View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2700-Insertion-8 (Length: 182)

Name: NF2700-Insertion-8
Description: NF2700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2700-Insertion-8
NF2700-Insertion-8
[»] chr5 (42 HSPs)
chr5 (9-182)||(31466598-31466771)
chr5 (7-182)||(659438-659613)
chr5 (18-173)||(6746781-6746936)
chr5 (12-179)||(20044393-20044560)
chr5 (18-182)||(18468423-18468587)
chr5 (12-122)||(41586794-41586904)
chr5 (11-122)||(27911814-27911925)
chr5 (13-122)||(20504654-20504763)
chr5 (19-122)||(18510208-18510311)
chr5 (19-112)||(15355365-15355458)
chr5 (19-112)||(23666716-23666809)
chr5 (19-112)||(10756567-10756660)
chr5 (19-122)||(31544397-31544500)
chr5 (18-122)||(20044353-20044458)
chr5 (7-88)||(31544622-31544703)
chr5 (13-122)||(659401-659511)
chr5 (18-122)||(18468386-18468491)
chr5 (18-112)||(6746745-6746840)
chr5 (7-88)||(10756783-10756865)
chr5 (7-88)||(34477727-34477809)
chr5 (19-122)||(34477931-34478035)
chr5 (7-88)||(15355160-15355242)
chr5 (7-88)||(23666932-23667014)
chr5 (7-88)||(41586601-41586682)
chr5 (13-112)||(31466698-31466798)
chr5 (7-181)||(20504552-20504725)
chr5 (96-182)||(10756594-10756679)
chr5 (96-182)||(15355346-15355431)
chr5 (96-182)||(23666743-23666828)
chr5 (18-88)||(27912038-27912108)
chr5 (96-182)||(34477912-34477998)
chr5 (96-181)||(27911852-27911936)
chr5 (96-181)||(41586782-41586866)
chr5 (100-182)||(31544434-31544515)
chr5 (90-173)||(31544634-31544716)
chr5 (96-173)||(18510188-18510265)
chr5 (7-88)||(18510005-18510086)
chr5 (112-155)||(27912067-27912110)
chr5 (115-173)||(10756795-10756852)
chr5 (115-173)||(15355173-15355230)
chr5 (115-173)||(23666944-23667001)
chr5 (115-173)||(34477740-34477797)
[»] chr2 (24 HSPs)
chr2 (9-182)||(21519045-21519218)
chr2 (12-122)||(22405141-22405251)
chr2 (19-122)||(35216482-35216585)
chr2 (19-112)||(36559657-36559750)
chr2 (19-122)||(19502848-19502951)
chr2 (7-77)||(19502645-19502715)
chr2 (13-122)||(21519145-21519255)
chr2 (7-88)||(36559453-36559535)
chr2 (13-76)||(6259745-6259808)
chr2 (7-155)||(6259454-6259602)
chr2 (28-104)||(31733685-31733761)
chr2 (7-88)||(35216278-35216360)
chr2 (96-182)||(35216463-35216548)
chr2 (12-88)||(6259555-6259631)
chr2 (109-181)||(22405142-22405213)
chr2 (96-182)||(36559638-36559723)
chr2 (25-122)||(13828954-13829050)
chr2 (90-182)||(19502632-19502723)
chr2 (96-182)||(19502829-19502914)
chr2 (109-155)||(31733480-31733526)
chr2 (115-181)||(36559466-36559531)
chr2 (112-173)||(31733673-31733733)
chr2 (12-88)||(31733479-31733555)
chr2 (96-174)||(6259732-6259809)
[»] chr1 (47 HSPs)
chr1 (7-182)||(14098610-14098785)
chr1 (18-182)||(31736226-31736390)
chr1 (18-182)||(25127225-25127389)
chr1 (12-122)||(6996909-6997019)
chr1 (12-117)||(28202148-28202253)
chr1 (12-122)||(16430329-16430439)
chr1 (12-122)||(31423823-31423933)
chr1 (20-122)||(28842021-28842123)
chr1 (18-122)||(50077587-50077691)
chr1 (11-122)||(20301795-20301906)
chr1 (19-122)||(51751701-51751804)
chr1 (18-122)||(27337641-27337745)
chr1 (19-122)||(47179026-47179129)
chr1 (13-122)||(25249440-25249549)
chr1 (7-173)||(50077290-50077455)
chr1 (13-122)||(25127188-25127298)
chr1 (13-122)||(31736317-31736427)
chr1 (18-122)||(16227831-16227936)
chr1 (11-122)||(13126193-13126303)
chr1 (28-122)||(14098727-14098822)
chr1 (18-88)||(20302020-20302090)
chr1 (12-104)||(31423634-31423726)
chr1 (7-173)||(31423533-31423698)
chr1 (18-77)||(51751937-51751996)
chr1 (7-88)||(16228059-16228141)
chr1 (7-88)||(47179251-47179333)
chr1 (7-155)||(25249149-25249297)
chr1 (10-181)||(28202050-28202220)
chr1 (12-104)||(50077391-50077483)
chr1 (90-181)||(14098597-14098687)
chr1 (7-181)||(6996947-6997116)
chr1 (112-182)||(27337639-27337708)
chr1 (96-182)||(47179063-47179148)
chr1 (42-178)||(13126129-13126262)
chr1 (80-155)||(16430582-16430657)
chr1 (96-182)||(16227868-16227956)
chr1 (12-65)||(16430576-16430629)
chr1 (112-173)||(20302032-20302092)
chr1 (12-88)||(25249250-25249326)
chr1 (19-88)||(10742240-10742308)
chr1 (124-181)||(28842059-28842115)
chr1 (96-173)||(51751747-51751823)
chr1 (19-118)||(155220-155318)
chr1 (96-179)||(31423811-31423893)
chr1 (24-142)||(8954147-8954263)
chr1 (90-143)||(31423520-31423573)
chr1 (12-88)||(8954105-8954181)
[»] chr7 (46 HSPs)
chr7 (12-182)||(20298786-20298956)
chr7 (7-181)||(21679488-21679662)
chr7 (21-181)||(7470734-7470894)
chr7 (18-182)||(38395710-38395874)
chr7 (18-181)||(7092875-7093038)
chr7 (13-182)||(20298689-20298859)
chr7 (19-182)||(28486974-28487137)
chr7 (12-122)||(44726311-44726421)
chr7 (19-122)||(43912-44015)
chr7 (19-122)||(1047801-1047904)
chr7 (19-112)||(22136486-22136579)
chr7 (19-112)||(40551513-40551606)
chr7 (13-122)||(20298652-20298762)
chr7 (13-122)||(21679450-21679560)
chr7 (7-88)||(1047598-1047679)
chr7 (22-122)||(7350168-7350268)
chr7 (7-181)||(9680274-9680447)
chr7 (12-111)||(24815819-24815917)
chr7 (13-122)||(7092966-7093076)
chr7 (7-104)||(7349961-7350059)
chr7 (11-117)||(9680052-9680158)
chr7 (7-88)||(31156594-31156675)
chr7 (19-122)||(31156797-31156901)
chr7 (7-88)||(22136701-22136783)
chr7 (7-88)||(40551728-40551810)
chr7 (7-88)||(44138-44219)
chr7 (13-112)||(38395683-38395783)
chr7 (13-122)||(7470822-7470932)
chr7 (69-181)||(24815780-24815890)
chr7 (13-112)||(28486947-28487047)
chr7 (96-182)||(43949-44034)
chr7 (96-182)||(1047782-1047867)
chr7 (96-182)||(31156778-31156864)
chr7 (96-182)||(22136513-22136598)
chr7 (96-182)||(40551540-40551625)
chr7 (33-122)||(4509664-4509752)
chr7 (33-122)||(4511506-4511594)
chr7 (109-181)||(44726349-44726420)
chr7 (90-173)||(44150-44232)
chr7 (90-173)||(1047585-1047667)
chr7 (96-179)||(7350146-7350228)
chr7 (90-173)||(31156581-31156663)
chr7 (115-173)||(7349974-7350031)
chr7 (115-173)||(22136713-22136770)
chr7 (115-173)||(40551740-40551797)
chr7 (19-90)||(6067823-6067896)
[»] chr8 (14 HSPs)
chr8 (7-182)||(15072231-15072406)
chr8 (18-122)||(27828688-27828792)
chr8 (19-122)||(43081320-43081423)
chr8 (19-122)||(41384089-41384192)
chr8 (13-122)||(15072194-15072304)
chr8 (18-88)||(27828915-27828985)
chr8 (7-77)||(41384324-41384394)
chr8 (7-88)||(18812492-18812573)
chr8 (24-104)||(17849337-17849416)
chr8 (7-88)||(43081545-43081627)
chr8 (112-173)||(27828927-27828987)
chr8 (100-182)||(43081357-43081438)
chr8 (109-155)||(41384342-41384388)
chr8 (90-173)||(18812504-18812586)
[»] chr3 (54 HSPs)
chr3 (20-182)||(43227760-43227922)
chr3 (7-182)||(18097517-18097692)
chr3 (18-182)||(42991678-42991842)
chr3 (7-173)||(28137926-28138092)
chr3 (7-180)||(28100693-28100866)
chr3 (18-182)||(4308926-4309090)
chr3 (18-179)||(35918594-35918755)
chr3 (19-122)||(11169744-11169847)
chr3 (21-124)||(890702-890805)
chr3 (11-122)||(53916460-53916571)
chr3 (24-122)||(3316043-3316141)
chr3 (21-122)||(5899056-5899157)
chr3 (19-112)||(10956861-10956954)
chr3 (11-122)||(43422257-43422368)
chr3 (24-122)||(457549-457647)
chr3 (19-122)||(6064305-6064409)
chr3 (13-112)||(18097619-18097719)
chr3 (13-122)||(4309017-4309127)
chr3 (13-122)||(28138028-28138138)
chr3 (13-122)||(43227723-43227833)
chr3 (7-88)||(3306342-3306423)
chr3 (7-88)||(6064101-6064183)
chr3 (96-182)||(6064286-6064372)
chr3 (13-122)||(42991641-42991751)
chr3 (7-76)||(5899293-5899362)
chr3 (18-122)||(23636422-23636526)
chr3 (9-88)||(43422067-43422145)
chr3 (7-77)||(10956658-10956728)
chr3 (96-182)||(11169781-11169866)
chr3 (13-122)||(28100795-28100905)
chr3 (18-77)||(7607071-7607130)
chr3 (7-88)||(457774-457856)
chr3 (13-122)||(35918685-35918795)
chr3 (26-88)||(53916286-53916348)
chr3 (7-155)||(890403-890550)
chr3 (7-88)||(11169969-11170050)
chr3 (90-178)||(28100680-28100767)
chr3 (80-155)||(23636485-23636560)
chr3 (96-182)||(457586-457671)
chr3 (96-182)||(10956842-10956927)
chr3 (124-182)||(35918604-35918661)
chr3 (112-173)||(7607069-7607129)
chr3 (90-179)||(28137913-28138001)
chr3 (109-181)||(5899285-5899356)
chr3 (90-173)||(18097504-18097586)
chr3 (96-173)||(5899102-5899179)
chr3 (115-181)||(6064114-6064179)
chr3 (12-77)||(890503-890568)
chr3 (124-173)||(3316089-3316137)
chr3 (96-173)||(43422246-43422322)
chr3 (96-167)||(890680-890751)
chr3 (109-173)||(3306354-3306417)
chr3 (89-173)||(11169981-11170064)
chr3 (114-181)||(43422076-43422141)
[»] chr4 (49 HSPs)
chr4 (7-182)||(12396500-12396675)
chr4 (7-182)||(12401442-12401617)
chr4 (7-182)||(3825212-3825389)
chr4 (22-182)||(16454778-16454938)
chr4 (12-181)||(18535532-18535696)
chr4 (11-122)||(9174975-9175086)
chr4 (12-122)||(14788220-14788330)
chr4 (12-122)||(22801559-22801669)
chr4 (19-122)||(22045228-22045331)
chr4 (12-122)||(36920320-36920430)
chr4 (12-122)||(47564192-47564302)
chr4 (22-122)||(22781252-22781353)
chr4 (18-122)||(16932659-16932764)
chr4 (11-122)||(36379662-36379773)
chr4 (13-122)||(16454741-16454851)
chr4 (7-88)||(22045025-22045106)
chr4 (36-110)||(24879959-24880033)
chr4 (7-88)||(16932455-16932536)
chr4 (19-122)||(11007080-11007184)
chr4 (13-122)||(12396602-12396712)
chr4 (13-122)||(12401544-12401654)
chr4 (96-182)||(22781230-22781316)
chr4 (7-88)||(22133082-22133163)
chr4 (7-181)||(14788119-14788292)
chr4 (7-88)||(9174779-9174861)
chr4 (96-182)||(11007061-11007147)
chr4 (96-182)||(16932639-16932727)
chr4 (96-173)||(36379708-36379784)
chr4 (18-102)||(18535630-18535714)
chr4 (11-149)||(3577635-3577775)
chr4 (7-88)||(22781044-22781127)
chr4 (7-181)||(22801458-22801631)
chr4 (96-182)||(22045209-22045294)
chr4 (96-181)||(9174964-9175048)
chr4 (7-155)||(36379916-36380063)
chr4 (90-173)||(16932442-16932524)
chr4 (7-173)||(36920220-36920384)
chr4 (90-178)||(16454879-16454965)
chr4 (24-122)||(3577453-3577553)
chr4 (11-122)||(5100253-5100364)
chr4 (90-173)||(22045012-22045094)
chr4 (7-173)||(24879993-24880158)
chr4 (7-173)||(47564238-47564403)
chr4 (7-88)||(11006876-11006958)
chr4 (12-94)||(36379881-36379963)
chr4 (7-49)||(5100603-5100645)
chr4 (11-103)||(3577831-3577925)
chr4 (19-56)||(5100501-5100538)
chr4 (90-173)||(22133069-22133151)
[»] chr6 (24 HSPs)
chr6 (9-182)||(15533322-15533495)
chr6 (7-124)||(30729446-30729563)
chr6 (11-122)||(3395694-3395805)
chr6 (11-122)||(3630710-3630821)
chr6 (19-112)||(26066910-26067003)
chr6 (19-112)||(33310562-33310655)
chr6 (18-122)||(26944714-26944818)
chr6 (18-112)||(15533427-15533522)
chr6 (7-88)||(3395919-3396000)
chr6 (7-88)||(3630516-3630597)
chr6 (96-182)||(26066891-26066976)
chr6 (7-88)||(33310777-33310859)
chr6 (7-124)||(26066706-26066824)
chr6 (96-173)||(3395740-3395816)
chr6 (25-146)||(28038372-28038494)
chr6 (113-181)||(30729456-30729523)
chr6 (90-181)||(3630503-3630593)
chr6 (96-182)||(33310589-33310674)
chr6 (19-149)||(11137760-11137892)
chr6 (96-173)||(3630699-3630775)
chr6 (115-173)||(33310789-33310846)
chr6 (109-173)||(3395931-3395994)
chr6 (113-181)||(26944752-26944819)
chr6 (11-104)||(28038455-28038544)
[»] scaffold1674 (2 HSPs)
scaffold1674 (7-173)||(189-357)
scaffold1674 (13-122)||(293-403)
[»] scaffold0025 (3 HSPs)
scaffold0025 (18-173)||(69941-70097)
scaffold0025 (13-122)||(70033-70143)
scaffold0025 (114-181)||(69941-70008)
[»] scaffold0005 (2 HSPs)
scaffold0005 (12-122)||(51400-51510)
scaffold0005 (7-181)||(51438-51611)
[»] scaffold0133 (2 HSPs)
scaffold0133 (24-179)||(4211-4365)
scaffold0133 (24-100)||(4193-4269)
[»] scaffold0011 (1 HSPs)
scaffold0011 (12-122)||(35277-35387)
[»] scaffold0140 (3 HSPs)
scaffold0140 (19-112)||(23797-23890)
scaffold0140 (7-88)||(24013-24095)
scaffold0140 (115-173)||(24025-24082)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 6e-82; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 6e-82
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 31466598 - 31466771
Alignment:
Q  9 tttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcatt 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  31466598 tttacaccctaaccccttcagccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaggtagttccacaagcatt 31466697  T
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  31466698 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactaggag 31466771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 659613 - 659438
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  659613 agtttacaccttaaccccttcaaccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagca 659514  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  659513 ttcaccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactaggag 659438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 6746936 - 6746781
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| |||| ||||||||||||||| |||||    
T  6746936 taaccccttcagccctcagaatgtcttccgccttctcgaaggtccttacagtccaactacgctaggaattttaggtagttccacaagcattcactttaac 6746837  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6746836 ctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 6746781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 20044560 - 20044393
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||||||||    
T  20044560 acaccttaaccccttcagccatcggaatgacttccgccttctcgaaggtccttgcagtccaactacaccaggaattttaggtagttccacaagcattcac 20044461  T
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactag 179  Q
     |||||||||| |||||||  || |||||||| ||||||||||||||||||||||||||||| |||||    
T  20044460 tttaacctcttcagccatcaaaatgtcttccgccttctcgaagagtccttgcagtccaactacactag 20044393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 18468587 - 18468423
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| ||| ||||| ||||| ||||  |||||||||||||| |||||    
T  18468587 taaccccttcagccctcggaatgtcttccgccttctcaaaggtccttgtagtccaacaacactaggagttttaggtagtcccacaagcattcactttaac 18468488  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  18468487 ctcttcagccatcggaacatcttccgtcttctcgaagagtccttgcagtccaactacactaggag 18468423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 41586794 - 41586904
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  41586794 acaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcattcac 41586893  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  41586894 cataacatctt 41586904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 9e-38
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 27911925 - 27911814
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||||||||||    
T  27911925 tacaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtctaactacactaggaattttaggtagttccacaagcattca 27911826  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  27911825 ccataacatctt 27911814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 20504654 - 20504763
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    |||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  20504654 caccttaacctcttcagccatcagaatgtcttcctccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcattcacc 20504753  T
Q  113 ttaacctctt 122  Q
     |||||||||    
T  20504754 ataacctctt 20504763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 18510208 - 18510311
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||| |||| |||||||||||||||| ||||     
T  18510208 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtctaactacgctaggtattttaggtagttccacaagcattcaccataaca 18510307  T
Q  119 tctt 122  Q
    ||||    
T  18510308 tctt 18510311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 8e-32
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 15355365 - 15355458
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  15355365 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 15355458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 8e-32
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 23666809 - 23666716
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  23666809 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 23666716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 10756660 - 10756567
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  10756660 aaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 10756567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 31544500 - 31544397
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||| ||||     
T  31544500 aaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataaca 31544401  T
Q  119 tctt 122  Q
    ||||    
T  31544400 tctt 31544397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 20044458 - 20044353
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaa 116  Q
    ||||| |||||||||||  |||||||||||||||||||||| |||||||||||||||||||| ||| | ||||| |||| |||||||||||||||| |||    
T  20044458 taacctcttcagccatcaaaatgtcttccgccttctcgaagagtccttgcagtccaactacactagaagttttaggtagttccacaagcattcaccataa 20044359  T
Q  117 cctctt 122  Q
    | ||||    
T  20044358 catctt 20044353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 31544703 - 31544622
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  31544703 agtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 31544622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 659511 - 659401
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||| ||||| ||||| |||| ||||||| |||||||    
T  659511 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactaggagttttaggtagttccacaaacattcac 659412  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  659411 cataacatctt 659401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 18468491 - 18468386
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaa 116  Q
    ||||| |||||||||||||||  ||||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| |||    
T  18468491 taacctcttcagccatcggaacatcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa 18468392  T
Q  117 cctctt 122  Q
    | ||||    
T  18468391 catctt 18468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 6746840 - 6746745
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||  ||||| ||||| ||||  |||||||||||||||    
T  6746840 taacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacgctaggatttttaggtagtcccacaagcattcacc 6746745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 10756865 - 10756783
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  10756865 agtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 10756783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 34477727 - 34477809
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  34477727 agtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 34477809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 34477931 - 34478035
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||| ||||||| ||| |||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||| ||||    
T  34477931 aaccacttcagctatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataac 34478030  T
Q  118 ctctt 122  Q
     ||||    
T  34478031 atctt 34478035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 15355160 - 15355242
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||| | |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  15355160 agtttacaccatcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 15355242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 23667014 - 23666932
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||| | |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  23667014 agtttacaccatcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 23666932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 41586601 - 41586682
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||| |||| | |||| |||||||||||  |||||||||    
T  41586601 agtttacaccctaacctcttcaaccatcggaatgccttccgccttcttgaagatgcttgtagtccaactacgctaggaattt 41586682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 31466698 - 31466798
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||| ||||||||||| |||||||| |||||||||| ||||||| |||||||||||| |||||   ||| |||| |||||||||||||||    
T  31466698 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactaggagaattatgtagttccacaagcattcac 31466797  T
Q  112 c 112  Q
    |    
T  31466798 c 31466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 20504552 - 20504725
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||   | |||| | ||||  ||| || ||||   |||||||||  || | ||||||||     
T  20504552 agtttacaccctaacctcttcaaccatcggaatgccttccgcccatttgaagattcttgt-gtctaaactactcaaggaattttgggttgttccacaagt 20504650  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |  |||||||||||||| ||||||| ||| |||||||  |||||||||| |||||||||||||||||| |||||||    
T  20504651 acgcaccttaacctcttcagccatcagaatgtcttcctccttctcgaag-gtccttgcagtccaactacactagga 20504725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 10756679 - 10756594
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||||||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  10756679 atccacaagtatacacctcaaccacttcagccatcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 10756594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 15355346 - 15355431
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  15355346 atccacaagtatacacctcaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 15355431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 23666828 - 23666743
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  23666828 atccacaagtatacacctcaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 23666743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 27912108 - 27912038
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||| |||| ||||||  |||||||||    
T  27912108 taacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtcaaactacgctaggaattt 27912038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 34477912 - 34477998
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| ||| ||| |||  ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  34477912 atccacaagtatacacctcaaccacttcagctatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggag 34477998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 27911936 - 27911852
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||||||| || |||||||||| ||| |||| |||||| |||||||| |||||||||| |||||||||||| ||||| |||||||    
T  27911936 atccacaagtatacaccttaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtctaactacactagga 27911852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 41586782 - 41586866
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||||||| |  |||||||||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  41586782 atccacaagtacacaccttaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactagga 41586866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 182
Target Start/End: Complemental strand, 31544515 - 31544434
Alignment:
Q  100 acaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| || ||||| |||| ||| |||||||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  31544515 acaagtatacacctcaaccacttcagccatcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 31544434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 31544716 - 31544634
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  31544716 aagtagctccacaagtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 31544634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 18510188 - 18510265
Alignment:
Q  96 atccacaagcattcaccttaa-cctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||| || |||||||| || ||| ||||||||||| |||||||| |||||||||| |||||||||||| |||||    
T  18510188 atccacaagtatacaccttaaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtctaacta 18510265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 18510005 - 18510086
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||| ||||| ||||| ||||||||||| |||||||| | | |||| | |||| |||||||||||  |||||||||    
T  18510005 agtttacaccttaacctcttcaaccatcggaatgccttccgcccttttgaagatgcttgtagtccaactacgctaggaattt 18510086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 27912110 - 27912067
Alignment:
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||    
T  27912110 cttaacctcttcagccatcggaatgtcttccgccttctcgaaga 27912067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 10756852 - 10756795
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  10756852 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 10756795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 15355173 - 15355230
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  15355173 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 15355230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 23667001 - 23666944
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  23667001 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 23666944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 34477740 - 34477797
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  34477740 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 34477797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 4e-77; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 21519045 - 21519218
Alignment:
Q  9 tttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcatt 108  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  21519045 tttacaccttaaccccttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcatt 21519144  T
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  21519145 caccttaacctctttagccatcggaacgtcttctgtcttctcgaagagtccttgcagtccaactacactaggag 21519218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 22405141 - 22405251
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| ||||||||||| |||| |||||||||||||||    
T  22405141 acaccttaacctcttcagccatcggaatggcttccgccttctcgaagatccttgaagtccaactacactaggaattttaggtagttccacaagcattcac 22405240  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  22405241 cataacatctt 22405251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 35216482 - 35216585
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||  ||||||||||||||| ||||     
T  35216482 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagtttcaggtagtcccacaagcattcaccataaca 35216581  T
Q  119 tctt 122  Q
    ||||    
T  35216582 tctt 35216585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 36559657 - 36559750
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  36559657 aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 36559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 19502848 - 19502951
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| ||||     
T  19502848 aaccccttcagccctcggaatgtcttccgccttcttgaaggttcttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataaca 19502947  T
Q  119 tctt 122  Q
    ||||    
T  19502948 tctt 19502951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 19502645 - 19502715
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactac 77  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  19502645 agtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactac 19502715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 21519145 - 21519255
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||| ||||||||||| |||||| | |||||||||| |||||||||||||||||||| ||||| ||||| |||| |||||||||||||||    
T  21519145 caccttaacctctttagccatcggaacgtcttctgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcac 21519244  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  21519245 cataacatctt 21519255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 36559453 - 36559535
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||||    
T  36559453 agtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacactaggaattt 36559535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 6259745 - 6259808
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaacta 76  Q
    |||| |||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  6259745 caccttaaccccttcagccctcggaatatcttccaccttctcgaaggtccttgcagtccaacta 6259808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 6259454 - 6259602
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| ||||||||||| |||| ||| | | |||| ||||||  |||||| ||||   |||||||||| |||| ||||||||     
T  6259454 agtttacaccctaacctcttcaaccatcggaatgccttctgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttccacaagt 6259552  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
       |||||||||||||| ||||||| ||| |||||||| |||||||||||    
T  6259553 gcacaccttaacctcttcagccatcagaatgtcttccgccttctcgaaga 6259602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 31733685 - 31733761
Alignment:
Q  28 agccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||| ||||| | |||| ||||||||    
T  31733685 agccatcggaatgtcttcctccttctcaaaggtccttgcagtccaactacgctagaaatttgaggtagttccacaag 31733761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 35216278 - 35216360
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||  ||||||||||| ||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  35216278 agtttacaccctcaacttcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 35216360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 35216463 - 35216548
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  35216463 atccacaagtatacacctcaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 35216548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 6259555 - 6259631
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||| |  | ||||||| |||||||||    
T  6259555 acaccttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtatccaaactacactaggaattt 6259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 22405142 - 22405213
Alignment:
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||||||||||| ||||||||||| | |||||| ||||||||||| |||||| |||||||||| |||||||    
T  22405142 caccttaacctcttcagccatcggaatggcttccgccttctcgaaga-tccttgaagtccaactacactagga 22405213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 36559638 - 36559723
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| ||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  36559638 atccacaagtatacacctcaaccccttcagccctcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 36559723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 13828954 - 13829050
Alignment:
Q  25 ttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctctt 122  Q
    |||| ||||| |||||||||||||||||| |||| | |||||| |||||||||| ||| |||||||  ||| |||||||| || |||| |||||||||    
T  13828954 ttcaaccatcagaatgtcttccgccttcttgaagattcttgca-tccaactacactagaaattttagttagttccacaagtatacaccataacctctt 13829050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 19502632 - 19502723
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||| ||||||||  | |||| ||||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||  |||||||    
T  19502632 aagtagctccacaagtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggag 19502723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 19502829 - 19502914
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| |||||| |||||||| ||||| |||| || ||||||||||||||| ||||||||    
T  19502829 atccacaagtatacacctcaaccccttcagccctcggaatgtcttccgccttcttgaag-gttcttgcagtccaactacactaggag 19502914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 31733480 - 31733526
Alignment:
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||    
T  31733480 caccttaacctctttagccatcggaatgtcttctgccttctcgaaga 31733526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 36559466 - 36559531
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| |||||||||| |||||||    
T  36559466 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaactacactagga 36559531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 31733673 - 31733733
Alignment:
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| |||||||||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  31733673 cttaacttctttagccatcggaatgtcttcctccttctcaaag-gtccttgcagtccaacta 31733733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 31733479 - 31733555
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||||  ||||| |  | ||||||| |||||||||    
T  31733479 acaccttaacctctttagccatcggaatgtcttctgccttctcgaagaaccttgtatccaaactacactaggaattt 31733555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 6259732 - 6259809
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactat 174  Q
    ||||||||| |  |||||||||| ||| |||| ||||||  ||||||  |||||||||| |||||||||||||||||||    
T  6259732 atccacaagtacgcaccttaaccccttcagccctcggaatatcttccaccttctcgaag-gtccttgcagtccaactat 6259809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 6e-76; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 14098610 - 14098785
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| ||    
T  14098610 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttctacaaaca 14098709  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  14098710 ttcaccttaacctttttagccatcggaacgtcttccgttttctcgaagagtccttgcagtccaactacactaggag 14098785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 31736226 - 31736390
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  ||||||||||||||||||||    
T  31736226 taaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacgttaggaattttaggtagtcccacaagcattcaccttaac 31736325  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31736326 ctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 31736390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 25127389 - 25127225
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    ||||||||| | |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  25127389 taacccctttaaccattggaatgtcttccgccttctcgaaggtctttgcagtccaactacactaggaattttaggtagttccacaagcattcaccttaac 25127290  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  25127289 ctcttcagccatcggaacgtcttccgccttcttgaagagtccttgcagtccaactacactaggag 25127225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 6997019 - 6996909
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||    
T  6997019 acaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcatttac 6996920  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  6996919 cataacatctt 6996909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 28202148 - 28202253
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  28202148 acaccttaaccccttcagcccacggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcattcac 28202247  T
Q  112 cttaac 117  Q
    | ||||    
T  28202248 cataac 28202253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 8e-35
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 16430439 - 16430329
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||  ||||||||||| |||| |||||||||||||||    
T  16430439 acaccttaaccccttcagccatcagaatgtgttccgccttctcgaaggtccttgcagtctaactacgctaggaattttaggtagttccacaagcattcac 16430340  T
Q  112 cttaacctctt 122  Q
    | |||||||||    
T  16430339 cataacctctt 16430329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 8e-35
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 31423823 - 31423933
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||| |||| |||||||||||||||    
T  31423823 acaccataaccccttcagccctcggaatgtcttccgccttctcgaaggtccttacagtccaactacactagaaattttaggtagttccacaagcattcac 31423922  T
Q  112 cttaacctctt 122  Q
    | ||| |||||    
T  31423923 cataatctctt 31423933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 28842123 - 28842021
Alignment:
Q  20 accccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacct 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| | |||| |||| |    
T  28842123 accccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcgtacaccataacat 28842024  T
Q  120 ctt 122  Q
    |||    
T  28842023 ctt 28842021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 50077587 - 50077691
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||| |||||||||||||||| ||||    
T  50077587 taaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcaatccaactacgctaggaattttaggtagttccacaagcattcaccataac 50077686  T
Q  118 ctctt 122  Q
     ||||    
T  50077687 atctt 50077691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 20301906 - 20301795
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||  |||  |||||||||||||    
T  20301906 tacaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagcccaactacgctaggaattttagttagtcccacaagcattca 20301807  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  20301806 ccataacatctt 20301795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 51751804 - 51751701
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| | |||| || ||||||||||||| ||||     
T  51751804 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgtagtccaactacgctaggaatttcaggtagttctacaagcattcaccataaca 51751705  T
Q  119 tctt 122  Q
    ||||    
T  51751704 tctt 51751701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 8e-29
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 27337641 - 27337745
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  | ||||||||||||| ||||    
T  27337641 taacctcttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcctacaagcattcaccataac 27337740  T
Q  118 ctctt 122  Q
     ||||    
T  27337741 atctt 27337745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 47179129 - 47179026
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||| ||||     
T  47179129 aaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataaca 47179030  T
Q  119 tctt 122  Q
    ||||    
T  47179029 tctt 47179026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 25249440 - 25249549
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    |||| ||| |||||||||| |||||||||||| | |||||||||||||| |||||||||||||||  ||||||||||| |||| ||||||||||||||||    
T  25249440 caccttaaacccttcagccctcggaatgtctttcaccttctcgaaggtcgttgcagtccaactacgctaggaattttaggtagttccacaagcattcacc 25249539  T
Q  113 ttaacctctt 122  Q
     |||| ||||    
T  25249540 ataacatctt 25249549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 50077290 - 50077455
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| |||||| |||| |||||||| | | |||| ||||||  |||||| ||||   |||||||||| |||| ||||||||     
T  50077290 agtttacaccctaacctcttcaaccatcgaaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttccacaagt 50077388  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
       ||||||||||||||||||||||| || |||||||||||||||||||| |||||| ||||||||||    
T  50077389 gcacaccttaacctctttagccatcgaaatgtcttccgtcttctcgaaga-tccttgtagtccaacta 50077455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 25127298 - 25127188
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||| ||||| ||||| |||| ||||||| |||||||    
T  25127298 caccttaacctcttcagccatcggaacgtcttccgccttcttgaagagtccttgcagtccaactacactaggagttttaggtagttccacaatcattcac 25127199  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  25127198 cataacatctt 25127188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 31736317 - 31736427
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||    
T  31736317 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcac 31736416  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  31736417 cataacatctt 31736427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 16227936 - 16227831
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaa 116  Q
    ||||| ||||||||||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| ||||| ||||  ||||||||||||||| |||    
T  16227936 taaccacttcagccatcagaatatcttccgccttctcgaagagtccttgtagtccaactacactaggagttttaggtagtcccacaagcattcaccataa 16227837  T
Q  117 cctctt 122  Q
    | ||||    
T  16227836 catctt 16227831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 13126193 - 13126303
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| ||||| ||||||||||| |||||||||||||||| |||||| |||||||| |||||||||| || |||||||| |||| ||||||||  | ||    
T  13126193 tacaccttaacctcttcagccatcagaatgtcttccgccttgtcgaagatccttgca-tccaactacactaagaattttaggtagttccacaagtctaca 13126291  T
Q  111 ccttaacctctt 122  Q
    || |||||||||    
T  13126292 ccataacctctt 13126303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 14098727 - 14098822
Alignment:
Q  28 agccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctctt 122  Q
    ||||||||||| ||||||||  ||||||||| |||||||||||||||||||| ||||| ||||| |||| |||||||||||||||| |||| ||||    
T  14098727 agccatcggaacgtcttccgttttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccataacatctt 14098822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 20302090 - 20302020
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||  |||||||||    
T  20302090 taacctcttcagccatcggaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaattt 20302020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 31423634 - 31423726
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    ||||| ||||| ||||||||||||||||||||||| | ||||||||| |||||| |||||||||||  ||||||||||| |||| || |||||    
T  31423634 acaccttaacctcttcagccatcggaatgtcttccacattctcgaagatccttgtagtccaactacgctaggaattttaggtagttctacaag 31423726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 31423533 - 31423698
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||| ||||| ||| | |||||||||||||||||||| | | |||| || |||  |||||| ||||   |||||||||| |||| ||||||||     
T  31423533 agtttacaccttaacctctttaaccatcggaatgtcttccgcccttttgaagatctttgt-gtccaaactactcaaggaattttaggtagttccacaagt 31423631  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |  |||||||||||||| ||||||||||| |||||||   |||||||||| |||||| ||||||||||    
T  31423632 acacaccttaacctcttcagccatcggaatgtcttccacattctcgaaga-tccttgtagtccaacta 31423698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 51751996 - 51751937
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactac 77  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  51751996 taaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgtagtccaactac 51751937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 16228141 - 16228059
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||||| | |||| |||||||||||  |||||||||    
T  16228141 agtttacaccctcaacctcttcagccatcggaatttcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 16228059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 47179333 - 47179251
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  47179333 agtttacaccctcaacttcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 47179251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 25249149 - 25249297
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| |||||  |||| ||||| |||||||| | | |||| ||||||  |||||| ||||   |||||||||| |||| |||||||      
T  25249149 agtttacaccctaacctcttcaatcatcagaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttccacaatt 25249247  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
    |  |||||||||||||| ||||||||||| |||||||||||||| |||||    
T  25249248 acacaccttaacctcttcagccatcggaatgtcttccgtcttcttgaaga 25249297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 28202050 - 28202220
Alignment:
Q  10 ttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagcatt 108  Q
    ||||||||||||| ||||| ||||| ||||| |||||||| | | |||| ||||||  |||||| ||||   ||| |||||| |||| ||||||||        
T  28202050 ttacaccctaacctcttcaaccatcagaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggcattttaggtagttccacaagtgca 28202148  T
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||||||| ||| ||||  ||||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  28202149 caccttaaccccttcagcccacggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactagga 28202220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 50077391 - 50077483
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    ||||| ||||| ||| |||||||| ||||||||||| |||||||||| |||||| |||||||||||  ||||||||||| |||| || |||||    
T  50077391 acaccttaacctctttagccatcgaaatgtcttccgtcttctcgaagatccttgtagtccaactacgctaggaattttaggtagttctacaag 50077483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 14098597 - 14098687
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||| ||||||||  | |||| ||||| ||| ||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  14098597 aagtagctccacaagtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactagga 14098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 6997116 - 6996947
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||    ||||||||||| |||||||| | | |||| ||||||  |||||| ||||   ||| |||||| |||| ||||||||     
T  6997116 agtttacaccctaacctct----ccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggcattttaggtagttccacaagt 6997022  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
       |||||||||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  6997021 gcacaccttaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactagga 6996947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 27337639 - 27337708
Alignment:
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  27337639 cttaacctcttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 27337708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 47179148 - 47179063
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||||||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  47179148 atccacaagtatacacctcaaccacttcagccatcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 47179063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 13126129 - 13126262
Alignment:
Q  42 cttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttc 141  Q
    ||||| |||||| |||| |||||||| | |||||||  ||||||||||| |||| ||| ||||  | |||||||||||||| ||||||| ||| ||||||    
T  13126129 cttccaccttcttgaagatccttgca-tgcaactacgctaggaattttaggtagttccgcaagtctacaccttaacctcttcagccatcagaatgtcttc 13126227  T
Q  142 cgtcttctcgaagagtccttgcagtccaactatacta 178  Q
    || ||| ||||||| |||||||| |||||||| ||||    
T  13126228 cgccttgtcgaaga-tccttgca-tccaactacacta 13126262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 16430657 - 16430582
Alignment:
Q  80 taggaattttaagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
    ||||||||||| |||| |||||||| |  |||||||||||||| ||||||| ||| |||||||| |||||||||||    
T  16430657 taggaattttaggtagctccacaagtacacaccttaacctcttcagccatcagaatgtcttccgccttctcgaaga 16430582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 16227956 - 16227868
Alignment:
Q  96 atccacaagcattcacct--taacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || |||||  ||||| ||| ||||||| |||  ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  16227956 atccacaagtatacacctcataaccacttcagccatcagaatatcttccgccttctcgaagagtccttgtagtccaactacactaggag 16227868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 16430629 - 16430576
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttg 65  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  16430629 acaccttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttg 16430576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 20302092 - 20302032
Alignment:
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||| |||||| ||||||||||    
T  20302092 cttaacctcttcagccatcggaatgtcttccgccttctcgaaga-tccttgtagtccaacta 20302032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 25249250 - 25249326
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| |||| |||||| |  | ||||||| |||||||||    
T  25249250 acaccttaacctcttcagccatcggaatgtcttccgtcttcttgaagatccttgtatccaaactacactaggaattt 25249326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 10742308 - 10742240
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||| ||||| ||||||||||| ||| |||||||| |||| |||||||| |||||||||| |||||||||    
T  10742308 aacctcttcaaccatcggaatgcctttcgccttcttgaagatccttgca-tccaactacactaggaattt 10742240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 28842115 - 28842059
Alignment:
Q  124 agccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||| |||||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  28842115 agccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactagga 28842059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 51751823 - 51751747
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||| ||| || ||||| |||| ||| ||||||||||| |||||||| |||||||||| ||||||| ||||||||||    
T  51751823 atccataagtatacacctcaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgtagtccaacta 51751747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 155318 - 155220
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    |||| ||||| ||||||||||| |||| ||||||| | || |  ||||| |||||||||| ||||||||||| |||| ||||||||  | ||||||||||    
T  155318 aacctcttcaaccatcggaatgccttctgccttcttggagattattgca-tccaactacactaggaattttaggtagttccacaagtgtacaccttaacc 155220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 31423811 - 31423893
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactag 179  Q
    ||||||||| |  |||| ||||| ||| |||| |||||| |||||||| |||||||||| |||||| ||||||||||| |||||    
T  31423811 atccacaagtacacaccataaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttacagtccaactacactag 31423893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 8954263 - 8954147
Alignment:
Q  24 cttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctcttt 123  Q
    ||||| |||| |||||| |||||||||| | |||| | |||||  |||||||||| |||||| |||| |||| |||||||| |  ||||||||||||||     
T  8954263 cttcaaccattggaatgccttccgcctttt-gaagattcttgct-tccaactacactaggaaatttaggtagctccacaagtacacaccttaacctcttc 8954166  T
Q  124 agccatcggaacgtcttcc 142  Q
    || ||||| || |||||||    
T  8954165 agtcatcgaaatgtcttcc 8954147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 31423520 - 31423573
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccg 143  Q
    |||||| ||||||||  | |||||||||||||||| ||||||||| ||||||||    
T  31423520 aagtagctccacaagtttacaccttaacctctttaaccatcggaatgtcttccg 31423573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 8954181 - 8954105
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||| ||||| |||||| ||||| |||||||||| ||||||| ||  |||||| |  | |||||||||||||||||    
T  8954181 acaccttaacctcttcagtcatcgaaatgtcttccaccttctcaaaaatccttgtatccaaactacaataggaattt 8954105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 2e-75; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 20298956 - 20298786
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  20298956 acaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcattcac 20298857  T
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20298856 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 20298786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 21679662 - 21679488
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||    
T  21679662 agtttacaccctaaccccttcagccatcggattgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaagca 21679563  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  21679562 ttcaccttaacctcttctgccatcggaacgtctcccgccttctcgaagagtccttgcagtccaactacactagga 21679488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 7470734 - 7470894
Alignment:
Q  21 ccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctc 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  7470734 ccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacattaggaattttaggtagtaccacaagcattcaccttaacctc 7470833  T
Q  121 tttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    || ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  7470834 ttcagccatcggaacgtcttccgtcttctcgaagagtccttgcacttcaactatgctagga 7470894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 38395874 - 38395710
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||||||||    
T  38395874 taaccctttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccttaac 38395775  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  38395774 ctcttcagccatcggaacgtcttctctcttctcgaagagtccttgcagtccaactacactaggag 38395710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 7092875 - 7093038
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  7092875 taaccccttcagctctcagaatgtcttccgccttctcgaaggtccttgtagtccaactacgctaggaattttaggtagttccacaagcattcaccttaac 7092974  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  7092975 ctcttcagccatcggaacgtcttcggtcttctcgaagagtccttgcagtccaactacactagga 7093038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 13 - 182
Target Start/End: Complemental strand, 20298859 - 20298689
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||    
T  20298859 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcac 20298760  T
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20298759 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 20298689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 28487137 - 28486974
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||||||||||    
T  28487137 aaccccttcagccatcggaatattttccgccttctcgaaggtccttgtagtccaactacgctaggaattttaggtagttccacaagcattcaccttaacc 28487038  T
Q  119 tctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| || |||||    
T  28487037 tcttcagccatcggaacgtcttccgtcttctctaagagtccttgcggtccaactacaccaggag 28486974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 44726421 - 44726311
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  44726421 acaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtcattgcagtccaactacactaggaattttaggtagttccacaagcattcac 44726322  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  44726321 cataacatctt 44726311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 44015 - 43912
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| ||||     
T  44015 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataaca 43916  T
Q  119 tctt 122  Q
    ||||    
T  43915 tctt 43912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 1047801 - 1047904
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| ||||     
T  1047801 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataaca 1047900  T
Q  119 tctt 122  Q
    ||||    
T  1047901 tctt 1047904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 22136579 - 22136486
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  22136579 aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 22136486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 40551606 - 40551513
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  40551606 aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 40551513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 20298762 - 20298652
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||    
T  20298762 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcac 20298663  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  20298662 cataacatctt 20298652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 21679560 - 21679450
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| |||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||| || ||||||||||||    
T  21679560 caccttaacctcttctgccatcggaacgtctcccgccttctcgaagagtccttgcagtccaactacactaggaattttatgtagttcgacaagcattcac 21679461  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  21679460 cataacatctt 21679450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 1047598 - 1047679
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  1047598 agtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 1047679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 7350168 - 7350268
Alignment:
Q  22 cccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctct 121  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||||  |||||||| |||||| |||| |||    
T  7350168 cccttcagcccttggaatgtcttccgccttctcgaaggtccttgcagtccaactacactagaagttttaggtagtcccacaagctttcaccataacatct 7350267  T
Q  122 t 122  Q
    |    
T  7350268 t 7350268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 9680447 - 9680274
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||||||||||||||| |||||||| | | |||| ||||||  |||||| ||||   |||||||||| |||| || |||||     
T  9680447 agtttacaccctaacctcttcagccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttctacaagt 9680349  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |   ||||||||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||| ||| ||||||    
T  9680348 acataccttaacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaattatgctagga 9680274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 24815819 - 24815917
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||| ||||||||||| |||| || ||||| ||||||    
T  24815819 acaccttaacctcttcagccatcggaatgtattccgccttctcgaaggtccttgca-cccaactacactaggaattttaggtagttctacaagtattcac 24815917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 7092966 - 7093076
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||| | |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||    
T  7092966 caccttaacctcttcagccatcggaacgtcttcggtcttctcgaagagtccttgcagtccaactacactaggatttttaggtagtcccacaagcattcac 7093065  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  7093066 cataacatctt 7093076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 7349961 - 7350059
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  ||||||||||| |||| || |||||    
T  7349961 agtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattttaggtagttctacaag 7350059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 9680158 - 9680052
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||| ||| ||| |||||||||| |||||||||||||||||||||||  |||||  ||| ||||||| |||| ||||||||||||||    
T  9680158 tacaccttaaccccttcggccctcgtaatgtcttccaccttctcgaaggtccttgcagtcagactacgctagaaattttaggtagttccacaagcattca 9680059  T
Q  111 ccttaac 117  Q
    || ||||    
T  9680058 ccataac 9680052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 31156594 - 31156675
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  31156594 agtttacaccctaacctcttcagtcatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 31156675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 31156797 - 31156901
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    ||||||||||||||||||||| ||||||||  |||||||| |||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||| ||||    
T  31156797 aaccccttcagccatcggaatatcttccgcactctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataac 31156896  T
Q  118 ctctt 122  Q
     ||||    
T  31156897 atctt 31156901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 22136783 - 22136701
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  22136783 agtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 22136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 40551810 - 40551728
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  40551810 agtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 40551728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 7e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 44219 - 44138
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||||| | |||| |||||||||||  |||||||||    
T  44219 agtttacaccctaacctctttagccatcggaatgtctaccgccttctcgaagatgcttgtagtccaactacgctaggaattt 44138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 38395783 - 38395683
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| ||||||   |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||    
T  38395783 caccttaacctcttcagccatcggaacgtcttctctcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcac 38395684  T
Q  112 c 112  Q
    |    
T  38395683 c 38395683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 7470822 - 7470932
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| ||||||||| | ||||||   ||||||||||| ||||  ||||||||||||||    
T  7470822 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcacttcaactatgctaggaattttaggtagtcccacaagcattcac 7470921  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  7470922 cataacatctt 7470932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 24815780 - 24815890
Alignment:
Q  69 tccaactacaataggaattttaagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtcc 168  Q
    |||||||||  ||||||||||| |||| |||||||| |  |||||||||||||| ||||||||||| || ||||| |||||||||| |||||||||  ||    
T  24815780 tccaactacgctaggaattttaggtagctccacaagtacacaccttaacctcttcagccatcggaatgtattccgccttctcgaag-gtccttgca-ccc 24815877  T
Q  169 aactatactagga 181  Q
    ||||| |||||||    
T  24815878 aactacactagga 24815890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 28487047 - 28486947
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||||  |||| ||||| ||||  ||||||||||||||    
T  28487047 caccttaacctcttcagccatcggaacgtcttccgtcttctctaagagtccttgcggtccaactacaccaggagttttaggtagtcccacaagcattcac 28486948  T
Q  112 c 112  Q
    |    
T  28486947 c 28486947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 44034 - 43949
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  44034 atccacaagtatacacctcaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 43949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 1047782 - 1047867
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  1047782 atccacaagtatacacctcaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 1047867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 31156778 - 31156864
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||||||||||  |||||||   ||||||||||||||||||||||||||| ||||||||    
T  31156778 atccacaagtatacacctcaaccccttcagccatcggaatatcttccgcactctcgaagagtccttgcagtccaactacactaggag 31156864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 22136598 - 22136513
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| ||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  22136598 atccacaagtatacacctcaaccccttcagccctcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 22136513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 40551625 - 40551540
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| ||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  40551625 atccacaagtatacacctcaaccccttcagccctcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 40551540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 4509664 - 4509752
Alignment:
Q  33 tcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctctt 122  Q
    |||||||| |||||||||||| |||| |||||||| |||||||||| ||||| |||||  ||| ||||||||| | |||| |||||||||    
T  4509664 tcggaatgccttccgccttcttgaagttccttgca-tccaactacactaggatttttagatagttccacaagcctacaccataacctctt 4509752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 4511506 - 4511594
Alignment:
Q  33 tcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctctt 122  Q
    |||||||| |||||||||||| |||| |||||||| |||||||||| ||||| |||||  ||| ||||||||| | |||| |||||||||    
T  4511506 tcggaatgccttccgccttcttgaagttccttgca-tccaactacactaggatttttagatagttccacaagcctacaccataacctctt 4511594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 44726420 - 44726349
Alignment:
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||||||| ||| |||| |||||| |||||||| |||||||||| ||| |||||||||||||| |||||||    
T  44726420 caccttaaccccttcagccctcggaatgtcttccgccttctcgaag-gtcattgcagtccaactacactagga 44726349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 44232 - 44150
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||||||||||||||| |||| ||| ||||||||||| | |||| ||||||||||    
T  44232 aagtagctccacaagtttacaccctaacctctttagccatcggaatgtctaccgccttctcgaaga-tgcttgtagtccaacta 44150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 1047585 - 1047667
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  1047585 aagtagctccacaagtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 1047667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 7350146 - 7350228
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactag 179  Q
    ||||||||| || ||||| || | ||| |||| | |||| |||||||| |||||||||| |||||||||||||||||| |||||    
T  7350146 atccacaagtatacacctcaatcccttcagcccttggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactag 7350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 31156581 - 31156663
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||| || |||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  31156581 aagtagctccacaagtttacaccctaacctcttcagtcatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 31156663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 7349974 - 7350031
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  7349974 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 7350031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 22136770 - 22136713
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  22136770 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 22136713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 40551797 - 40551740
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  40551797 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 40551740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 6067823 - 6067896
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaag---gtccttgcagtccaactacaataggaatttta 90  Q
    |||| ||||| |||||||||||||||||||||||| ||||    |||||||| |||||||||| ||| |||||||    
T  6067823 aacctcttcaaccatcggaatgtcttccgccttcttgaagaccatccttgca-tccaactacactagaaatttta 6067896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 1e-73; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 1e-73
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 15072406 - 15072231
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  15072406 agtttacactctaaccccttcagccatcggaatatcttccgtcttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagca 15072307  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15072306 ttcaccttaacctcttcagccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 15072231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 8e-29
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 27828792 - 27828688
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||  ||||||||||| ||| ||||    
T  27828792 taaccccttcagccctcggaatgtcttctgccttctcgaaggtccttgtagtccaactacactaggaattttaggtagtcccacaagcatttaccataac 27828693  T
Q  118 ctctt 122  Q
     ||||    
T  27828692 atctt 27828688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 43081423 - 43081320
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||| |||||| ||||     
T  43081423 aaccacttcagccatcagaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagacccacaagctttcaccataaca 43081324  T
Q  119 tctt 122  Q
    ||||    
T  43081323 tctt 43081320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 41384192 - 41384089
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||| | || |||||||||||||||||||||||||||||| |||| ||||||  |||| |||||| |||| |||||||||||||||| ||||     
T  41384192 aaccccttcagtcctcagaatgtcttccgccttctcgaaggtccttgaagtctaactacgctaggtattttaggtagttccacaagcattcaccataaca 41384093  T
Q  119 tctt 122  Q
    ||||    
T  41384092 tctt 41384089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 15072304 - 15072194
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| |||| || ||||||||||||    
T  15072304 caccttaacctcttcagccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagttctacaagcattcac 15072205  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  15072204 cataacatctt 15072194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 27828985 - 27828915
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||  |||||||||    
T  27828985 taacctcttcagccatcggaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaattt 27828915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 41384394 - 41384324
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactac 77  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  41384394 agtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaagatgtttgtagtccaactac 41384324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 7e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 18812573 - 18812492
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| |||| | |||| |||||||||||  |||||||||    
T  18812573 agtttacaccctaacctctccagccatcggaatgtcttccgccttcttgaagatgcttgtagtccaactacgctaggaattt 18812492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 17849416 - 17849337
Alignment:
Q  24 cttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    ||||| ||||||||||| |||||||||||| |||| |||||||| |||||||||| ||||||||||| |||| ||||||||    
T  17849416 cttcaaccatcggaatgccttccgccttcttgaagatccttgca-tccaactacactaggaattttaggtagttccacaag 17849337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 43081627 - 43081545
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||  ||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  43081627 agtttacaccctcaacctcttcagtaatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 43081545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 27828987 - 27828927
Alignment:
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||| |||||| ||||||||||    
T  27828987 cttaacctcttcagccatcggaatgtcttccgccttctcgaaga-tccttgtagtccaacta 27828927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 182
Target Start/End: Complemental strand, 43081438 - 43081357
Alignment:
Q  100 acaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| || ||||| |||| ||| ||||||| |||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  43081438 acaagtatacacctcaaccacttcagccatcagaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 43081357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 41384388 - 41384342
Alignment:
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
    |||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  41384388 caccctaacctcttcagccatcggaatgtcttccgccttctcgaaga 41384342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 18812586 - 18812504
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||  ||||||||||| |||||||| ||||| ||||| | |||| ||||||||||    
T  18812586 aagtagctccacaagtttacaccctaacctctccagccatcggaatgtcttccgccttcttgaaga-tgcttgtagtccaacta 18812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 5e-73; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 5e-73
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 43227922 - 43227760
Alignment:
Q  20 accccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacct 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||||    
T  43227922 accccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttagttagttccacaagcattcaccttaacct 43227823  T
Q  120 ctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43227822 ctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 43227760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 8e-69
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 18097517 - 18097692
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    ||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||| |||| ||||||||||    
T  18097517 agtttacacctccaccccttcagccatcggaatgtcttccaccttctcgaaggtccttgcagtccaactaggctaggaattttaggtagttccacaagca 18097616  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18097617 ttcaccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 18097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 5e-67
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 42991842 - 42991678
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  42991842 taaccccttcagccctcgaaatgtcttccgccttctcgaaggtccttgtagtccaactacactaggaattttaggtagttccacatgcattcaccttaac 42991743  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42991742 ctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 42991678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 8e-66
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 28137926 - 28138092
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||| |||| ||||||||||    
T  28137926 agtttacaccttaatcccttcagccatcggaatgtcttcctccttctcaaaggtccttgcagtccaactacactagaaattttaggtagttccacaagca 28138025  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28138026 ttcaccttaacctcttcagccatcggaacgtcttccgtcttctcgaagaatccttgcagtccaacta 28138092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 28100693 - 28100866
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| |||| ||||||||||    
T  28100693 agtttacaccttaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactatgaattttaggtagttccacaagca 28100792  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagg 180  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  28100793 ttcaccttaacctcttcagccattggaacgttttccgtcttctcgaagagtccttacagtccaacgacactagg 28100866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 4308926 - 4309090
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||   ||||||||||||||||||||    
T  4308926 taaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtaatcccacaagcattcaccttaac 4309025  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4309026 ctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 4309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 4e-58
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 35918594 - 35918755
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||||||||    
T  35918594 taacccattcagccctcggaatgtcttccgccttctcgaaagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccttaac 35918693  T
Q  118 ctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactag 179  Q
    ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  35918694 ctcttcaaccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactag 35918755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 11169847 - 11169744
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| ||||     
T  11169847 aacccctttagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataaca 11169748  T
Q  119 tctt 122  Q
    ||||    
T  11169747 tctt 11169744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 890702 - 890805
Alignment:
Q  21 ccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctc 120  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||  ||||||||||| |||| |||||||||||||||| |||| ||    
T  890702 ccccttcagccatcggaatgtcttccgccttctcgaagatccttgcagtcagactacgctaggaattttaggtagttccacaagcattcaccataacatc 890801  T
Q  121 ttta 124  Q
    ||||    
T  890802 ttta 890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 53916460 - 53916571
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||  |||| |||||| |||| |||||||||||| |    
T  53916460 tacaccttaaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcagtctaactacgctaggtattttaggtagttccacaagcattaa 53916559  T
Q  111 ccttaacctctt 122  Q
    || |||||||||    
T  53916560 ccataacctctt 53916571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3316141 - 3316043
Alignment:
Q  24 cttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctctt 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  || |||||||| |||| |||||||||||||||| |||| ||||    
T  3316141 cttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaagaattttaggtagttccacaagcattcaccataacatctt 3316043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 5899157 - 5899056
Alignment:
Q  21 ccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctc 120  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||  ||||||||||||||| |||| ||    
T  5899157 ccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagtcccacaagcattcaccataacatc 5899058  T
Q  121 tt 122  Q
    ||    
T  5899057 tt 5899056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 10956861 - 10956954
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||  |||||||||||||||    
T  10956861 aaccccttcagccatcggaatatcttccgccttctcgaaggtccttgcagtctaactacactaggagttttaggtagtcccacaagcattcacc 10956954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 43422257 - 43422368
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||||||  || |||||||||||||||||||||| |||||||||||||||||||  ||| ||||||| |||| ||||||||||||||    
T  43422257 tacaccttaaccccttcagctctcagaatgtcttccgccttctcgaatgtccttgcagtccaactacgctagaaattttaggtagttccacaagcattca 43422356  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  43422357 ccataacatctt 43422368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 457647 - 457549
Alignment:
Q  24 cttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctctt 122  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||| |||| ||||    
T  457647 cttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataacatctt 457549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 6064305 - 6064409
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||| ||||    
T  6064305 aaccccttcagtcatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataac 6064404  T
Q  118 ctctt 122  Q
     ||||    
T  6064405 atctt 6064409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18097619 - 18097719
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| |||| |||||||||||||||    
T  18097619 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttatgtagttccacaagcattcac 18097718  T
Q  112 c 112  Q
    |    
T  18097719 c 18097719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 4309017 - 4309127
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||    
T  4309017 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcac 4309116  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  4309117 cataacatctt 4309127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 28138028 - 28138138
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaagg-tccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||| ||||  ||||| |||| | |||||||||||||    
T  28138028 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagaatccttgcagtccaactacattaggtgttttaggtagtttcacaagcattcac 28138127  T
Q  112 cttaacctctt 122  Q
    | |||||||||    
T  28138128 cataacctctt 28138138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 43227833 - 43227723
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||    
T  43227833 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcac 43227734  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  43227733 cataacatctt 43227723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 3306423 - 3306342
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  3306423 agtttacaccctaacctcttcagtcatcggaatgtcttccgccttctcgaagatgcttgtagtccaactactctaggaattt 3306342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 6064101 - 6064183
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||||| | |||| |||||||||||| |||||||||    
T  6064101 agtttacaccctcaacctcttcagccatcggaatatcttccgccttctcgaagatgcttgtagtccaactacactaggaattt 6064183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 6064286 - 6064372
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  6064286 atccacaagtatacacctcaaccccttcagtcatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggag 6064372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 42991751 - 42991641
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| |||   ||||||||||| ||    
T  42991751 caccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtactcccacaagcatttac 42991652  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  42991651 cataacatctt 42991641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 7e-20
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 5899362 - 5899293
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaacta 76  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||| ||||||||||    
T  5899362 agtttacaccctaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaacta 5899293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 23636526 - 23636422
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||| |    ||||||  ||||||||| | |||| ||||| |||||||||| ||||    
T  23636526 taacctcttcagccatcggaatgtcttccgccttctcgaagatccttgtatcgaaactacgctaggaatttcaggtagttccactagcattcaccataac 23636427  T
Q  118 ctctt 122  Q
    |||||    
T  23636426 ctctt 23636422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 43422067 - 43422145
Alignment:
Q  9 tttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||| |||||||||    
T  43422067 tttacactctaacctcttcagccatcagaatgtcttccgccttctcgaagatccttg-tgtccaactacactaggaattt 43422145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 10956658 - 10956728
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactac 77  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||||| | |||| |||||||||||    
T  10956658 agtttacaccctagcctcttcagccattggaatgtcttccgccttctcgaagatgcttgtagtccaactac 10956728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 11169866 - 11169781
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||| | |||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  11169866 atccacaagtatacacttcaacccctttagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 11169781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 28100795 - 28100905
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| |||||||||| |||| || ||||| |||||||||| |||||| ||||||||| ||| ||||  ||||| |||| |||||||||||||||    
T  28100795 caccttaacctcttcagccattggaacgttttccgtcttctcgaagagtccttacagtccaacgacactaggtgttttaggtagttccacaagcattcac 28100894  T
Q  112 cttaacctctt 122  Q
    | |||||||||    
T  28100895 cataacctctt 28100905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7607071 - 7607130
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactac 77  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  7607071 taacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactac 7607130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 457856 - 457774
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||||||| || |||| ||||||| ||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  457856 agtttacactctcaacctcttcagcgatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 457774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 35918685 - 35918795
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||| ||||| ||| |||||||| |||||||||| |||||||||||||||||||| ||| | ||||| ||||  ||||| ||||||||    
T  35918685 caccttaacctcttcaaccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactagaagttttaggtagtcccacacgcattcac 35918784  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  35918785 cataacatctt 35918795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 53916286 - 53916348
Alignment:
Q  26 tcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||||  |||||||||    
T  53916286 tcagccatcggaatgtcttccgccttctcgaagatccttatagtccaactacgctaggaattt 53916348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 890403 - 890550
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtcca-actacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| ||||||||||| |||||||| | | |||| |||||| |||||| |||||   |||||||||| |||| ||||||||     
T  890403 agtttacaccctaacctcttcaaccatcggaatgccttccgccct-ttgaagatccttg-agtccagactactcaaggaattttaggtagttccacaagt 890500  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
       |||||||||||||| ||||||||||| | |||||  |||||| ||||    
T  890501 gcacaccttaacctcttcagccatcggaatgccttcccccttctcaaaga 890550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 11170050 - 11169969
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||  |||| | |||| |||||||||||  |||||||||    
T  11170050 agtttacacctcaacctcttcagccatcggaatgtcttccgccttcatgaagatgcttgtagtccaactacgctaggaattt 11169969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 28100680 - 28100767
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatacta 178  Q
    |||||| ||||||||  | |||||||||| ||| ||||||||||| |||||||| |||||||||| |||||||||||||| ||| ||||    
T  28100680 aagtagctccacaagtttacaccttaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccatctacacta 28100767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 23636560 - 23636485
Alignment:
Q  80 taggaattttaagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
    ||||||||||| |||| |||||||| |  ||| |||||||||| ||||||||||| |||||||| |||||||||||    
T  23636560 taggaattttaggtagctccacaagtacacactttaacctcttcagccatcggaatgtcttccgccttctcgaaga 23636485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 457671 - 457586
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| || | ||| |||||||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  457671 atccacaagtatacacctcaaacacttcagccatcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 457586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 10956842 - 10956927
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||||||||||  ||||||| |||||||||| |||||||||||| ||||| ||||||||    
T  10956842 atccacaagtatacacctcaaccccttcagccatcggaatatcttccgccttctcgaag-gtccttgcagtctaactacactaggag 10956927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 35918604 - 35918661
Alignment:
Q  124 agccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||| |||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  35918604 agccctcggaatgtcttccgccttctcgaa-agtccttgcagtccaactacactaggag 35918661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 7607069 - 7607129
Alignment:
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||||| ||||||| ||| |||||||| ||||||||||| |||||| ||||||||||    
T  7607069 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaacta 7607129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 28137913 - 28138001
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactag 179  Q
    |||||| ||||||||  | |||||||| | ||| ||||||||||| |||||||  |||||| ||| |||||||||||||||||| |||||    
T  28137913 aagtagctccacaagtttacaccttaatcccttcagccatcggaatgtcttcctccttctcaaag-gtccttgcagtccaactacactag 28138001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 5899356 - 5899285
Alignment:
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||| ||||||||| ||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| ||||||    
T  5899356 caccctaacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactatgctagga 5899285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 18097504 - 18097586
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||||  ||| ||| ||||||||||| |||||||  |||||||||| ||||||||||||||||||    
T  18097504 aagtagctccacaagtttacacctccaccccttcagccatcggaatgtcttccaccttctcgaag-gtccttgcagtccaacta 18097586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 5899179 - 5899102
Alignment:
Q  96 atccacaagcattcaccttaacctcttt-agccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||| || |||||||||| | || |||| ||||||  ||||||| |||||||||| ||||||||||||||||||    
T  5899179 atccacaagtatacaccttaacccccttcagccctcggaatatcttccgccttctcgaag-gtccttgcagtccaacta 5899102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 6064114 - 6064179
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||||| |||||||||||  ||||||| ||||||||||| | |||| |||||||||| |||||||    
T  6064114 aacctcttcagccatcggaatatcttccgccttctcgaaga-tgcttgtagtccaactacactagga 6064179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 890503 - 890568
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactac 77  Q
    ||||| ||||| ||||||||||||||||| ||||| ||||||| ||| | |||| | |||||||||    
T  890503 acaccttaacctcttcagccatcggaatgccttcccccttctcaaagattcttgtaatccaactac 890568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 3316137 - 3316089
Alignment:
Q  124 agccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||    
T  3316137 agccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaacta 3316089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 43422246 - 43422322
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||| || |||||||||| ||| |||  || ||| |||||||| |||||||||  ||||||||||||||||||    
T  43422246 atccacaagtatacaccttaaccccttcagctctcagaatgtcttccgccttctcgaat-gtccttgcagtccaacta 43422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 890680 - 890751
Alignment:
Q  96 atccacaagcattcaccttaacctcttt-agccatcggaacgtcttccgtcttctcgaagagtccttgcagtc 167  Q
    ||||||||| |  |||||||||| | || ||||||||||| |||||||| ||||||||||| |||||||||||    
T  890680 atccacaagtaaacaccttaacccccttcagccatcggaatgtcttccgccttctcgaaga-tccttgcagtc 890751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 3306417 - 3306354
Alignment:
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||| ||||||||| || |||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  3306417 caccctaacctcttcagtcatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 3306354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 11170064 - 11169981
Alignment:
Q  89 taagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||| ||||||||  | ||||| |||||||| ||||||||||| |||||||| ||||  ||||| | |||| ||||||||||    
T  11170064 taagtagctccacaagtttacacctcaacctcttcagccatcggaatgtcttccgccttcatgaaga-tgcttgtagtccaacta 11169981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 43422076 - 43422141
Alignment:
Q  114 taacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||||||| ||||||| ||| |||||||| ||||||||||| ||||||  ||||||||| |||||||    
T  43422076 taacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttg-tgtccaactacactagga 43422141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 3e-71; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 3e-71
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 12396500 - 12396675
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||    
T  12396500 agtttacaccctaaccccgtcagccatctgaatgtcttccgccttctcgaaggtccttgcagtccaactaaactaggaattttaggtagttccacaagca 12396599  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  12396600 ttcaccttaacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggag 12396675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 3e-71
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 12401442 - 12401617
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||    
T  12401442 agtttacaccctaaccccgtcagccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactaaactaggaattttaggtagttccacaagca 12401541  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  12401542 ttcaccttaacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggag 12401617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 8e-66
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 3825212 - 3825389
Alignment:
Q  7 agtttacaccc--taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    |||||||||||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| | || |||||||| |||| ||||||||    
T  3825212 agtttacaccccttaaacccttcagccctcagaatgtcttccgccttctcgaaggtccttgcagtccaactatactatgaattttaggtagttccacaag 3825311  T
Q  105 cattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3825312 cattcaccttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggag 3825389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 16454938 - 16454778
Alignment:
Q  22 cccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctct 121  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| |||| ||||||| |||||||||||||||||    
T  16454938 cccttcagtcatcggaatgtcttctgccttctcgaaggtccttgcagtccaactacactaagaattttaggtagttccacaaacattcaccttaacctct 16454839  T
Q  122 ttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    | |||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||    
T  16454838 tcagccatcggaacgttttccgccttctcaaagagtccttgcagtccaactacactaggag 16454778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 12 - 181
Target Start/End: Original strand, 18535532 - 18535696
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||| ||||||||||| |||| | |||||  || ||     
T  18535532 acaccttaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgtagtcc----acactaggaattttaggtagtttcacaaatatccat 18535627  T
Q  112 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||||||||| ||||||||| ||||||||||  |||| |||||| |||||||||||||||| |||||||    
T  18535628 cttaacctcttcagccatcgggacgtcttccgcgttctagaagag-ccttgcagtccaactacactagga 18535696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 9174975 - 9175086
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||    
T  9174975 tacaccttaaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagtcccacaagcattca 9175074  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  9175075 ccataacatctt 9175086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 8e-35
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 14788220 - 14788330
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||    
T  14788220 acaccttaaccccttcagacctcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactaggaattttaggtagttccacaagcattcac 14788319  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  14788320 cataacatctt 14788330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 8e-35
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 22801559 - 22801669
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  22801559 acaccttaaccccttctgccctcggaatgtcttccgccttctcgaatgtccttgcagtccaactacactaggaattttaggtagttccacaagcattcac 22801658  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  22801659 cataacatctt 22801669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 22045228 - 22045331
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacc 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| ||||     
T  22045228 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataaca 22045327  T
Q  119 tctt 122  Q
    ||||    
T  22045328 tctt 22045331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 36920320 - 36920430
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||||||||||    
T  36920320 acaccttatccccttcaaccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaagcattcac 36920419  T
Q  112 cttaacctctt 122  Q
    | ||| |||||    
T  36920420 cataatctctt 36920430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 47564302 - 47564192
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||  ||||||||||| |||| | |||||||||||||    
T  47564302 acaccttaaccccttcagccatcagaatattttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagtttcacaagcattcac 47564203  T
Q  112 cttaacctctt 122  Q
    | |||||||||    
T  47564202 cataacctctt 47564192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 22781252 - 22781353
Alignment:
Q  22 cccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctc 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| |||| ||    
T  22781252 cccttcagccatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataacatc 22781351  T
Q  121 tt 122  Q
    ||    
T  22781352 tt 22781353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 16932659 - 16932764
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaa 116  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||| |||    
T  16932659 taaccacttcagccatcggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccataa 16932758  T
Q  117 cctctt 122  Q
    | ||||    
T  16932759 catctt 16932764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 36379773 - 36379662
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| ||||||||| |||||||||||||  ||||| |||||||||||||||||||||||||||||  | | ||||||| |||| ||||||||||||||    
T  36379773 tacaccttaacccctttagccatcggaatgatttccgtcttctcgaaggtccttgcagtccaactacgctggcaattttaggtagttccacaagcattca 36379674  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  36379673 ccataacatctt 36379662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 16454851 - 16454741
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| || |||||||||||| ||| |||||||||||||||||||| ||||| ||||| |||| |||||||||||||||    
T  16454851 caccttaacctcttcagccatcggaacgttttccgccttctcaaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcac 16454752  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  16454751 cataacatctt 16454741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 22045025 - 22045106
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  22045025 agtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 22045106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 24880033 - 24879959
Alignment:
Q  36 gaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||    
T  24880033 gaatgtcttccaccttctcgaaggtccttgcagtccaactactctaggaattttaggtagttccacaagcattca 24879959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 16932455 - 16932536
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| | |||| |||||||||||  |||||||||    
T  16932455 agtttacaccctaacctcttcagccatcggaatgtcttccgtcttctcgaagatgcttgtagtccaactacgctaggaattt 16932536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 11007080 - 11007184
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||| ||||    
T  11007080 aaccacttcagccatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagctttcaccataac 11007179  T
Q  118 ctctt 122  Q
     ||||    
T  11007180 atctt 11007184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 12396602 - 12396712
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||| ||||| ||||| | || |||||||||||||||    
T  12396602 caccttaacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggagttttaggcagttccacaagcattcac 12396701  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  12396702 cataacatctt 12396712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 12401544 - 12401654
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||| ||||| ||||| | || |||||||||||||||    
T  12401544 caccttaacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggagttttaggcagttccacaagcattcac 12401643  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  12401644 cataacatctt 12401654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 22781230 - 22781316
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| || | ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  22781230 atccacaagtatacacctcaatcccttcagccatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggag 22781316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 7e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 22133082 - 22133163
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  22133082 agtttacaccctaacctcttcagccatcaaaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 22133163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 14788119 - 14788292
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtc-caactacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| |||||||||||||||||||| | | | || ||||||  |||  |||||| | ||| |||||| |||| ||||||||     
T  14788119 agtttacaccctaacctcttcaaccatcggaatgtcttccgcccttttgtagatccttg-tgtctaaactactaaaggcattttaggtagttccacaagt 14788217  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
       |||||||||| ||| || | |||||| |||||||| |||||||||| |||||||||||||| ||| |||||||    
T  14788218 gcacaccttaaccccttcagacctcggaatgtcttccgccttctcgaag-gtccttgcagtccatctacactagga 14788292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 9174779 - 9174861
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| |||||||||||||||||||||| |||||||||||| | |||| |||||||||||  |||||||||    
T  9174779 agtttacaccctcaacctcttcagccatcggaatgtcttctgccttctcgaagatgcttggagtccaactacgctaggaattt 9174861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 11007061 - 11007147
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| ||||||| |||  ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  11007061 atccacaagtatacacctcaaccacttcagccatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggag 11007147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 16932639 - 16932727
Alignment:
Q  96 atccacaagcattcacct--taacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || |||||  ||||| ||| |||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  16932639 atccacaagtatacacctcataaccacttcagccatcggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggag 16932727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 36379784 - 36379708
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||| || |||||||||| ||||||||||||||| |  |||||||||||||||| ||||||||||||||||||    
T  36379784 atccacaagtatacaccttaacccctttagccatcggaatgatttccgtcttctcgaag-gtccttgcagtccaacta 36379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 18535630 - 18535714
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccaca 102  Q
    ||||| ||||||||||||| | ||||||||| |||| ||||  |||||||||||||||||| ||||||||||| |||| ||||||    
T  18535630 taacctcttcagccatcgggacgtcttccgcgttctagaagagccttgcagtccaactacactaggaattttatgtagttccaca 18535714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 3577635 - 3577775
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtc---cttgcagtccaactacaataggaattttaagtagatccacaagcat 107  Q
    |||||| ||||| ||||| ||||||||||| |||||| ||||| |||| ||   |||||| |||||||||| ||||||||||| |||| ||||||||  |    
T  3577635 tacaccataacctcttcaaccatcggaatgccttccgacttcttgaagatcatccttgca-tccaactacactaggaattttaggtagttccacaagtct 3577733  T
Q  108 tcaccttaacctctttagccatcggaacgtcttccgtcttct 149  Q
     |||| ||||||||| ||||||| ||| | |||||| |||||    
T  3577734 acaccataacctcttaagccatctgaaggccttccgccttct 3577775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 22781044 - 22781127
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtctt-ccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| | |||| |||||||||||  |||||||||    
T  22781044 agtttacaccctcaacctcttcagccatcggaatgtcttcccgccttctcgaagatgcttgtagtccaactacgctaggaattt 22781127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 22801458 - 22801631
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    ||||||||||||| || ||||| ||||||||||| |||||||| | | |||| ||||||  |||||| ||||   ||| |||||| |||| ||||||||     
T  22801458 agtttacaccctatcctcttcaaccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggtattttaggtagttccacaagt 22801556  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
       |||||||||| |||  ||| |||||| |||||||| |||||||||  |||||||||||||||||| |||||||    
T  22801557 gcacaccttaaccccttctgccctcggaatgtcttccgccttctcgaat-gtccttgcagtccaactacactagga 22801631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 22045209 - 22045294
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| |||||| |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  22045209 atccacaagtatacacctcaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactaggag 22045294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 9174964 - 9175048
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||||||| || |||||||||| ||| |||| ||||||  ||||||| |||||||||| |||||||||||||||||| |||||||    
T  9174964 atccacaagtatacaccttaaccccttcagccctcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactagga 9175048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 36380063 - 36379916
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||| ||||||| ||||| ||||||||||| |||||| | | | ||||   |||||  ||  |||||  ||||||||||| |||| |||||||| |    
T  36380063 agtttacaacctaacctcttcaaccatcggaatgccttccgtccttttgaagactcttgct-tcgcactacgctaggaattttaggtagctccacaagta 36379965  T
Q  107 ttcaccttaacctctttagccatcggaacgtcttccgtcttctcgaaga 155  Q
      |||||||||||||||||| ||||||| |||||| | |||||||||||    
T  36379964 cacaccttaacctctttagctatcggaatgtcttctgccttctcgaaga 36379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 16932442 - 16932524
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||| ||||||||||| |||||||||||||||||||| | |||| ||||||||||    
T  16932442 aagtagctccacaagtttacaccctaacctcttcagccatcggaatgtcttccgtcttctcgaaga-tgcttgtagtccaacta 16932524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 36920220 - 36920384
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtcc-aactacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| ||||||||||| |||||||| | | |||| ||||||  |||| ||||||   ||||| |||| |||| ||||||||     
T  36920220 agtttacaccctaacctcttcaaccatcggaatgccttccgcccttttgaagatccttg-tgtccaaactactcaaggaa-tttaggtagttccacaagt 36920317  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
       ||||||| || ||| | ||||| ||| |||||||| |||||||||| ||||||||||||||||||    
T  36920318 gcacaccttatccccttcaaccatcagaatgtcttccgccttctcgaag-gtccttgcagtccaacta 36920384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 16454965 - 16454879
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatacta 178  Q
    |||||| ||||||||  |||||||||||| ||| || |||||||| |||||| | |||||||||| |||||||||||||||||| ||||    
T  16454965 aagtagctccacaagttttcaccttaacc-cttcagtcatcggaatgtcttctgccttctcgaag-gtccttgcagtccaactacacta 16454879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 3577453 - 3577553
Alignment:
Q  24 cttcagccatcggaatgtcttccgccttctcgaag---gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctc 120  Q
    ||||| |||||||||||||||||||||||| ||||    |||||||| |||||||||| ||||||||||| |||| |||| |||  | |||| |||||||    
T  3577453 cttcaaccatcggaatgtcttccgccttcttgaagacaatccttgca-tccaactacactaggaattttaggtagttccataagtctacaccataacctc 3577551  T
Q  121 tt 122  Q
    ||    
T  3577552 tt 3577553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 5100364 - 5100253
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| ||| |||||||||| ||||||| ||||  | ||||||||||||||||||| || || ||   |||| |||||| |||| || |||||||||||    
T  5100364 tacaccttaatcccttcagccctcggaatatcttgtgtcttctcgaaggtccttgcaatctaattatgctaggtattttaggtagttcaacaagcattca 5100265  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  5100264 ccataacatctt 5100253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 22045012 - 22045094
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  22045012 aagtagctccacaagtttacaccctaacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 22045094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 24880158 - 24879993
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtcc-aactacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| ||||||||||| |||||||| | |  ||| ||||||  |||| ||||||   ||| |||||| |||| ||||||||     
T  24880158 agtttacaccctaacctcttcaaccatcggaatgccttccgcccttttcaagatccttg-tgtccaaactactcaaggcattttaggtagttccacaagt 24880060  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
       |||||||| |||||  ||| || ||| |||||||  |||||||||| ||||||||||||||||||    
T  24880059 gcacaccttaatctcttctgccttcagaatgtcttccaccttctcgaag-gtccttgcagtccaacta 24879993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 47564403 - 47564238
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaa-ctacaataggaattttaagtagatccacaagc 105  Q
    |||||||||| ||||| ||||| ||||||||||||||||| || | | |||| ||||||  |||||| ||||   ||||||||||   || |||||||      
T  47564403 agtttacaccataacctcttcaaccatcggaatgtcttcctcccttttgaagatccttgt-gtccaaactactcaaggaattttagtaagttccacaact 47564305  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |  |||||||||| ||| ||||||| |||  | ||||| |||||||||| ||||||||||||||||||    
T  47564304 acacaccttaaccccttcagccatcagaatattttccgccttctcgaag-gtccttgcagtccaacta 47564238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 11006876 - 11006958
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||| | |||| |||||||||||||||| ||||| |||||||||||| | |||| ||| |||||||  |||||||||    
T  11006876 agtttacaccttcaacctcttcagccatcggaatatcttctgccttctcgaagatgcttgtagttcaactacgctaggaattt 11006958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 36379963 - 36379881
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagta 94  Q
    ||||| ||||| ||| ||| |||||||||||||| |||||||||||| |||||| |  | ||||||| ||||||||| |||||    
T  36379963 acaccttaacctctttagctatcggaatgtcttctgccttctcgaagatccttgtatccaaactacactaggaatttcaagta 36379881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 5100645 - 5100603
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgcc 49  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||    
T  5100645 agtttacaccctaacctcttcaaccatcggaatgccttccgcc 5100603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 3577831 - 3577925
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtc---cttgcagtccaactacaataggaattttaagtagatccacaa 103  Q
    |||||| ||||| ||||| || |||||||| |||| ||||||| |||| ||   |||||| ||||| |||| |||||||||||||||| |||||||    
T  3577831 tacaccataacctcttcaaccgtcggaatgccttctgccttcttgaagatcatccttgca-tccaagtacactaggaattttaagtagttccacaa 3577925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 5100538 - 5100501
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcga 56  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  5100538 aacctcttcagccatcggaatgtcttccgccttttcga 5100501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 22133069 - 22133151
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| ||||||||  | |||| ||||||||| |||||||  || |||||||| ||||||||||| | |||| ||||||||||    
T  22133069 aagtagctccacaagtttacaccctaacctcttcagccatcaaaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 22133151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 3e-65; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 15533322 - 15533495
Alignment:
Q  9 tttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcatt 108  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||| |||||    
T  15533322 tttacacccgaaccccttcagccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacacttggaattttaggtagttccacaggcatt 15533421  T
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    || ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  15533422 caacttaacctcttcagccctcggaacgtcttccgccttctcgaagagtccttgcagtccaactacactaggag 15533495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 30729446 - 30729563
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagca 106  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||    
T  30729446 agtttacactttaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttacacaagca 30729545  T
Q  107 ttcaccttaacctcttta 124  Q
    |||||| |||| ||||||    
T  30729546 ttcaccataacatcttta 30729563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 3395805 - 3395694
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  3395805 tacaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaggtagttccacaaacattca 3395706  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  3395705 ccataacatctt 3395694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 3630710 - 3630821
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattca 110  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||    
T  3630710 tacaccttaaccccttcagccctcgaaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaagcattca 3630809  T
Q  111 ccttaacctctt 122  Q
    || |||| ||||    
T  3630810 ccataacatctt 3630821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 8e-32
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 26066910 - 26067003
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  26066910 aaccccttcagccatcggaatgtcttccgtcttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 26067003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 33310655 - 33310562
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  33310655 aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcacc 33310562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 26944818 - 26944714
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaac 117  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||   ||||||||||| |||| |||||||| || |||| ||||    
T  26944818 taaccccttcagccatcgaaatgccttccgccttttcgaaggtccttgcagtccaactatgctaggaattttaggtagttccacaagtatccaccataac 26944719  T
Q  118 ctctt 122  Q
    |||||    
T  26944718 ctctt 26944714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 15533427 - 15533522
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  15533427 taacctcttcagccctcggaacgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcacc 15533522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 3396000 - 3395919
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||| | |||| |||||||||||  |||||||||    
T  3396000 agtttacaccctaacctcttcagccatcggaatgtcttctgccttctcgaagatgcttgtagtccaactacgctaggaattt 3395919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 3630516 - 3630597
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||||| ||| |||||||| |||||||||    
T  3630516 agtttacaccctaacctctttagccatcggaatgtcttccgccttctcaaagatccttgtagttcaactacactaggaattt 3630597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 26066891 - 26066976
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  26066891 atccacaagtatacacctcaaccccttcagccatcggaatgtcttccgtcttctcgaag-gtccttgcagtccaactacactaggag 26066976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 33310859 - 33310777
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  33310859 agtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 33310777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 26066706 - 26066824
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||  ||||||||| | |||| || |||||     
T  26066706 agtttacaccctcaacctcttcagccatcggaatgtcttcctccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaaga 26066805  T
Q  106 attcaccttaacctcttta 124  Q
     |  ||| |||||||||||    
T  26066806 ctataccataacctcttta 26066824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 3395816 - 3395740
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||| || |||||||||| ||| |||| |||||| |||||||| |||||||||| ||||||||||||||||||    
T  3395816 atccacaagtatacaccttaaccccttcagccctcggaatgtcttccgccttctcgaag-gtccttgcagtccaacta 3395740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 28038372 - 28038494
Alignment:
Q  25 ttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaacta--caataggaattttaagtagatccacaagcattcaccttaacctctt 122  Q
    |||| |||||||||||||||| ||||||| |||| | |||||| ||| ||||  |||||||||||||| |||| ||||||||  | ||||||||||||||    
T  28038372 ttcaaccatcggaatgtcttctgccttcttgaagattcttgca-tccgactaaacaataggaattttaggtagttccacaagtctacaccttaacctctt 28038470  T
Q  123 tagccatcggaacgtcttccgtct 146  Q
       ||||||||| ||| |||||||    
T  28038471 cgaccatcggaatgtcatccgtct 28038494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 30729456 - 30729523
Alignment:
Q  113 ttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||| ||| ||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||    
T  30729456 ttaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacactagga 30729523  T

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Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 3630503 - 3630593
Alignment:
Q  90 aagtagatccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||| ||||||||  | |||| ||||||||||||||||||||| |||||||| |||||| |||| |||||| ||| |||||| |||||||    
T  3630503 aagtagctccacaagtttacaccctaacctctttagccatcggaatgtcttccgccttctcaaaga-tccttgtagttcaactacactagga 3630593  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 33310674 - 33310589
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactaggag 182  Q
    ||||||||| || ||||| |||| ||| |||| ||||||  ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  33310674 atccacaagtatacacctcaaccccttcagccctcggaatatcttccgccttctcgaag-gtccttgcagtccaactacactaggag 33310589  T

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Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 11137892 - 11137760
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaagg---tccttgcagtccaactacaataggaattttaagtagatccacaagcattcacctta 115  Q
    |||| ||||| ||||||||||| |||||||||||  ||||    |||||||| |||||||||| ||||||||||| |||| ||||||||  | |||| ||    
T  11137892 aacctcttcaaccatcggaatgccttccgccttcatgaagaccatccttgca-tccaactacactaggaattttaggtagttccacaagtctacaccata 11137794  T
Q  116 acctctttagccatcggaacgtcttccgtcttct 149  Q
    ||| ||| | ||||||||| | |||||| |||||    
T  11137793 accacttcaaccatcggaaagccttccgccttct 11137760  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 3630699 - 3630775
Alignment:
Q  96 atccacaagcattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    ||||||||  || |||||||||| ||| |||| ||| || |||||||| |||||||||| ||||||||||||||||||    
T  3630699 atccacaactatacaccttaaccccttcagccctcgaaatgtcttccgccttctcgaag-gtccttgcagtccaacta 3630775  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 33310846 - 33310789
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  33310846 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 33310789  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 3395994 - 3395931
Alignment:
Q  109 caccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||| ||||||||| ||||||||||| |||||| | ||||||||||| | |||| ||||||||||    
T  3395994 caccctaacctcttcagccatcggaatgtcttctgccttctcgaaga-tgcttgtagtccaacta 3395931  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 26944819 - 26944752
Alignment:
Q  113 ttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    |||||| ||| |||||||| || | |||||| ||| |||||| ||||||||||||||||||| ||||||    
T  26944819 ttaaccccttcagccatcgaaatgccttccgccttttcgaag-gtccttgcagtccaactatgctagga 26944752  T

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Target: chr6; HSP #24
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 28038455 - 28038544
Alignment:
Q  11 tacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    |||||| ||||| ||||  ||||||||||||| ||||   |||||||| |||||||| || | |||||||| |||||||| |||| ||||||||    
T  28038455 tacaccttaacctcttcgaccatcggaatgtcatccg---tctcgaagatccttgca-tctagctacaataagaattttaggtagttccacaag 28038544  T

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Target: scaffold1674 (Bit Score: 122; Significance: 8e-63; HSPs: 2)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 189 - 357
Alignment:
Q  7 agtttacaccc--taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaag 104  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||  |||||||    
T  189 agtttacaccccataaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtccaactacactaggagttttaggtagtcccacaag 288  T
Q  105 cattcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  289 cattcaccttaacctcttcagccatcggaacgtcttccgacttctcgaagagtccttgcagtccaacta 357  T

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Target: scaffold1674; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 293 - 403
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||  ||||||||||| ||||  ||||  ||||||||    
T  293 caccttaacctcttcagccatcggaacgtcttccgacttctcgaagagtccttgcagtccaactacgctaggaattttaggtagtcccacttgcattcac 392  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  393 cataacatctt 403  T

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Target: scaffold0025 (Bit Score: 121; Significance: 3e-62; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 69941 - 70097
Alignment:
Q  18 taaccccttcagccatcggaatgtcttccgccttctcgaa-ggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaa 116  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  69941 taaccccttcagccctcggaatgtcttccgccttctcgaaaggtccttgcagtccaactacactaggaattttaggtagctccacaagcattcaccttaa 70040  T
Q  117 cctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  70041 cctcttcagccatcggagcgtcttccgtcttctcgaagagtacttgcagtccaacta 70097  T

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Target: scaffold0025; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 70033 - 70143
Alignment:
Q  13 caccctaaccccttcagccatcggaatgtcttccgccttctcgaag-gtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    |||| ||||| ||||||||||||||  |||||||| |||||||||| || ||||||||||||||||  ||||||||||| ||||  ||||||||||||||    
T  70033 caccttaacctcttcagccatcggagcgtcttccgtcttctcgaagagtacttgcagtccaactacgctaggaattttaggtagtcccacaagcattcac 70132  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  70133 cataacatctt 70143  T

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Target: scaffold0025; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 69941 - 70008
Alignment:
Q  114 taacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
    ||||| ||| |||| |||||| |||||||| |||||||||  |||||||||||||||||| |||||||    
T  69941 taaccccttcagccctcggaatgtcttccgccttctcgaaaggtccttgcagtccaactacactagga 70008  T

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Target: scaffold0005 (Bit Score: 75; Significance: 8e-35; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 8e-35
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 51510 - 51400
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||    
T  51510 acaccttaaccccttcagacctcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactaggaattttaggtagttccacaagcattcac 51411  T
Q  112 cttaacctctt 122  Q
    | |||| ||||    
T  51410 cataacatctt 51400  T

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Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 51611 - 51438
Alignment:
Q  7 agtttacaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtc-caactacaataggaattttaagtagatccacaagc 105  Q
    |||||||||||||||| ||||| |||||||||||||||||||| | | | || ||||||  |||  |||||| | ||| |||||| |||| ||||||||     
T  51611 agtttacaccctaacctcttcaaccatcggaatgtcttccgcccttttgtagatccttg-tgtctaaactactaaaggcattttaggtagttccacaagt 51513  T
Q  106 attcaccttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactagga 181  Q
       |||||||||| ||| || | |||||| |||||||| |||||||||| |||||||||||||| ||| |||||||    
T  51512 gcacaccttaaccccttcagacctcggaatgtcttccgccttctcgaag-gtccttgcagtccatctacactagga 51438  T

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Target: scaffold0133 (Bit Score: 72; Significance: 5e-33; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 4365 - 4211
Alignment:
Q  24 cttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcaccttaacctcttt 123  Q
    |||||||||||  ||||| ||||| |||||||||||||||||||||||||||||| ||||||||| | |||| | | |||| || |||| ||| |||||     
T  4365 cttcagccatcataatgttttccgacttctcgaaggtccttgcagtccaactacactaggaatttgaggtagtttcccaagtatccaccataagctcttc 4266  T
Q  124 agccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactatactag 179  Q
    ||||| ||||| |||||||| |||||||||||| |||||||||||||||| |||||    
T  4265 agccaacggaatgtcttccgccttctcgaagag-ccttgcagtccaactacactag 4211  T

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Target: scaffold0133; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 4269 - 4193
Alignment:
Q  24 cttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatcca 100  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||| ||||||| |||| ||||    
T  4269 cttcagccaacggaatgtcttccgccttctcgaagagccttgcagtccaactacactagaaattttaggtagttcca 4193  T

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Target: scaffold0011 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 35387 - 35277
Alignment:
Q  12 acaccctaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcac 111  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||  |||| |||||| |||| |||||||||||||||    
T  35387 acaccttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtctaactacgctaggtattttaggtagttccacaagcattcac 35288  T
Q  112 cttaacctctt 122  Q
    | |||||||||    
T  35287 cataacctctt 35277  T

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Target: scaffold0140 (Bit Score: 66; Significance: 2e-29; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 23890 - 23797
Alignment:
Q  19 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaagtagatccacaagcattcacc 112  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||  |||||||||||||||    
T  23890 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtccaactacactaggagttttaggtagtcccacaagcattcacc 23797  T

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Target: scaffold0140; HSP #2
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 24095 - 24013
Alignment:
Q  7 agtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattt 88  Q
    |||||||||| | |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||    
T  24095 agtttacaccatcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 24013  T

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Target: scaffold0140; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 24082 - 24025
Alignment:
Q  115 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaacta 173  Q
    |||||||| ||||||||||| |||||||| ||||||||||| | |||| ||||||||||    
T  24082 aacctcttcagccatcggaatgtcttccgccttctcgaaga-tgcttgtagtccaacta 24025  T

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