View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2700R-Insertion-8 (Length: 635)

Name: NF2700R-Insertion-8
Description: NF2700R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2700R-Insertion-8
NF2700R-Insertion-8
[»] chr4 (54 HSPs)
chr4 (307-506)||(41176623-41176822)
chr4 (307-507)||(21498104-21498304)
chr4 (307-506)||(21497671-21497870)
chr4 (307-506)||(38908034-38908233)
chr4 (307-479)||(7193587-7193759)
chr4 (348-489)||(27048413-27048554)
chr4 (345-489)||(34205998-34206138)
chr4 (360-507)||(27048125-27048276)
chr4 (380-506)||(51469471-51469596)
chr4 (380-506)||(53740172-53740297)
chr4 (380-489)||(15665143-15665252)
chr4 (387-507)||(29669351-29669470)
chr4 (430-489)||(35269051-35269110)
chr4 (380-506)||(991194-991319)
chr4 (380-506)||(36558455-36558580)
chr4 (380-506)||(45427241-45427366)
chr4 (380-489)||(56509599-56509708)
chr4 (396-488)||(28085700-28085792)
chr4 (345-413)||(51564868-51564936)
chr4 (387-506)||(29669667-29669785)
chr4 (380-489)||(34206260-34206370)
chr4 (380-506)||(52214605-52214730)
chr4 (380-489)||(45426941-45427050)
chr4 (381-506)||(51470474-51470598)
chr4 (388-492)||(20545661-20545765)
chr4 (380-476)||(22867074-22867170)
chr4 (381-489)||(43972346-43972454)
chr4 (380-506)||(50858318-50858440)
chr4 (380-506)||(990537-990662)
chr4 (380-506)||(13254373-13254498)
chr4 (380-506)||(50858002-50858127)
chr4 (380-506)||(53739856-53739981)
chr4 (392-489)||(11290171-11290268)
chr4 (430-507)||(29113489-29113565)
chr4 (392-489)||(46528928-46529025)
chr4 (423-496)||(52827230-52827303)
chr4 (398-489)||(5488375-5488466)
chr4 (380-487)||(29734551-29734658)
chr4 (423-489)||(25753610-25753676)
chr4 (392-486)||(50868021-50868115)
chr4 (392-489)||(33912045-33912142)
chr4 (386-467)||(48843044-48843125)
chr4 (430-506)||(23018510-23018585)
chr4 (430-489)||(12016688-12016747)
chr4 (430-489)||(12016896-12016955)
chr4 (430-489)||(43943713-43943772)
chr4 (423-506)||(56511537-56511619)
chr4 (303-333)||(21497900-21497930)
chr4 (303-333)||(21498044-21498074)
chr4 (303-333)||(38907974-38908004)
chr4 (303-333)||(41176563-41176593)
chr4 (398-495)||(12879458-12879555)
chr4 (398-486)||(3055791-3055879)
chr4 (430-506)||(28395217-28395292)
[»] chr2 (45 HSPs)
chr2 (307-506)||(25286248-25286447)
chr2 (307-489)||(901840-902022)
chr2 (345-506)||(30160282-30160443)
chr2 (306-488)||(15061271-15061450)
chr2 (307-489)||(30156132-30156307)
chr2 (354-444)||(29923264-29923354)
chr2 (352-488)||(2333364-2333500)
chr2 (386-497)||(11969048-11969159)
chr2 (380-489)||(3976476-3976585)
chr2 (423-507)||(10849478-10849562)
chr2 (386-489)||(3977008-3977111)
chr2 (422-493)||(10429771-10429842)
chr2 (380-487)||(21213892-21213999)
chr2 (380-506)||(6183355-6183480)
chr2 (423-489)||(10542068-10542134)
chr2 (380-506)||(21214190-21214315)
chr2 (380-506)||(43195774-43195899)
chr2 (392-492)||(10862060-10862160)
chr2 (380-507)||(18901852-18901978)
chr2 (380-506)||(23054316-23054441)
chr2 (392-489)||(15962162-15962259)
chr2 (380-477)||(17509099-17509196)
chr2 (380-489)||(43169232-43169341)
chr2 (430-506)||(42768323-42768398)
chr2 (386-489)||(25441692-25441795)
chr2 (430-496)||(27545114-27545180)
chr2 (430-492)||(44266310-44266372)
chr2 (392-477)||(33532753-33532838)
chr2 (392-489)||(39420699-39420796)
chr2 (345-384)||(10429729-10429768)
chr2 (430-489)||(20998994-20999053)
chr2 (380-455)||(30166118-30166193)
chr2 (430-488)||(883607-883665)
chr2 (303-333)||(25286477-25286507)
chr2 (430-488)||(31761371-31761429)
chr2 (423-489)||(38760322-38760388)
chr2 (395-489)||(39596711-39596805)
chr2 (392-489)||(11349798-11349895)
chr2 (392-489)||(15961805-15961902)
chr2 (392-489)||(28193340-28193437)
chr2 (430-506)||(884097-884173)
chr2 (459-495)||(11967121-11967157)
chr2 (430-506)||(19860077-19860153)
chr2 (448-496)||(26847426-26847474)
chr2 (392-492)||(28193577-28193677)
[»] chr1 (58 HSPs)
chr1 (307-467)||(40367492-40367652)
chr1 (307-489)||(11149428-11149610)
chr1 (303-449)||(463195-463341)
chr1 (307-496)||(2104258-2104440)
chr1 (307-506)||(21638255-21638446)
chr1 (386-507)||(463070-463191)
chr1 (345-467)||(482636-482759)
chr1 (307-393)||(40367835-40367921)
chr1 (345-506)||(19481381-19481541)
chr1 (345-446)||(19481274-19481375)
chr1 (349-493)||(40664169-40664313)
chr1 (49-155)||(36314727-36314834)
chr1 (348-441)||(15985247-15985340)
chr1 (359-492)||(38739869-38740001)
chr1 (380-506)||(2697320-2697445)
chr1 (380-506)||(17419777-17419902)
chr1 (380-506)||(4022114-4022239)
chr1 (369-493)||(13356917-13357042)
chr1 (380-506)||(8520082-8520207)
chr1 (387-489)||(19937048-19937150)
chr1 (345-446)||(14368807-14368907)
chr1 (392-489)||(30604465-30604562)
chr1 (380-489)||(31305701-31305810)
chr1 (388-506)||(33879767-33879884)
chr1 (388-506)||(33964371-33964488)
chr1 (392-489)||(12287850-12287947)
chr1 (392-489)||(38474285-38474382)
chr1 (430-493)||(43361758-43361821)
chr1 (430-489)||(45403480-45403539)
chr1 (380-506)||(20735512-20735637)
chr1 (392-489)||(17294980-17295077)
chr1 (388-489)||(28509392-28509493)
chr1 (392-489)||(29228450-29228547)
chr1 (388-489)||(29383628-29383729)
chr1 (430-495)||(36332152-36332217)
chr1 (380-489)||(43423269-43423378)
chr1 (380-488)||(45264653-45264760)
chr1 (429-488)||(20735794-20735853)
chr1 (392-455)||(29228677-29228740)
chr1 (430-493)||(43361553-43361616)
chr1 (392-489)||(51722255-51722353)
chr1 (380-489)||(35024465-35024573)
chr1 (423-495)||(36332643-36332716)
chr1 (392-489)||(45858657-45858754)
chr1 (398-506)||(1233934-1234041)
chr1 (392-488)||(4187520-4187615)
chr1 (430-506)||(15392144-15392219)
chr1 (159-306)||(36314548-36314698)
chr1 (388-455)||(40642815-40642882)
chr1 (392-479)||(45443222-45443309)
chr1 (430-488)||(39649090-39649148)
chr1 (303-333)||(40367432-40367462)
chr1 (430-488)||(48558327-48558385)
chr1 (392-489)||(18585040-18585137)
chr1 (423-488)||(29413175-29413240)
chr1 (430-479)||(36326946-36326995)
chr1 (423-455)||(10017367-10017399)
chr1 (430-506)||(29273214-29273289)
[»] chr8 (64 HSPs)
chr8 (307-506)||(43984305-43984503)
chr8 (307-426)||(43984112-43984221)
chr8 (49-155)||(19390517-19390624)
chr8 (49-155)||(19410714-19410821)
chr8 (49-155)||(19457733-19457840)
chr8 (49-155)||(19523238-19523345)
chr8 (386-489)||(34248073-34248176)
chr8 (49-146)||(19345103-19345201)
chr8 (380-489)||(34248349-34248458)
chr8 (50-155)||(19376552-19376658)
chr8 (50-155)||(19468667-19468773)
chr8 (50-155)||(19555588-19555694)
chr8 (380-506)||(18905846-18905971)
chr8 (380-506)||(21085137-21085262)
chr8 (49-145)||(19172901-19172998)
chr8 (155-259)||(19504004-19504108)
chr8 (50-121)||(19404683-19404754)
chr8 (49-155)||(19469603-19469710)
chr8 (49-155)||(19540527-19540634)
chr8 (49-155)||(19592064-19592171)
chr8 (380-506)||(32931391-32931516)
chr8 (370-446)||(7622274-7622351)
chr8 (386-506)||(7621890-7622009)
chr8 (345-413)||(9091233-9091301)
chr8 (49-152)||(19337387-19337491)
chr8 (155-259)||(19345235-19345339)
chr8 (49-152)||(19355407-19355511)
chr8 (47-146)||(19504142-19504242)
chr8 (49-116)||(19287648-19287715)
chr8 (380-506)||(36997156-36997281)
chr8 (430-493)||(42228811-42228874)
chr8 (380-506)||(20298505-20298630)
chr8 (423-493)||(36037223-36037293)
chr8 (430-496)||(39124964-39125030)
chr8 (380-489)||(23027833-23027942)
chr8 (392-489)||(35908680-35908777)
chr8 (155-255)||(19390649-19390749)
chr8 (423-507)||(36039782-36039865)
chr8 (583-622)||(19342969-19343008)
chr8 (583-622)||(19372663-19372702)
chr8 (392-489)||(14019810-14019907)
chr8 (430-506)||(10989023-10989098)
chr8 (430-506)||(10989230-10989305)
chr8 (68-155)||(19370913-19371001)
chr8 (430-506)||(35561706-35561782)
chr8 (386-478)||(40754441-40754532)
chr8 (430-506)||(43599351-43599426)
chr8 (392-455)||(15711498-15711561)
chr8 (390-488)||(14582230-14582328)
chr8 (430-488)||(15011035-15011093)
chr8 (423-489)||(30176469-30176535)
chr8 (392-446)||(38287785-38287839)
chr8 (423-492)||(5496594-5496663)
chr8 (380-489)||(27402118-27402227)
chr8 (380-413)||(36994013-36994046)
chr8 (432-489)||(39588089-39588146)
chr8 (430-507)||(40902381-40902457)
chr8 (306-335)||(43984531-43984560)
chr8 (430-506)||(3183900-3183975)
chr8 (430-506)||(16454624-16454699)
chr8 (270-306)||(19404926-19404962)
chr8 (380-452)||(23027547-23027619)
chr8 (398-490)||(26122748-26122840)
chr8 (430-478)||(39587874-39587922)
[»] chr3 (63 HSPs)
chr3 (311-449)||(34356954-34357093)
chr3 (307-506)||(21750392-21750590)
chr3 (345-489)||(38300757-38300902)
chr3 (307-455)||(48407774-48407912)
chr3 (345-478)||(31564019-31564152)
chr3 (345-489)||(38300288-38300433)
chr3 (345-489)||(31563704-31563848)
chr3 (386-507)||(34356829-34356950)
chr3 (380-506)||(13769279-13769405)
chr3 (380-489)||(3985763-3985872)
chr3 (345-506)||(33909821-33909982)
chr3 (380-489)||(44573316-44573425)
chr3 (380-488)||(34715461-34715569)
chr3 (380-479)||(27219319-27219418)
chr3 (380-506)||(44573629-44573754)
chr3 (345-446)||(33909376-33909477)
chr3 (392-489)||(48511644-48511741)
chr3 (380-489)||(54369029-54369138)
chr3 (389-489)||(10453708-10453808)
chr3 (380-488)||(14170005-14170113)
chr3 (380-487)||(43101378-43101485)
chr3 (435-506)||(48407530-48407601)
chr3 (380-489)||(24539143-24539253)
chr3 (380-506)||(45443270-45443395)
chr3 (392-489)||(10856631-10856728)
chr3 (392-489)||(11244546-11244643)
chr3 (380-465)||(24860090-24860174)
chr3 (430-507)||(44573976-44574052)
chr3 (423-507)||(50692559-50692642)
chr3 (345-383)||(38300560-38300598)
chr3 (387-465)||(47833691-47833769)
chr3 (380-506)||(50203846-50203971)
chr3 (392-489)||(9180370-9180467)
chr3 (430-506)||(22407430-22407505)
chr3 (430-506)||(22407637-22407712)
chr3 (392-476)||(48511428-48511512)
chr3 (430-506)||(50692363-50692438)
chr3 (430-489)||(9179173-9179232)
chr3 (423-478)||(26915149-26915204)
chr3 (430-489)||(36020856-36020915)
chr3 (430-489)||(39078776-39078835)
chr3 (430-489)||(39956679-39956738)
chr3 (430-489)||(49477574-49477633)
chr3 (392-455)||(53966235-53966298)
chr3 (380-446)||(41380714-41380780)
chr3 (303-333)||(48407714-48407744)
chr3 (429-495)||(49637432-49637497)
chr3 (392-489)||(10450429-10450526)
chr3 (392-489)||(10450653-10450750)
chr3 (392-489)||(15820610-15820707)
chr3 (430-507)||(21833564-21833640)
chr3 (392-489)||(24453780-24453877)
chr3 (423-488)||(40230645-40230710)
chr3 (386-455)||(48685356-48685425)
chr3 (432-489)||(49477369-49477426)
chr3 (430-507)||(54591453-54591529)
chr3 (393-493)||(5321538-5321637)
chr3 (430-506)||(9264075-9264150)
chr3 (430-506)||(9264282-9264357)
chr3 (423-507)||(35011897-35011980)
chr3 (459-495)||(45941132-45941168)
chr3 (430-506)||(51642417-51642492)
chr3 (430-506)||(51642624-51642699)
[»] chr6 (35 HSPs)
chr6 (313-506)||(1468885-1469078)
chr6 (307-393)||(1469200-1469286)
chr6 (380-489)||(10418343-10418452)
chr6 (349-493)||(28072473-28072617)
chr6 (416-489)||(27914331-27914404)
chr6 (387-489)||(8144014-8144116)
chr6 (380-506)||(24055098-24055223)
chr6 (49-155)||(19543000-19543107)
chr6 (380-506)||(1744831-1744956)
chr6 (392-489)||(33396309-33396406)
chr6 (380-495)||(31872-31987)
chr6 (345-408)||(28072003-28072065)
chr6 (380-506)||(19054483-19054608)
chr6 (392-489)||(25184212-25184309)
chr6 (387-507)||(12134471-12134590)
chr6 (423-507)||(28149826-28149909)
chr6 (430-489)||(19712614-19712673)
chr6 (380-478)||(21067073-21067171)
chr6 (380-478)||(21088864-21088962)
chr6 (380-489)||(10733443-10733552)
chr6 (430-507)||(24558828-24558904)
chr6 (392-489)||(26842722-26842819)
chr6 (449-489)||(12124709-12124749)
chr6 (430-506)||(16876999-16877074)
chr6 (430-493)||(5269274-5269337)
chr6 (430-489)||(15101116-15101175)
chr6 (431-506)||(17147894-17147968)
chr6 (381-484)||(30539226-30539329)
chr6 (432-506)||(16876819-16876892)
chr6 (430-492)||(27443539-27443601)
chr6 (270-307)||(19543244-19543281)
chr6 (380-489)||(19753609-19753718)
chr6 (392-453)||(26339883-26339944)
chr6 (434-506)||(16590228-16590299)
chr6 (434-506)||(16605081-16605152)
[»] chr5 (44 HSPs)
chr5 (345-506)||(12965235-12965395)
chr5 (380-489)||(29432402-29432511)
chr5 (380-489)||(38663237-38663346)
chr5 (380-506)||(873685-873810)
chr5 (380-507)||(24994062-24994185)
chr5 (380-489)||(37995639-37995748)
chr5 (380-489)||(30588047-30588152)
chr5 (380-506)||(13843687-13843812)
chr5 (380-506)||(38131754-38131879)
chr5 (380-488)||(27760065-27760173)
chr5 (380-489)||(24918154-24918260)
chr5 (380-506)||(1028082-1028207)
chr5 (392-489)||(84039-84136)
chr5 (380-489)||(17016098-17016207)
chr5 (388-488)||(4465191-4465291)
chr5 (392-488)||(32395320-32395416)
chr5 (430-506)||(40168848-40168923)
chr5 (380-507)||(13844003-13844129)
chr5 (432-489)||(18541764-18541821)
chr5 (392-489)||(22196331-22196428)
chr5 (430-507)||(28156278-28156354)
chr5 (392-489)||(29396348-29396445)
chr5 (423-495)||(1892089-1892161)
chr5 (430-506)||(13413624-13413699)
chr5 (430-506)||(34457136-34457211)
chr5 (430-489)||(48109-48168)
chr5 (380-455)||(4464921-4464996)
chr5 (430-489)||(35526993-35527052)
chr5 (430-489)||(37781849-37781908)
chr5 (435-489)||(395037-395091)
chr5 (423-489)||(2716579-2716645)
chr5 (432-490)||(2908566-2908624)
chr5 (432-506)||(2908758-2908831)
chr5 (423-493)||(20720551-20720621)
chr5 (432-489)||(48316-48373)
chr5 (432-489)||(2716385-2716442)
chr5 (392-489)||(22196558-22196655)
chr5 (380-489)||(28010121-28010230)
chr5 (430-506)||(3762946-3763021)
chr5 (430-506)||(24125102-24125177)
chr5 (432-492)||(24792124-24792184)
chr5 (434-506)||(27760419-27760490)
chr5 (430-506)||(28156070-28156145)
chr5 (430-506)||(34457343-34457418)
[»] chr7 (51 HSPs)
chr7 (345-506)||(48116284-48116445)
chr7 (308-506)||(12578449-12578649)
chr7 (380-489)||(37272050-37272159)
chr7 (345-489)||(12525088-12525232)
chr7 (380-489)||(43288254-43288363)
chr7 (389-493)||(36092600-36092704)
chr7 (308-489)||(12518175-12518359)
chr7 (380-489)||(6959971-6960080)
chr7 (380-489)||(7135248-7135357)
chr7 (392-489)||(43384285-43384382)
chr7 (387-507)||(1661179-1661298)
chr7 (431-506)||(8585132-8585206)
chr7 (380-507)||(28910022-28910148)
chr7 (380-489)||(257272-257381)
chr7 (430-495)||(480164-480229)
chr7 (345-467)||(14691031-14691149)
chr7 (388-489)||(37530928-37531029)
chr7 (387-506)||(1663593-1663712)
chr7 (392-492)||(34748780-34748880)
chr7 (308-401)||(12494464-12494550)
chr7 (352-489)||(12524499-12524636)
chr7 (392-489)||(27585258-27585355)
chr7 (392-489)||(47346099-47346196)
chr7 (392-489)||(47346328-47346425)
chr7 (398-506)||(6813067-6813174)
chr7 (380-488)||(40121624-40121732)
chr7 (430-493)||(9378833-9378896)
chr7 (392-491)||(19843709-19843808)
chr7 (430-493)||(31374805-31374868)
chr7 (387-485)||(41670580-41670678)
chr7 (430-507)||(6783078-6783154)
chr7 (398-507)||(35866626-35866735)
chr7 (392-489)||(36495891-36495988)
chr7 (392-453)||(37755979-37756040)
chr7 (392-453)||(37756205-37756266)
chr7 (392-453)||(37761953-37762014)
chr7 (380-489)||(43288522-43288631)
chr7 (359-455)||(12524804-12524900)
chr7 (380-488)||(43167899-43168007)
chr7 (430-489)||(14991514-14991573)
chr7 (430-489)||(15421125-15421184)
chr7 (423-506)||(23396847-23396929)
chr7 (390-489)||(36092397-36092496)
chr7 (398-485)||(36237810-36237897)
chr7 (430-489)||(40703416-40703475)
chr7 (432-506)||(23821665-23821738)
chr7 (430-496)||(44760505-44760571)
chr7 (392-489)||(33909139-33909236)
chr7 (392-489)||(36270475-36270572)
chr7 (392-453)||(39550019-39550080)
chr7 (398-454)||(48114005-48114061)
[»] scaffold0989 (1 HSPs)
scaffold0989 (430-506)||(2936-3011)
[»] scaffold0054 (1 HSPs)
scaffold0054 (430-489)||(21268-21327)
[»] scaffold0003 (1 HSPs)
scaffold0003 (430-492)||(43760-43822)
[»] scaffold1138 (1 HSPs)
scaffold1138 (423-492)||(1875-1944)
[»] scaffold0166 (1 HSPs)
scaffold0166 (432-492)||(34507-34567)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 4e-80; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 307 - 506
Target Start/End: Original strand, 41176623 - 41176822
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41176623 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgagggggtggatttagtcccaca 41176722  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||| | ||||||||| ||||||||| ||| ||||||||||||    
T  41176723 tcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 41176822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 307 - 507
Target Start/End: Original strand, 21498104 - 21498304
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21498104 tgagggggtgggttggtaattccaccttaaaattgcgattcgatctgccccaagttgccttatgttggcttgtctttgagggggtggatttagtcccaca 21498203  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| ||| ||||||||||||    
T  21498204 tcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 21498303  T
Q  507 g 507  Q
    |    
T  21498304 g 21498304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 307 - 506
Target Start/End: Complemental strand, 21497870 - 21497671
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21497870 tgagggggtgggttggtaattccaccttaaaattgcgattcgatctgccccaagttgccttatgttggcttgtctttgagggggtggatttagtcccaca 21497771  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| ||| ||||||||||||    
T  21497770 tcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 21497671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 307 - 506
Target Start/End: Original strand, 38908034 - 38908233
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38908034 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgagggggtggatttagtcccaca 38908133  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| | |||| |||  | ||||||||| ||||||||  ||| ||||||||||||    
T  38908134 tcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttaaaagacggttttgtaaggatgagttatgccccaaaatttcaaca 38908233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 307 - 479
Target Start/End: Original strand, 7193587 - 7193759
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  7193587 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgcccctagtggccttatgttggcttgtctttgagggggtggatttagtcccaca 7193686  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||||| || |||||||||||  |||| |||||| |||| |||||||| | ||||||||  | |||||||||    
T  7193687 tcggttagataggaagcttgatcggagtatataaaaaggaggcactcctcaccttacaagtcggttttgtaag 7193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 348 - 489
Target Start/End: Complemental strand, 27048554 - 27048413
Alignment:
Q  348 gatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaa 447  Q
    |||||||| | ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||     
T  27048554 gatctgcctccagttgccttctgtcggcttgtctttgagggggtggatttagtcccacatcggttagataggaagcttgataagagtttataaagaggag 27048455  T
Q  448 gcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||| | ||||||||| | ||||||||| |||||||||    
T  27048454 gcactcctcaccttacaagccggttttgtaaggatgagttag 27048413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 345 - 489
Target Start/End: Complemental strand, 34206138 - 34205998
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagt-ttataaaga 443  Q
    ||||||||||||| ||||||||| |||||||||     || |||||||||||||||||||||||||||| ||  ||  |||||| ||||| |||||||||    
T  34206138 tgcgatctgcccctagttgccttgtgttggctt-----tgagggggtggatttagtcccacatcggttagataagactcttgataagagtcttataaaga 34206044  T
Q  444 ggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||| |||||||| | ||||||||||| ||||||||| |||||||||    
T  34206043 ggaggcactcctcaccttacaagctggttttgtaaggatgagttag 34205998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 507
Target Start/End: Complemental strand, 27048276 - 27048125
Alignment:
Q  360 gttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggtta-----aattggaagcttgattagagtttataaagaggaagcactcc 454  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||| |||||      || ||| ||||||| | ||||||||||||||| |||||||    
T  27048276 gttgccttgtgttggcttgtctttatgggggtggatttagtcccacattggttatataggataggacgcttgataaaagtttataaagaggaggcactcc 27048177  T
Q  455 ttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    | | ||| ||||| | ||||||||| ||||||||| |||  ||||||||||||    
T  27048176 tcaccttgcaagccggttttgtaaggatgagttaggccc-caaatttcaacag 27048125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 51469471 - 51469596
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | || ||||||    
T  51469471 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttgtgtaag 51469570  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  51469571 gatgagttaggccc-caaatttcaaca 51469596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 53740172 - 53740297
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  53740172 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 53740271  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  53740272 gatgagttaggccc-caaatttcaaca 53740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 15665143 - 15665252
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || |||  |||||  |||||||||| |||||| |||||||| | ||||||||| | |||||||||    
T  15665143 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttatatagaggaggcactcctcaccttacaagccggttttgtaag 15665242  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  15665243 gatgagttag 15665252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 507
Target Start/End: Complemental strand, 29669470 - 29669351
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    |||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||    
T  29669470 ggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 29669371  T
Q  487 tagacccaaaaatttcaacag 507  Q
    ||| |||  ||||||||||||    
T  29669370 taggccc-caaatttcaacag 29669351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 35269051 - 35269110
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  35269051 agagtttataaagaggaagcactcctcaccttacaagctgattttgtaaggatgagttag 35269110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 991194 - 991319
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || ||   |  |||||  ||||||||||| ||||| |||||||| | ||||||||| | |||||||||    
T  991194 ctttgagggggtggatttagtcccacatcggatagataacactcttgagaagagtttataatgaggaggcactcctcaccttacaagccggttttgtaag 991293  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     |||||||||||||  |||||||||||    
T  991294 gatgagttagaccc-caaatttcaaca 991319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 36558580 - 36558455
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || ||  ||   ||||  ||||||||||||||| |||||||||| | ||||||||| | |||||||||    
T  36558580 ctttgagggggtggatttagtcccacatcggatagatatgacttttgagaagagtttataaagagtaagcactcctcaccttacaagccggttttgtaag 36558481  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  36558480 gatgagttaggccc-caaatttcaaca 36558455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 45427366 - 45427241
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || |||  |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  45427366 ctttgagggggtggatttagtcccacatcagatatattttactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 45427267  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  45427266 gatgagttaggccc-caaatttcaaca 45427241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 56509599 - 56509708
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||| ||||||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||| |    
T  56509599 ctttgagggggtggatttagtcctacatcggatagataggacccttgagaagagtttataaagaggaggcactcctcaacttacaagccggttttgtacg 56509698  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  56509699 gatgagttag 56509708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 28085700 - 28085792
Alignment:
Q  396 ttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||||||||| |||||| || ||| ||||||| ||||||||||||||||| |||||||| | ||||||||| | ||||||||| | ||||||    
T  28085700 ttagtcccacaacggttagataggacgcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggacgagtta 28085792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 51564868 - 51564936
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggtta 413  Q
    |||||||| |||| ||||||||| ||||||| |||||||| |||||||||||||||||||||| |||||    
T  51564868 tgcgatcttcccctagttgccttgtgttggcctgtctttgagggggtggatttagtcccacattggtta 51564936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 506
Target Start/End: Complemental strand, 29669785 - 29669667
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    |||||||||||||||||||||| | || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||    
T  29669785 ggggtggatttagtcccacatcagatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 29669686  T
Q  487 tagacccaaaaatttcaaca 506  Q
    || ||||  |||||||||||    
T  29669685 taaaccc-caaatttcaaca 29669667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 34206370 - 34206260
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagt-ttataaagaggaagcactccttatcttacaagctgattttgtaa 478  Q
    ||||| |||||||||||||||| ||||||||||| ||  ||  |||||| ||||| |||||||||||| |||||||| | ||||||||| | ||| ||||    
T  34206370 ctttgagggggtggatttagtctcacatcggttagataagactcttgataagagtcttataaagaggaggcactcctcaccttacaagccggtttcgtaa 34206271  T
Q  479 gtatgagttag 489  Q
    | |||||||||    
T  34206270 ggatgagttag 34206260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 52214605 - 52214730
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||| |||||||||||| || || ||   |  |||||| ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  52214605 ctttgagggggtggaattagtcccacattgggtagataatactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 52214704  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  52214705 gatgagttaggccc-caaatttcaaca 52214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 45427050 - 45426941
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||| |||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||  | |||||||||    
T  45427050 ctttgagggggtggatttagccccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaag 45426951  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  45426950 gatgagttag 45426941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 381 - 506
Target Start/End: Original strand, 51470474 - 51470598
Alignment:
Q  381 tttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagt 480  Q
    |||| ||||| ||||||||||||||||||| || || |||  |||||  ||||||||||| ||||| || ||||| | ||||||||| | |||||||||     
T  51470474 tttgagggggaggatttagtcccacatcggatagataggactcttgagaagagtttataaggaggaggctctcctcaccttacaagccggttttgtaagg 51470573  T
Q  481 atgagttagacccaaaaatttcaaca 506  Q
    ||||||||| |||  |||||||||||    
T  51470574 atgagttaggccc-caaatttcaaca 51470598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 492
Target Start/End: Complemental strand, 20545765 - 20545661
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtt 487  Q
    |||||||||||||| ||||||||||| ||||||  |||||| | |||||||||| ||||  ||||||| |||||||||||   | ||||||| || ||||    
T  20545765 gggtggatttagtctcacatcggttagattggactcttgataatagtttataaataggacacactcctcatcttacaagccagtattgtaaggataagtt 20545666  T
Q  488 agacc 492  Q
    |||||    
T  20545665 agacc 20545661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 476
Target Start/End: Original strand, 22867074 - 22867170
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgt 476  Q
    ||||| |||||||||||||||||||| |||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||    
T  22867074 ctttgagggggtggatttagtcccacgtcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgt 22867170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 489
Target Start/End: Original strand, 43972346 - 43972454
Alignment:
Q  381 tttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagt 480  Q
    |||| ||||||| ||||||||||||||||| || || |||  |||||  | |||| |||||||||| |||||||| | ||||||||| | |||||||||     
T  43972346 tttgagggggtgaatttagtcccacatcggatagataggactcttgagaaaagttgataaagaggaggcactcctcaccttacaagccggttttgtaagg 43972445  T
Q  481 atgagttag 489  Q
    |||||||||    
T  43972446 atgagttag 43972454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 50858318 - 50858440
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || || | |  |||||  ||||||||||||||||| |||||||   |||||||||| | |||||||||    
T  50858318 ctttgagggggtggatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcactcc---tcttacaagccggttttgtaag 50858414  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  50858415 gatgagttaggccc-caaatttcaaca 50858440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 990537 - 990662
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||| ||||||||||||||||| || ||   |  |||||  ||||||||||||||||| |||||||| | ||||||||  | |||||||||    
T  990537 ctttgagggggtgaatttagtcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaag 990636  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  990637 gatgagttaggccc-caaatttcaaca 990662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 13254373 - 13254498
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| || || || |||   ||||  |||||||||||||| || |||||||| | ||||||| | | |||||||||    
T  13254373 ctttgagggggtggatttagtcccacattggatagataggactattgagaagagtttataaagatgaggcactcctcaccttacaacccggttttgtaag 13254472  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  13254473 catgagttaggccc-caaatttcaaca 13254498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 50858002 - 50858127
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||| |||||||||| || | |||||| | ||||||||| | |||||||||    
T  50858002 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagattttataaagaagaggtactcctcaccttacaagccggttttgtaag 50858101  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  50858102 gatgagttaggccc-caaatttcaaca 50858127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 53739856 - 53739981
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||| ||||| || || | |  |||||  ||||||||||||||||| | |||||| | ||||||||| | |||||||||    
T  53739856 ctttgagggggtggatttagtcccatatcggatagatagtactcttgagaagagtttataaagaggaggaactcctcagcttacaagccggttttgtaag 53739955  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     |||| |||| |||  |||||||||||    
T  53739956 gatgatttaggccc-caaatttcaaca 53739981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 11290171 - 11290268
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| ||| |||| | | ||||||| | ||||||| | |||||||||    
T  11290171 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagttag 11290268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 430 - 507
Target Start/End: Original strand, 29113489 - 29113565
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    ||||||||||||||||| ||| |||| | ||||||||||| ||||||||| ||||||||| |||  ||||||||||||    
T  29113489 agagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggccc-caaatttcaacag 29113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 46529025 - 46528928
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||| |||||||| || ||||||  |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  46529025 ggatttagtctcacatcggatagattggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 46528928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 496
Target Start/End: Complemental strand, 52827303 - 52827230
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaa 496  Q
    |||||| ||||||||||||||||| |||||||| | ||||||||| | ||||||||| |||||| || ||||||    
T  52827303 cttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtcaggcccaaa 52827230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 5488375 - 5488466
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||| |||||  ||  |||||  ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  5488375 agtcccacatcggataaataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 5488466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 487
Target Start/End: Original strand, 29734551 - 29734658
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||| ||||||||||||||||| || || |||   ||||  ||||||  ||||||||| |||||||| | ||||||||| | |||||||||    
T  29734551 ctttgagggggtgaatttagtcccacatcggatagataggacttttgagaagagttattaaagaggaggcactcctcaccttacaagccggttttgtaag 29734650  T
Q  480 tatgagtt 487  Q
     |||||||    
T  29734651 gatgagtt 29734658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 25753676 - 25753610
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||| ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  25753676 cttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 25753610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 486
Target Start/End: Complemental strand, 50868115 - 50868021
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| ||| |||| | | ||||||| | ||||||| | ||||||    
T  50868115 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagt 50868021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 33912045 - 33912142
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| |   || |||| | ||||||||| |||||||||    
T  33912045 ggatttagtcccacatcgggtagataggatacttgagaagagtttataaagaggaggcactcctcactgtataagccggttttgtaaggatgagttag 33912142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 467
Target Start/End: Complemental strand, 48843125 - 48843044
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagc 467  Q
    |||||||||||||||||| |||| | || || |||  |||||  ||||||||||||||||| |||||||| | |||||||||    
T  48843125 gggggtggatttagtcccgcatcagatagataggactcttgaaaagagtttataaagaggaggcactcctcaccttacaagc 48843044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 23018510 - 23018585
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  23018510 agagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 23018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 12016747 - 12016688
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  12016747 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 12016688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 12016955 - 12016896
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  12016955 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 12016896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 43943713 - 43943772
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  43943713 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 43943772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 506
Target Start/End: Original strand, 56511537 - 56511619
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    |||||| ||||||||||||||||| |||||||| | ||||  | | ||||||||||| ||||||||| |||  |||||||||||    
T  56511537 cttgataagagtttataaagaggaggcactcctcaccttatgaaccgattttgtaaggatgagttaggccc-caaatttcaaca 56511619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 333
Target Start/End: Complemental strand, 21497930 - 21497900
Alignment:
Q  303 aatatgagggggtgggttggtaattccacct 333  Q
    |||||||||||||||||||||||||||||||    
T  21497930 aatatgagggggtgggttggtaattccacct 21497900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 333
Target Start/End: Original strand, 21498044 - 21498074
Alignment:
Q  303 aatatgagggggtgggttggtaattccacct 333  Q
    |||||||||||||||||||||||||||||||    
T  21498044 aatatgagggggtgggttggtaattccacct 21498074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 333
Target Start/End: Original strand, 38907974 - 38908004
Alignment:
Q  303 aatatgagggggtgggttggtaattccacct 333  Q
    |||||||||||||||||||||||||||||||    
T  38907974 aatatgagggggtgggttggtaattccacct 38908004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 333
Target Start/End: Original strand, 41176563 - 41176593
Alignment:
Q  303 aatatgagggggtgggttggtaattccacct 333  Q
    |||||||||||||||||||||||||||||||    
T  41176563 aatatgagggggtgggttggtaattccacct 41176593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 495
Target Start/End: Complemental strand, 12879555 - 12879458
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaa 495  Q
    |||| |||||||| ||||| ||||  ||||| ||| ||||||||||| |   | |||| ||| ||||||| ||||||||||| || ||||||||||||    
T  12879555 agtctcacatcggataaataggaatattgataagattttataaagagtagataatcctcatcatacaagccgattttgtaagaataagttagacccaa 12879458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 3055791 - 3055879
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    |||||||||| || || || |||  |||||| ||||||||||||||||| |||||||| | |||| |||  | ||||||||| ||||||    
T  3055791 agtcccacattggatagataggactcttgatgagagtttataaagaggatgcactcctcaccttaaaagtcggttttgtaaggatgagt 3055879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 28395217 - 28395292
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  28395217 agagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 28395292  T

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Target: chr2 (Bit Score: 152; Significance: 4e-80; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 307 - 506
Target Start/End: Complemental strand, 25286447 - 25286248
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25286447 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 25286348  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||||||| | ||||||||| | ||||||||| ||||||||| ||| ||||||||||||    
T  25286347 tcggttagattggaagcttgatcagagtttataaagaggaaacactcctcaccttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 25286248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 307 - 489
Target Start/End: Original strand, 901840 - 902022
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||    
T  901840 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgcccctagttgccttatgttggcttgtctttgagagggtggatttagtgccaca 901939  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||| || ||||||||||| ||||||||| |||||||||||||||| | ||||||||| | ||||||||| |||||||||    
T  901940 tcggttagataggaagcttgatcagagtttatgaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttag 902022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 345 - 506
Target Start/End: Original strand, 30160282 - 30160443
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||    
T  30160282 tgcgatctgccccaagtcgccttatgttggcttacctttgagggggtggatttagtcccacagcggttagattggaagtttgatcagagtttataaagag 30160381  T
Q  445 gaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    || |||||||||| ||||||||| | ||||||||| ||||||||| ||| ||||||||||||    
T  30160382 gaggcactccttaccttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 30160443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 306 - 488
Target Start/End: Complemental strand, 15061450 - 15061271
Alignment:
Q  306 atgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccac 405  Q
    ||||||||| | ||||||||  |||||||||  ||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15061450 atgagggggggtgttggtaaa-ccaccttaa--ttgcgatgtgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccac 15061354  T
Q  406 atcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||||||| || ||||||||||| | ||||||||||||||| |||||||| | ||||||||||| ||||||||| ||||||||    
T  15061353 atcggttagataggaagcttgatcaaagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagtta 15061271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 307 - 489
Target Start/End: Original strand, 30156132 - 30156307
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    |||||||||||||| ||||||||| |||||  |||||||     ||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  30156132 tgagggggtgggttagtaattccatcttaa--ttgtgat-----ctgacccgagttgccttatgttggcttgcctttgagggggtggatttagtcccaca 30156224  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||| |||||||| ||||| ||||||||||||||||| |||||||| | ||||||||| | ||||||||| || ||||||    
T  30156225 tcggttatattggaagtttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggataagttag 30156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 29923264 - 29923354
Alignment:
Q  354 ccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||| |||||| |||| || ||| ||||||| |||||||||||||||    
T  29923264 cccctagttgccttgtgttggcttgtctttgagggggtggatttagtctcacatctgttagataggacgcttgataagagtttataaagag 29923354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 488
Target Start/End: Complemental strand, 2333500 - 2333364
Alignment:
Q  352 tgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcac 451  Q
    |||||| ||||||||||||||||||||| |||| ||||||||| ||| |||||||| |||||||| | ||||||||| | |||||||||| || |  |||    
T  2333500 tgcccctagttgccttatgttggcttgtatttgagggggtggaattaatcccacattggttaaatagaaagcttgatcaaagtttataaaaagaagacac 2333401  T
Q  452 tccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||| | |||||||||   |||||||||  |||||||    
T  2333400 tcctcaccttacaagccagttttgtaaggttgagtta 2333364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 497
Target Start/End: Original strand, 11969048 - 11969159
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||||||||||||||||||| |||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| |||||    
T  11969048 gggggtggatttagtcccacgtcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgag 11969147  T
Q  486 ttagacccaaaa 497  Q
    |||| |||||||    
T  11969148 ttaggcccaaaa 11969159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 3976585 - 3976476
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || ||   |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  3976585 ctttgagggggtggatttagtcccacatcggatagataatattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 3976486  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  3976485 gatgagttag 3976476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 423 - 507
Target Start/End: Complemental strand, 10849562 - 10849478
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    |||||| ||||||||||||||||| |||||||| | |||||||| || ||||||||| ||||||||| ||| ||| |||||||||    
T  10849562 cttgataagagtttataaagaggaggcactcctcaccttacaagttggttttgtaaggatgagttaggccccaaattttcaacag 10849478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 489
Target Start/End: Complemental strand, 3977111 - 3977008
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| |  |||||||| | ||||||||| |||||    
T  3977111 gggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaaattacaagccggttttgtaaggatgag 3977012  T
Q  486 ttag 489  Q
    ||||    
T  3977011 ttag 3977008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 422 - 493
Target Start/End: Original strand, 10429771 - 10429842
Alignment:
Q  422 gcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    ||||||| |||||||||||||||||  ||||||| ||||||||||| | ||||||||| |||||||||||||    
T  10429771 gcttgataagagtttataaagaggagacactcctcatcttacaagccggttttgtaaggatgagttagaccc 10429842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 487
Target Start/End: Complemental strand, 21213999 - 21213892
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| || || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  21213999 ctttgagggggtggatttagtcccacattggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 21213900  T
Q  480 tatgagtt 487  Q
     |||||||    
T  21213899 gatgagtt 21213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 6183480 - 6183355
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||| ||||||||||| || || | |  |||||  |||||||||||||||||  |||| || | ||||||||| | |||||||||    
T  6183480 ctttgagggggtggatttaatcccacatcggatagatagtactcttgagaagagtttataaagaggagacacttctcaccttacaagccggttttgtaag 6183381  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     |||||||||||||  |||||||||||    
T  6183380 gatgagttagaccc-caaatttcaaca 6183355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 10542134 - 10542068
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||| ||||||||| |||||||||    
T  10542134 cttgataagagtttataaagaggagacactcctcatcttacaagctggttttgtaaggatgagttag 10542068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 21214315 - 21214190
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||  | || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  21214315 ctttgagggggtggatttagtcccacattagatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 21214216  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  21214215 gatgagttaggccc-caaatttcaaca 21214190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 43195774 - 43195899
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||| |||||||||||||||| | || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  43195774 ctttgagggggtagatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 43195873  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  43195874 gatgagttaggccc-caaatttcaaca 43195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 392 - 492
Target Start/End: Complemental strand, 10862160 - 10862060
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagac 491  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||| | | | ||||||| | ||||||||| |||||||||||    
T  10862160 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcatcaccgtacaagccggttttgtaaggatgagttagac 10862061  T
Q  492 c 492  Q
    |    
T  10862060 c 10862060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 507
Target Start/End: Complemental strand, 18901978 - 18901852
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || ||  ||  |||||  ||||||||||||||||| |||||| | | |||||||||   |||||||||    
T  18901978 ctttgagggggtggatttagtcccacatcggatagataagactcttgaaaagagtttataaagaggaggcactcttcaccttacaagcctgttttgtaag 18901879  T
Q  480 tatgagttagacccaaaaatttcaacag 507  Q
     ||||| ||| |||  ||||||||||||    
T  18901878 aatgagataggccc-caaatttcaacag 18901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 23054316 - 23054441
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || ||   |  |||||  ||||||||||||||||| |||||||| | ||||||||  | |||||||||    
T  23054316 ctttgagggggtggatttagtcccacatcagatagatataactcttgagaagagtttataaagaggaggcactcctcaccttacaagacggttttgtaag 23054415  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  23054416 gatgagttaggccc-caaatttcaaca 23054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 15962259 - 15962162
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||| |||||  | ||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  15962259 ggatttagtcccacatcggatagataggaatcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 15962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 477
Target Start/End: Original strand, 17509099 - 17509196
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgta 477  Q
    ||||| |||||||||||||| |||||||| | || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||||| |||||||    
T  17509099 ctttgagggggtggatttagccccacatcagatagatagcacccttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgta 17509196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 43169232 - 43169341
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||| |||||   |||||||||    
T  43169232 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcacctttcaagccagttttgtaag 43169331  T
Q  480 tatgagttag 489  Q
     | |||||||    
T  43169332 gaagagttag 43169341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 42768398 - 42768323
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  42768398 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 42768323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 386 - 489
Target Start/End: Original strand, 25441692 - 25441795
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||| |||||||||||||||||| | || || | |  |||||  ||||||||||||||||  |||||||| | ||||||||| | ||||||||| |||||    
T  25441692 ggggttggatttagtcccacatcagatagatagtactcttgagaagagtttataaagagggggcactcctcaccttacaagccggttttgtaaggatgag 25441791  T
Q  486 ttag 489  Q
    ||||    
T  25441792 ttag 25441795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 496
Target Start/End: Complemental strand, 27545180 - 27545114
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaa 496  Q
    ||||||||||||||||| ||| |||| | ||||||| | | ||||||||| ||||||||||||||||    
T  27545180 agagtttataaagaggaggcaatcctcaccttacaaaccggttttgtaaggatgagttagacccaaa 27545114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 44266372 - 44266310
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||||||||||||||  ||||| | ||| ||||||||||||||||| | ||||||||||||    
T  44266372 agagtttataaagaggagacactcatcatcatacaagctgattttgtatggatgagttagacc 44266310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 477
Target Start/End: Complemental strand, 33532838 - 33532753
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgta 477  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | | ||||||| | |||||||    
T  33532838 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgta 33532753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 39420699 - 39420796
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||||  ||||  ||||||||||||||||| |||||||| |   ||||||| | ||||||| | |||||||||    
T  39420699 ggatttagtcccacatcggatagataggaattttgagaagagtttataaagaggaggcactcctcacagtacaagccggttttgtacggatgagttag 39420796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 384
Target Start/End: Original strand, 10429729 - 10429768
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttg 384  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  10429729 tgcgatctgcccctagttgccttgtgttggcttgtctttg 10429768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 20999053 - 20998994
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  20999053 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 20998994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 455
Target Start/End: Complemental strand, 30166193 - 30166118
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  |||||||||||||| || ||||||||    
T  30166193 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaagaggcactcct 30166118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 488
Target Start/End: Complemental strand, 883665 - 883607
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||    
T  883665 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 883607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 333
Target Start/End: Complemental strand, 25286507 - 25286477
Alignment:
Q  303 aatatgagggggtgggttggtaattccacct 333  Q
    |||||||||||||||||||||||||||||||    
T  25286507 aatatgagggggtgggttggtaattccacct 25286477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 488
Target Start/End: Original strand, 31761371 - 31761429
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||||||||| |||||| ||| |||| | ||||||||| ||||||||||| ||||||||    
T  31761371 agagtttatatagaggaggcaatcctcaccttacaagccgattttgtaaggatgagtta 31761429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 38760388 - 38760322
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||| ||||||||||||||||| |||||| | | ||||||||| | ||||||||  |||||||||    
T  38760388 cttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaacgatgagttag 38760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 489
Target Start/End: Complemental strand, 39596805 - 39596711
Alignment:
Q  395 tttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||||||||| || || | |  |||||| ||||||||||||||||| ||||||||   ||||||| | | |||||| || |||||||||    
T  39596805 tttagtcccacatcggctatatagaactcttgataagagtttataaagaggaggcactcctcgccttacaatccggttttgtgaggatgagttag 39596711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 11349895 - 11349798
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||   |||||  ||||||||||||||||| |||||||| | | || ||||  |||||||| | |||||||||    
T  11349895 ggatttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtaaaagccaattttgtatggatgagttag 11349798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 15961902 - 15961805
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||| |||||  |   ||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  15961902 ggatttagtcccacatcggatagataggaatcttgagaatcttttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 15961805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 28193437 - 28193340
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||| |||||||| || || |||  |||||  |||||||||||| |||| |||||||| | | ||||||| |||||| |||  |||||||||    
T  28193437 ggatttagtctcacatcggatagataggattcttgagaagagtttataaataggaggcactcctcaccgtacaagccgattttttaaagatgagttag 28193340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 884097 - 884173
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| | |||||||||  |||||||| |||  |||||||||||    
T  884097 agagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggttgagttaggcccccaaatttcaaca 884173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 495
Target Start/End: Complemental strand, 11967157 - 11967121
Alignment:
Q  459 cttacaagctgattttgtaagtatgagttagacccaa 495  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  11967157 cttacaagctggttttgtaagaatgagttagacccaa 11967121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 19860077 - 19860153
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||  | ||||||||| | ||||||||| |||| |||| |||  |||||||||||    
T  19860077 agagtttataaagaggaggcaatccacaccttacaagccggttttgtaaggatgatttaggcccccaaatttcaaca 19860153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 496
Target Start/End: Original strand, 26847426 - 26847474
Alignment:
Q  448 gcactccttatcttacaagctgattttgtaagtatgagttagacccaaa 496  Q
    |||||| ||| | ||||||||| ||||||||| ||||||||||||||||    
T  26847426 gcactctttaccatacaagctggttttgtaaggatgagttagacccaaa 26847474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 492
Target Start/End: Complemental strand, 28193677 - 28193577
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagac 491  Q
    ||||||||||||||||| | || || |||  |||||  ||| ||||||||||||| |||||||| | | ||||||    ||||||||| |||||||||||    
T  28193677 ggatttagtcccacatcagatagataggattcttgagaagattttataaagaggaggcactcctcaccgtacaagtcagttttgtaaggatgagttagac 28193578  T
Q  492 c 492  Q
    |    
T  28193577 c 28193577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 1e-73; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 307 - 467
Target Start/End: Original strand, 40367492 - 40367652
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40367492 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 40367591  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagc 467  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  40367592 tcggttaaattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagc 40367652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 307 - 489
Target Start/End: Complemental strand, 11149610 - 11149428
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  11149610 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgtcttatgttggcttgtctttgagggggtggatttagtcccaca 11149511  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||| | ||||||||| |||||||||    
T  11149510 tcggttacattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttag 11149428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 303 - 449
Target Start/End: Complemental strand, 463341 - 463195
Alignment:
Q  303 aatatgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcc 402  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  463341 aatatgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgagggggtggatttagtcc 463242  T
Q  403 cacatcggttaaattggaagcttgattagagtttataaagaggaagc 449  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  463241 cacatcggttagattggaagcttgatcagagtttataaagaggaagc 463195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 307 - 496
Target Start/End: Complemental strand, 2104440 - 2104258
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    |||||||||||||||||||||||| |||||        ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  2104440 tgagggggtgggttggtaattccatcttaat-------tgcgatctgccccgagttgccttatgttggcttgtctttgagggggtggatttagtcccaca 2104348  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaa 496  Q
    ||||||| || ||||||||||| ||||||| ||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| ||||||    
T  2104347 tcggttagataggaagcttgatcagagtttgtaaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcccaaa 2104258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 307 - 506
Target Start/End: Complemental strand, 21638446 - 21638255
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    |||||||||| ||||||||| |||||||||  |||||||     ||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||    
T  21638446 tgagggggtgtgttggtaatcccaccttaa--ttgtgat-----ctgcccctagttgccttatgttggcttgtctttgagagggtggatttagtcccgca 21638354  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| || ||||||||||| |||||||||||||||||  ||||||| | |||||||| || ||||||||| ||||||||| |||  |||||||||||    
T  21638353 tcggttagataggaagcttgatcagagtttataaagaggagacactcctcaccttacaagatggttttgtaaggatgagttaggccc-caaatttcaaca 21638255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 386 - 507
Target Start/End: Complemental strand, 463191 - 463070
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||| | ||||||||| |||||    
T  463191 gggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgag 463092  T
Q  486 ttagacccaaaaatttcaacag 507  Q
    |||| ||| |||||||||||||    
T  463091 ttaggccccaaaatttcaacag 463070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 345 - 467
Target Start/End: Original strand, 482636 - 482759
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggg-gtggatttagtcccacatcggttaaattggaagcttgattagagtttataaaga 443  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| | || ||||||||||| ||||||||||||||    
T  482636 tgcgatctgcccctagttgccttatgttggcttgtctttgaggggggtggatttagtcccacatcggtcagataggaagcttgatcagagtttataaaga 482735  T
Q  444 ggaagcactccttatcttacaagc 467  Q
    ||| ||||||||  ||||||||||    
T  482736 ggaggcactcctcctcttacaagc 482759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 40367835 - 40367921
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtgg 393  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40367835 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtgg 40367921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 19481541 - 19481381
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||||| ||||| ||| |||||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||    
T  19481541 tgcgatctgcccctagttgtcttgtgttggcttgtctttgagagggtggatttagtcccacaacggttagataggaagcttgatcagagtttataaagag 19481442  T
Q  445 gaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
     | |||||||  | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  19481441 taggcactccaaaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 19481381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 446
Target Start/End: Original strand, 19481274 - 19481375
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||    
T  19481274 tgcgatctgcccctagttgccttgtgttggcttgtctttgagggggtggatttagtcccacatcagttagattagaagcttgatcagagtttataaagag 19481373  T
Q  445 ga 446  Q
    ||    
T  19481374 ga 19481375  T

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Target: chr1; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 349 - 493
Target Start/End: Original strand, 40664169 - 40664313
Alignment:
Q  349 atctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaag 448  Q
    ||||||||| ||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||| || |||  |||||| ||||||||||||||||| |    
T  40664169 atctgcccctagttgccttgtgttggcttgactttgagggggtggatttagtctcacatcggttagataggactcttgataagagtttataaagaggagg 40664268  T
Q  449 cactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    |||||||   ||||||||| | ||||||||| ||| |||||||||    
T  40664269 cactcctcgccttacaagccggttttgtaaggatgtgttagaccc 40664313  T

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Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 36314834 - 36314727
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    ||||||||||||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||| |||||||||| || ||| || |||||||     
T  36314834 atgggaaccaaaacaaggtgaattgaacatcaaaaaacgcgggaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattcca 36314735  T
Q  148 gcgaatgt 155  Q
    | ||||||    
T  36314734 gtgaatgt 36314727  T

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Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 348 - 441
Target Start/End: Original strand, 15985247 - 15985340
Alignment:
Q  348 gatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaa 441  Q
    ||||| |||| |||||||||||||||||||||||| |  |||||||||||||||||||||| |||| ||  |||||||||||||||||||||||    
T  15985247 gatcttcccctagttgccttatgttggcttgtcttcgaaggggtggatttagtcccacatctgttagataagaagcttgattagagtttataaa 15985340  T

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Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 492
Target Start/End: Original strand, 38739869 - 38740001
Alignment:
Q  359 agttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttat 458  Q
    |||||||||||||||||||||||||| ||| |||||||||||| |||||| |||| || ||||| ||||| ||||||||| ||||||  |||||||| |     
T  38739869 agttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagataggaagattgatcagagtttatgaagagg-tgcactcctcac 38739967  T
Q  459 cttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||||||  ||||||||||  ||| |||||||    
T  38739968 cttacaagccaattttgtaagggtgaattagacc 38740001  T

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Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 2697445 - 2697320
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  2697445 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 2697346  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     | |||||||||||  |||||||||||    
T  2697345 gacgagttagaccc-caaatttcaaca 2697320  T

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Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 17419777 - 17419902
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  17419777 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 17419876  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     |||||||||||||  |||||||||||    
T  17419877 gatgagttagaccc-caaatttcaaca 17419902  T

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Target: chr1; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 4022239 - 4022114
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | |||||||||   |||||||||    
T  4022239 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaag 4022140  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  4022139 gatgagttaggccc-caaatttcaaca 4022114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 369 - 493
Target Start/End: Complemental strand, 13357042 - 13356917
Alignment:
Q  369 tgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttat-aaagaggaagcactccttatcttacaagc 467  Q
    ||||||||||||| |  |||||||||||||||| ||||||||||| ||  || ||||||| ||||||||| ||| |||| |||||||| | |||||||||    
T  13357042 tgttggcttgtctgtaagggggtggatttagtctcacatcggttagatatgacgcttgataagagtttataaaaaaggaggcactcctaaccttacaagc 13356943  T
Q  468 tgattttgtaagtatgagttagaccc 493  Q
     | ||||||| | |||||||||||||    
T  13356942 cggttttgtaggaatgagttagaccc 13356917  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 8520207 - 8520082
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  |||||||||||||| || |||||||| | ||||||||| | ||||||||     
T  8520207 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaagaggcactcctcaccttacaagccggttttgtaaa 8520108  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     |||||||||||||  |||||||||||    
T  8520107 gatgagttagaccc-caaatttcaaca 8520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 489
Target Start/End: Complemental strand, 19937150 - 19937048
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    |||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||    
T  19937150 ggggtggatttagtcccacatcggatagatagaattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 19937051  T
Q  487 tag 489  Q
    |||    
T  19937050 tag 19937048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 345 - 446
Target Start/End: Complemental strand, 14368907 - 14368807
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    |||||||||| |  ||||||||| |||||||||||||||| |||| |||||||||||   ||||||||| || ||| ||||||| |||||||||||||||    
T  14368907 tgcgatctgctctcagttgccttgtgttggcttgtctttgagggg-tggatttagtcttgcatcggttagataggacgcttgataagagtttataaagag 14368809  T
Q  445 ga 446  Q
    ||    
T  14368808 ga 14368807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 30604562 - 30604465
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||| |||||  | |||||||||||||||  ||||||||||||||||||| | ||||||| | |||||||||    
T  30604562 ggatttagtcccacatcggatagataggaatcttgagaatagtttataaagaggagacactccttatcttacaagccggttttgtatggatgagttag 30604465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 31305701 - 31305810
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  31305701 ctttgagggggtggatttagtcccacatccgatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 31305800  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  31305801 gatgagttag 31305810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 506
Target Start/End: Complemental strand, 33879884 - 33879767
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtt 487  Q
    ||||||||||||||||||||| | || || | |  |||||  |||||||||||||||||  ||||||| | ||||||||||| ||||||||| |||||||    
T  33879884 gggtggatttagtcccacatcagatatatagcactcttgagaagagtttataaagaggagccactcctcaccttacaagctggttttgtaaggatgagtt 33879785  T
Q  488 agacccaaaaatttcaaca 506  Q
    || |||  |||||||||||    
T  33879784 aggccc-caaatttcaaca 33879767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 506
Target Start/End: Original strand, 33964371 - 33964488
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtt 487  Q
    ||||||||||||||||||||| | || || | |  |||||  |||||||||||||||||  ||||||| | ||||||||||| ||||||||| |||||||    
T  33964371 gggtggatttagtcccacatcagatatatagcactcttgagaagagtttataaagaggagccactcctcaccttacaagctggttttgtaaggatgagtt 33964470  T
Q  488 agacccaaaaatttcaaca 506  Q
    || |||  |||||||||||    
T  33964471 aggccc-caaatttcaaca 33964488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 12287850 - 12287947
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  |||| |||||||||||| |||||||| | | ||||||||| ||||||||| |||||||||    
T  12287850 ggatttagtcccacatcggatagataggattcttgaaaagaggttataaagaggaggcactcctcaccgtacaagctggttttgtaaggatgagttag 12287947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 38474285 - 38474382
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||| ||||||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| |||||||||    
T  38474285 ggatttagtcctacatcggatagataggattcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 38474382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 43361821 - 43361758
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    ||||||||||||||||||||| |||| | ||||||||| | ||||||||| |||||||||||||    
T  43361821 agagtttataaagaggaagcaatcctcaccttacaagccggttttgtaaggatgagttagaccc 43361758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 45403480 - 45403539
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| |||||||| | ||||||||||| ||||||||| |||||||||    
T  45403480 agagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttag 45403539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 20735512 - 20735637
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||| ||||||||| | || || | |  |||||  ||| ||||||||||||| |||||||| | ||||||||| | |||||||||    
T  20735512 ctttgagggggtggatttaatcccacatcagatagatagtactcttgagaagaatttataaagaggaggcactcctcaccttacaagccggttttgtaag 20735611  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  20735612 gatgagttaggccc-caaatttcaaca 20735637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 17294980 - 17295077
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  17294980 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 17295077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 489
Target Start/End: Complemental strand, 28509493 - 28509392
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtt 487  Q
    ||||||||||||||||||||||| || || |||  |||||  ||||||||||||||||| ||||||   | | ||||||| | ||||||||| |||||||    
T  28509493 gggtggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactctccaccgtacaagccggttttgtaaggatgagtt 28509394  T
Q  488 ag 489  Q
    ||    
T  28509393 ag 28509392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 29228450 - 29228547
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||| |||||||||| || || |||| |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  29228450 ggatttagacccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 29228547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 489
Target Start/End: Complemental strand, 29383729 - 29383628
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtt 487  Q
    ||||||||||||||||||||||| || ||  ||  |||||  ||||||||||||| ||| |||||||||| | |||||||   ||||||||| |||||||    
T  29383729 gggtggatttagtcccacatcggatagataagatacttgagaagagtttataaagcggaggcactccttaccgtacaagccagttttgtaaggatgagtt 29383630  T
Q  488 ag 489  Q
    ||    
T  29383629 ag 29383628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 36332152 - 36332217
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaa 495  Q
    ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| |||||    
T  36332152 agagtttataaagaggatgcactcctcaccttacaagccggttttgtaaggatgagttaggcccaa 36332217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 43423269 - 43423378
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||| ||||||||||| || ||   |  |||||  ||||||||||||||||| |||||||| | |||||||||   |||||||||    
T  43423269 ctttgagggggtggatttattcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaag 43423368  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  43423369 gatgagttag 43423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 488
Target Start/End: Original strand, 45264653 - 45264760
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||| |||  || || |||  |||||| |||||||||||| |||  |||||||| | ||||||||| | |||||||||    
T  45264653 ctttgagggggtggatttagtcccacgtcgaatagataggactcttgataagagtttataaa-aggcggcactcctcaccttacaagccggttttgtaag 45264751  T
Q  480 tatgagtta 488  Q
     ||||||||    
T  45264752 gatgagtta 45264760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 488
Target Start/End: Original strand, 20735794 - 20735853
Alignment:
Q  429 tagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||    
T  20735794 tagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtta 20735853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 455
Target Start/End: Original strand, 29228677 - 29228740
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||||||    
T  29228677 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcct 29228740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 43361616 - 43361553
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||||||    
T  43361616 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagaccc 43361553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 51722255 - 51722353
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataa-agaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||| |||||| |||||||| | | ||||||| | ||||||||| |||||||||    
T  51722255 ggatttagtcccacatcggatagataggattcttgagaagagtttataagagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttag 51722353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 35024573 - 35024465
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||| ||| |||||||||||| ||||| || |||  |||||| || ||||||||| |||| |||||||| | ||||||||| | |||||||||    
T  35024573 ctttgagggggcggaattagtcccacattggttagataggactcttgataag-gtttataaacaggaggcactcctcaccttacaagccggttttgtaag 35024475  T
Q  480 tatgagttag 489  Q
     ||| |||||    
T  35024474 gatgggttag 35024465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 36332643 - 36332716
Alignment:
Q  423 cttgattagagtttataaagaggaag-cactccttatcttacaagctgattttgtaagtatgagttagacccaa 495  Q
    |||||| ||||||||||||||| ||| ||||||| | |||||| |||| ||||||||| ||||||||| |||||    
T  36332643 cttgataagagtttataaagagtaagacactcctcaccttacacgctggttttgtaaggatgagttaggcccaa 36332716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 45858657 - 45858754
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | | ||||||  | |||| |||| |||||||||    
T  45858657 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagtcggttttataaggatgagttag 45858754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 506
Target Start/End: Original strand, 1233934 - 1234041
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaa 497  Q
    ||||||||||||| || ||  ||  |||||| |||||||||||||||||  ||||||| | || |||||||| |||||| |  |||||||||||||  ||    
T  1233934 agtcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacctcacaagctggttttgtgatgatgagttagaccc-caa 1234032  T
Q  498 atttcaaca 506  Q
    |||||||||    
T  1234033 atttcaaca 1234041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 4187615 - 4187520
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||| ||||||| |||||||| | | ||||||| | ||||||| | ||||||||    
T  4187615 ggatttagtcccacatcggatagataggaatcttgagaagagtttat-aagaggaggcactcctcaccgtacaagccggttttgtatggatgagtta 4187520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 15392144 - 15392219
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| ||||||||||| ||||||||| |||  |||||||||||    
T  15392144 agagtatataaagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttaggccc-caaatttcaaca 15392219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 36314698 - 36314548
Alignment:
Q  159 tctaacaagactgaagagtctttcgctttcaaagttaaagatggaatgtttatgcgatggtacctaaccgagaaggggaggttagtaggtggtgatggag 258  Q
    |||||||||| |||||| |||||||||||  ||||||||||||| | ||||||  ||||| | ||| ||  |||||| | ||||  | |||||| || ||    
T  36314698 tctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatatgatgggagctatcctcgaagggcaagttaacaagtggtgttgaag 36314599  T
Q  259 acaatg---atgttgatattggaaatgcagacatttgttatggatataata 306  Q
    ||||||    ||  || |||||||||||||| || ||||||||||||||||    
T  36314598 acaatgctagtggagaaattggaaatgcagatatatgttatggatataata 36314548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 455
Target Start/End: Complemental strand, 40642882 - 40642815
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||||||||||||||||||||| || || |||  |||||  |||||||||||||||||  |||||||    
T  40642882 gggtggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggagacactcct 40642815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 479
Target Start/End: Original strand, 45443222 - 45443309
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||||||||||||||||| || || |||  |||||  |||||||||||||| || |||||||| | | ||||||| | |||||||||    
T  45443222 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagatgaggcactcctaaccgtacaagccggttttgtaag 45443309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 488
Target Start/End: Complemental strand, 39649148 - 39649090
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||    
T  39649148 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 39649090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 333
Target Start/End: Original strand, 40367432 - 40367462
Alignment:
Q  303 aatatgagggggtgggttggtaattccacct 333  Q
    |||||||||||||||||||||||||||||||    
T  40367432 aatatgagggggtgggttggtaattccacct 40367462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 488
Target Start/End: Complemental strand, 48558385 - 48558327
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||| ||||||||||||||| |||| | ||||||||| | ||||||||| ||||||||    
T  48558385 agagtatataaagaggaagcaatcctcaccttacaagccggttttgtaaggatgagtta 48558327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 18585040 - 18585137
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||| ||||||||||||| | |||||| | | |||||||   ||||||||| |||||||||    
T  18585040 ggatttagtcccacatcggatagataggattcttgagaagattttataaagaggagggactcctcaccgtacaagccagttttgtaaggatgagttag 18585137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 488
Target Start/End: Original strand, 29413175 - 29413240
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||||| |||||||||||||||||| ||||| | ||||||  ||||| ||||||||| ||| ||||    
T  29413175 cttgataagagtttataaagaggaaacactcttcatcttatgagctggttttgtaaggatgggtta 29413240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 479
Target Start/End: Original strand, 36326946 - 36326995
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  36326946 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 36326995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 455
Target Start/End: Complemental strand, 10017399 - 10017367
Alignment:
Q  423 cttgattagagtttataaagaggaagcactcct 455  Q
    |||||| ||||||||||||||||||||||||||    
T  10017399 cttgataagagtttataaagaggaagcactcct 10017367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 29273289 - 29273214
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||| ||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  29273289 agagtttataaaggggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 29273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 1e-70; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 307 - 506
Target Start/End: Complemental strand, 43984503 - 43984305
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  43984503 tgagggggtgggttggtaattccaccttaaaattgtgatgcgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccaca 43984404  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||| | | ||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  43984403 tcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccatacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 43984305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 307 - 426
Target Start/End: Complemental strand, 43984221 - 43984112
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||          ||||||||||| |||||||||||||||||||||    
T  43984221 tgagggggtgggttggtaattccaccttaaaattgtgatgcaatctgcccctagttg----------gcttgtctttgagggggtggatttagtcccaca 43984132  T
Q  407 tcggttaaattggaagcttg 426  Q
    ||||||| ||||||||||||    
T  43984131 tcggttagattggaagcttg 43984112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 19390517 - 19390624
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || ||||||||    
T  19390517 atgggaaccaaaacaaggggaattgaacatcaagaaacgcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggtttattcgagaacattccg 19390616  T
Q  148 gcgaatgt 155  Q
    | ||||||    
T  19390617 gtgaatgt 19390624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 19410714 - 19410821
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | ||||||    
T  19410714 atgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccg 19410813  T
Q  148 gcgaatgt 155  Q
    || |||||    
T  19410814 gccaatgt 19410821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 19457733 - 19457840
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | ||||||    
T  19457733 atgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccg 19457832  T
Q  148 gcgaatgt 155  Q
    || |||||    
T  19457833 gccaatgt 19457840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 19523345 - 19523238
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | ||||||    
T  19523345 atgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccg 19523246  T
Q  148 gcgaatgt 155  Q
    || |||||    
T  19523245 gccaatgt 19523238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 386 - 489
Target Start/End: Original strand, 34248073 - 34248176
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||||||||||||||||||||||||||| || |||  |||||| ||||||||||||||||| |||||||| | ||||||||| | ||||||||| |||||    
T  34248073 gggggtggatttagtcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgag 34248172  T
Q  486 ttag 489  Q
    ||||    
T  34248173 ttag 34248176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 19345103 - 19345201
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaacttaa-agcaatgggatattcaaggacattcc 146  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||| |||||||| |||||| || |||||||    
T  19345103 atgggaaccaaaagaaggtgaattgaacatcaagaaaagcggcatagcgtattggaaaagcggaaaacttaatagcaatggaatattcgagaacattcc 19345201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 34248349 - 34248458
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| ||||| || |||  |||||| ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  34248349 ctttgagggggtggatttagtcccacattggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 34248448  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  34248449 gatgagttag 34248458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 19376552 - 19376658
Alignment:
Q  50 tgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccgg 148  Q
    ||||||||||||||||||||| |||||||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | |||||||    
T  19376552 tgggaaccaaaacaaggtgaactgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccgg 19376651  T
Q  149 cgaatgt 155  Q
    | |||||    
T  19376652 ccaatgt 19376658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 19468773 - 19468667
Alignment:
Q  50 tgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccgg 148  Q
    ||||||||||||||||||||||||| |||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | |||||||    
T  19468773 tgggaaccaaaacaaggtgaattgatcatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccgg 19468674  T
Q  149 cgaatgt 155  Q
     ||||||    
T  19468673 tgaatgt 19468667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 19555694 - 19555588
Alignment:
Q  50 tgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccgg 148  Q
    ||||||||||||||||||||||||| |||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | |||||||    
T  19555694 tgggaaccaaaacaaggtgaattgatcatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccgg 19555595  T
Q  149 cgaatgt 155  Q
     ||||||    
T  19555594 tgaatgt 19555588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 18905846 - 18905971
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  18905846 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 18905945  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  18905946 gatgagttaggccc-caaatttcaaca 18905971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 21085262 - 21085137
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||||| ||||||||     
T  21085262 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaat 21085163  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  21085162 gatgagttaggccc-caaatttcaaca 21085137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 19172998 - 19172901
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaacttaa-agcaatgggatattcaaggacattc 145  Q
    |||||||||||   ||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||| ||||||||  |||||||| ||||||    
T  19172998 atgggaaccaatggaaggtgaattgaacatcaagcaacgcggcaaagtgtattggaaaagcggaaaacttaacagcaatggattattcaagaacattc 19172901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 19504108 - 19504004
Alignment:
Q  155 tgtctctaacaagactgaagagtctttcgctttcaaagttaaagatggaatgtttatgcgatggtacctaaccgagaaggggaggttagtaggtggtgat 254  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||| | ||||   |||||| | ||||||  |||||||||||||||||||  ||||    
T  19504108 tgtctctaacaagaatgaagattctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcgaaggggaggttagtaggtcatgat 19504009  T
Q  255 ggaga 259  Q
    |||||    
T  19504008 ggaga 19504004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 19404683 - 19404754
Alignment:
Q  50 tgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaacttaaa 121  Q
    ||||||||||||||||||||| |||||||||||| | | |||| ||||||||||||||| ||||||||||||    
T  19404683 tgggaaccaaaacaaggtgaactgaacatcaagaaaagaggcaaagtgtattggaaaagcggaaaacttaaa 19404754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 19469710 - 19469603
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    ||||| ||||||| |||| |||||||||||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | ||||||    
T  19469710 atggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccg 19469611  T
Q  148 gcgaatgt 155  Q
    || |||||    
T  19469610 gccaatgt 19469603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 19540634 - 19540527
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    ||||| ||||||| |||| |||||||||||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | ||||||    
T  19540634 atggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccg 19540535  T
Q  148 gcgaatgt 155  Q
    || |||||    
T  19540534 gccaatgt 19540527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 19592064 - 19592171
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattccg 147  Q
    ||||| ||||||| |||| |||||||||||||||| | |||||| ||||||||||||||| ||||||||| ||||||||||  ||||| || | ||||||    
T  19592064 atggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccg 19592163  T
Q  148 gcgaatgt 155  Q
    || |||||    
T  19592164 gccaatgt 19592171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 32931391 - 32931516
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || ||   |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  32931391 ctttgagggggtggatttagtcccacatcggatagatatcattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 32931490  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  32931491 gatgagttaggccc-caaatttcaaca 32931516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 370 - 446
Target Start/End: Original strand, 7622274 - 7622351
Alignment:
Q  370 gttggcttgtctttgcgg-gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagagga 446  Q
    ||||||||||||||| || |||||||||||||||||||||||||| || ||| ||||||| ||||||||| |||||||    
T  7622274 gttggcttgtctttgaggcgggtggatttagtcccacatcggttagataggacgcttgatgagagtttatgaagagga 7622351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 386 - 506
Target Start/End: Original strand, 7621890 - 7622009
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||||||||||||||||||| ||||||| ||  || ||||||| |||||||||| ||||||  |||||||   |||| ||| |||||||||||| |||||    
T  7621890 gggggtggatttagtcccacgtcggttagatatgacgcttgataagagtttatagagaggagacactcctctccttataagttgattttgtaaggatgag 7621989  T
Q  486 ttagacccaaaaatttcaaca 506  Q
    |||| |||  |||||||||||    
T  7621990 ttaggccc-caaatttcaaca 7622009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 9091301 - 9091233
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggtta 413  Q
    ||||||||||||| |||||  |||||||| |||||||||| |||||||||||||||| |||||||||||    
T  9091301 tgcgatctgcccctagttgttttatgttgacttgtctttgagggggtggatttagtctcacatcggtta 9091233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 19337387 - 19337491
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaact-taaagcaatgggatattcaaggacattccg 147  Q
    ||||||||||||| |||||||||||||||||| || | | |||| |||| |||||||||||||||||||  |||||||||| || ||| || |||||||     
T  19337387 atgggaaccaaaagaaggtgaattgaacatcaggaaaagtggcaaagtgcattggaaaagtggaaaactcaaaagcaatggaatgttcgagaacattcct 19337486  T
Q  148 gcgaa 152  Q
    |||||    
T  19337487 gcgaa 19337491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 19345235 - 19345339
Alignment:
Q  155 tgtctctaacaagactgaagagtctttcgctttcaaagttaaagatggaatgtttatgcgatggtacctaaccgagaaggggaggttagtaggtggtgat 254  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||| | ||||   |||||| | ||||||  ||| |||||||||||||||  ||||    
T  19345235 tgtctctaacaagaatgaagattctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcgaacgggaggttagtaggtcatgat 19345334  T
Q  255 ggaga 259  Q
    |||||    
T  19345335 ggaga 19345339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 19355407 - 19355511
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactta-aagcaatgggatattcaaggacattccg 147  Q
    ||||||||||||| |||||||||||||||| | || | |||||| |||| |||||||||| |||||||||| ||| ||||| |||||| || |||||||     
T  19355407 atgggaaccaaaagaaggtgaattgaacataaggaaaagcggcaaagtgcattggaaaagcggaaaacttagaagtaatggaatattcgagaacattcca 19355506  T
Q  148 gcgaa 152  Q
    |||||    
T  19355507 gcgaa 19355511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 19504242 - 19504142
Alignment:
Q  47 gtatgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactt-aaagcaatgggatattcaaggacattc 145  Q
    ||||||||||||||| || ||||||||||||| | || | |||||| |||| |||||||||| ||||||||| |||||||||| |||||| || ||||||    
T  19504242 gtatgggaaccaaaagaacgtgaattgaacataaggaaaagcggcaaagtgcattggaaaagcggaaaacttaaaagcaatggaatattcgagaacattc 19504143  T
Q  146 c 146  Q
    |    
T  19504142 c 19504142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 19287648 - 19287715
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaac 116  Q
    ||||||||| ||| ||||||||||||||||||||  |||||||| ||||||||||||||| |||||||    
T  19287648 atgggaacctaaagaaggtgaattgaacatcaagcaacgcggcaaagtgtattggaaaagcggaaaac 19287715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 36997156 - 36997281
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||| |||||||||||| || || ||   |  |||||| ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  36997156 ctttgagggggtggaattagtcccacattgggtagatactactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 36997255  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  36997256 gatgagttaggccc-caaatttcaaca 36997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 42228811 - 42228874
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    ||||||||||||||||| ||| |||| | ||||||||| ||||||||||| |||||||||||||    
T  42228811 agagtttataaagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttagaccc 42228874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 20298630 - 20298505
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||  | || ||   |  |||||  ||||||||||||||||| |||||||| | ||||||||||| ||||||||     
T  20298630 ctttgagggggtggatttagtcccacatttgatagatattattcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaat 20298531  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  20298530 gatgagttaggccc-caaatttcaaca 20298505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 493
Target Start/End: Original strand, 36037223 - 36037293
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    |||||| ||||||||||||||||| |||||||| | || |||||| | ||||||||| |||||||||||||    
T  36037223 cttgatgagagtttataaagaggatgcactcctcacctcacaagccggttttgtaaggatgagttagaccc 36037293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 496
Target Start/End: Original strand, 39124964 - 39125030
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaa 496  Q
    ||||||||||||||||| |||||||| |||||||||||   ||||||||| ||||||||| ||||||    
T  39124964 agagtttataaagaggaggcactcctcatcttacaagccagttttgtaagaatgagttaggcccaaa 39125030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 23027942 - 23027833
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| || || || | |  |||||  |||| |||||||||||| |||||||| | ||||||||| | |||| ||||    
T  23027942 ctttgagggggtggatttagtcccacataggatagatagaactcttgagaagagcttataaagaggaggcactcctcaccttacaagccggttttttaag 23027843  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  23027842 aatgagttag 23027833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 35908680 - 35908777
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||| | |||||||| | | ||||||| | ||||||||| |||||||||    
T  35908680 ggatttagtcccacatcgggtagataggatacttgagaagagtttataaagagaaggcactcctcaccgtacaagccggttttgtaaggatgagttag 35908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 19390649 - 19390749
Alignment:
Q  155 tgtctctaacaagactgaagagtctttcgctttcaaagttaaagatggaatgtttatgcgatggtacctaaccgagaaggggaggttagtaggtggtgat 254  Q
    |||||||||||||  |||||| ||||| |||||| ||||||||||||| | |||||| ||||||| | | |||  ||||||||||||| || ||| ||||    
T  19390649 tgtctctaacaaggatgaagattcttttgctttcgaagttaaagatgggaagtttatacgatggttcattacctcgaaggggaggttaataagtgctgat 19390748  T
Q  255 g 255  Q
    |    
T  19390749 g 19390749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 507
Target Start/End: Complemental strand, 36039865 - 36039782
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    |||||| ||||||||||||||||| ||||| || | || |||||| | ||||||||| |||||||||||||  ||||||||||||    
T  36039865 cttgatgagagtttataaagaggatgcactactcacctcacaagccggttttgtaaggatgagttagaccc-caaatttcaacag 36039782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 583 - 622
Target Start/End: Original strand, 19342969 - 19343008
Alignment:
Q  583 agatagattaagatccgaaaaagtgtatacctattttatt 622  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19342969 agatagattaagatccgaaaaagtgtatacccattttatt 19343008  T

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Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 583 - 622
Target Start/End: Original strand, 19372663 - 19372702
Alignment:
Q  583 agatagattaagatccgaaaaagtgtatacctattttatt 622  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19372663 agatagattaagatccgaaaaagtgtatacccattttatt 19372702  T

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Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 14019810 - 14019907
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||   |||||  ||||||||||||||||| |||||||| | |  |||||| | ||||||||| |||||||||    
T  14019810 ggatttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgaacaagccggttttgtaaggatgagttag 14019907  T

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Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 10989098 - 10989023
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  10989098 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 10989023  T

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Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 10989305 - 10989230
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  10989305 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 10989230  T

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Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 19370913 - 19371001
Alignment:
Q  68 gaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactta-aagcaatgggatattcaaggacattccggcgaatgt 155  Q
    ||||||||||| |||| ||  |||| |||| ||||||||||||||||||||| |||||||||  ||||| || ||||||| | ||||||    
T  19370913 gaattgaacattaagaaacaaggcaaagtgcattggaaaagtggaaaacttagaagcaatggattattcgagaacattccagagaatgt 19371001  T

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Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 35561706 - 35561782
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||| || || | ||||||||| |||||||||||||  |||||||||||    
T  35561706 agagtttataaagaggaggcaatcctcaccttgcatgccggttttgtaaggatgagttagacccccaaatttcaaca 35561782  T

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Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 478
Target Start/End: Original strand, 40754441 - 40754532
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaa 478  Q
    ||||||||| ||||||||||||| | || || |||  |||||  |||||| ||||||||||  ||||||| ||||||||||||| ||||||||    
T  40754441 gggggtggacttagtcccacatcagatagatgggactcttgagaagagtt-ataaagaggagacactcctcatcttacaagctggttttgtaa 40754532  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 43599351 - 43599426
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  43599351 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 43599426  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 455
Target Start/End: Original strand, 15711498 - 15711561
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| ||||||||    
T  15711498 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcct 15711561  T

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Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 14582230 - 14582328
Alignment:
Q  390 gtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||||||||||||||||  | |||||  ||  |||||  |||||||||||||||||  |||| || | | ||||| ||||||||||||| ||||||||    
T  14582230 gtggatttagtcccacatttgataaatatgatacttgagaagagtttataaagaggagccacttctcaccgtacaaactgattttgtaaggatgagtta 14582328  T

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Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 488
Target Start/End: Complemental strand, 15011093 - 15011035
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||    
T  15011093 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 15011035  T

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Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 30176535 - 30176469
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||| ||||||||||||||||| |||||| | | || |||||| | ||||||||| |||||||||    
T  30176535 cttgatgagagtttataaagaggaggcactcttcacctcacaagccggttttgtaaggatgagttag 30176469  T

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Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 38287839 - 38287785
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagagga 446  Q
    ||||||||||||||||||| || || |||  |||||| |||||||||||||||||    
T  38287839 ggatttagtcccacatcggatagataggattcttgataagagtttataaagagga 38287785  T

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Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 492
Target Start/End: Original strand, 5496594 - 5496663
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||| | ||||||||||||||| ||||||||||  | |||||||| |||||| |  ||||||||||||    
T  5496594 cttgatgaaagtttataaagaggaggcactccttacttcacaagctggttttgtgatgatgagttagacc 5496663  T

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Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 27402227 - 27402118
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||| ||||||| |||||| ||  ||  ||||||  |||||||||||||||| ||||| || | |||| |||| | | |||||||    
T  27402227 ctttgagggggtggatttaatcccacaccggttagatatgactcttgataggagtttataaagaggaggcacttctcaccttataagcaggtcttgtaag 27402128  T
Q  480 tatgagttag 489  Q
     |||| ||||    
T  27402127 gatgaattag 27402118  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 413
Target Start/End: Complemental strand, 36994046 - 36994013
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggtta 413  Q
    ||||| ||||||||||||||||||||||||||||    
T  36994046 ctttgagggggtggatttagtcccacatcggtta 36994013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 489
Target Start/End: Complemental strand, 39588146 - 39588089
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||| |||||||| | |||| |||| | ||||||||| |||||||||    
T  39588146 agtttataaagaggaggcactcctcaccttataagccggttttgtaaggatgagttag 39588089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 507
Target Start/End: Complemental strand, 40902457 - 40902381
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| || |||||| |||  ||||||||||||    
T  40902457 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggataagttaggccc-caaatttcaacag 40902381  T

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Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 335
Target Start/End: Complemental strand, 43984560 - 43984531
Alignment:
Q  306 atgagggggtgggttggtaattccacctta 335  Q
    ||||||||||||||||||||||||||||||    
T  43984560 atgagggggtgggttggtaattccacctta 43984531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 3183975 - 3183900
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||  ||||||||| |||  |||||||||||    
T  3183975 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaacgatgagttaggccc-caaatttcaaca 3183900  T

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Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 16454699 - 16454624
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  16454699 agagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 16454624  T

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Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 19404926 - 19404962
Alignment:
Q  270 gatattggaaatgcagacatttgttatggatataata 306  Q
    ||||||||||||||||| || ||||||||||||||||    
T  19404926 gatattggaaatgcagatatgtgttatggatataata 19404962  T

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Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 23027619 - 23027547
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcact 452  Q
    ||||| ||||||||||||||||||||||| | || || | |  |||||  ||||||||||||||||| |||||    
T  23027619 ctttgagggggtggatttagtcccacatcagatagatagaactcttgagaagagtttataaagaggaggcact 23027547  T

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Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 490
Target Start/End: Complemental strand, 26122840 - 26122748
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttaga 490  Q
    ||||||||||||| || ||  ||  |||||| ||||||||||||||||| ||| |||| |  ||||||| || |||| |||| ||||||||||    
T  26122840 agtcccacatcggatagatgagactcttgatgagagtttataaagaggatgcaatcctcacattacaagttggttttataaggatgagttaga 26122748  T

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Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 478
Target Start/End: Complemental strand, 39587922 - 39587874
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaa 478  Q
    |||||||||||||||||||||||||| | |||| |||| | ||||||||    
T  39587922 agagtttataaagaggaagcactcctcaccttataagccggttttgtaa 39587874  T

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Target: chr3 (Bit Score: 116; Significance: 1e-58; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 311 - 449
Target Start/End: Complemental strand, 34357093 - 34356954
Alignment:
Q  311 ggggtgggttggtaattccacc-ttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcg 409  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34357093 ggggtgggttggtaattccacccttaaaattgtgatgcgatctgccccaagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcg 34356994  T
Q  410 gttaaattggaagcttgattagagtttataaagaggaagc 449  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  34356993 gttagattggaagcttgatcagagtttataaagaggaagc 34356954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 307 - 506
Target Start/End: Original strand, 21750392 - 21750590
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||| ||| ||||||||||||||||||| ||| ||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||    
T  21750392 tgaggggatggattggtaattccaccttaaaattgcgatgcgatctgcccctagtcaccttatgttggcttgtctttgagggggtggatttagtcccaca 21750491  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||| || ||||||||||| ||||||||||||||||| |||||||| | |||||||||   ||||||||| ||||||||| |||  |||||||||||    
T  21750492 tcggttagataggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggccc-caaatttcaaca 21750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 345 - 489
Target Start/End: Complemental strand, 38300902 - 38300757
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaa-attggaagcttgattagagtttataaaga 443  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  38300902 tgcgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcggttaagataggaagcttgatcagagtttataaaga 38300803  T
Q  444 ggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||| |||||||| | ||||||||| | ||||||| | |||||||||    
T  38300802 ggaggcactcctcaccttacaagccggttttgtacggatgagttag 38300757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 307 - 455
Target Start/End: Original strand, 48407774 - 48407912
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccaca 406  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||          ||||||| |||||||||||||||||||||    
T  48407774 tgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgcctt----------gtctttgagggggtggatttagtcccaca 48407863  T
Q  407 tcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  48407864 tcggttagattggaagcttgatcagagtttataaagaggaagcactcct 48407912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 345 - 478
Target Start/End: Complemental strand, 31564152 - 31564019
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||| |||||||||||||||    
T  31564152 tgcgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcagttagataggaagcttgatcagagtttataaagag 31564053  T
Q  445 gaagcactccttatcttacaagctgattttgtaa 478  Q
    || |||||||| | ||||||||| | ||||||||    
T  31564052 gaggcactcctcaccttacaagccggttttgtaa 31564019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 345 - 489
Target Start/End: Complemental strand, 38300433 - 38300288
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaa-attggaagcttgattagagtttataaaga 443  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  38300433 tgcgatctgcccttagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcggttaagataggaagcttgatcagagtttataaaga 38300334  T
Q  444 ggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||| |||||||  | ||||||||| | ||||||||| |||||||||    
T  38300333 ggaggcactccccaccttacaagccggttttgtaaggatgagttag 38300288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 345 - 489
Target Start/End: Complemental strand, 31563848 - 31563704
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||| |||||||||||||||    
T  31563848 tgcgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcagttagataggaagcttgatcagagtttataaagag 31563749  T
Q  445 gaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    || |||||||| | |||| |||| | |||||||||  ||||||||    
T  31563748 gaggcactcctcaccttagaagccggttttgtaaggttgagttag 31563704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 386 - 507
Target Start/End: Complemental strand, 34356950 - 34356829
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||| | ||||||||| |||||    
T  34356950 gggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgag 34356851  T
Q  486 ttagacccaaaaatttcaacag 507  Q
    |||  ||| |||||| ||||||    
T  34356850 ttatgccccaaaattacaacag 34356829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 13769405 - 13769279
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| || || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||||| |||||||||    
T  13769405 ctttgagggggtggatttagtcccacattggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaag 13769306  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| ||| ||| ||||||||    
T  13769305 gatgagttaggccccaaattttcaaca 13769279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 3985763 - 3985872
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || ||  ||   ||||  |||||||||||||||||||||||||| | ||||||||| | |||||||||    
T  3985763 ctttgagggggtggatttagtcccacatcggatagatatgacttttgagaagagtttataaagaggaagcactcctcaccttacaagccggttttgtaag 3985862  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  3985863 gatgagttag 3985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 33909982 - 33909821
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||| | ||||||||| |||||||||| ||||| ||||||| ||||| || |||||  |||  ||  || | ||| | |||||||||||||||    
T  33909982 tgcgatctgcctctagttgccttgtgttggcttgactttgagggggtgaatttaatctcacataagttggataagacgtttggtaagagtttataaagag 33909883  T
Q  445 gaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    || ||||||||   ||||||||| | ||||||||| ||||||||| | |  |||||||||||    
T  33909882 gatgcactcctcgccttacaagccggttttgtaaggatgagttaggctcccaaatttcaaca 33909821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 44573316 - 44573425
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | | ||||||| | |||||||||    
T  44573316 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccctacaagccggttttgtaag 44573415  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  44573416 gatgagttag 44573425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 380 - 488
Target Start/End: Complemental strand, 34715569 - 34715461
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |   ||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  34715569 ctttgagggggtggatttagtcccacatcggatagatagcacttttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 34715470  T
Q  480 tatgagtta 488  Q
     ||||||||    
T  34715469 gatgagtta 34715461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 479
Target Start/End: Original strand, 27219319 - 27219418
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  27219319 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 27219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 44573629 - 44573754
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||  | || ||   || |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  44573629 ctttgagggggtggatttagtcccacataagatagataaaaatcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 44573728  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  44573729 gatgagttaggccc-caaatttcaaca 44573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 446
Target Start/End: Complemental strand, 33909477 - 33909376
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||| | ||||||||| || ||||||| ||||| ||||||||||||||||||| ||| ||||  | ||| |||| || ||||||||| |||||    
T  33909477 tgcgatctgcctctagttgccttgtgctggcttgactttgagggggtggatttagtcccaaatcagttaggtaggacgcttaataagagtttattaagag 33909378  T
Q  445 ga 446  Q
    ||    
T  33909377 ga 33909376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 48511741 - 48511644
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  48511741 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 48511644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 54369029 - 54369138
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| |  |||||| | | ||| |||||    
T  54369029 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcactttacaaaccggtttcgtaag 54369128  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  54369129 gatgagttag 54369138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 489
Target Start/End: Complemental strand, 10453808 - 10453708
Alignment:
Q  389 ggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||||||||||||||| ||||| || || |||  |||||  || |||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||    
T  10453808 ggtggatttagtcccagatcggatagataggattcttgagaagggtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtta 10453709  T
Q  489 g 489  Q
    |    
T  10453708 g 10453708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 488
Target Start/End: Complemental strand, 14170113 - 14170005
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||| |||||||||||||||||||| |||||   |  |||||  ||| ||||||||||||| |||||||| | ||||||||| | |||||||||    
T  14170113 ctttgaggggctggatttagtcccacatcggataaataacactcttgagaagattttataaagaggaggcactcctcaccttacaagccggttttgtaag 14170014  T
Q  480 tatgagtta 488  Q
     ||||||||    
T  14170013 gatgagtta 14170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 487
Target Start/End: Complemental strand, 43101485 - 43101378
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || || |||  |||||  ||||||||||||||||| |||||||| | |||||||   | |||||||||    
T  43101485 ctttgagggggtggatttagtcccacatcagatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaaatcggttttgtaag 43101386  T
Q  480 tatgagtt 487  Q
     |||||||    
T  43101385 gatgagtt 43101378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 48407530 - 48407601
Alignment:
Q  435 ttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||||||| | ||||||||| | ||||||||| ||||||||  ||| ||||||||||||    
T  48407530 ttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttatgccccaaaatttcaaca 48407601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 24539143 - 24539253
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagttta-taaagaggaagcactccttatcttacaagctgattttgtaa 478  Q
    ||||| ||||||||||||||||| ||||| |||| ||  ||  |||||| |||||||  |||||||||  ||||||| | ||||||||| ||||||||||    
T  24539143 ctttgagggggtggatttagtcctacatcagttagataagactcttgataagagttttgtaaagaggagacactcctcaccttacaagccgattttgtaa 24539242  T
Q  479 gtatgagttag 489  Q
    | |||||||||    
T  24539243 ggatgagttag 24539253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 45443270 - 45443395
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| || || || | |  |||||  ||||||||||||||||| |||||| | | ||||||||| | |||| ||||    
T  45443270 ctttgagggggtggatttagtcccacattggatagatagcactcttgagaagagtttataaagaggaggcactcttcaccttacaagccggttttttaag 45443369  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  45443370 gatgagttaggccc-caaatttcaaca 45443395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 10856728 - 10856631
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| |  || |||  |||||  ||||||||||||||||| ||||||||||   ||||||| | ||||||||| |||||||||    
T  10856728 ggatttagtcccacatcggatggataggattcttgaaaagagtttataaagaggaggcactccttactatacaagccggttttgtaaggatgagttag 10856631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 11244643 - 11244546
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||   |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||||| |||||||||    
T  11244643 ggatttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttag 11244546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 465
Target Start/End: Complemental strand, 24860174 - 24860090
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaa 465  Q
    ||||| ||||||||||||||||| ||||||| ||||| |||  |||||  ||||||||||||||||| |||||||| | |||||||    
T  24860174 ctttgagggggtggatttagtcc-acatcggataaataggactcttgagaagagtttataaagaggaggcactcctcaccttacaa 24860090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 430 - 507
Target Start/End: Original strand, 44573976 - 44574052
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| |||  ||||||||||||    
T  44573976 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaacag 44574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 507
Target Start/End: Original strand, 50692559 - 50692642
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    |||||| ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  ||||||||||||    
T  50692559 cttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaacag 50692642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 38300598 - 38300560
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtcttt 383  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  38300598 tgcgatctgcccctagttgccttatgttggcttgtcttt 38300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 465
Target Start/End: Complemental strand, 47833769 - 47833691
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaa 465  Q
    |||||||||||||||||||||||| || || |||  |||||  || |||||||||||||| |||||||| | |||||||    
T  47833769 ggggtggatttagtcccacatcggatagataggactcttgagaagtgtttataaagaggaggcactcctcaccttacaa 47833691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 50203971 - 50203846
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||| ||||||| |||||||| || ||  ||  |||||  ||||||||||||||||| |||||||| | |||| || | | |||||||||    
T  50203971 ctttgagggggtgggtttagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcactcctcaccttataaaccggttttgtaag 50203872  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  50203871 gatgagttaggccc-caaatttcaaca 50203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 9180370 - 9180467
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  | |||||||||||||||  ||||||| | | ||||||||| ||||||||| || ||||||    
T  9180370 ggatttagtcccacatcggatagataggattcttgagaaaagtttataaagaggagacactcctcaccgtacaagctggttttgtaaggatcagttag 9180467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 22407505 - 22407430
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  22407505 agagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 22407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 22407712 - 22407637
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  22407712 agagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 22407637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 48511512 - 48511428
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgt 476  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| ||| |||| | | ||||||| | ||||||    
T  48511512 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgt 48511428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 50692363 - 50692438
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  50692363 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 50692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 9179173 - 9179232
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| |||||||| | ||||||||  | ||||||||| |||||||||    
T  9179173 agagtttataaagaggatgcactcctcaccttacaagtcggttttgtaaggatgagttag 9179232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 26915149 - 26915204
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaa 478  Q
    |||||| |||||||||| ||||||  || ||||||| |||||||||||||||||||    
T  26915149 cttgataagagtttatatagaggagacaatccttatattacaagctgattttgtaa 26915204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 36020856 - 36020915
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| |||||| ||| | ||||||| ||||||||| | |||||||||    
T  36020856 agagtttataaagaggaggcactcattaccgtacaagccgattttgtatggatgagttag 36020915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 39078835 - 39078776
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  39078835 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 39078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 39956738 - 39956679
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  39956738 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 39956679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 49477574 - 49477633
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  49477574 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 49477633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 455
Target Start/End: Original strand, 53966235 - 53966298
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| ||||||||    
T  53966235 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcct 53966298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 380 - 446
Target Start/End: Original strand, 41380714 - 41380780
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagagga 446  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  |||||||||||||||||    
T  41380714 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagagga 41380780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 333
Target Start/End: Original strand, 48407714 - 48407744
Alignment:
Q  303 aatatgagggggtgggttggtaattccacct 333  Q
    |||||||||||||||||||||||||||||||    
T  48407714 aatatgagggggtgggttggtaattccacct 48407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 49637432 - 49637497
Alignment:
Q  429 tagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaa 495  Q
    ||||||||||||||||   |||| ||| |||||||| |||||||||||||  |||||||||||||||    
T  49637432 tagagtttataaagagtg-gcacccctcatcttacatgctgattttgtaaagatgagttagacccaa 49637497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 10450526 - 10450429
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||   |||||  ||||||||||| ||||| |||||||| | | ||||||||| ||||||  | |||||||||    
T  10450526 ggatttagtcccacatcggatagataggtttcttgagaagagtttataacgaggaggcactcctcaccgtacaagctggttttgtggggatgagttag 10450429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 10450750 - 10450653
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||   |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||  | |||||||||    
T  10450750 ggatttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtggggatgagttag 10450653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 15820707 - 15820610
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||| |||||  ||||||| | | ||||||| | ||||||| | |||||||||    
T  15820707 ggatttagtcccacatcggatagataggattcttgagaagagtttataacgaggagacactcctcaccgtacaagccggttttgtagggatgagttag 15820610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 507
Target Start/End: Original strand, 21833564 - 21833640
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    ||||||||||||||||| ||| |||||| | ||||||| | ||| ||||| ||||||||| |||  ||||||||||||    
T  21833564 agagtttataaagaggaggcaatccttagcctacaagccggtttcgtaaggatgagttaggccc-caaatttcaacag 21833640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 24453780 - 24453877
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||   |||||  |||||||||||| |||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  24453780 ggatttagtcccacatcggatagatagggttcttgagaagagtttataaacaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 24453877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 488
Target Start/End: Complemental strand, 40230710 - 40230645
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||||| ||||||||||||||||| ||| |||| | ||||||||| | |||||||||  |||||||    
T  40230710 cttgatgagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggttgagtta 40230645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 455
Target Start/End: Complemental strand, 48685425 - 48685356
Alignment:
Q  386 gggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||||||||||||||||||||||| || || | |  |||||  |||||||||||||||||  |||||||    
T  48685425 gggggtggatttagtcccacatcggatatatagtactcttgagaagagtttataaagaggagacactcct 48685356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 489
Target Start/End: Original strand, 49477369 - 49477426
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  49477369 agtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 49477426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 507
Target Start/End: Complemental strand, 54591529 - 54591453
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    |||||||||||||  || ||| |||| | ||||||||| | ||||||||| |||||||||||||  ||||||||||||    
T  54591529 agagtttataaaggtgaggcaatcctcaccttacaagccggttttgtaagcatgagttagaccc-caaatttcaacag 54591453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 493
Target Start/End: Complemental strand, 5321637 - 5321538
Alignment:
Q  393 gatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||||||||||||||| || || |||   ||||  |||||||||||||||||| ||||||| | ||||  |||  |||||||||| ||||||| ||||    
T  5321637 gatttagtcccacatcggatagataggatttttgaaaagagtttataaagaggaa-cactcctcaccttattagccaattttgtaaggatgagtttgacc 5321539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 9264150 - 9264075
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  9264150 agagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 9264075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 9264357 - 9264282
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  9264357 agagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 9264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 507
Target Start/End: Original strand, 35011897 - 35011980
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    |||||| ||||||||||||||||| |||||||| | ||||  | | | ||||||||| ||||||||| |||  ||||||||||||    
T  35011897 cttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggccc-caaatttcaacag 35011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 495
Target Start/End: Complemental strand, 45941168 - 45941132
Alignment:
Q  459 cttacaagctgattttgtaagtatgagttagacccaa 495  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  45941168 cttacaagctggttttgtaaggatgagttagacccaa 45941132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 51642492 - 51642417
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  51642492 agagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 51642417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 51642699 - 51642624
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  51642699 agagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 51642624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 3e-53; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 313 - 506
Target Start/End: Original strand, 1468885 - 1469078
Alignment:
Q  313 ggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggtt 412  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  1468885 ggtgggttggtaattccaccttaaaattgtgatgtgatctgcccctagttgccttatattggcttgtctttgagggggtgga-ttagtcccacatcggtt 1468983  T
Q  413 aaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta-gacccaaaaatttcaaca 506  Q
    | || ||||||||||| ||||| |||||||||||  |||||||   ||||||||| | ||||||||| |||||||| | ||||||||||||||||    
T  1468984 agataggaagcttgatcagagtatataaagaggagacactcctcgccttacaagccggttttgtaaggatgagttaggccccaaaaatttcaaca 1469078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 1469200 - 1469286
Alignment:
Q  307 tgagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtgg 393  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  1469200 tgagggggtgggttggtaattccaccttaaaattgtgatgcgatctgcccctagttgtcttatgttggcttgtctttgagggggtgg 1469286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 10418452 - 10418343
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||| ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  10418452 ctttgagggggtggatttagtcccacatcggatagatagcactcttgatgagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 10418353  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  10418352 gatgagttag 10418343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 349 - 493
Target Start/End: Complemental strand, 28072617 - 28072473
Alignment:
Q  349 atctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaag 448  Q
    ||||||| | ||||||||| |||||  |||||||||  ||||||||||||||||||||||||||| ||  || ||||||  |||||||||||||||||      
T  28072617 atctgcctctagttgccttgtgttgatttgtctttgaaggggtggatttagtcccacatcggttagataagacgcttgacaagagtttataaagaggaga 28072518  T
Q  449 cactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
     |||||| |||||||||| ||  |||||||  |||||||| ||||    
T  28072517 tactcctcatcttacaagttggatttgtaacaatgagttataccc 28072473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 27914404 - 27914331
Alignment:
Q  416 ttggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||||||| | ||||||||| |||||||||    
T  27914404 ttggaagcttgatcagagtttataaagaggaggcactccttaccttacaagccggttttgtaaggatgagttag 27914331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 489
Target Start/End: Original strand, 8144014 - 8144116
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    |||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||    
T  8144014 ggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagt 8144113  T
Q  487 tag 489  Q
    |||    
T  8144114 tag 8144116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 24055223 - 24055098
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  |||||||||||||| || |||||||| | ||||||||| | |||||||||    
T  24055223 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagacgaggcactcctcaccttacaagccggttttgtaag 24055124  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  24055123 gatgagttaggccc-caaatttcaaca 24055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 19543000 - 19543107
Alignment:
Q  49 atgggaaccaaaacaaggtgaattgaacatcaagagacgcggcatagtgtattggaaaagtggaaaactta-aagcaatgggatattcaaggacattccg 147  Q
    |||||||||||| ||| |||||||| | ||||||| | |||||| ||||||||||||||| |||||||||| ||| |||||| |||||  | |||| |||    
T  19543000 atgggaaccaaagcaacgtgaattggaaatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttagaagaaatgggttattcgtgaacataccg 19543099  T
Q  148 gcgaatgt 155  Q
    ||||||||    
T  19543100 gcgaatgt 19543107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 1744956 - 1744831
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||| |||||||||||| || || || | |  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  1744956 ctttgagggggtggagttagtcccacattggatagatagtactcttgaaaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 1744857  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  1744856 gatgagttaggccc-caaatttcaaca 1744831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 33396309 - 33396406
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| ||  || |||||| ||||||||| |||||||||    
T  33396309 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcattgtaaaagctggttttgtaaggatgagttag 33396406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 495
Target Start/End: Complemental strand, 31987 - 31872
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||| ||||||| || ||  ||  |||||| |||||||||||||| || |||||||| | |||||||||   |||||||||    
T  31987 ctttgagggggtggatttagtccaacatcggatagataagactcttgataagagtttataaagacgaggcactcctcaacttacaagccagttttgtaag 31888  T
Q  480 tatgagttagacccaa 495  Q
     || |||||| |||||    
T  31887 gattagttaggcccaa 31872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 28072065 - 28072003
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatc 408  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||||    
T  28072065 tgcgatctgcccctagttgccttatgttggcttgtcattg-aggggtggatttagtctcacatc 28072003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 19054483 - 19054608
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||| ||||||||||||||| || ||   |  |||||  |||||||||||||| || |||||||| | ||||||||| | |||||||||    
T  19054483 ctttgagggggtggaattagtcccacatcggatagataacactcttgagaagagtttataaagatgaggcactcctcaccttacaagccggttttgtaag 19054582  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  19054583 gatgagttagtccc-caaatttcaaca 19054608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 25184212 - 25184309
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||||| |||||| || || |||  |||||| ||||||||||||||||||||| |||| | ||||||||| | ||||||  | |||||||||    
T  25184212 ggatttagtcccgcatcggatagataggattcttgataagagtttataaagaggaagcaatcctcaccttacaagccggttttgtggggatgagttag 25184309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 507
Target Start/End: Complemental strand, 12134590 - 12134471
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    |||||||| ||||||||||||||| || || | |  |||||  |||||||||||||||||  ||||||| | ||||||| | | ||||||||| ||||||    
T  12134590 ggggtggacttagtcccacatcggatagatagcactcttgagaagagtttataaagaggagacactcctaaccttacaaaccggttttgtaaggatgagt 12134491  T
Q  487 tagacccaaaaatttcaacag 507  Q
    ||| |||  ||||||||||||    
T  12134490 taggccc-caaatttcaacag 12134471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 507
Target Start/End: Original strand, 28149826 - 28149909
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    |||||| ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  ||||||||||||    
T  28149826 cttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaacag 28149909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 19712673 - 19712614
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||||| ||||||||| |||||||||    
T  19712673 agagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttag 19712614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 478
Target Start/End: Complemental strand, 21067171 - 21067073
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaa 478  Q
    ||||| ||||||||||||||||||| ||||| || || | |  |||||  ||||||||||||||||| ||||||||   ||||||||| | ||||||||    
T  21067171 ctttgagggggtggatttagtcccatatcggatagatagcattcttgagaagagtttataaagaggaggcactcctccccttacaagccggttttgtaa 21067073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 478
Target Start/End: Complemental strand, 21088962 - 21088864
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaa 478  Q
    ||||| ||||||||||||||||||| ||||| || || | |  |||||  ||||||||||||||||| ||||||||   ||||||||| | ||||||||    
T  21088962 ctttgagggggtggatttagtcccatatcggatagatagcattcttgagaagagtttataaagaggaggcactcctccccttacaagccggttttgtaa 21088864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 10733552 - 10733443
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| ||  | ||   |  |||||  |||||||||||||||||  ||||||| | ||||||||| | |||||||||    
T  10733552 ctttgagggggtggatttagtcccacattggacagataacactcttgagaagagtttataaagaggagacactcctcaccttacaagccggttttgtaag 10733453  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  10733452 gatgagttag 10733443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 507
Target Start/End: Original strand, 24558828 - 24558904
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    |||||||||||||||||  || |||| | ||||||||||| ||||||||| ||||||||| |||  ||||||||||||    
T  24558828 agagtttataaagaggagacaatcctcaccttacaagctggttttgtaaggatgagttaggccc-caaatttcaacag 24558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 26842722 - 26842819
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || ||   |||||  ||||||||||||||||| |||||||| | | ||||||||| ||||||  | |||||||||    
T  26842722 ggatttagtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagctggttttgtggggatgagttag 26842819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 489
Target Start/End: Complemental strand, 12124749 - 12124709
Alignment:
Q  449 cactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  12124749 cactcctcatcttacaagctgattttgtaaggatgagttag 12124709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 16877074 - 16876999
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  16877074 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 16876999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 5269337 - 5269274
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    ||||||||||||||| | ||| |||| | ||||||||| | ||||||||| |||||||||||||    
T  5269337 agagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttagaccc 5269274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 15101175 - 15101116
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  15101175 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 15101116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 506
Target Start/End: Complemental strand, 17147968 - 17147894
Alignment:
Q  431 gagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    |||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||  ||| |||||||||||    
T  17147968 gagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag-gccacaaatttcaaca 17147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 484
Target Start/End: Original strand, 30539226 - 30539329
Alignment:
Q  381 tttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagt 480  Q
    |||| ||||||| ||||||||||||||||| || ||  ||  |||||| |||||||||||||  ||  ||||||| | ||||||||| | |||||||||     
T  30539226 tttgagggggtgaatttagtcccacatcggatagataagactcttgataagagtttataaaggcgagacactcctcaccttacaagccggttttgtaagg 30539325  T
Q  481 atga 484  Q
    ||||    
T  30539326 atga 30539329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 506
Target Start/End: Complemental strand, 16876892 - 16876819
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  16876892 agtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 16876819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 27443601 - 27443539
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||||||||||||||| ||||||| | | ||||| | |||||||||||  |||||||||||    
T  27443601 agagtttataaagaggaaacactcctcaccgtacaatccgattttgtaaggttgagttagacc 27443539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 19543244 - 19543281
Alignment:
Q  270 gatattggaaatgcagacatttgttatggatataatat 307  Q
    |||||||||||||||||| | |||||||||||||||||    
T  19543244 gatattggaaatgcagacttgtgttatggatataatat 19543281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 19753718 - 19753609
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| |  || || |||  |||||  ||||||||||||||| |  ||||||| | ||||||||  | || ||||||    
T  19753718 ctttgagggggtggatttagtcccacatggtatagataggactcttgagaagagtttataaagagaagacactcctcaccttacaagacggttctgtaag 19753619  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  19753618 gatgagttag 19753609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 26339944 - 26339883
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactc 453  Q
    ||||||||||||||||||| || ||  ||| |||||  ||||||||||||||||| ||||||    
T  26339944 ggatttagtcccacatcggatagataagaatcttgagaagagtttataaagaggatgcactc 26339883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 506
Target Start/End: Original strand, 16590228 - 16590299
Alignment:
Q  434 tttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||| ||| |||| |  |||||||| | ||||||||| |||||||||||||  |||||||||||    
T  16590228 tttataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttagaccc-caaatttcaaca 16590299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 506
Target Start/End: Complemental strand, 16605152 - 16605081
Alignment:
Q  434 tttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||| ||| |||| |  |||||||| | ||||||||| |||||||||||||  |||||||||||    
T  16605152 tttataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttagaccc-caaatttcaaca 16605081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 6e-48; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 12965395 - 12965235
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    |||||||||| || |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| || ||||||||||| |||||||||||||||    
T  12965395 tgcgatctgcacctagttgccttatgttggcttgtctttgagggggtggatttagtgccacatcggttagataggaagcttgatcagagtttataaagag 12965296  T
Q  445 gaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  12965295 gaagcactcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 12965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 29432402 - 29432511
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| ||||| || |||  |||||| ||||||||||||||||| ||||| || | ||||||||| | |||||||||    
T  29432402 ctttgagggggtggatttagtcccacattggttagataggactcttgataagagtttataaagaggaggcacttctcaccttacaagccggttttgtaag 29432501  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  29432502 gatgagttag 29432511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 38663237 - 38663346
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| || | || |||  |||||| ||||||||||||||||| |||||| | | ||||||||| | |||||||||    
T  38663237 ctttgagggggtggatttagtcccacatcagtaagataggactcttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaag 38663336  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  38663337 gatgagttag 38663346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 873810 - 873685
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || |||  |||||  |||||||||| |||||| ||| |||| | ||||||||| | |||||||||    
T  873810 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttatagagaggaggcattcctcaccttacaagcaggttttgtaag 873711  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  873710 gatgagttaggccc-caaatttcaaca 873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 507
Target Start/End: Original strand, 24994062 - 24994185
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||   | ||||| ||| ||||||  ||||||||||||||||| ||||| || | ||||||||| | |||||||||    
T  24994062 ctttgagggggtggatttagtcccaca---gataaataggatgcttgagaagagtttataaagaggaggcactactcaccttacaagccggttttgtaag 24994158  T
Q  480 tatgagttagacccaaaaatttcaacag 507  Q
     ||||||||| |||  ||||||||||||    
T  24994159 gatgagttaggccc-caaatttcaacag 24994185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 37995748 - 37995639
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| ||| |||| | ||||||||| | |||||||||    
T  37995748 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaag 37995649  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  37995648 gatgagttag 37995639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 30588047 - 30588152
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||||||||| || | |  |||||| ||||||||||||||||| |||||||    |||||||||   |||||||||    
T  30588047 ctttgagggggtggatttagtcccacatcggttagatagaactcttgataagagtttataaagaggaggcactcc----cttacaagcctgttttgtaag 30588142  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  30588143 gatgagttag 30588152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 13843687 - 13843812
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || || | |  |||||  ||||||||||||||||| || ||||| | ||||||||| | |||||||||    
T  13843687 ctttgagggggtggatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcgctcctcaccttacaagccggttttgtaag 13843786  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  13843787 gatgagttaggccc-caaatttcaaca 13843812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 506
Target Start/End: Original strand, 38131754 - 38131879
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||| ||||||||||||||||||||| || || |||  |||||  |||||||||||||||||  || |||| | ||||||||| | |||||||||    
T  38131754 ctttgagggagtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggagacattcctcaccttacaagccggttttgtaag 38131853  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  38131854 gatgagttaggccc-caaatttcaaca 38131879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 488
Target Start/End: Original strand, 27760065 - 27760173
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || |||  |||||  ||||||| |||||| || |||||||| | ||||||||| | |||||||||    
T  27760065 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttctaaagaagaggcactcctcaccttacaagccggttttgtaag 27760164  T
Q  480 tatgagtta 488  Q
      |||||||    
T  27760165 gttgagtta 27760173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 24918154 - 24918260
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||   | || || ||| ||||||  ||||||||||||||||| ||||| || | ||||||||| | |||||||||    
T  24918154 ctttgagggggtggatttagtcccaca---gatagataggacgcttgagaagagtttataaagaggaggcactactcaccttacaagccggttttgtaag 24918250  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  24918251 gatgagttag 24918260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 1028207 - 1028082
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | ||||||| | | |||||| |     
T  1028207 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaaaccggttttgtgac 1028108  T
Q  480 tatgagttagacccaaaaatttcaaca 506  Q
     ||||||||| |||  |||||||||||    
T  1028107 gatgagttaggccc-caaatttcaaca 1028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 84136 - 84039
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  84136 ggatttagtcccacatcggatatataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttag 84039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 17016207 - 17016098
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || || |||  ||||| ||   |||||||||||||  ||||||| | ||||||||||  |||||||||    
T  17016207 ctttgagggggtggatttagtcccacatcagatagataggactcttgagtactttttataaagaggatacactcctcaccttacaagctagttttgtaag 17016108  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  17016107 gatgagttag 17016098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 488
Target Start/End: Complemental strand, 4465291 - 4465191
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtt 487  Q
    |||| ||||||||||||| ||||||| || |||  |||||| ||||||||  |||||||  ||||||| | |||| |||||| ||||||||| |||||||    
T  4465291 gggtagatttagtcccacgtcggttagataggactcttgataagagtttactaagaggagacactcctcaccttaaaagctggttttgtaaggatgagtt 4465192  T
Q  488 a 488  Q
    |    
T  4465191 a 4465191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 32395416 - 32395320
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| |||||||| |   ||||||| | ||||||| | ||||||||    
T  32395416 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcactgtacaagccggttttgtatggatgagtta 32395320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 40168923 - 40168848
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| ||| |||| ||||||||||||| ||||||||| ||||||||| |||  |||||||||||    
T  40168923 agagtatataaagaggaggcaatcctcatcttacaagctggttttgtaaggatgagttaggccc-caaatttcaaca 40168848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 507
Target Start/End: Original strand, 13844003 - 13844129
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||| | || || | |  |||||  ||||||||||||||||| ||||| || | |||||||   | |||||||||    
T  13844003 ctttgagggggtggatttagtcccacatctgatagatagtactcttgagaagagtttataaagaggaggcacttctcaccttacaaaacggttttgtaag 13844102  T
Q  480 tatgagttagacccaaaaatttcaacag 507  Q
     ||||||||| |||  ||||||||||||    
T  13844103 gatgagttaggccc-taaatttcaacag 13844129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 432 - 489
Target Start/End: Original strand, 18541764 - 18541821
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||| |||||||| | | ||||||| ||||||||||| |||||||||    
T  18541764 agtttataaagaggaggcactcctcaacctacaagccgattttgtaaggatgagttag 18541821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 22196428 - 22196331
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || | |  |||||  ||||||||||||||||| |||||||| | | || |||| | ||||||||| |||||||||    
T  22196428 ggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccgtaaaagccggttttgtaaggatgagttag 22196331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 507
Target Start/End: Original strand, 28156278 - 28156354
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    ||||||||||||||||| ||| |||| | ||||||||||| || |||||| |||||||||| ||  ||||||||||||    
T  28156278 agagtttataaagaggaggcaatcctcaccttacaagctggttatgtaaggatgagttagaacc-caaatttcaacag 28156354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 29396445 - 29396348
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| | || || |||| |||||  | ||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  29396445 ggatttagtcccacatcagatagataggaatcttgagaaaagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttag 29396348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 1892161 - 1892089
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaa 495  Q
    |||||| ||| ||||||||||||| || ||||| | ||||||||| | ||||||||| ||||||||| |||||    
T  1892161 cttgatgagaatttataaagaggaggccctcctcaccttacaagccggttttgtaaggatgagttaggcccaa 1892089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 13413624 - 13413699
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  13413624 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 13413699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 34457136 - 34457211
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  34457136 agagtttataaagaggatgcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 34457211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 48168 - 48109
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  48168 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 48109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 455
Target Start/End: Complemental strand, 4464996 - 4464921
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    ||||| |||||||||||||||||||| |  |||| |  |||  |||||| ||||||||||||||||| ||||||||    
T  4464996 ctttgagggggtggatttagtcccacgtttgttagaaaggactcttgataagagtttataaagaggaggcactcct 4464921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 35527052 - 35526993
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  35527052 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 35526993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 37781908 - 37781849
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||| ||||||||||| ||| |||| | ||||||||||| ||||||||| |||||||||    
T  37781908 agagtatataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttag 37781849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 435 - 489
Target Start/End: Complemental strand, 395091 - 395037
Alignment:
Q  435 ttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||| || |||||||| | ||||||||| ||||||||||| |||||||||    
T  395091 ttataaagaagaggcactcctcaccttacaagccgattttgtaaggatgagttag 395037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 489
Target Start/End: Original strand, 2716579 - 2716645
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||| ||||||||||| ||||| |||||||| | |||| |||| | ||||||||| |||||||||    
T  2716579 cttgataagagtttataaggaggaggcactcctcaccttataagccggttttgtaaggatgagttag 2716645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 490
Target Start/End: Complemental strand, 2908624 - 2908566
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttaga 490  Q
    ||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||||    
T  2908624 agtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaga 2908566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 506
Target Start/End: Complemental strand, 2908831 - 2908758
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  2908831 agtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 2908758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 493
Target Start/End: Complemental strand, 20720621 - 20720551
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    |||||| ||||||| |||| |||| |||||||| |  |||||||| | ||||||||| |||||||||||||    
T  20720621 cttgataagagtttgtaaaaaggaggcactcctcactttacaagccggttttgtaaggatgagttagaccc 20720551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 489
Target Start/End: Complemental strand, 48373 - 48316
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||    
T  48373 agtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 48316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 489
Target Start/End: Original strand, 2716385 - 2716442
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||||||||  ||||||| | |||| |||||| ||||||||| |||||||||    
T  2716385 agtttataaagaggagacactcctcaccttataagctggttttgtaaggatgagttag 2716442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 22196655 - 22196558
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || ||  ||  |||||  |||||||||||||||||  ||||| | | | ||||||| | ||||||||| |||||||||    
T  22196655 ggatttagtcccacatcggatagatatgactcttgagaagagtttataaagaggagacactcatcaccgtacaagccggttttgtaaggatgagttag 22196558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 28010230 - 28010121
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||| || || || | |  |||||  |||| | |||||||||| |||||||| | ||||||||| | || | ||||    
T  28010230 ctttgagggggtggatttagtcccacataggatagatagaactcttgagaagagctaataaagaggaggcactcctcaccttacaagccggttatttaag 28010131  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  28010130 aatgagttag 28010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 3762946 - 3763021
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| || | | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  3762946 agagtttataaagaggaggcaatcttcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 3763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 24125102 - 24125177
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||| ||||||||||| | | |||| | ||||||||| | ||||||||| |||||||||||||  |||||||||||    
T  24125102 agagtatataaagaggaggtaatcctcaccttacaagccggttttgtaaggatgagttagaccc-caaatttcaaca 24125177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 432 - 492
Target Start/End: Complemental strand, 24792184 - 24792124
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||||||||||||  ||||||| | | ||||||| | ||||||||| ||||||||||||    
T  24792184 agtttataaagaggagacactcctcaccgtacaagccggttttgtaagaatgagttagacc 24792124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 506
Target Start/End: Original strand, 27760419 - 27760490
Alignment:
Q  434 tttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    |||||||||| || |||||||| | ||| ||||| | ||||||||| |||||||||||||  |||||||||||    
T  27760419 tttataaagaagaggcactcctcaccttccaagccggttttgtaaggatgagttagaccc-caaatttcaaca 27760490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 28156070 - 28156145
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||| |||| |||  |||||||||||    
T  28156070 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgaattaggccc-caaatttcaaca 28156145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 506
Target Start/End: Original strand, 34457343 - 34457418
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| | || | ||||||||| | ||||||||| ||||||||| |||  |||||||||||    
T  34457343 agagtttataaagaggatgcaattctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaaca 34457418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 48116445 - 48116284
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||| |||||||||||||||    
T  48116445 tgcgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccacattggttagataggaagcttgatcagagtttataaagag 48116346  T
Q  445 gaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||  ||||||| | ||||||||| | ||||||||| ||||||||| | | ||| ||||||||    
T  48116345 gacacactcctcaccttacaagccggttttgtaaggatgagttaggctccaaattttcaaca 48116284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 308 - 506
Target Start/End: Complemental strand, 12578649 - 12578449
Alignment:
Q  308 gagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtc------ 401  Q
    |||||||||||||||||||||||||||||        |||||||||| || | ||| |||||||||||||||||||| ||||||||||||||||          
T  12578649 gagggggtgggttggtaattccaccttaat-------tgcgatctgctcctaattgtcttatgttggcttgtctttgagggggtggatttagtcgaattt 12578557  T
Q  402 ----ccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaa 497  Q
        |||||||||||| || ||||||||||| |||||||| |||||||| ||||||||   |||||||   ||||||||||| |||||||||||||  ||    
T  12578556 agtcccacatcggttagataggaagcttgatcagagtttagaaagaggaggcactcctcgccttacaattcgattttgtaaggatgagttagaccc-caa 12578458  T
Q  498 atttcaaca 506  Q
    |||||||||    
T  12578457 atttcaaca 12578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 37272159 - 37272050
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||||||||||||||| || |||  |||||| ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  37272159 ctttgagggggtggatttagtcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 37272060  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  37272059 gatgagttag 37272050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 345 - 489
Target Start/End: Original strand, 12525088 - 12525232
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    |||||| |||||| |||| |||| |||||||||||||||  |||| || |||||||||||||||||||| || ||| |||| || |||||||||||||||    
T  12525088 tgcgatttgcccctagtttccttgtgttggcttgtctttaaggggatgaatttagtcccacatcggttagataggacgcttaataagagtttataaagag 12525187  T
Q  445 gaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
     |  |||||| || ||||||||||  ||||||||| |||||||||    
T  12525188 aagacactccataccttacaagctagttttgtaaggatgagttag 12525232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 43288254 - 43288363
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||| |||||||||||||| || |||  |||||| ||||||||||||||||| |||||||| ||||||||| | | |||||||||    
T  43288254 ctttgagggggtggatttactcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcatcttacaatccggttttgtaag 43288353  T
Q  480 tatgagttag 489  Q
      ||||||||    
T  43288354 ggtgagttag 43288363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 389 - 493
Target Start/End: Complemental strand, 36092704 - 36092600
Alignment:
Q  389 ggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtta 488  Q
    |||| ||||||||||||||||| || || |||  |||||  |||||||||| |||||| |||||||| | ||||||||||| ||||||||| ||||||||    
T  36092704 ggtgtatttagtcccacatcggatagataggattcttgagaagagtttatagagaggaggcactcctcaccttacaagctggttttgtaaggatgagtta 36092605  T
Q  489 gaccc 493  Q
    |||||    
T  36092604 gaccc 36092600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 308 - 489
Target Start/End: Complemental strand, 12518359 - 12518175
Alignment:
Q  308 gagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtc------ 401  Q
    |||||||||||||||||||||||||||||        ||||||||||||| | ||| ||||||||||||| |||||| ||||||||||||||||          
T  12518359 gagggggtgggttggtaattccaccttaat-------tgcgatctgcccctaattgtcttatgttggcttatctttgagggggtggatttagtcggattt 12518267  T
Q  402 ----ccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
        |||||| ||||| || | ||||||||| ||||||||||||||||  ||||||||   |||||||   | ||||||||| |||||||||    
T  12518266 agtcccacattggttagatagaaagcttgatcagagtttataaagagggggcactcctcgccttacaattcggttttgtaaggatgagttag 12518175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 6960080 - 6959971
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||| |||||||||||| || |||  |||||| ||||||||||| ||||| |||||| | | |||||||||||  ||||||||    
T  6960080 ctttgagggggtggatttagttccacatcggttagataggactcttgataagagtttataacgaggaggcactcttcaccttacaagctgggtttgtaag 6959981  T
Q  480 tatgagttag 489  Q
     || ||||||    
T  6959980 gataagttag 6959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 7135357 - 7135248
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||||||||||||||| |||||||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||     
T  7135357 ctttgagggggtggatttagtcacacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaa 7135258  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  7135257 gatgagttag 7135248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 43384382 - 43384285
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| |||||||||    
T  43384382 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 43384285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 507
Target Start/End: Complemental strand, 1661298 - 1661179
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagt 486  Q
    |||||||||||||||||||||||| || ||   |  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||    
T  1661298 ggggtggatttagtcccacatcggatagataaaactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaagaatgagt 1661199  T
Q  487 tagacccaaaaatttcaacag 507  Q
    ||| |||  ||||||||||||    
T  1661198 taggccc-caaatttcaacag 1661179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 506
Target Start/End: Original strand, 8585132 - 8585206
Alignment:
Q  431 gagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||| ||||||||| | ||||||||||| ||||||||| |||||||||||||  |||||||||||    
T  8585132 gagtttataaagagggagcactcctcaccttacaagctggttttgtaaggatgagttagaccc-caaatttcaaca 8585206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 507
Target Start/End: Original strand, 28910022 - 28910148
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||  | || || |||  ||||   ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  28910022 ctttgagggggtggatttagtcccacataagatagataggactcttgggaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 28910121  T
Q  480 tatgagttagacccaaaaatttcaacag 507  Q
     ||||||||| |||  ||||||||||||    
T  28910122 gatgagttag-cccccaaatttcaacag 28910148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 257381 - 257272
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||||||||| || ||   |  |||||  ||||||||||||||||| |||||||| | ||||| ||| | |||||||||    
T  257381 ctttgagggggtggatttagtcccacatcggatagatattattcttgagaagagtttataaagaggaggcactcctcaccttactagccggttttgtaag 257282  T
Q  480 tatgagttag 489  Q
     |||||||||    
T  257281 gatgagttag 257272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 480229 - 480164
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaa 495  Q
    |||||||| |||||||| |||||||| | ||||||||||||||||||||| ||||||| |||||||    
T  480229 agagtttagaaagaggaggcactcctcaccttacaagctgattttgtaaggatgagttggacccaa 480164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 467
Target Start/End: Original strand, 14691031 - 14691149
Alignment:
Q  345 tgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagag 444  Q
    ||||||||||||| ||||||||| ||| ||    ||||||  |||||  |||| ||||||||||||||| || ||| ||||||| |||||||||||||||    
T  14691031 tgcgatctgcccctagttgccttgtgtcgg----tctttgaaggggtaaattttgtcccacatcggttagataggacgcttgataagagtttataaagag 14691126  T
Q  445 gaagcactccttatcttacaagc 467  Q
    ||  ||||||| | |||||||||    
T  14691127 gagacactcctcaccttacaagc 14691149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 489
Target Start/End: Complemental strand, 37531029 - 37530928
Alignment:
Q  388 gggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagtt 487  Q
    |||||||||||||||||| |||| || || |||  |||||  ||||||||||||||||| |||||||| | ||||||||| | ||||| ||| |||||||    
T  37531029 gggtggatttagtcccacgtcggatagataggattcttgagaagagtttataaagaggaggcactcctcaacttacaagccggttttgcaaggatgagtt 37530930  T
Q  488 ag 489  Q
    ||    
T  37530929 ag 37530928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 387 - 506
Target Start/End: Complemental strand, 1663712 - 1663593
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttat-aaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||||||||||||||||||||||| || || | |  |||||  ||||||||| |||||||| |||||||| | ||||||||| | ||||||||| |||||    
T  1663712 ggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaaagaggaggcactcctcaccttacaagccggttttgtaaggatgag 1663613  T
Q  486 ttagacccaaaaatttcaaca 506  Q
    |||| |||  |||||||||||    
T  1663612 ttaggccc-caaatttcaaca 1663593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 392 - 492
Target Start/End: Original strand, 34748780 - 34748880
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagac 491  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| ||| |||| | | ||||||| | ||||||||| |||||||||||    
T  34748780 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtaaggatgagttagac 34748879  T
Q  492 c 492  Q
    |    
T  34748880 c 34748880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 12494550 - 12494464
Alignment:
Q  308 gagggggtgggttggtaattccaccttaaacttgtgatgcgatctgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtc 401  Q
    |||||||||||||||||||||||||||||        ||||||||||||| | ||| ||||||||||||| ||||||  |||||||||||||||    
T  12494550 gagggggtgggttggtaattccaccttaat-------tgcgatctgcccctaattgtcttatgttggcttatctttgacggggtggatttagtc 12494464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 489
Target Start/End: Original strand, 12524499 - 12524636
Alignment:
Q  352 tgccccaagttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcac 451  Q
    |||||| |||| |||| | |||||| ||||||  | |||||||||||| ||||| ||||||| |  ||| ||||||| |||||||||||||||||  |||    
T  12524499 tgcccctagtttccttgtattggctggtctttaagcgggtggatttagccccacgtcggttagacaggacgcttgataagagtttataaagaggagccac 12524598  T
Q  452 tccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||| | |||| ||||   |||| |||| |||||||||    
T  12524599 tcctaaccttataagcctgttttataaggatgagttag 12524636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 27585258 - 27585355
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  |||||||||||| |||| |||||||| | | ||||||| | ||||||||| |||||||||    
T  27585258 ggatttagtcccacatcggatagataggattcttgagaagagtttataaaaaggaggcactcctcaccgtacaagccggttttgtaaggatgagttag 27585355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 47346196 - 47346099
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| | || || |||| |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  47346196 ggatttagtcccacatcagatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttag 47346099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 47346425 - 47346328
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||||||||||||  | || |||| |||||  ||||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  47346425 ggatttagtcccacatcggaaagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttag 47346328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 506
Target Start/End: Complemental strand, 6813174 - 6813067
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaa 497  Q
    ||||||||||||| || || |||  |||||| ||||||||||||||||| |||||||| | || |||||| | |||||| || ||||||||| |||  ||    
T  6813174 agtcccacatcggatagatgggactcttgatgagagtttataaagaggaggcactcctcaactcacaagccggttttgtgaggatgagttaggccc-caa 6813076  T
Q  498 atttcaaca 506  Q
    |||||||||    
T  6813075 atttcaaca 6813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 488
Target Start/End: Complemental strand, 40121732 - 40121624
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||| ||||||||| || || | |  |||||  |||||||||| |||||| |||||||| | | ||||||| | |||||||||    
T  40121732 ctttgagggggtggatttagttccacatcggatagatagtactcttgagaagagtttatagagaggaggcactcctcaccctacaagccggttttgtaag 40121633  T
Q  480 tatgagtta 488  Q
     ||||||||    
T  40121632 gatgagtta 40121624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 9378833 - 9378896
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    ||||||||||||||||| ||| |||||  ||||||||| | ||||||||| |||||||||||||    
T  9378833 agagtttataaagaggaggcaatccttgccttacaagccggttttgtaaggatgagttagaccc 9378896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 491
Target Start/End: Original strand, 19843709 - 19843808
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagac 491  Q
    ||||||||||||| ||| | || || |||  |||||  ||||||||||||||| |||||||||| | | ||||||  ||||||||||| |||||||||||    
T  19843709 ggatttagtcccaaatcagatagataggattcttgagaagagtttataaagagaaagcactcctcaccgtacaagacgattttgtaaggatgagttagac 19843808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 31374805 - 31374868
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagaccc 493  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| |||||||||||||    
T  31374805 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagaccc 31374868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 485
Target Start/End: Original strand, 41670580 - 41670678
Alignment:
Q  387 ggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||| ||||||||||||||||||  || || | |  |||||  ||||||||||||||||| |||||||| | ||||||| ||| ||||||||| |||||    
T  41670580 ggggcggatttagtcccacatcgaatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaaactggttttgtaaggatgag 41670678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 507
Target Start/End: Original strand, 6783078 - 6783154
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaacag 507  Q
    ||||||||||||||||| ||| |||| | ||||||||| | ||||||||| ||||||||| |||  ||||||||||||    
T  6783078 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccc-caaatttcaacag 6783154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 507
Target Start/End: Complemental strand, 35866735 - 35866626
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaa 497  Q
    ||||||||||||| || ||  ||  |||||| |||||||||| |||||  ||| | || | ||||||||| | ||||||||| ||||||||| ||| |||    
T  35866735 agtcccacatcggatagataagactcttgataagagtttatatagagggggcaatactcaacttacaagccggttttgtaaggatgagttaggccccaaa 35866636  T
Q  498 atttcaacag 507  Q
    ||||||||||    
T  35866635 atttcaacag 35866626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 36495891 - 36495988
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  | ||||||||||||||| |||||||| | | ||||||| | ||||||| | |||||||||    
T  36495891 ggatttagtcccacatcggatagataggattcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttag 36495988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 37756040 - 37755979
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactc 453  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||||    
T  37756040 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactc 37755979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 37756266 - 37756205
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactc 453  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||||    
T  37756266 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactc 37756205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 37762014 - 37761953
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactc 453  Q
    ||||||||||||||||||| || || |||| |||||  ||||||||||||||||| ||||||    
T  37762014 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactc 37761953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 43288522 - 43288631
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| |||| ||||||||||  ||||||||||  ||  ||  |||||  ||||||||||||||||| |||||||| | ||||||||| | |||||||||    
T  43288522 ctttgaggggatggatttagtttcacatcggtttgataagactcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 43288621  T
Q  480 tatgagttag 489  Q
     || ||||||    
T  43288622 gattagttag 43288631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 359 - 455
Target Start/End: Original strand, 12524804 - 12524900
Alignment:
Q  359 agttgccttatgttggcttgtctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcct 455  Q
    |||| |||| ||||| ||| |||||  |||||| ||||||||||||||||||||| || ||| |||| || | ||||||||| |||||  |||||||    
T  12524804 agtttccttgtgttgtcttatctttaagggggtagatttagtcccacatcggttagataggacgcttaataaaagtttataaggaggagacactcct 12524900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 488
Target Start/End: Complemental strand, 43168007 - 43167899
Alignment:
Q  380 ctttgcgggggtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaag 479  Q
    ||||| ||||||||||||||||||| ||||| || || | |  |||||  ||||||||||||||||| ||| |||| | ||||  ||| | |||||||||    
T  43168007 ctttgagggggtggatttagtcccaaatcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttatgagccggttttgtaag 43167908  T
Q  480 tatgagtta 488  Q
     ||||||||    
T  43167907 gatgagtta 43167899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 14991573 - 14991514
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| |||||||| | | ||||||  ||||||||||| |||||||||    
T  14991573 agagtttataaagaggaggcactcctcaccgtacaagtcgattttgtaaggatgagttag 14991514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 15421184 - 15421125
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| |||||||| | | ||||||  ||||||||||| |||||||||    
T  15421184 agagtttataaagaggaggcactcctcaccgtacaagtcgattttgtaaggatgagttag 15421125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 506
Target Start/End: Original strand, 23396847 - 23396929
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    |||||| ||||| ||||||||||| ||| || | | ||||||||| | ||||||||| |||||||||||||  |||||||||||    
T  23396847 cttgataagagtatataaagaggaggcaatcatcaacttacaagccggttttgtaaggatgagttagaccc-caaatttcaaca 23396929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 489
Target Start/End: Complemental strand, 36092496 - 36092397
Alignment:
Q  390 gtggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    |||||||||||||||||| || || ||  ||  |||||  |||||||||| |||||| | |||||| | ||||||||| | ||||||||| |||||||||    
T  36092496 gtggatttagtcccacattggatagatatgattcttgagaagagtttatagagaggaggtactcctcaccttacaagccggttttgtaaggatgagttag 36092397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 485
Target Start/End: Original strand, 36237810 - 36237897
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgag 485  Q
    |||||||||| || || || |||  |||||| ||||||||||||||||| ||||||||   ||||||||| | ||||||||| |||||    
T  36237810 agtcccacattggatacataggactcttgataagagtttataaagaggaggcactcctctccttacaagccggttttgtaaggatgag 36237897  T

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Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 40703475 - 40703416
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| |||||||| | || |||||| | ||||||||| |||||||||    
T  40703475 agagtttataaagaggaggcactcctcacctcacaagccggttttgtaaggatgagttag 40703416  T

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Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 506
Target Start/End: Complemental strand, 23821738 - 23821665
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||| ||| | |||| |||||||| || ||||||||| ||||||||| |||  |||||||||||    
T  23821738 agtttataaagaggaggcaattcttaccttacaagttggttttgtaaggatgagttaggccc-caaatttcaaca 23821665  T

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Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 496
Target Start/End: Complemental strand, 44760571 - 44760505
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaa 496  Q
    ||||||||||||||||| |||||||| | ||| |||||   ||||||||| ||||||||| ||||||    
T  44760571 agagtttataaagaggaggcactcctcacctttcaagccagttttgtaaggatgagttaggcccaaa 44760505  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 33909139 - 33909236
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||  |||||||||||||||||  ||||||| |   ||||||| | ||||||| | |||||||||    
T  33909139 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggatacactcctcactgtacaagccggttttgtatggatgagttag 33909236  T

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Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 489
Target Start/End: Complemental strand, 36270572 - 36270475
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||||| || || |||  |||||   ||||||||||||||||  ||||||| | | ||||||| |  |||||||| |||||||||    
T  36270572 ggatttagtcccacatcggatagataggattcttgagacgagtttataaagaggagacactcctcaccgtacaagccggctttgtaaggatgagttag 36270475  T

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Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 453
Target Start/End: Complemental strand, 39550080 - 39550019
Alignment:
Q  392 ggatttagtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactc 453  Q
    ||||||||||||||||||| || || |||  |||||  ||||||||||||||||| ||||||    
T  39550080 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactc 39550019  T

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Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 48114005 - 48114061
Alignment:
Q  398 agtcccacatcggttaaattggaagcttgattagagtttataaagaggaagcactcc 454  Q
    ||||||||||||| || ||  ||  |||||| |||||||||||||||||||||||||    
T  48114005 agtcccacatcggatagataagactcttgataagagtttataaagaggaagcactcc 48114061  T

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Target: scaffold0989 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 3011 - 2936
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacccaaaaatttcaaca 506  Q
    ||||||||||||||||| ||| |||| |  |||||||||| ||||||||| ||||||||| |||  |||||||||||    
T  3011 agagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggatgagttaggccc-caaatttcaaca 2936  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 21327 - 21268
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttag 489  Q
    ||||||||||||||||| ||| |||| | |||||||| || ||||||||| |||||||||    
T  21327 agagtttataaagaggaggcaatcctcaccttacaagttggttttgtaaggatgagttag 21268  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 43760 - 43822
Alignment:
Q  430 agagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||||||||||||||| ||||||| | | ||||| | |||||||||||  |||||||||||    
T  43760 agagtttataaagaggaaacactcctcaccgtacaatccgattttgtaaggttgagttagacc 43822  T

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Target: scaffold1138 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 492
Target Start/End: Complemental strand, 1944 - 1875
Alignment:
Q  423 cttgattagagtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||| ||||||||||  ||||| |||||| | | ||||||||| | ||||||||| ||||||||||||    
T  1944 cttgataagagtttataccgaggaggcactcttcaccttacaagccggttttgtaagcatgagttagacc 1875  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 432 - 492
Target Start/End: Complemental strand, 34567 - 34507
Alignment:
Q  432 agtttataaagaggaagcactccttatcttacaagctgattttgtaagtatgagttagacc 492  Q
    |||||||||||||||  ||||||| | | ||||||| | ||||||||| ||||||||||||    
T  34567 agtttataaagaggagacactcctcaccgtacaagccggttttgtaagaatgagttagacc 34507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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