaattgtttgaaaaagaaaagttagagtatttatt 32963094  T
Q  121 gagg 124  Q
    ||||    
T  32963095 gagg 32963098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 4742298 - 4742368
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag 137  Q
    ||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||||||| ||| ||||||||    
T  4742298 acaaacttaaagttgaattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaag 4742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 4751562 - 4751632
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag 137  Q
    ||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||||||| ||| ||||||||    
T  4751562 acaaacttaaagttgaattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaag 4751632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 28640211 - 28640088
Alignment:
Q  57 aaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtat 156  Q
    |||| |||||||||||||||||| |||||||||  |||  ||||||||||||| |||||||||||||| ||| ||||| ||       ||||||||| ||    
T  28640211 aaaaaaagacaaacttaaagttgtattgaaaat--tgttcgagagaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaagttgaat 28640114  T
Q  157 tgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||  |||||| |||||    
T  28640113 tgaaaatgtaaagtgacatttatttt 28640088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 12992176 - 12992068
Alignment:
Q  72 taaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacg 171  Q
    ||||||||||||||||||||||  |||||  |||||||||||||||||||||| ||| |||||||        |||||||||||||  |||||||||| |    
T  12992176 taaagttgcattgaaaattgtgcaagaga--aaagttggagtatttattgaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatg 12992081  T
Q  172 acattcattttga 184  Q
    |||||||||||||    
T  12992080 acattcattttga 12992068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 4371476 - 4371367
Alignment:
Q  73 aaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacga 172  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||| ||| | ||       |||||||||||||| |||||||||  ||    
T  4371476 aaagttgcattgaaaattgtgtga--gagaaaagtttgagtatttattgagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtga 4371379  T
Q  173 cattcattttga 184  Q
    | ||||||||||    
T  4371378 cgttcattttga 4371367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 32690760 - 32690880
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    ||||||||| ||||||||||||||||||  |||| ||||||||||||| |||||||||||||  ||| ||||  ||       |||||||||||||  ||    
T  32690760 aagacaaacctaaagttgcattgaaaat--tgtgcgagagaaaagttgaagtatttattgagagtaaagttgagagaaaaaaattaaagttgtatttgaa 32690857  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  32690858 atgtaaagtgacattcattttga 32690880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 31889857 - 31889805
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  31889857 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 31889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 36783479 - 36783361
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||| | ||| ||| ||| ||||       ||| |||||||||| ||    
T  36783479 aagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttgtattggaa 36783382  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||  |||||| |||||    
T  36783381 atgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 43257850 - 43257925
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    ||||||| || ||||||| |  || |||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  43257850 cataacacttatactaaactgcccttactttataagaaatagacaaacttaaagttgcattgaaaattgtgtgaga 43257925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 12167603 - 12167688
Alignment:
Q  26 aacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||| |||||||||| |  || |||||||||| || | | ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  12167603 aacacttttactaaactgcccttactttataagaaaaggtcaaacttaaagttgcattgaaaatt-tgtgtgagagaaaagttggag 12167688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 1513100 - 1513043
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    |||||||||||||||| |||||||||||| ||| |||||||||| ||||| |||||||    
T  1513100 acaaacttaaagttgctttgaaaattgtgagagggagaaaagttagagtacttattga 1513043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 4967489 - 4967546
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaa 88  Q
    |||||||||| |  || ||||||||||||| |||||||| ||||||||||||||||||    
T  4967489 ttttactaaactgcccttactttataaaaaaaagacaaaattaaagttgcattgaaaa 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 14980066 - 14980111
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtg 93  Q
    |||||||||| || |||||||| |||||||||||||||||||||||    
T  14980066 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtg 14980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 4011678 - 4011725
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    ||||||| || |||| ||| ||||||||||||||||||||||||||||    
T  4011678 tttataagaaaaagataaaattaaagttgcattgaaaattgtgtgaga 4011725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 16886195 - 16886152
Alignment:
Q  67 aaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||||||||||||||||||||||||  || |||||||||||||    
T  16886195 aaacttaaagttgcattgaaaattgtgt--gatagaaaagttggag 16886152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 8961052 - 8961101
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| || |||| ||| ||||||||||| ||||||||||||||||||    
T  8961052 tttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgagaga 8961101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 33693847 - 33693819
Alignment:
Q  70 cttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||||||||||||||||||||||    
T  33693847 cttaaagttgcattgaaaattgtgtgaga 33693819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 7e-52; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 24259779 - 24259611
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24259779 caaatgtcataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 24259680  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| |||| |||||||||  ||||||||||||||    
T  24259679 ttattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttga 24259611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 34124463 - 34124297
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  34124463 caaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtat 34124364  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||| ||| ||||||||       ||||||||| |||||||||||||| |||||||||||||    
T  34124363 ttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcatttt 34124297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 31941726 - 31941560
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| |||||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  31941726 caaatgtcatagcaattttattaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtat 31941627  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||| ||| ||||||||       ||||||||||||||||||||||||  ||||||||||||    
T  31941626 ttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 31941560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 17499701 - 17499869
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  17499701 caaatgtcataacaattttactaaaataacattactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtat 17499800  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||| ||| |||| ||||||||| |||||||||||||||    
T  17499801 ttattgagggtaaagttggaagaaaaaaattaaaattgcattggaaatgtaaagcgacattcattttga 17499869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 45889719 - 45889564
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    ||||||||||||||||||| |||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45889719 caattttactaaaataaccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggta 45889620  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    | || |||||       ||||||||||||||||||||| || |||||||||||||||    
T  45889619 aagtaggaagaaaaaagttaaagttgtattgaaaatgt-aagcgacattcattttga 45889564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 4408166 - 4408330
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||||||||||||||||||||||| |||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  4408166 gtcataacaattttactaaaataaccttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttatt 4408265  T
Q  121 gaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||| || |||||        ||||||||| ||||| |||||||| |||||||||||||||    
T  4408266 gaggttaaagtcggaagaagaaaaattaaagttgcattgagaatgtaaagcgacattcattttga 4408330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 28116413 - 28116245
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||| |||||||||||| ||||||    
T  28116413 caaatgtcatagcaattttactaaaataaccttactttataagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtat 28116314  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| ||| ||| ||||||||       |||||||||||||| |||||||||  |||||| |||||||    
T  28116313 ttattaagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttga 28116245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 47321313 - 47321146
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||    
T  47321313 caaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtat 47321214  T
Q  116 ttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||| ||| ||||||||        ||||||||||||||||||||||||  ||||||||||||    
T  47321213 ttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 47321146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 51434247 - 51434407
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 121  Q
    |||||||||||||| |||||||||| |||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  51434247 tcataacaattttattaaaataaccttactttataagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattg 51434346  T
Q  122 aggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||| ||| ||| ||||       ||||||||| |||  ||||||||| |||||||||||||    
T  51434347 agggtaaagtttgaaggaaaaaattaaagttgcattagaaatgtaaagcgacattcatttt 51434407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 55126665 - 55126499
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||  |||||||||||| ||||||    
T  55126665 caaatgtcatagcaattttactaaaataaccttactttataagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaagttagagtat 55126566  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || || ||| ||  ||| ||||       ||||||||||||||||||| ||||| ||||||||||||    
T  55126565 ttttttagggtagagttagaagagaaaaattaaagttgtattgaaaatttaaaatgacattcatttt 55126499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 19282394 - 19282562
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||| |||  ||||||||||||||||||||||| ||||||    
T  19282394 caaatgtcataacaattttactaaaataaccttactttataaaac-aagacaaacttaaaattgtattagaaattgtgtgagagagaaaagttagagtat 19282492  T
Q  116 ttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||| | ||| ||||||||        |||||||||||||| |||||||||  ||||||||||||||    
T  19282493 ttattgaaggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 19282562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 6462176 - 6462009
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtg--agagagaaaagttggagtatttat 119  Q
    ||||| |||||| |||||||||||| |||||||||| || || |||||||||||||||||||||| ||||||||  | ||| ||||||| ||||||||||    
T  6462176 tcatagcaatttgactaaaataaccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtgaaatagataaaagtttgagtatttat 6462077  T
Q  120 t---gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |   |||| ||| ||||||||       |||||||||||||| ||||||||| |||||||||||||||    
T  6462076 tgaggagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttga 6462009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 19849242 - 19849086
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 123  Q
    |||||| |||||||||| |  ||  ||||||||| || || ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19849242 ataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattgag 19849145  T
Q  124 gttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    | ||| ||||||||       |||||||||||||| || ||||||  || |||||||||    
T  19849144 ggtaaagttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcatttt 19849086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 54233978 - 54233899
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagag 101  Q
    ||||| ||||||||||||||||| | |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  54233978 tcatatcaattttactaaaataagcttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagag 54233899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 30022197 - 30022068
Alignment:
Q  53 tataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagtt 152  Q
    ||||| || |||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||| ||||||||       ||||||||    
T  30022197 tataagaaaaagacaaactcaaagttgcattgaaaattgtgtga--gagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagtt 30022100  T
Q  153 gtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||| |||||| ||   |||||||||||||    
T  30022099 gtattggaaatgtcaagtaacattcattttga 30022068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 37445819 - 37445662
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| |  || |||||||||| || |||||||| ||||||||||||| |||||| |||  || |||||| || || ||||||||||    
T  37445819 cataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgt--gaaagaaaaatttgaatatttattga 37445722  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || ||| ||||||||       ||||||||||||| ||||||||||| ||||||||||||    
T  37445721 gggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcatttt 37445662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 45520451 - 45520607
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||  |  || ||| |||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||| ||||||||||  |    
T  45520451 cataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaattgtat--gagagaaaagtttgagtatttatcaa 45520548  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || ||| ||||||||       ||||||||||||||||||||||||  ||||||||||||    
T  45520549 ggataaagttggaag-aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45520607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 30492849 - 30492732
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||||||||||| |||| | ||||  ||||||||||||||||||||||||||| ||| ||||| ||       |||||||||||||||||    
T  30492849 aagacaaacttaaagttgcattaaaaaat-tgtgcaagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaa 30492751  T
Q  162 atgtaaaacgacattcatt 180  Q
    |||||||  ||||||||||    
T  30492750 atgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 31987424 - 31987306
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||| |||||||||||||||||||| || ||||||  |||||||||||||||||||||| ||| ||||||||       |||||||||||||  ||    
T  31987424 aagacaaatttaaagttgcattgaaaattatgcgagaga--aaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattagaa 31987327  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||  ||||||||||||    
T  31987326 atgtaaagtgacattcatttt 31987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 34096173 - 34096067
Alignment:
Q  25 taacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagg 124  Q
    ||||| |||||||||| |  || |||||||||| || ||||||||||||||||| |||||||||||||||||  |||||||||| || ||||||||||||    
T  34096173 taacacttttactaaattgcccttactttataagaaaaagacaaacttaaagtttcattgaaaattgtgtga--gagaaaagtttgaatatttattgagg 34096076  T
Q  125 ttaatgttg 133  Q
     ||| ||||    
T  34096075 gtaaagttg 34096067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 34360163 - 34360077
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||| |||||||||| |  || |||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34360163 ataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagttggag 34360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 44855395 - 44855245
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || ||||||||||  | |||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||| |    
T  44855395 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtga--gagaaaagttggattatttattgagggtaaag 44855298  T
Q  131 --ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattt 181  Q
      |||||||       |||||||||||||| |||||||||  |||||| ||||    
T  44855297 aattggaagagaaaacttaaagttgtattggaaatgtaaagtgacatttattt 44855245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 42672548 - 42672439
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| ||  | |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||  |||||| ||||||||||||    
T  42672548 cataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaaattgtgtaagagag--aagttgaagtatttattga 42672451  T
Q  123 ggttaatgttgg 134  Q
    || ||| |||||    
T  42672450 gggtaaagttgg 42672439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 29289917 - 29289984
Alignment:
Q  56 aaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggt 125  Q
    ||||| |||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  29289917 aaaaaaaagacaaacttaaaattgcattgaaaattgtgt--gagagaaaagttgaagtatttattgaggt 29289984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 34534077 - 34534166
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaa-gttgcattgaaaattgtgtgagagagaaaa 105  Q
    |||| |||||| ||||||||||||||||||| |  ||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||    
T  34534077 caaatgtcatagcaattttactaaaataacc-tcttttataagaaaaagacaaacttaaaagttgcattgaaaattgtgtgaaagagaaaa 34534166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 35928622 - 35928507
Alignment:
Q  49 actttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaa 148  Q
    ||||||||| || |||| ||||||||| ||||||||||||||||    || ||||| |||| |||||||||||||| ||| ||||||||       ||||    
T  35928622 actttataagaaaaagataaacttaaaattgcattgaaaattgt----gaaagaaacgttgcagtatttattgagggtaaagttggaagaaaaaaattaa 35928527  T
Q  149 agttgtattgaaaatgtaaa 168  Q
    ||||||||||||||||||||    
T  35928526 agttgtattgaaaatgtaaa 35928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 6510252 - 6510118
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || |||||||||||||| || |||| ||||||||||   ||||||||| ||||||||||||||||| ||| ||||  ||       |||    
T  6510252 tactttataataaaaagacaaacttaaaattacattaaaaattgtgt--aagagaaaaggtggagtatttattgagggtaaagttgagagaaaaaagtta 6510155  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||||||||||| ||||  |||||| |||||||    
T  6510154 aagttgtattgaaaatataaagtgacatttattttga 6510118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 22212457 - 22212343
Alignment:
Q  66 caaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgt 165  Q
    |||||||||||||| ||||||||||||||  |||| ||| ||||||||||||||||||| ||| ||||||||       |||||||| ||||| ||||||    
T  22212457 caaacttaaagttgtattgaaaattgtgt--gagaaaaatgttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgt 22212360  T
Q  166 aaaacgacattcatttt 182  Q
    ||   ||||||||||||    
T  22212359 aaggtgacattcatttt 22212343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 15501147 - 15501224
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| |||||||||| |  || |||||||||| || || ||||||||||||||||||| ||||||||||||||||    
T  15501147 cataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagaga 15501224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 32140979 - 32141065
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    ||||||| |||||||||| |  || ||||||||||| | ||||||||| |||| ||||||||||||||||||||||  |||||||||||    
T  32140979 cataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgcattgaaaattgtgtgaga--gaaaagttgga 32141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 38761819 - 38761925
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| ||||||||||  | || |||||||| | |  |||||| |||||||||| | ||||||||||||    |||||||||||||||||||||||||    
T  38761819 cataacacttttactaaatcacccttactttattagagaaagacacacttaaagttaccttgaaaattgtg----agagaaaagttggagtatttattga 38761914  T
Q  123 ggttaatgttg 133  Q
    |||||| ||||    
T  38761915 ggttaaagttg 38761925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 39671099 - 39671176
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||  ||||||||| || |  |||||||||| || || ||||||||||||||||||||||||||||||||||||    
T  39671099 cataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagaga 39671176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 21045267 - 21045215
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  21045267 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 21045215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 52732749 - 52732673
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||| |||||||||| |  || ||||||||||  | |||||||| ||||||||||||||||||||||||||||||    
T  52732749 ataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 52732673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 54092078 - 54091960
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||| ||| |||||||||| || ||||||  |||||||||||||||||||||| ||| ||||  ||       ||||||||||||| |||    
T  54092078 aagacaaacttaaaattgtattgaaaattatgcgagaga--aaagttggagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattaaaa 54091981  T
Q  162 atgtaaaacgacattcatttt 182  Q
    || ||||  ||||||||||||    
T  54091980 atctaaattgacattcatttt 54091960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 55548212 - 55548290
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagaga 102  Q
    ||||||||||||||||||||  | ||||||||   |  ||||||||||||||||||||||| |||||||| ||||||||    
T  55548212 ataacaattttactaaaatagtcttactttatttgacaaagacaaacttaaagttgcattggaaattgtgagagagaga 55548290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 36805443 - 36805593
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| |  || || ||||||  || |||||||||||||||||| ||||||||||||||  |||| |||||||||||       |||    
T  36805443 cataacacttttactaaactgtccttagtttatatgaaaaagacaaacttaaagttgtattgaaaattgtgt--gagaaaaaagttggag-------tga 36805533  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||||| ||||||||       |||||||||||||| ||||||||||  |||| ||||||    
T  36805534 ggttaaagttggaagaaaaaaattaaagttgtattgcaaatgtaaaataacatacatttt 36805593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 45903446 - 45903557
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaac 170  Q
    |||||||||||||||||||||  |||||||  |||||  ||||| || |||||||| | ||||| ||       ||||||||||||||||||||||||      
T  45903446 ttaaagttgcattgaaaattggatgagaga--aaagtcagagtactttttgaggtttaagttggtagaaaaaaattaaagttgtattgaaaatgtaaagt 45903543  T
Q  171 gacattcattttga 184  Q
    ||||||||||||||    
T  45903544 gacattcattttga 45903557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 51930727 - 51930658
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| |  || |||||||||| || | |||||| ||||||||||||||||||||||||||||||    
T  51930727 ttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgtgtgagaga 51930658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 11835225 - 11835107
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||| |||||||||||||||||||||||||||||||||    ||| | ||||||||||||| | |||  ||| |||       |||||||| |||| |||    
T  11835225 aagataaacttaaagttgcattgaaaattgtgtgagag----aaggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaa 11835130  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  11835129 atgtaaagtgacattcattttga 11835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 29840168 - 29840075
Alignment:
Q  92 tgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||| |||||||||||||||||||||||||||| ||| ||||| ||        |||||||||||||| |||||||||  ||||||||||||||    
T  29840168 tgtgcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 29840075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 43421142 - 43421194
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| || |||||||| |||||||||||||||| |||||||||||||    
T  43421142 tactttataagaaaaagacaaaattaaagttgcattgaatattgtgtgagaga 43421194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 39671194 - 39671233
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  39671194 ttaaagttgtattggaaatgtaaaacgacattcattttga 39671233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 31817200 - 31817279
Alignment:
Q  31 ttttactaaaataaccgtactttataa-aaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||||||||| |  || |||||||||| ||| || ||||| ||||||||||||||||||||||||||||  |||||||||||    
T  31817200 ttttactaaacttcccttactttataagaaaaaatacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttgga 31817279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 50072379 - 50072341
Alignment:
Q  60 ataagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  50072379 ataagacaaaattaaagttgcattgaaaattgtgtgaga 50072341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 54512157 - 54512095
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||||||| || | |||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  54512157 tactttataagaaaatgacaaaattaaagttgcattgaacattgtgtga--gagaaaagttggag 54512095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 56556269 - 56556355
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    ||||||| |||||||||| || || | |||||||| || || ||||||||||  || |||||||||||||||||||  |||||||||||    
T  56556269 cataacacttttactaaattatccttgctttataagaaaaatacaaacttaacattacattgaaaattgtgtgaga--gaaaagttgga 56556355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 21045195 - 21045156
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  21045195 ttaaagttgtattgaaaatgtaaagtgacattcattttga 21045156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 45049826 - 45049770
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 123  Q
    |||||||||||||||||||||||||  |||| || |||||||| |||||| ||||||||    
T  45049826 acaaacttaaagttgcattgaaaat--tgtgcgaaagaaaagtaggagtacttattgag 45049770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 50072320 - 50072281
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  50072320 ttaaagttgtattgaaaatgtaaagtgacattcattttga 50072281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 54233885 - 54233846
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  54233885 ttaaagttgtattgaaaatgtaaagcggcattcattttga 54233846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 38692510 - 38692472
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  38692510 aagacaaaattaaagttgcattgaaaattgtgcgagaga 38692472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 3093460 - 3093411
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    |||||||||||| | |||||||||||||||  ||||||| ||||||||||||    
T  3093460 ttaaagttgcatcggaaattgtgtgagaga--aaagttgaagtatttattga 3093411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 7e-52; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 25722442 - 25722610
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25722442 caaatgtcataacaattttactaaaataaccttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 25722541  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| ||| ||| ||  ||||       ||||||||||||||||||||||||  ||||||||||||||    
T  25722542 ttatttagggtaaagtatgaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 25722610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 54933186 - 54933354
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54933186 caaatgtcataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 54933285  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| |||| |||||||||  ||||||||||||||    
T  54933286 ttattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttga 54933354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 54261587 - 54261419
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  54261587 caaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtat 54261488  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| |||||||||||||| |||| ||||||||||    
T  54261487 ttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcattttga 54261419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 20512477 - 20512646
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20512477 caaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtat 20512576  T
Q  116 ttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||| | ||| ||||||||        ||||||||| |||||||||||||| |||||||||||||||    
T  20512577 ttattgaaggtaaagttggaagaaaaaaatttaaagttgcattgaaaatgtaaagcgacattcattttga 20512646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 2988591 - 2988758
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  2988591 caaatgtcatagcaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtat 2988690  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||| |||||||| |||||||||  ||||||||||||||    
T  2988691 ttattgagggtaaagttggaagaaaaaaattaaa-ttgtattggaaatgtaaagtgacattcattttga 2988758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 36541651 - 36541495
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    ||||||||||||||| ||| | |||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||    
T  36541651 caattttactaaaattaccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggta 36541552  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    | ||||||||        |||||||||||||||||||||||||||||||||||||||    
T  36541551 aagttggaagaaataaagtaaagttgtattgaaaatgtaaaacgacattcattttga 36541495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 43687864 - 43687985
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  43687864 caaatgtcataacaattttactaaaataaccttactttataagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtat 43687963  T
Q  116 ttattgaggttaatgttggaag 137  Q
    ||||||||| ||| ||||||||    
T  43687964 ttattgagggtaaagttggaag 43687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 32303886 - 32304051
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || ||| ||||||||||| || |||||||||||||| ||||||||||||| ||||||    
T  32303886 caaatgtcatagcaattttactaaaataaccttactttataagaaaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtat 32303985  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattt 181  Q
    ||||||||| ||| ||||||||       ||||||||||||||||||||||||  |||||||||||    
T  32303986 ttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattt 32304051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 43169491 - 43169338
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| | ||| |    
T  43169491 ttttactaaaataaccttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaag 43169392  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || ||||       |||||||||||||| |||||||||| ||||||||||||||    
T  43169391 ttagaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttga 43169338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 53560831 - 53560669
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    ||||||| |||||||||||||||||| |||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||| |||| |||||     
T  53560831 gtcataataattttactaaaataaccttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatc 53560732  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||| ||| ||||||||       ||||||||| |||| ||||||||||||||||| |||||||    
T  53560731 gaggataaagttggaag-aaaaaattaaagttgcattgtaaatgtaaaacgacatttattttga 53560669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 49470918 - 49470793
Alignment:
Q  59 aataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattg 158  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||  ||||| |       ||||||||||||||    
T  49470918 aataagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttattgtggctaaatttggatgaaaaaaattaaagttgtattg 49470819  T
Q  159 aaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||||    
T  49470818 aaaatgtaaaacgacattcattttga 49470793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 44645505 - 44645342
Alignment:
Q  22 tcataacaattttactaaaataa-ccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    ||||| ||||||| ||||||||| || |||||||||  || |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  44645505 tcatagcaattttgctaaaataaaccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttatt 44645406  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||| ||| ||||||||       ||||||||| || | ||||||||| |||||||||||||||    
T  44645405 gagggtaaagttggaagaaaaaaattaaagttgcatgggaaatgtaaagcgacattcattttga 44645342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 83455 - 83300
Alignment:
Q  26 aacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggt 125  Q
    |||| |||||||||| || || |||||||||| || |||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||| |||||     
T  83455 aacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgcgt--gagagaaaagttagagtatttaatgaggg 83358  T
Q  126 taatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||| ||||||||       ||||||||||||||||||||||||| ||||||||||||||    
T  83357 taaagttggaag-aaaaaattaaagttgtattgaaaatgtaaaatgacattcattttga 83300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 51381890 - 51381725
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgaga--gagaaaagttggagtatttat 119  Q
    ||||| || |||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  51381890 tcatagcagttttactaaaataaccttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttat 51381791  T
Q  120 tgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
     |||| ||| ||| ||||        |||||||||||||| |||||||||  |||||| |||||||    
T  51381790 cgagggtaaagttagaagaaaaaaaattaaagttgtattgtaaatgtaaagtgacatttattttga 51381725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 42007048 - 42007208
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||| ||||||| ||||||||||| || ||||||| || ||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  42007048 gtcatagcaatttttctaaaataaccttattttataagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttatt 42007147  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
     ||| ||| |||  ||        ||||| ||||||||||||||||||||||||||||||||    
T  42007148 aaggataaagtt-taaaaaaaaatttaaaattgtattgaaaatgtaaaacgacattcatttt 42007208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 647583 - 647726
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 123  Q
    |||||| |||||||||| |  || |||||||||| || ||||||||||||||||||||||||||||| |||   ||||||||||| ||||||||||||||    
T  647583 ataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattctgt--aagagaaaagttagagtatttattgag 647680  T
Q  124 gttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaa 169  Q
    | ||| ||||||||       |||||||||||||||||||||||||    
T  647681 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaa 647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 37225593 - 37225744
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || |||||||||| || |||||||| ||||||||||||||||||||||||  |||||||||||| | ||||||||||||| ||| |    
T  37225593 ttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagagaaaagttagcgtatttattgagggtaaag 37225690  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||       |||||||||||||| |||||||||  ||||||||||||||    
T  37225691 ttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttga 37225744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 38457623 - 38457464
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| |  |  |||||||| | || |||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  38457623 cataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaaattgtgtga--gagaaaagttggagtatttattga 38457526  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || ||| |||||| |       ||||||||||||||||||||||||| || |||||||||||    
T  38457525 gggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttga 38457464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 46363002 - 46363160
Alignment:
Q  25 taacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagg 124  Q
    ||||| |||||||||| |  || |||||||||| || || ||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  46363002 taacatttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaaattgtgt--gagagaaaagttggagtatttattgagg 46363099  T
Q  125 ttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
     ||| ||||||||        ||||||||||||||||||||||||  ||||||||||||||    
T  46363100 gtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 46363160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 43580601 - 43580479
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaa 160  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||| ||||||||        ||||||||||||||||    
T  43580601 aagacaaatttaaagttgcattgaaaattgtgtgaga-aaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaagttgtattgaa 43580503  T
Q  161 aatgtaaaacgacattcattttga 184  Q
    ||||||||  |||||| |||||||    
T  43580502 aatgtaaagtgacatttattttga 43580479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 27027863 - 27027737
Alignment:
Q  56 aaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgta 155  Q
    ||||| |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| ||| ||||       ||||| |||||    
T  27027863 aaaaaaaagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgta 27027766  T
Q  156 ttgaaaatgtaaaacgacattcattttga 184  Q
    ||| |||||||||  |||||| |||||||    
T  27027765 ttggaaatgtaaattgacattaattttga 27027737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 44854475 - 44854319
Alignment:
Q  26 aacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggt 125  Q
    |||| |||||||||| |  || |||||||||| || || ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||     
T  44854475 aacacttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattgaaaattgt-actgagagaaaagttggagtatttattgaggg 44854377  T
Q  126 taatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||  |||||||       ||||| ||||||||||||||||||  ||| ||||||||||    
T  44854376 taaaattggaag-aaaaagttaaaattgtattgaaaatgtaaagtgacgttcattttga 44854319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 3000877 - 3000758
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaa 160  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||  ||||| ||        ||||||||||||||||    
T  3000877 aagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgtattgaa 3000780  T
Q  161 aatgtaaaacgacattcatttt 182  Q
    ||||||||   |||||||||||    
T  3000779 aatgtaaagtaacattcatttt 3000758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 4392028 - 4391958
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttgg 134  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| |||||    
T  4392028 aagacaaacttaaagttgcattgaaaat--tgtgcgagagaaaagttggagtatttattgagggtaaagttgg 4391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 2568003 - 2568079
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||| |||||| |||||  || |||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  2568003 ataacacttttacaaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 2568079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 1340944 - 1341067
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||         |||| ||| ||||||||       |||    
T  1340944 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagttgga---------gagggtaacgttggaagaaaaaaatta 1341032  T
Q  148 aagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||||||||||||||||||||  ||||||||||||    
T  1341033 aagttgtattgaaaatgtaaagtgacattcatttt 1341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 2662482 - 2662568
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttg 109  Q
    ||||||| |||||||||| |  || || ||||||| || |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  2662482 cataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaaaagttg 2662568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 27039490 - 27039395
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataa-gacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||| |||||||||| |  || ||||||||||||| || |||||| |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  27039490 ataacacttttactaaagtgtccttactttataaaaaaaaagacaaatttaaagttgcattgaaaattgtgtg--agaggaaagttggagtatttatt 27039395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 27483183 - 27483270
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||| |||||||||| |  || |||||||||| || ||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  27483183 cataacacttttactaaatttcccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgt--gagagaaaagttggag 27483270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 35099395 - 35099507
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||| |||||||||||||  |||| |||||||||||| ||||||||||| ||| ||| ||||| ||       |||||||||||||| ||    
T  35099395 aagacaaacttaaaattgcattgaaaat--tgtgcgagagaaaagtttgagtatttattaagggtaaagttgggagaaaaaaattaaagttgtattggaa 35099492  T
Q  162 atgtaaaacgacatt 176  Q
    |||||||| ||||||    
T  35099493 atgtaaaatgacatt 35099507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 26965506 - 26965648
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || |||||||||| || |||||||| ||||||||||||||||||||||||  |||||||||||||||         |||| ||| |    
T  26965506 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagagaaaagttgga---------gagggtaaag 26965594  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||       ||||||||||||||||||||||||  ||||||||||||||    
T  26965595 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 26965648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 35239524 - 35239447
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| |||||||||| |  || |||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  35239524 cataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaattgtgtgagaga 35239447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 36771594 - 36771653
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36771594 tttataagaaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagttggag 36771653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 50420384 - 50420265
Alignment:
Q  60 ataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattga 159  Q
    |||| |||||||||||||||||||||||||  || | |||||||||||| |||||||||||||   ||| ||||||||       ||||||||||||| |    
T  50420384 ataacacaaacttaaagttgcattgaaaat--tgcgcgagagaaaagttagagtatttattgaaagtaaagttggaag-aaaaaattaaagttgtattaa 50420288  T
Q  160 aaatgtaaaacgacattcatttt 182  Q
    |||||||||| |||||| |||||    
T  50420287 aaatgtaaaatgacatttatttt 50420265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 25061856 - 25061771
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||| |||||||||| || || |||||||||| || ||  ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  25061856 cataacacttttactaaactacccttactttataagaaaaa--caaacttaaagttgcattgaaaattgtat--gagagaaaagttggag 25061771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 15514754 - 15514812
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||||||||||||||||||||||||  | || ||||||||||||||||||| ||||||    
T  15514754 aagacaaacttaaagttgcattgaaaat--tatgcgagagaaaagttggagtatctattga 15514812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 5244719 - 5244638
Alignment:
Q  52 ttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttgga 135  Q
    |||||| || || |||||||||||||||||||||||||  |||  ||||||||| || ||||||||||||||| ||| ||||||    
T  5244719 ttataagaaaaaaacaaacttaaagttgcattgaaaataatgt--gagagaaaaattagagtatttattgagggtaaagttgga 5244638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 182
Target Start/End: Complemental strand, 34060020 - 34059882
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| || || |||||||||| || |||||||  |||||||||||||||||||  |||| |||||||||||||||         |||| ||| |    
T  34060020 ttttactaaactacccttactttataagaaaaagacaa--ttaaagttgcattgaaaat--tgtgcgagagaaaagttgga---------gagggtaaag 34059934  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||| |||       ||||||||||||||||||||||||| ||||||||||||    
T  34059933 ttgaaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcatttt 34059882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 52201912 - 52201980
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaat 89  Q
    ||||||| |||||||||||||||||| ||||||| |  || ||||||||||||| |||| |||||||||    
T  52201912 gtcataataattttactaaaataaccttactttaaaggaacaagacaaacttaatgttgtattgaaaat 52201980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 178
Target Start/End: Complemental strand, 22731067 - 22730935
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattg-----tgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnt 145  Q
    ||||||| || ||||||||||||||||| ||||  | ||||     |||| |||||||||||| ||||||||||||| | ||| ||||||||       |    
T  22731067 tttataagaaaaagacaaacttaaagttacattttacattgaaatttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaat 22730968  T
Q  146 taaagttgtattgaaaatgtaaaacgacattca 178  Q
    ||||||||||||| |||||||||  ||||||||    
T  22730967 taaagttgtattggaaatgtaaattgacattca 22730935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 43599859 - 43599907
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  43599859 aagacaaacttaaagttgcattaaaaattgtgt--gagagaaaagttggag 43599907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 16240700 - 16240662
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16240700 aagacaaacttaaagttgcattgaaaattgtgcgagaga 16240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 790227 - 790158
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| |  || |||||||||| || ||| |||| |||||||||||||| |||||||||||||||    
T  790227 ttttactaaactgcccttactttataagaaaaagtcaaaattaaagttgcattggaaattgtgtgagaga 790158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 19552686 - 19552617
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| |  || |||||||||| || || ||||| |||||||||||||||||||| |||||||||    
T  19552686 ttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattgaaaattctgtgagaga 19552617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 22414878 - 22414759
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaa 160  Q
    |||| |||||||||||||||||||||||||||| ||||    ||| | ||||||||||||| | ||| ||||||||        |||||||| |||| ||    
T  22414878 aagagaaacttaaagttgcattgaaaattgtgtaagag----aaggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaa 22414783  T
Q  161 aatgtaaaacgacattcattttga 184  Q
    ||||||||  ||||||||||||||    
T  22414782 aatgtaaagtgacattcattttga 22414759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 38165651 - 38165712
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattg 84  Q
    ||||||| |||||||||| |  || |||||||||| || |||||||||||||||||||||||    
T  38165651 cataacacttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 52202401 - 52202438
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||||||||||||||||||| |||||||||||||||||    
T  52202401 ttaaagttgtattgaaaatgcaaaacgacattcatttt 52202438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 41287198 - 41287166
Alignment:
Q  66 caaacttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||||||||||||||||||||||||||    
T  41287198 caaacttaaagttgcattgaaaattgtgtgaga 41287166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 43600206 - 43600323
Alignment:
Q  48 tactttataaaaataa-gacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntt 146  Q
    ||||||||||||| || |||||| ||||||||  |||| |||||||||  |||||||||| | ||||||||||||||| ||| ||||||||       ||    
T  43600206 tactttataaaaaaaatgacaaatttaaagttatattggaaattgtgt--gagagaaaag-tagagtatttattgagggtaaagttggaag-aaaaaatt 43600301  T
Q  147 aaagttgtattgaaaatgtaaa 168  Q
    ||| ||||||||||||||||||    
T  43600302 aaaattgtattgaaaatgtaaa 43600323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 44648440 - 44648476
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||||||||||| ||||||||||||||||||    
T  44648440 aagacaaacttaaagttgaattgaaaattgtgtgaga 44648476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 40049012 - 40048952
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||||||| || |||||||| |||||||||||||||||||| |    ||||||||||||||||    
T  40049012 tactttataagaaaaagacaaatttaaagttgcattgaaaattat----gagagaaaagttggag 40048952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 43599931 - 43599970
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  43599931 ttaaagttgtatgaaaaatgtaaaacgacattcattttga 43599970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 52222816 - 52222893
Alignment:
Q  106 gttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttgat 185  Q
    ||||||||||||| ||||| ||| ||||||||       |||||||||||||| |||||  |||||||||||||||||||    
T  52222816 gttggagtatttactgagggtaaagttggaagaaaaaaattaaagttgtattggaaatg--aaacgacattcattttgat 52222893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 19552583 - 19552546
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  19552583 ttaaagttgtattgaaaatgtaaagtgacattcatttt 19552546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 31291007 - 31291040
Alignment:
Q  67 aaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||||||||||| ||||||||||||||||||    
T  31291007 aaacttaaagttgcaatgaaaattgtgtgagaga 31291040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 45095596 - 45095559
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  45095596 ttaaagttgtattgaaaatgtaaagtgacattcatttt 45095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 53716141 - 53716091
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| || |||||||  |||||||||||||||||| |||||||||||    
T  53716141 tactttataagaaaaagacaa--ttaaagttgcattgaaaactgtgtgagaga 53716091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 4476397 - 4476425
Alignment:
Q  70 cttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||||||||||||||||||||||    
T  4476397 cttaaagttgcattgaaaattgtgtgaga 4476425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 42740339 - 42740311
Alignment:
Q  70 cttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||||||||||||||||||||||    
T  42740339 cttaaagttgcattgaaaattgtgtgaga 42740311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 70436 - 70604
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| ||||| |||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  70436 caaatgtcatgacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtat 70535  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| ||||||||||||||  ||||||||||||||    
T  70536 ttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttga 70604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 34576710 - 34576549
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||||||||||||||||||||||  ||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34576710 gtcataacaattttactaaaataactttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttatt 34576611  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||| ||| ||||||||       |||||||||||||| |||||||||| || |||||||||    
T  34576610 gaggataaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgatattcatttt 34576549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 17345122 - 17345283
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||| ||||||||||||||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17345122 gtcatagcaattttactaaaataaccttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 17345221  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||| ||| ||||||||       |||||||||||||  |||||||||  || |||||||||    
T  17345222 gagggtaaagttggaagaaaaatattaaagttgtattagaaatgtaaagtgatattcatttt 17345283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 26189675 - 26189511
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataa-aaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttat 119  Q
    |||||| ||||| ||||||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  26189675 gtcatagcaattatactaaaataaccttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttat 26189576  T
Q  120 tgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| ||| ||||||||       ||||||||| |||| ||||||||||| |||||||||||||    
T  26189575 tgagggtaaagttggaagaaaaatattaaagttgcattggaaatgtaaaacaacattcattttga 26189511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 25932795 - 25932635
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||| ||||||||||||||||||| |||||||||  || ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  25932795 gtcatagcaattttactaaaataaccttactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttatt 25932696  T
Q  121 gaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatt 180  Q
    |||| ||| ||| ||||        ||||||||| |||||||||||||| | |||||||||    
T  25932695 gaggataaagttagaagaaaaaaaattaaagttgcattgaaaatgtaaagccacattcatt 25932635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 12828671 - 12828830
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| |  || |||||||||| || ||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  12828671 cataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgt--gagagaaaagttgaagtatttattga 12828768  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || ||| ||||||||       |||||||||||||| |||||||||  || |||||||||||    
T  12828769 gggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttga 12828830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 29927370 - 29927210
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| ||||||||| ||| || |||||||||| || ||||||||||||||||||||||||||| |   |  ||||||||||||||||||||||||||    
T  29927370 cataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaaactacat--gagagaaaagttggagtatttattga 29927273  T
Q  123 ggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || ||| ||||||||        |||||||||||||| |||||||||  ||||||||||||||    
T  29927272 gggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 29927210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 29915679 - 29915544
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnntt 146  Q
    |||||||||| || ||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||| ||||||||        ||    
T  29915679 tactttataagaaaaagacaaacataaagttgcattggaaattgtgtga--gagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaatt 29915582  T
Q  147 aaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||||||| |||||||||  ||||||||||||||    
T  29915581 aaagttgtattggaaatgtaaagtgacattcattttga 29915544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 31275670 - 31275791
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaa 160  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| ||||||||        |||||||||||||| |    
T  31275670 aagacaaacttaaagttgcattgaaaattgtgt--gagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgga 31275767  T
Q  161 aatgtaaaacgacattcattttga 184  Q
    ||||||||  ||||||||||||||    
T  31275768 aatgtaaagtgacattcattttga 31275791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 32258838 - 32258725
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg-aggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaa 169  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||| ||||||||       ||||||||||||||||||||||||     
T  32258838 ttaaagttgcattgaaaattgtgtgagaga-aaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaag 32258740  T
Q  170 cgacattcattttga 184  Q
     ||||||||||||||    
T  32258739 tgacattcattttga 32258725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 4123846 - 4124004
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||| ||||||| |||| || || || |||||||  | || ||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||    
T  4123846 cataataattttattaaactatccttattttataaggaaaaaacaaacttaaa-ttgcattgaaaattgtgtgaaaga--aaagttggagtatttattga 4123942  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || ||| |||| |||       ||||||||||||| ||||||||||  ||||||||||||||    
T  4123943 gggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttga 4124004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 26669096 - 26669247
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || |||||||||| || |||||||| |||||||||||||||||||| |||  ||||||||||||||||  |||||||||| ||| |    
T  26669096 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagagaaaagttggagattttattgaggataaag 26669193  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| |       |||||||||||||| |||| ||||  ||||||||||||||    
T  26669194 ttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 26669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 6140758 - 6140605
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    ||||||||||||||||||  |||||||||  || |||| |   ||||| |||||||||||||||||| |||||||||||||  |||||||||||| | ||    
T  6140758 caattttactaaaataactttactttatatgaaaaagatatgtttaaaattgcattgaaaattgtgtaagagagaaaagtttaagtatttattgaaggta 6140659  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    | ||||||||       ||||||||| |||| ||||||||| |||||||||||||    
T  6140658 aagttggaag-aaaaaattaaagttgaattggaaatgtaaagcgacattcatttt 6140605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 6143243 - 6143089
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    ||||||||||||||||||  |||||||||  || |||| |   ||||| ||||||| |||||||||| ||||| |||||||  |||||||||||| | ||    
T  6143243 caattttactaaaataactttactttatatgaaaaagatatgtttaaaattgcattaaaaattgtgtaagagaaaaaagtttaagtatttattgaaggta 6143144  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    | ||||||||       ||||||||| |||| |||||||||| ||||||||||||    
T  6143143 aagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcatttt 6143089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 34439427 - 34439562
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagag---agaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    ||||||| || ||||||||| ||||||||||||| ||||||||| ||||   |||||||||||||||| |||||| | ||| ||||||||       | |    
T  34439427 tttataagaaaaagacaaacataaagttgcattggaaattgtgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaag-aaagaatga 34439525  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  34439526 aagttgtattggaaatgtaaaatgacattcattttga 34439562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 23936599 - 23936731
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || || ||||| ||||||||||||||||||||||    |||||||| |||||||||| |||||||| ||| ||||||||       | |    
T  23936599 tactttataagaaaaaaacaaatttaaagttgcattgaaaattgt----gagagaaaggttggagtatatattgagggtaaagttggaagaaaaaaatga 23936694  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||| ||||||||||||||   |||||||||||||    
T  23936695 aagttgcattgaaaatgtaaagtaacattcattttga 23936731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 10494760 - 10494909
Alignment:
Q  32 tttactaaaataaccgtactttataa-aaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    ||||||||| || || |||||||||| ||| ||||||||||| ||||||||||||||||||| |  ||||||||||||||| ||||||||  ||  || |    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtat--gagagaaaagttggactatttattttgggcaaag 10494857  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||| |||       ||||||||| |||| |||||||||  ||||||||||||    
T  10494858 ttgaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcatttt 10494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 30627211 - 30627094
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatg 164  Q
    ||||| |||||||||||||||||||||| |  |||||||||||| ||||||||||||||| ||| ||||  ||       |||||||||||||||||||     
T  30627211 acaaatttaaagttgcattgaaaattgttt--gagagaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattgaaaata 30627114  T
Q  165 taaaacgacattcattttga 184  Q
    ||||  |||||| |||||||    
T  30627113 taaagtgacatttattttga 30627094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 6992559 - 6992508
Alignment:
Q  29 aattttactaaaataaccgtactttataaaaataagacaaacttaaagttgc 80  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||||||    
T  6992559 aattttactaaaataaccttactttataagaaaaagacaaacttaaagttgc 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 8052467 - 8052407
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagg 124  Q
    ||||||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||    
T  8052467 aagacaaacctaaagttgcattgaaaat--tgtgggagagaatagttggagtatttattgagg 8052407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 11785132 - 11785235
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||| ||| ||||||||| ||||||||||||||  |||||||||||| || |||||||||||| ||| ||||||||       |||||||||||||| ||    
T  11785132 aagataaatttaaagttgtattgaaaattgtgt--gagagaaaagttagaatatttattgagggtaaagttggaag-aaaaaattaaagttgtattggaa 11785228  T
Q  162 atgtaaa 168  Q
    |||||||    
T  11785229 atgtaaa 11785235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 4132042 - 4132122
Alignment:
Q  102 aaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||||||||||||| ||| |||| |||       ||||||||||||| ||||||||||  ||||||||||||    
T  4132042 aaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcatttt 4132122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 1924689 - 1924751
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||||||  | || ||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  1924689 tactttataaggaaaatacaaaattaaagttgcattgaaaattgtgt--gagagaaaagttggag 1924751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 1924774 - 1924811
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  1924774 ttaaagttgtattgaaaatgtaaaatgacattcatttt 1924811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 3015958 - 3015918
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttgat 185  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  3015958 ttaaagttgtattgaaaatgtaaagtgacattcattttgat 3015918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 19689874 - 19689938
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag 137  Q
    ||||||||| ||||| ||||||||||||  ||||||||||||||||| || || |||| ||||||||    
T  19689874 ttaaagttgtattgacaattgtgtgaga--gaaaagttggagtatttttttagattaaagttggaag 19689938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 254894 - 255063
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  254894 caaatgtcatagcaattttactaaaataaccctactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtat 254993  T
Q  116 ttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||        ||||||||| |||| ||||||||| |||||||||||||||    
T  254994 ttattgagggtaaagttggaagaaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttga 255063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 44582761 - 44582929
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  44582761 caaatgtcataacaattttactaaaataatcttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtat 44582860  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       |||||||||||||| |||||||||  |||||| |||||||    
T  44582861 ttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttga 44582929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 28200205 - 28200374
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || || ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  28200205 caaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtat 28200304  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgta-ttgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| | ||||||||||| | |||||||||||||||    
T  28200305 ttattgagggtaaagttggaagaaaaaaattaaagttgcatttgaaaatgtagagcgacattcattttga 28200374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 26252277 - 26252121
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    ||||||||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||    
T  26252277 caattttactaaaataaccttattttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggta 26252178  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    | ||||||||       || ||||||||||| |||||||||  ||||||||||||||    
T  26252177 aagttggaagaaaaaaatttaagttgtattggaaatgtaaagtgacattcattttga 26252121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 2459175 - 2459011
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || || ||||||||||||||| ||||||||||||    |||||||||||| ||||||    
T  2459175 caaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgt----gagagaaaagtttgagtat 2459080  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || |||||| ||| ||||||||       ||||||||| |||||||||||||| |||||||||||||||    
T  2459079 ttgttgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttga 2459011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 44024704 - 44024548
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    ||||||||||||||||||| || ||||||   | |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||    
T  44024704 caattttactaaaataaccttattttatagggacaagacaaacttaaagttaaattgaaaattgtgtgagagagaaaagttgaagtatttattgagggta 44024605  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    | ||||||||       ||||||||| |||||||||||||| || ||||||||||||    
T  44024604 aagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcattttga 44024548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 5854212 - 5854367
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||||||||||||||||||||||  |||||||||| || ||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  5854212 gtcataacaattttactaaaataactttactttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttatt 5854311  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacatt 176  Q
    |||| ||| |||||||        ||||||||| |||| ||||||||| |||||||    
T  5854312 gaggataaagttggaataaaaaaattaaagttgcattggaaatgtaaagcgacatt 5854367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 17806363 - 17806522
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||||||||||||||||||||||  | |||||||| || |||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||    
T  17806363 gtcataacaattttactaaaataactttcctttataagaaaaagacaaacttaaaattgcattgaaaattgtat--gagagaaaagttggagtatttatt 17806460  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || | |||  |||||||       |||||||||||||| ||||||||| ||||| |||||||    
T  17806461 gaaggtaaaattggaagtaaaaaattaaagttgtattggaaatgtaaagcgacactcatttt 17806522  T

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Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 11650212 - 11650061
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || ||||||| || || ||||||||||||||||||||||| |||||||||||  ||||||| |||||||||||||||||| ||| |    
T  11650212 ttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaattgtgtga--gagaaaaattggagtatttattgagggtaaag 11650115  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||       ||||||||||||||||||||||||  ||||||||||||||    
T  11650114 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 11650061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 42650232 - 42650397
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| || ||||||| || |||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  42650232 caaatgtcatagcaattttactaaaataaccttagtttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagaga-aaaagttgaagtat 42650330  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || |||| | ||| | ||||||       |||||||||||||  ||||||||| ||||||| |||||    
T  42650331 ttcttgaaggtaaagctggaagaaaaaaattaaagttgtattagaaatgtaaagcgacatttatttt 42650397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 22665100 - 22664942
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 121  Q
    ||||| ||||||||||||| ||||| |||||||||| || |||||||||||||||||| ||| ||||||||    |||||| ||||||||||||||||||    
T  22665100 tcatagcaattttactaaactaaccttactttataagaacaagacaaacttaaagttgaattaaaaattgt----gagagagaagttggagtatttattg 22665005  T
Q  122 aggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||| ||| ||||||||       |||| ||||||||| |||||||||  ||||||||||||||    
T  22665004 agggtaaagttggaagaaattaattaacgttgtattggaaatgtaaagtgacattcattttga 22664942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 49894951 - 49894867
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  49894951 caaatgtcataacaattttactaaaataaccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagaga 49894867  T

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Target: chr1; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 5317596 - 5317726
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaag 150  Q
    ||||||| || ||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||| ||| ||||||||       ||||||    
T  5317596 tttataagaaaaagacaaacttaaagttgcattgaaaattgtg---gagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaag 5317692  T
Q  151 ttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||| ||||||  ||||||||||||||    
T  5317693 ttgtattgaaattgtaaagtgacattcattttga 5317726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 2245923 - 2245785
Alignment:
Q  50 ctttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaa 149  Q
    |||||||| || ||||||||||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||| ||| |||| |||       |||||    
T  2245923 ctttataagaaaaagacaaacttaaagatgcattgaaaattgtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaa 2245824  T
Q  150 gttgtattgaaaatgtaaaacgacattcattttgatttt 188  Q
    ||||||||||||||||||   |||||||||||| |||||    
T  2245823 gttgtattgaaaatgtaaggtgacattcattttaatttt 2245785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 672271 - 672383
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 121  Q
    ||||| ||||||||||||||||||| ||||| |||| || |||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||    
T  672271 tcatatcaattttactaaaataaccttactt-ataagaaaaagacaaacttaaatttgcattgaaaattgtgt--gagagaaaagttagagtatttattg 672367  T
Q  122 aggttaatgttggaag 137  Q
    ||| ||| ||||||||    
T  672368 agggtaaagttggaag 672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 11134443 - 11134610
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| ||||| ||| ||||||||||||| || ||||||||   |  |||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  11134443 caaatgtcatgacagttttactaaaatagccttactttatttgacaaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtat 11134542  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||||||  || |||||||        ||||||||| ||||||||||||||  ||||||||||||||    
T  11134543 ttattgagggcaaagttggaa-aaagaaattaaagttgcattgaaaatgtaaagtgacattcattttga 11134610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 28751398 - 28751558
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| |  || |||||||||| || | ||||||||||||||| ||||||||||  |||| |||||||||||| |||||||||||||    
T  28751398 cataacatttttactaaactgcccttactttataagaaaaggacaaacttaaagttacattgaaaat--tgtgcgagagaaaagtttgagtatttattga 28751495  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgaca-ttcattttga 184  Q
    || ||| ||||||||       ||||||||||||||||||||||||  |||| ||||||||||    
T  28751496 gggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacatttcattttga 28751558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 50591306 - 50591396
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||||||||||||||||||||||||| || ||||||  || |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  50591306 gtcataacaattttactaaaataaccttattttataggaacaagacaaacttaaaattgcattgaaaattgtgtgatagagaaaagttgga 50591396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 12002369 - 12002251
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| | ||| | ||||||       |||||||||||||| ||    
T  12002369 aagacaaacttaaagttgcattgaaaattgtgt--gagaaaaaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaa 12002272  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||| ||||||||||||    
T  12002271 atgtaaaatgacattcatttt 12002251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 9552338 - 9552436
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 114  Q
    |||| |||||| ||||||||||||||||| | |||||||||| || ||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||    
T  9552338 caaatgtcatagcaattttactaaaataaacttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgagagaaaaaagtttgagta 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 38132189 - 38132268
Alignment:
Q  32 tttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    ||||||||||||||| |||||||||  || |||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  38132189 tttactaaaataaccttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaagaaaagttgga 38132268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 17919849 - 17919969
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||| |||||| |||||||| ||| ||||||||       |||||||||||||| ||    
T  17919849 aagacaaacttaaagttgcattgaaaattgtgt--gagaaaaaagttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgtattggaa 17919946  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  || |||||||||||    
T  17919947 atgtaaagtgatattcattttga 17919969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 45377179 - 45377299
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    ||||||||||||||||| ||||||||||  |||| ||||||||||||||||||| |||||||| ||| ||||| ||        ||||||||||||| ||    
T  45377179 aagacaaacttaaagtttcattgaaaat--tgtgcgagagaaaagttggagtatctattgagggtaaagttgggagaaaaaaagtaaagttgtattggaa 45377276  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  45377277 atgtaaagtgacattcattttga 45377299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 50349882 - 50349953
Alignment:
Q  52 ttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggt 125  Q
    |||||| || |||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  50349882 ttataagaaaaagacaaacttaaagttgcattgaaaattgtgt--gagagaaaagtttgagtatttattgaggt 50349953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 84508 - 84585
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| ||||||||||||  || |||||||||| || |||||||||||||||||||||||||||||||| ||||||    
T  84508 cataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaga 84585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 24041014 - 24041100
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    ||||||| |||||||||| |  || |||||||||| || |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24041014 cataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagttgga 24041100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 52403613 - 52403482
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    ||||||||||  | |||||||| ||||||||||| |||||||| ||||||||||  ||||| ||||||||||||||| ||| |||||||        |||    
T  52403613 tactttataaggaaaagacaaaattaaagttgcactgaaaattatgtgagagag--aagtttgagtatttattgagggtaaagttggaatagaaaactta 52403516  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattt 181  Q
    |||||||||||||||| ||||  |||||||||||    
T  52403515 aagttgtattgaaaatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 182
Target Start/End: Original strand, 15698765 - 15698898
Alignment:
Q  47 gtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntt 146  Q
    ||||||||||| || |||| ||||||||||||  |||||||||| |||  |||||||||||| ||||||||||||||  ||| ||||||||       ||    
T  15698765 gtactttataagaaaaagataaacttaaagttctattgaaaattatgt--gagagaaaagtttgagtatttattgagagtaaagttggaagaagaaaatt 15698862  T
Q  147 aaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||||||||||| |||| ||||  ||||||||||||    
T  15698863 aaagttgtattggaaatataaagtgacattcatttt 15698898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 1429003 - 1428871
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || | |||||||||||||||| |||| |||||||||||  |||||||||| ||||||||||||||| ||| |||| |||       ||     
T  1429003 tactttataagaaaaggacaaacttaaagttgaattggaaattgtgtga--gagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaattt 1428906  T
Q  148 aagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||  |||||||||  ||||||||||||    
T  1428905 aagttgtattagaaatgtaaagtgacattcatttt 1428871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 37437402 - 37437476
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaa 105  Q
    |||||||||| |  || |||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||    
T  37437402 ttttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaa 37437476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 50158345 - 50158456
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaa 169  Q
    ||||||||||||| ||||||||||||||  |||||||||||| |||| |||||||||| ||||||||        ||||||||||||||||||||||||     
T  50158345 ttaaagttgcatt-aaaattgtgtgaga--gaaaagttggagaattttttgaggttaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaag 50158441  T
Q  170 cgacattcattttga 184  Q
     ||||||||||||||    
T  50158442 tgacattcattttga 50158456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 9333249 - 9333160
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||| |||||| |||||||||||||| |||| |||||||||| ||||||||||||      ||| |||||||||||||||||||| ||||||||||    
T  9333249 caaatgtcatagcaattttactaaaacaaccttactttataagaataagacaaac------ttgtattgaaaattgtgtgagagataaaagttgga 9333160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 9357022 - 9356933
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||| |||||| |||||||||||||| |||| |||||||||| ||||||||||||      ||| |||||||||||||||||||| ||||||||||    
T  9357022 caaatgtcatagcaattttactaaaacaaccttactttataagaataagacaaac------ttgtattgaaaattgtgtgagagataaaagttgga 9356933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 40719138 - 40719020
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||| ||| ||||||||| ||||| |||||||| ||| |  |||||||||||||||||||| | ||| ||||||||       ||||||||||||| |||    
T  40719138 aagataaatttaaagttgtattgagaattgtgtaagaaa--aaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattaaaa 40719041  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||  ||||||||||||    
T  40719040 atgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 43929821 - 43929688
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || ||||| |||||||||||| || ||||||| |||  |||||||||| ||||||||||||||||| ||| ||||||||       |||    
T  43929821 tactttataagaaaaagactaacttaaagttgtatcgaaaattatgt--gagagaaaag-tggagtatttattgagggtaaagttggaaggaaaaaatta 43929725  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||| |||   |||  ||||||||||||||    
T  43929724 aagttgtattggaaactgaaattgacattcattttga 43929688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 43105592 - 43105669
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| |||||||||| || |  || ||||||| || |||||||||||||| ||||||||||||||| ||||||||    
T  43105592 cataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgcattgaaaattgcgtgagaga 43105669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 1430552 - 1430604
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||| ||||    
T  1430552 tactttataagaaaaagacaaacttaaagttgcattggaaattgtgtgtgaga 1430604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 10690984 - 10691020
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||||||||||||||||||||||||||||||    
T  10690984 aagacaaacttaaagttgcattgaaaattgtgtgaga 10691020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 6332290 - 6332234
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    ||||||||| ||||||| |||||||||||||||  |||| |||||||||||||||||||    
T  6332290 aagacaaacataaagttacattgaaaattgtgt--gagaaaaaagttggagtatttatt 6332234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 50591407 - 50591450
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttgatttt 188  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  50591407 ttaaagttgtattggtaatgtaaaacgacattcattttgatttt 50591450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 12851864 - 12851744
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||| ||||||||||||| |||||||| |||  ||  |||||| |||||| |||||||| ||| ||||| ||       |||||||| ||||| ||    
T  12851864 aagacaaaattaaagttgcattaaaaattgtatgaatga--aaagtttgagtatatattgagggtaaagttgggagaaaaaaattaaagttctattggaa 12851767  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  12851766 atgtaaagtgacattcattttga 12851744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 48259880 - 48259926
Alignment:
Q  50 ctttataaaaataagacaaacttaaagttgcattgaaaattgtgtga 96  Q
    |||||||| || |||| ||||||||||||||||||||||||||||||    
T  48259880 ctttataagaaaaagataaacttaaagttgcattgaaaattgtgtga 48259926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 30006267 - 30006205
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||||||| || |||| ||| |||||||||||||||||||||| |  ||||||||||||||||    
T  30006267 tactttataagaaaaagataaatttaaagttgcattgaaaattgttt--gagagaaaagttggag 30006205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 48319999 - 48320067
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| |  || ||||||||||||  ||||||||||||||||||||| | |||||||||||||||    
T  48319999 ttttactaaattgcccttactttataaaagaaagacaaacttaaagttgcatcg-aaattgtgtgagaga 48320067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 43755165 - 43755113
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||| |||| || ||||||||||||||||||  |||||||||||||||||||    
T  43755165 tacttaataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagaga 43755113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 24041111 - 24041150
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  24041111 ttaaagttgtattgaaaatgtaaagtgacattcattttga 24041150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 40061007 - 40061046
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  40061007 ttaaagttgtattgaaaatgtaaagtgacattcattttga 40061046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 9552440 - 9552477
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  9552440 ttaaagttgtattggaaatgtaaaatgacattcatttt 9552477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 2459938 - 2459778
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 121  Q
    ||||| |||||||||||||| |||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2459938 tcatagcaattttactaaaacaaccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 2459839  T
Q  122 aggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||| ||| ||||||||       ||||||||| |||| ||||||||| |||||||||||||    
T  2459838 agggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcatttt 2459778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 41984590 - 41984421
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaa-cttaaagttgcattgaaaattgtgtgagagagaaaagttggagta 114  Q
    |||| |||||| ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  41984590 caaatgtcatagcaattttactaaaataaccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagta 41984491  T
Q  115 tttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||||| | | ||| ||||||||       |||||||||||||||||||||||| ||| ||| |||||||    
T  41984490 tttattaaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgatatttattttga 41984421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 775867 - 776034
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  775867 caaatgtcataacaattttactaaaataaccttaatttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtat 775966  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||| ||||       ||||||||| |||||||||||||| |||||||||||||||    
T  775967 ttattgagggtaaagttagaag-aaaaaattaaagttgcattgaaaatgtaaagcgacattcattttga 776034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 33093533 - 33093371
Alignment:
Q  21 gtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    |||||||||||||||||||| ||||| |||||||||| |  |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  33093533 gtcataacaattttactaaa-taaccttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttatt 33093435  T
Q  121 gaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    |||| ||| ||||||||       ||||||||||||||||||||||||  ||||||||||||||    
T  33093434 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 33093371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 43388640 - 43388806
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||| |||  |||||||||||| ||||||    
T  43388640 caaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattatgt--gagagaaaagtttgagtat 43388737  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| |||||||||||||| |||||||||||||||    
T  43388738 ttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttga 43388806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 25332741 - 25332574
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  25332741 caaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtat 25332642  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||       ||||||||| |||| ||||||||  |||| ||||||||||    
T  25332641 ttattgaggataaagttggaag-aaaaaattaaagttgcattggaaatgtaaggcgacgttcattttga 25332574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 10580851 - 10581007
Alignment:
Q  28 caattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggtta 127  Q
    |||||||| |||||||| | |||||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  10580851 caattttattaaaataatcttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggta 10580950  T
Q  128 atgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    | ||||||||       ||||||||||||||||||| ||||  || |||||||||||    
T  10580951 aagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttga 10581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 39866654 - 39866820
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| ||||||| || || | |||||||||||||||| |||||||||||||||||||| |||| || ||||||    
T  39866654 caaatgtcatagcaattttactaaaataaccttactttacaagaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtat 39866753  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||| | ||| ||||||||       ||||| ||| |||| ||||||||| |||||||||||||    
T  39866754 ttattgaaggtaaagttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcatttt 39866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 4566110 - 4566256
Alignment:
Q  22 tcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 121  Q
    ||||||||||||||||||||||||| || ||||||| || |||| ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  4566110 tcataacaattttactaaaataaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgagagagaaaagttggactctttattg 4566209  T
Q  122 aggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaa 168  Q
    | | ||| |||| ||        ||||||||||||| ||||||||||    
T  4566210 atgataaagttgaaaaaaaaaaattaaagttgtattaaaaatgtaaa 4566256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 14698159 - 14698064
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||||||    
T  14698159 caaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttgga 14698064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 7743538 - 7743406
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||| ||||||||       |||    
T  7743538 tactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtga--gagaaaagttggactatttattgagggtaaagttggaagaaaaagatta 7743441  T
Q  148 aagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||| |||||||||  ||||||||||||    
T  7743440 aagttgtattggaaatgtaaagtgacattcatttt 7743406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 4840725 - 4840875
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || |||||||||| || |||||||| |||||||||||||||||| |||||  | |||||||||| ||||||||||||||| ||| |    
T  4840725 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaactgtgt--gggagaaaagtttgagtatttattgagggtaaag 4840822  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttg 183  Q
    |||||||       |||||||||||||| |||||||||  |||||||||||||    
T  4840823 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 4840875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 37107023 - 37106886
Alignment:
Q  26 aacaattttactaaaataaccgtactttataa--aaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 123  Q
    |||| |||||||||| |  || ||||||||||  ||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||    
T  37107023 aacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttattaag 37106926  T
Q  124 gttaatgttggaagnnnnnnnttaaagttgtattgaaaat 163  Q
    | ||| ||||||||       |||||||||||||||||||    
T  37106925 ggtaaagttggaagaaaaaaattaaagttgtattgaaaat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 1298778 - 1298929
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || |||||||||| || |||||||| |||||||||||||||||||| |||  |||||||||||||||| ||||||||||| ||| |    
T  1298778 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagagaaaagttggagaatttattgaggataaag 1298875  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    || || |       |||||||||||||  |||||||||  ||||||||||||||    
T  1298876 ttcgatgagaaaaattaaagttgtattagaaatgtaaagtgacattcattttga 1298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 36360365 - 36360526
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| |  || || ||||||| || |||| ||||||||||||| ||||||||||||||    |||||||||| |||||| ||||||    
T  36360365 cataacacttttactaaactgcccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgt----gagaaaagtttgagtatatattga 36360460  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttgatttt 188  Q
    || ||| |||| |||       |||||||||||||||||||| |||  || |||||||||||||||    
T  36360461 gggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcattttgatttt 36360526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 24775350 - 24775194
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 123  Q
    |||||| ||||||||||||   | |||||||||| || || ||||||||||||||  ||||||||||||||||  ||||||||||| |||||||||||||    
T  24775350 ataacacttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtga--gagaaaagttgaagtatttattgag 24775253  T
Q  124 gttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    | |||  |||| ||       ||||| ||||||||||||||||||  |||| |||||||    
T  24775252 ggtaaacttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcatttt 24775194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 34225912 - 34225835
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||| |||||||||||| |  || |||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  34225912 cataataattttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 34225835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 43460927 - 43460792
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || ||||||||||  | |||||||| ||||||||| |||||||||| |||||||||  ||||||| |||||||||||||| ||| |    
T  43460927 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatgtgagaga--aaagttgaagtatttattgagggtaacg 43460830  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaa 168  Q
    |||||||       |||||||||||||| |||||||||    
T  43460829 ttggaagagaaaacttaaagttgtattggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 1360300 - 1360180
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    ||||||||||||||||||||||||||||||| |   |||||||||||| |||||||||||||| |||  |||| ||       |||||||||||||| ||    
T  1360300 aagacaaacttaaagttgcattgaaaattgttt--aagagaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtattggaa 1360203  T
Q  162 atgtaaaacgacattcattttga 184  Q
    ||| |||  ||||||||||||||    
T  1360202 atgcaaagtgacattcattttga 1360180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 4536694 - 4536577
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||| |||||||||||||||||||||||||||     |||||| |||||||| |||||| ||| ||||| ||       |||||||||||||| ||    
T  4536694 aagacaaatttaaagttgcattgaaaattgtgtgag-----aaagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaa 4536600  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  4536599 atgtaaagtgacattcattttga 4536577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 16316864 - 16316712
Alignment:
Q  30 attttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaat 129  Q
    ||||||||||| |  || |||| ||||| || |||||||| ||||||||||||||||||||||||  |||| |||||||||| ||||||||||   |||     
T  16316864 attttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagataaaagttggaatatttattgaaagtaaa 16316767  T
Q  130 gttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
     |||||||       |||||||||||||| |||| ||||  |||||||| |||||    
T  16316766 tttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcaatttga 16316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 40987272 - 40987418
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| |||||||||| |  || |||||||||| || |||| ||| ||||||||||||||||||||||    |||||||||||||||         ||    
T  40987272 cataacacttttactaaattgtccttactttataagaaaaagataaatttaaagttgcattgaaaattgt----gagagaaaagttgga---------ga 40987358  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || ||| ||||||||       |||||||||||||||||||||||| |||||||||||||    
T  40987359 gggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcatttt 40987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 4766227 - 4766288
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  4766227 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttgga 4766288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 40410580 - 40410518
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  40410580 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--cagagaaaagttggag 40410518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 43344213 - 43344370
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||||||||| ||||  | || |||||||||| || |||| ||  ||||||||| |||||||||| |||  ||||||||| || ||||||||||| |    
T  43344213 cataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgt--gagagaaaaattagagtatttattaa 43344310  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
     | ||| ||||||||       ||||||||||||||||||| |||   ||||||||||||||    
T  43344311 aggtaaagttggaag--aaaaattaaagttgtattgaaaatataaggtgacattcattttga 43344370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 11171905 - 11171808
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    ||||||| |||||||||| || ||  |||||||   || ||||||||||||||||| ||||| |||| ||| || |||||||| ||| ||||||||||    
T  11171905 cataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattggaaatagtgagaaagagaaaaattgaagtatttatt 11171808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 1381901 - 1381816
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||| |||||||||| |   | |||||||||| || |||| ||||||||| ||||||||||||||||    ||||||||||||||||    
T  1381901 cataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaattgt----gagagaaaagttggag 1381816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 14378239 - 14378315
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||| |||||||||| |  || |||||||||| || |||| ||| |||||||||||||||||||| || ||||||    
T  14378239 ataacacttttactaaactgcccttactttataagaaaaagataaatttaaagttgcattgaaaattatgcgagaga 14378315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 4766298 - 4766337
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  4766298 ttaaagttgtattgaaaatgtaaattgacattcattttga 4766337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 14698054 - 14698015
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  14698054 ttaaagttgcattgaaaatgtaaagcgacattcattttga 14698015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 18374793 - 18374911
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||  ||||| ||| ||||||||||||| || ||| ||||||| ||||||||||||||| ||| ||||||||       ||||| || ||||| ||    
T  18374793 aagacaagtttaaaattgtattgaaaattgtgaga-aga-aaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattatattggaa 18374890  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||  ||||||||||||    
T  18374891 atgtaaagtgacattcatttt 18374911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 34225815 - 34225776
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  34225815 ttaaagttgtattgaaaatgtaaagtgacattcattttga 34225776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 42970024 - 42969977
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||| | || || |||||||||||||||||||||||||||||    
T  42970024 tttataaaaaaatgataaccttaaagttgcattgaaaattgtgtgaga 42969977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 29795217 - 29795276
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggag 112  Q
    ||||||| || |||||||  ||||||||||||||||||||||||  || |||||||||||||    
T  29795217 tttataagaaaaagacaactttaaagttgcattgaaaattgtgt--gaaagaaaagttggag 29795276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 14378334 - 14378371
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  14378334 ttaaagttgtattgaaaatgtaaagtgacattcatttt 14378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 45147991 - 45148044
Alignment:
Q  48 tactttataaaaataag-acaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||||||||| ||  |||| |||||||||||||| ||||||||||||||||    
T  45147991 tactttataaaaaaaaatacaatcttaaagttgcattaaaaattgtgtgagaga 45148044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 14541729 - 14541895
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  14541729 caaatgtcataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaat--tgtgagagagaaaagttgaagtat 14541826  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| ||| ||| ||||||||       |||||||||||||  |||||||||  ||||||||||||||    
T  14541827 ttattaaggataaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttga 14541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 34461565 - 34461734
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||| | ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  34461565 caaatgtcataacaattttactaaaataatcttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagttt 34461664  T
Q  116 ttattgaggttaatgttggaag-nnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||| ||| ||||||||        |||||||||||||| |||||||||  ||||||||||||||    
T  34461665 ttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 34461734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 13109158 - 13108991
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| ||||||  |||||||||||||||||| || ||||||| || |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  13109158 caaatgtcatagtaattttactaaaataaccttattttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagttggagtat 13109059  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| ||| ||  ||||||||       ||||||||| ||||||||||||||| ||||||||||||||    
T  13109058 ttattaaggatagagttggaag-aaaaaattaaagttgcattgaaaatgtaaaatgacattcattttga 13108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 34168195 - 34168359
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||         ||||||    
T  34168195 caaatgtcatagcaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagaga--------agagtat 34168286  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttgatttt 188  Q
    || |||||| ||| ||||||||       ||||||||||||||||||||||||  ||||||||||||||||||    
T  34168287 ttcttgagggtaaagttggaagaaaaaagttaaagttgtattgaaaatgtaaagtgacattcattttgatttt 34168359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 18673082 - 18673247
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtat 115  Q
    |||| |||||||||||||||||||||||||| ||||| || | || || ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  18673082 caaatgtcataacaattttactaaaataaccttactt-atcagaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtat 18673180  T
Q  116 ttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||| | | ||| ||||||||       ||||||| | |||||||||||||| |||||||||||||    
T  18673181 ttattaaaggtaaagttggaagaaaaaaattaaagtcgcattgaaaatgtaaagcgacattcatttt 18673247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 8471428 - 8471333
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8471428 caaatgtcataccaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 8471333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 27416672 - 27416504
Alignment:
Q  16 caaaagtcataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattg--tgtgagagagaaaagttggagt 113  Q
    |||| |||||| ||||||||||||||||||| |||||||||| || |||||||||||| | |||||||||||||||  ||||||||| ||||||||||||    
T  27416672 caaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagt 27416573  T
Q  114 atttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||| ||| |||||| |        ||||||||||||| |||||||||  ||||||||||||||    
T  27416572 atttattgagggtaaagttggacgaaaaac--taaagttgtattggaaatgtaaagtgacattcattttga 27416504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 7612635 - 7612503
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| ||||||||       |||    
T  7612635 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga--gagaaaagttggagtatttatttagggtaaagttggaagagaaaactta 7612538  T
Q  148 aagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    | |||||||||||||||||||  ||||||||||||    
T  7612537 atgttgtattgaaaatgtaaagtgacattcatttt 7612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 27109836 - 27109970
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || | ||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||||| ||| ||||||||       |||    
T  27109836 tactttataagaaaaggacaaacttaaagttgcattggaaattgtgt--gagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaatta 27109933  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||| ||||| |||  ||||||||||||||    
T  27109934 aagttgtattggaaatggaaagtgacattcattttga 27109970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 11257699 - 11257547
Alignment:
Q  26 aacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggt 125  Q
    |||| |||||||||| || |  || ||||||| ||  ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |    
T  11257699 aacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaaattgtgtga--gagaaaagttgaagtatttattgagat 11257602  T
Q  126 taatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||| ||||||||       ||||||||||||| ||||||||||  ||||||||||||    
T  11257601 taaagttggaag--aaaaattaaagttgtattaaaaatgtaaagtgacattcatttt 11257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 22601272 - 22601139
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnntta 147  Q
    |||||||||| || ||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||| |||| ||| ||||||||       |||    
T  22601272 tactttataagaaaaagacaaacttaaagttgcattgaaaattctgt--gagagaaaggttggagtatttatcgagggtaaagttggaag-aaacaatta 22601176  T
Q  148 aagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||| |||||||||  ||||||||||||||    
T  22601175 aagttgtattggaaatgtaaagtgacattcattttga 22601139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 3095533 - 3095651
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||| ||| ||||| ||       |||||||||||||||||    
T  3095533 aagacaaacttaaagttgcattgaaaa--gtgtgcgagagaaaagttgaagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 3095630  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||   |||||||||||    
T  3095631 atgtaaagtaacattcatttt 3095651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 8382507 - 8382625
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||| ||| ||||  ||       |||||||||||||||||    
T  8382507 aagacaaacttatagttgcattgaaaattgtgt--gagagaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtattgaaa 8382604  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||  ||||||||||||    
T  8382605 atgtaaagtgacattcatttt 8382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 35052587 - 35052476
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaac 170  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||||| |  || |||| |||       |||||||||||||| |||||||||||    
T  35052587 ttaaagttgcattgaaaattatgtgagagagaaaattttgagtatttattgaagggaaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaac 35052488  T
Q  171 gacattcatttt 182  Q
    ||||||||||||    
T  35052487 gacattcatttt 35052476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 9022519 - 9022400
Alignment:
Q  62 aagacaaacttaaa-gttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaa 160  Q
    |||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||| ||| ||||||||       |||||||||||||| |    
T  9022519 aagacaaacttaaaagttgcattgaaaattgtgtgagaaa--aaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgga 9022422  T
Q  161 aatgtaaaacgacattcatttt 182  Q
    || |||||  ||||||||||||    
T  9022421 aacgtaaagtgacattcatttt 9022400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 32661428 - 32661326
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||| ||| ||||| ||       |||||||||||||||||    
T  32661428 aagacaaacttaaagttgtattgaaaattgtgtga--gagaaaagttagagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaa 32661331  T
Q  162 atgta 166  Q
    |||||    
T  32661330 atgta 32661326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 30789097 - 30788940
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    ||||||| ||||| |||| |  || |||||||||| || |||||||| ||||||||| |||||||||| |||||||||  |||||||||||||||| | |    
T  30789097 cataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagaga--aaagttggagtatttactaa 30789000  T
Q  123 ggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    || ||| ||| ||||       |||||||||||||||| |||||||  |||||| |||||    
T  30788999 gggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttatttt 30788940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 32326754 - 32326879
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaa-gnnnnnnnttaaagttgtattgaa 160  Q
    |||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||| || |||  ||| || |       ||||||||||||||||    
T  32326754 aagacaaatttaaagttgcattgaaaattgtgt--gagaaaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagttgtattgaa 32326851  T
Q  161 aatgtaaaacgacattcattttgatttt 188  Q
    ||||||||  |||||| |||||||||||    
T  32326852 aatgtaaagtgacatttattttgatttt 32326879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 32271668 - 32271575
Alignment:
Q  28 caattttactaaaataaccgtactttataa-aaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatt 120  Q
    ||||||||||||||||| | ||||| |||| ||| || | ||||||||| |||||||||||||| ||||||||| |||||||| ||||||||||    
T  32271668 caattttactaaaataatcttacttgataagaaagaaaaaaaacttaaaattgcattgaaaattatgtgagagataaaagttgaagtatttatt 32271575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 36915488 - 36915370
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    ||||||||||||||||||||||||||||||||    ||| ||||  | || |||||||||| | ||| ||||||||       |||||||||||||||||    
T  36915488 aagacaaacttaaagttgcattgaaaattgtg----agaaaaaatgttgaatatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaa 36915393  T
Q  162 atgtaaaacgacattcattttga 184  Q
    |||||||  ||||||||||||||    
T  36915392 atgtaaagtgacattcattttga 36915370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 7129414 - 7129362
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  7129414 tactttataagaataagacaaaattaaagttgcattggaaattgtgtgagaga 7129362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 11336048 - 11336100
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  11336048 tactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaga 11336100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 182
Target Start/End: Complemental strand, 42946233 - 42946127
Alignment:
Q  74 aagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgac 173  Q
    |||||||||| |||||||||||||||| |||  || ||||||||||||||| |||  ||| |||       ||||||||||||| ||||||||||| |||    
T  42946233 aagttgcattaaaaattgtgtgagagaaaaa--ttagagtatttattgagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgac 42946136  T
Q  174 attcatttt 182  Q
    |||||||||    
T  42946135 attcatttt 42946127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 5044242 - 5044375
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag-nnnnnnntt 146  Q
    ||||||||||||| || ||||| ||||||||| ||| ||||||||||  || |||||||||| |||||||||||||  ||| ||||||||        ||    
T  5044242 tactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgt--gatagaaaagttgaagtatttattgagaataaagttggaagaaaaaaaatt 5044339  T
Q  147 aaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||| || |||||||||||||||| || |||||||||    
T  5044340 aaaattatattgaaaatgtaaaatgatattcatttt 5044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 38329045 - 38329118
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgag 97  Q
    ||||||| |||||||||| |  || ||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  38329045 cataacacttttactaaactg-ccttactttataatcaaaagacaaacttaaagttgcattgaaaattgtgtgag 38329118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 43938244 - 43938186
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattga 122  Q
    |||| ||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||    
T  43938244 aagataaacttaaagttgcattaaaaa--gtgtgcgagagaaaagttggagtatttattga 43938186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 5588485 - 5588617
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattg-----tgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnt 145  Q
    ||||||| || ||||||||||||||||| ||||  | ||||     |||| |||||||||||| ||||||||||||| | ||| ||||||||       |    
T  5588485 tttataagaaaaagacaaacttaaagttacattttacattgaaatttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaat 5588584  T
Q  146 taaagttgtattgaaaatgtaaaacgacattca 178  Q
    ||||||||||||| |||||||||  ||||||||    
T  5588585 taaagttgtattggaaatgtaaattgacattca 5588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 26439086 - 26439051
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||||||||||||||||||||||||||||||||    
T  26439086 acaaacttaaagttgcattgaaaattgtgtgagaga 26439051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 16209064 - 16209026
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  16209064 aagacaaacttaaagttgcattgaaaattatgtgagaga 16209026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 39970448 - 39970410
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  39970448 aagacaaacttaaagttgcattgaaaattgtgcgagaga 39970410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 41790158 - 41790208
Alignment:
Q  50 ctttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||| || |||||||| ||||||||| ||||||||||||||||||||    
T  41790158 ctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgagaga 41790208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 6839369 - 6839292
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| |||||||||| |  |  |||||||||| || ||||||||| |||| |||||||||||||| |||||||||    
T  6839369 cataacacttttactaaattgcctttactttataagaaaaagacaaacataaaattgcattgaaaattatgtgagaga 6839292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 1774086 - 1774130
Alignment:
Q  48 tactttataaaaataagacaaacttaaagttgcattgaaaattgt 92  Q
    |||||||||| || |||||||| ||||||||||||||||||||||    
T  1774086 tactttataagaaaaagacaaaattaaagttgcattgaaaattgt 1774130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 18666536 - 18666621
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 111  Q
    |||||| |||||||||| |  || |||||||||| || |||||||   |||||||||||| ||||||||||||||  |||||||||||    
T  18666536 ataacacttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgaga--gaaaagttgga 18666621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 16208992 - 16208953
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  16208992 ttaaagttgtattgaaaatgtaaagtgacattcattttga 16208953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 45187314 - 45187361
Alignment:
Q  51 tttataaaaataagacaaacttaaagttgcattgaaaattgtgtgaga 98  Q
    ||||||| || ||||||||||||||||||| |||||||||||| ||||    
T  45187314 tttataagaaaaagacaaacttaaagttgctttgaaaattgtgagaga 45187361  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 1774170 - 1774207
Alignment:
Q  145 ttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  1774170 ttaaagttgtattgaaaatgtaaattgacattcatttt 1774207  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 37185680 - 37185734
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtattta 118  Q
    |||||||||||||||||||||||||||   | |  ||||||||||||||||||||||    
T  37185680 aagacaaacttaaagttgcattgaaaa--atatacgagagaaaagttggagtattta 37185734  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 156350 - 156314
Alignment:
Q  64 gacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  156350 gacaaacttaaagttgtattgaaaattgtgcgagaga 156314  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 41414948 - 41414920
Alignment:
Q  70 cttaaagttgcattgaaaattgtgtgaga 98  Q
    |||||||||||||||||||||||||||||    
T  41414948 cttaaagttgcattgaaaattgtgtgaga 41414920  T

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Target: scaffold0003 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 321884 - 321731
Alignment:
Q  29 aattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaa 128  Q
    |||||||||||||||||| |||||||||  || |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||| |||    
T  321884 aattttactaaaataaccttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaa 321785  T
Q  129 tgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcatttt 182  Q
     ||||||||       |||||||||||||| ||||||||| |||||||||||||    
T  321784 agttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcatttt 321731  T

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Target: scaffold0238 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 16031 - 16192
Alignment:
Q  24 ataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 123  Q
    |||||| |||||||||| || |  ||||||||||||| | |||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||||    
T  16031 ataacatttttactaaactacctttactttataaaaa-atgacaaacttaaagttgcattgaaaattgtgt--gagagaaaggttggaatatttattgag 16127  T
Q  124 gttaatgttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttgatttt 188  Q
    | ||| ||| ||||       ||||||||||||| ||||| ||||  |||||| ||||| |||||    
T  16128 ggtaaagtttgaagaaaaaaattaaagttgtattaaaaatataaagagacatttattttaatttt 16192  T

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Target: scaffold0119 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 1697 - 1546
Alignment:
Q  31 ttttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatg 130  Q
    |||||||||| |  || |||||||||| || |||||||| |||||||||||||||||||| |||  ||||||||||||||||  |||||||||| ||| |    
T  1697 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagagaaaagttggagattttattgaggataaag 1600  T
Q  131 ttggaagnnnnnnnttaaagttgtattgaaaatgtaaaacgacattcattttga 184  Q
    ||||| |       |||||||||||||| |||| ||||  ||||||||||||||    
T  1599 ttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 1546  T

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Target: scaffold0519 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 7732 - 7802
Alignment:
Q  65 acaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag 137  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |||| ||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgt--gagagaaaagttgaagtatttattgagattaaagttggaag 7802  T

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Target: scaffold0886 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 4098 - 4211
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataa-gacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattg 121  Q
    ||||||| |||||| ||| |  || ||||||||||||| || |||||||||||||||  |||||||||| |||||||  |||||||||||||||||||||    
T  4098 cataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaaaattatgtgaga--gaaaagttggagtatttattg 4195  T
Q  122 aggttaatgttggaag 137  Q
    ||| ||| ||||||||    
T  4196 aggataaagttggaag 4211  T

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Target: scaffold0194 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 8274 - 8161
Alignment:
Q  71 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaag--nnnnnnnttaaagttgtattgaaaatgtaaa 168  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||| |||||||||| |||| |||         ||||||||||||||||||||||||    
T  8274 ttaaagttgctttgaaaattgtgtgagaga--aaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaa 8177  T
Q  169 acgacattcattttga 184  Q
      ||||||||||||||    
T  8176 ttgacattcattttga 8161  T

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Target: scaffold0072 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 12072 - 12148
Alignment:
Q  23 cataacaattttactaaaataaccgtactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagaga 100  Q
    ||||||| |||||||||| |  || |||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  12072 cataacacttttactaaactg-ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 12148  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 158223 - 158154
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttg 133  Q
    ||||||||||||||||||||||||||||  | || ||||||||||||| |||||||||||||| ||| ||||    
T  158223 aagacaaacttaaagttgcattgaaaat--tatgcgagagaaaagttgtagtatttattgagggtaaagttg 158154  T

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Target: scaffold0189 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 13088 - 13206
Alignment:
Q  62 aagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgaggttaatgttggaagnnnnnnnttaaagttgtattgaaa 161  Q
    |||||||| |||||||| ||||||||||  ||||   ||||||||||| |||||||||||||| ||| ||||| ||       ||||| |||||||| ||    
T  13088 aagacaaaattaaagttacattgaaaat--tgtgccggagaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtattggaa 13185  T
Q  162 atgtaaaacgacattcatttt 182  Q
    |||||||  ||| ||||||||    
T  13186 atgtaaagtgacgttcatttt 13206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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