View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2698_low_9 (Length: 384)
Name: NF2698_low_9
Description: NF2698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2698_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 367
Target Start/End: Complemental strand, 9029809 - 9029463
Alignment:
| Q |
21 |
ttaattatcgatgaatgcttgagagcaaataaagtatcctaaaaagcaatttgcaaagttaatagatagatagttaatatagttaaccatagtttagtta |
120 |
Q |
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| T |
9029809 |
ttaattatcgatgaatgtttgagagcaaataaaatatcctaaaaagcaatttgcaaagttaatagatagatagttaatatagttaaccatagtttagtta |
9029710 |
T |
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| Q |
121 |
gcccattaatgatattagaatataaccctcacttttaccactttattccctcttgtaatgcaactcgtattgttgatgaaataaaataagttatctttgc |
220 |
Q |
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| T |
9029709 |
gcccattaatgatattagaatataaccctcacttttaccactttattccctcttgtaatgcaactcgtattgttgatgaaataaaataagttatctttgc |
9029610 |
T |
|
| Q |
221 |
ctcaaaaataaaataaaatgaattagtacaatatctctaagatatgtgagttatttctcttataagggannnnnnnagattgtggttatttctcttatca |
320 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
9029609 |
ctcaaaaataaaataaaatgaattagtacaatatctctaagatatgtgagttatttctcttataagggatttttttagattgtggttatttctcttatca |
9029510 |
T |
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| Q |
321 |
aatattgtgacaccttccttctctcaccatattgacatatttcatct |
367 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9029509 |
aatattgtgacaccttccttctctcaccatattgacatatttcatct |
9029463 |
T |
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