View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2700_high_20 (Length: 446)

Name: NF2700_high_20
Description: NF2700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2700_high_20
NF2700_high_20
[»] scaffold0343 (1 HSPs)
scaffold0343 (9-257)||(5804-6052)
[»] chr4 (46 HSPs)
chr4 (9-257)||(8255125-8255374)
chr4 (9-257)||(8268543-8268792)
chr4 (285-428)||(8254955-8255098)
chr4 (285-428)||(8268373-8268516)
chr4 (285-428)||(30964369-30964512)
chr4 (285-427)||(4305654-4305796)
chr4 (17-256)||(30964540-30964776)
chr4 (87-247)||(30167378-30167537)
chr4 (87-191)||(8705957-8706061)
chr4 (287-428)||(53823433-53823573)
chr4 (287-428)||(25753101-25753241)
chr4 (296-427)||(31050683-31050812)
chr4 (287-428)||(19815236-19815376)
chr4 (287-404)||(22811172-22811288)
chr4 (308-428)||(2825713-2825831)
chr4 (17-159)||(20464786-20464928)
chr4 (286-428)||(30167575-30167716)
chr4 (128-249)||(4305831-4305951)
chr4 (287-428)||(19673030-19673169)
chr4 (304-428)||(39421042-39421165)
chr4 (287-392)||(21387216-21387321)
chr4 (291-394)||(2061754-2061857)
chr4 (295-369)||(35800476-35800550)
chr4 (287-371)||(46698797-46698881)
chr4 (287-357)||(49747526-49747596)
chr4 (287-345)||(6599957-6600015)
chr4 (296-345)||(38637253-38637302)
chr4 (285-345)||(36962626-36962685)
chr4 (301-345)||(39041300-39041344)
chr4 (17-72)||(27555673-27555727)
chr4 (17-72)||(36689547-36689601)
chr4 (287-346)||(38929837-38929896)
chr4 (301-404)||(48098285-48098388)
chr4 (296-346)||(16501741-16501791)
chr4 (291-385)||(19311359-19311451)
chr4 (307-345)||(40813813-40813851)
chr4 (91-163)||(35341157-35341229)
chr4 (310-346)||(53756766-53756802)
chr4 (287-334)||(2792286-2792333)
chr4 (93-163)||(2825974-2826044)
chr4 (124-193)||(19673259-19673329)
chr4 (91-192)||(31050478-31050580)
chr4 (312-345)||(37707392-37707425)
chr4 (287-391)||(12296140-12296244)
chr4 (301-341)||(26474851-26474891)
chr4 (296-332)||(41117988-41118024)
[»] chr3 (47 HSPs)
chr3 (87-257)||(47235796-47235966)
chr3 (23-257)||(53247998-53248233)
chr3 (285-428)||(20611711-20611854)
chr3 (87-257)||(20611881-20612050)
chr3 (28-257)||(34475511-34475737)
chr3 (32-257)||(45163953-45164178)
chr3 (296-428)||(2392527-2392659)
chr3 (296-428)||(2394274-2394406)
chr3 (285-428)||(19176431-19176573)
chr3 (88-257)||(2392320-2392489)
chr3 (88-257)||(2394084-2394253)
chr3 (286-428)||(34475765-34475907)
chr3 (97-247)||(17551065-17551210)
chr3 (88-257)||(31482982-31483150)
chr3 (87-256)||(19176602-19176772)
chr3 (285-428)||(23328360-23328501)
chr3 (17-257)||(43012474-43012716)
chr3 (296-428)||(45163777-45163915)
chr3 (296-395)||(9584074-9584173)
chr3 (296-428)||(40023593-40023723)
chr3 (347-428)||(47235644-47235725)
chr3 (87-194)||(30352254-30352359)
chr3 (285-359)||(43012372-43012446)
chr3 (285-376)||(45398776-45398867)
chr3 (87-219)||(9583868-9583999)
chr3 (287-386)||(14193910-14194009)
chr3 (91-257)||(23328167-23328332)
chr3 (290-428)||(37123311-37123448)
chr3 (285-345)||(17550968-17551028)
chr3 (296-428)||(25647613-25647744)
chr3 (287-370)||(14879421-14879504)
chr3 (289-346)||(33143963-33144020)
chr3 (296-401)||(14755286-14755389)
chr3 (91-194)||(40023389-40023493)
chr3 (287-349)||(47945713-47945775)
chr3 (288-341)||(39021289-39021342)
chr3 (287-345)||(5556581-5556639)
chr3 (308-372)||(31482868-31482932)
chr3 (307-346)||(20710740-20710779)
chr3 (287-345)||(30127273-30127332)
chr3 (287-357)||(1652898-1652968)
chr3 (288-382)||(31424210-31424304)
chr3 (287-428)||(823447-823587)
chr3 (296-345)||(24099348-24099397)
chr3 (287-394)||(30935402-30935509)
chr3 (87-163)||(7105032-7105109)
chr3 (287-428)||(27398887-27399027)
[»] chr5 (32 HSPs)
chr5 (17-257)||(18593341-18593581)
chr5 (285-428)||(34378026-34378169)
chr5 (94-257)||(34378196-34378359)
chr5 (285-428)||(698289-698432)
chr5 (285-428)||(18593171-18593314)
chr5 (102-255)||(698461-698614)
chr5 (9-257)||(29087580-29087825)
chr5 (285-428)||(29087409-29087552)
chr5 (296-428)||(7392052-7392183)
chr5 (23-220)||(7161762-7161962)
chr5 (287-428)||(8297397-8297537)
chr5 (287-428)||(13954246-13954385)
chr5 (46-246)||(18313414-18313614)
chr5 (287-404)||(14302442-14302559)
chr5 (296-429)||(33258903-33259035)
chr5 (287-427)||(7195251-7195389)
chr5 (297-429)||(25991935-25992066)
chr5 (287-349)||(22675336-22675398)
chr5 (290-356)||(23426344-23426410)
chr5 (306-356)||(26045995-26046045)
chr5 (286-371)||(24072277-24072362)
chr5 (296-344)||(39184208-39184256)
chr5 (299-394)||(31721639-31721734)
chr5 (296-345)||(8730928-8730977)
chr5 (287-380)||(17854079-17854172)
chr5 (295-341)||(21402857-21402903)
chr5 (303-346)||(12046265-12046308)
chr5 (287-346)||(27713079-27713138)
chr5 (287-370)||(39024462-39024545)
chr5 (301-343)||(28765628-28765670)
chr5 (23-72)||(34378384-34378432)
chr5 (87-127)||(7451601-7451641)
[»] chr2 (39 HSPs)
chr2 (88-247)||(17116693-17116853)
chr2 (17-247)||(10524208-10524437)
chr2 (285-428)||(39338875-39339018)
chr2 (87-257)||(39338679-39338848)
chr2 (304-428)||(10524025-10524149)
chr2 (285-428)||(7874221-7874362)
chr2 (285-378)||(387151-387244)
chr2 (297-427)||(14106546-14106675)
chr2 (17-191)||(387338-387515)
chr2 (285-393)||(14405162-14405269)
chr2 (91-257)||(7874390-7874554)
chr2 (94-194)||(14106342-14106443)
chr2 (287-373)||(1269466-1269552)
chr2 (91-194)||(7460836-7460940)
chr2 (298-428)||(17105340-17105470)
chr2 (287-346)||(22885145-22885204)
chr2 (287-345)||(4471934-4471992)
chr2 (287-349)||(16959989-16960051)
chr2 (287-348)||(13337282-13337343)
chr2 (91-194)||(5254416-5254515)
chr2 (296-346)||(15126431-15126481)
chr2 (296-346)||(33788653-33788703)
chr2 (297-403)||(37770663-37770769)
chr2 (287-356)||(10173590-10173659)
chr2 (297-378)||(23650363-23650444)
chr2 (296-345)||(25504930-25504979)
chr2 (307-347)||(9560820-9560860)
chr2 (299-394)||(31902438-31902533)
chr2 (307-345)||(4162052-4162090)
chr2 (92-193)||(10173398-10173499)
chr2 (287-344)||(2062901-2062958)
chr2 (287-348)||(34230209-34230270)
chr2 (285-349)||(5254263-5254327)
chr2 (287-335)||(7695984-7696032)
chr2 (299-394)||(18681027-18681122)
chr2 (362-400)||(7695932-7695970)
chr2 (302-355)||(27739976-27740029)
chr2 (28-72)||(22888645-22888688)
chr2 (288-332)||(42048229-42048273)
[»] chr7 (55 HSPs)
chr7 (285-428)||(41089758-41089901)
chr7 (17-257)||(44353306-44353547)
chr7 (285-428)||(38306189-38306332)
chr7 (88-257)||(37795087-37795256)
chr7 (17-220)||(31971877-31972080)
chr7 (87-254)||(47325698-47325865)
chr7 (285-428)||(3419666-3419809)
chr7 (17-247)||(38306369-38306599)
chr7 (285-428)||(47325895-47326038)
chr7 (287-430)||(10244109-10244251)
chr7 (87-257)||(5860101-5860271)
chr7 (285-428)||(3867044-3867187)
chr7 (285-428)||(5860298-5860441)
chr7 (17-257)||(3419398-3419638)
chr7 (287-428)||(33435038-33435178)
chr7 (20-257)||(3867215-3867451)
chr7 (304-428)||(25160743-25160867)
chr7 (88-247)||(10244290-10244449)
chr7 (285-428)||(37794928-37795060)
chr7 (127-257)||(33435208-33435337)
chr7 (296-386)||(6584879-6584969)
chr7 (287-428)||(16954582-16954722)
chr7 (32-257)||(25160911-25161133)
chr7 (287-403)||(16828948-16829064)
chr7 (17-162)||(40726247-40726392)
chr7 (296-428)||(34389891-34390022)
chr7 (296-427)||(3478282-3478412)
chr7 (304-399)||(42533281-42533376)
chr7 (285-427)||(35745837-35745977)
chr7 (287-428)||(6716748-6716888)
chr7 (287-402)||(1320748-1320863)
chr7 (17-192)||(3419139-3419314)
chr7 (287-404)||(8745105-8745222)
chr7 (287-404)||(24324810-24324927)
chr7 (319-428)||(44755556-44755663)
chr7 (287-345)||(13311850-13311908)
chr7 (94-257)||(41089569-41089730)
chr7 (106-191)||(35745654-35745740)
chr7 (302-372)||(38485540-38485610)
chr7 (287-393)||(47457034-47457140)
chr7 (299-348)||(9349757-9349806)
chr7 (287-371)||(11379139-11379223)
chr7 (91-193)||(6585043-6585146)
chr7 (287-346)||(12480896-12480955)
chr7 (104-194)||(34390122-34390213)
chr7 (307-345)||(27993568-27993606)
chr7 (299-368)||(46133302-46133371)
chr7 (287-350)||(1820014-1820077)
chr7 (295-334)||(44353584-44353623)
chr7 (311-345)||(25153231-25153265)
chr7 (307-345)||(46262151-46262189)
chr7 (298-345)||(9428128-9428175)
chr7 (310-344)||(17802851-17802885)
chr7 (307-345)||(35206725-35206763)
chr7 (304-373)||(23983179-23983247)
[»] chr8 (48 HSPs)
chr8 (17-257)||(20138524-20138765)
chr8 (285-428)||(9519427-9519570)
chr8 (17-255)||(24995137-24995376)
chr8 (285-428)||(24995405-24995548)
chr8 (285-428)||(32066305-32066448)
chr8 (285-428)||(34389015-34389158)
chr8 (88-257)||(31207176-31207345)
chr8 (295-428)||(36630765-36630898)
chr8 (91-257)||(9519597-9519764)
chr8 (17-247)||(12898018-12898247)
chr8 (87-257)||(37986671-37986841)
chr8 (88-257)||(34388821-34388988)
chr8 (285-428)||(37986868-37987011)
chr8 (285-408)||(31207372-31207494)
chr8 (98-257)||(32066119-32066278)
chr8 (87-248)||(41893215-41893375)
chr8 (287-428)||(10248565-10248705)
chr8 (295-393)||(15821399-15821497)
chr8 (285-377)||(16457471-16457562)
chr8 (87-257)||(16457288-16457444)
chr8 (23-141)||(36631038-36631156)
chr8 (155-256)||(22773598-22773699)
chr8 (87-166)||(35821429-35821508)
chr8 (301-379)||(12898300-12898378)
chr8 (287-373)||(17657014-17657100)
chr8 (287-394)||(30236140-30236247)
chr8 (287-356)||(15906686-15906755)
chr8 (87-155)||(22773815-22773883)
chr8 (299-378)||(10552247-10552325)
chr8 (94-149)||(35816066-35816121)
chr8 (286-345)||(41893411-41893470)
chr8 (287-332)||(32945715-32945760)
chr8 (295-334)||(20138448-20138487)
chr8 (17-72)||(32066026-32066080)
chr8 (299-357)||(35062456-35062514)
chr8 (287-360)||(12198081-12198154)
chr8 (287-360)||(12442509-12442582)
chr8 (301-346)||(23264716-23264761)
chr8 (287-331)||(3679471-3679515)
chr8 (296-356)||(17720727-17720786)
chr8 (9-72)||(9519791-9519853)
chr8 (125-255)||(15821230-15821359)
chr8 (17-72)||(27889131-27889185)
chr8 (17-72)||(27947789-27947843)
chr8 (307-346)||(40531242-40531281)
chr8 (307-345)||(33967337-33967375)
chr8 (156-254)||(36630939-36631036)
chr8 (91-163)||(38577606-38577679)
[»] chr1 (50 HSPs)
chr1 (17-256)||(24449672-24449912)
chr1 (285-428)||(41920381-41920523)
chr1 (285-428)||(31585770-31585913)
chr1 (28-257)||(46692573-46692802)
chr1 (287-428)||(5389433-5389574)
chr1 (285-428)||(30685914-30686057)
chr1 (17-247)||(5459269-5459499)
chr1 (17-257)||(5389165-5389404)
chr1 (296-428)||(24449951-24450083)
chr1 (285-428)||(46692829-46692972)
chr1 (124-257)||(31585609-31585743)
chr1 (285-428)||(24684488-24684630)
chr1 (87-257)||(41920550-41920725)
chr1 (296-428)||(9313310-9313441)
chr1 (296-428)||(24658859-24658989)
chr1 (285-413)||(46814477-46814604)
chr1 (297-428)||(20113543-20113674)
chr1 (304-413)||(7857597-7857705)
chr1 (17-257)||(30685666-30685887)
chr1 (286-380)||(5459137-5459231)
chr1 (118-239)||(6764225-6764346)
chr1 (285-393)||(27031850-27031958)
chr1 (301-414)||(34774814-34774925)
chr1 (291-373)||(6583232-6583314)
chr1 (287-371)||(17033571-17033655)
chr1 (287-404)||(27102142-27102260)
chr1 (87-156)||(6804739-6804808)
chr1 (287-428)||(16147484-16147624)
chr1 (287-346)||(19598646-19598705)
chr1 (23-133)||(24684240-24684350)
chr1 (287-373)||(32864573-32864659)
chr1 (296-346)||(38544759-38544809)
chr1 (91-194)||(7857813-7857915)
chr1 (295-348)||(27905420-27905473)
chr1 (302-394)||(4651742-4651834)
chr1 (287-345)||(15840924-15840982)
chr1 (17-131)||(31584781-31584894)
chr1 (302-344)||(42374175-42374217)
chr1 (94-194)||(24659089-24659189)
chr1 (302-343)||(42374049-42374090)
chr1 (301-345)||(30655571-30655615)
chr1 (89-136)||(32882585-32882632)
chr1 (297-339)||(9081527-9081569)
chr1 (307-345)||(17891522-17891560)
chr1 (295-345)||(22200019-22200069)
chr1 (151-257)||(24684355-24684460)
chr1 (93-194)||(27031660-27031761)
chr1 (93-194)||(46814286-46814388)
chr1 (312-341)||(18787241-18787270)
chr1 (296-345)||(46603403-46603452)
[»] chr6 (23 HSPs)
chr6 (285-428)||(16510311-16510454)
chr6 (17-222)||(10541965-10542170)
chr6 (285-428)||(3117420-3117564)
chr6 (87-247)||(3117601-3117761)
chr6 (88-214)||(14663218-14663344)
chr6 (296-428)||(20701824-20701955)
chr6 (287-428)||(32935351-32935491)
chr6 (296-370)||(9224027-9224101)
chr6 (315-428)||(3880623-3880735)
chr6 (298-346)||(26216042-26216090)
chr6 (298-357)||(26534742-26534801)
chr6 (298-399)||(12794071-12794173)
chr6 (287-340)||(13423482-13423535)
chr6 (301-357)||(21266112-21266168)
chr6 (301-341)||(34105428-34105468)
chr6 (310-345)||(7546464-7546499)
chr6 (287-332)||(33968625-33968670)
chr6 (287-331)||(32316393-32316437)
chr6 (301-345)||(34090374-34090418)
chr6 (337-427)||(15132585-15132673)
chr6 (287-345)||(34092806-34092864)
chr6 (18-106)||(3254207-3254295)
chr6 (309-345)||(12129228-12129264)
[»] scaffold0068 (2 HSPs)
scaffold0068 (285-428)||(35782-35925)
scaffold0068 (87-257)||(35588-35755)
[»] scaffold0050 (1 HSPs)
scaffold0050 (296-428)||(36636-36767)
[»] scaffold0200 (1 HSPs)
scaffold0200 (287-373)||(19366-19452)
[»] scaffold0119 (1 HSPs)
scaffold0119 (287-373)||(42150-42236)
[»] scaffold0063 (1 HSPs)
scaffold0063 (287-428)||(58056-58196)
[»] scaffold1613 (1 HSPs)
scaffold1613 (296-346)||(1038-1088)
[»] scaffold0172 (1 HSPs)
scaffold0172 (92-159)||(19113-19177)
[»] scaffold0620 (2 HSPs)
scaffold0620 (301-345)||(3841-3885)
scaffold0620 (287-345)||(8140-8198)
[»] scaffold0062 (1 HSPs)
scaffold0062 (297-394)||(47055-47152)


Alignment Details
Target: scaffold0343 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 6052 - 5804
Alignment:
Q  9 acatcatcaccacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaaagactccnnnnnnncaagcactgtaaacacggtatc 108  Q
    ||||||| ||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||| |       ||||||| ||||||| ||||||    
T  6052 acatcataaccacctaaaaacacctctgaagataaaccccacaaaaacacatcaccacctaaaaagacttcaaaaaaacaagcaccgtaaacatggtatc 5953  T
Q  109 caccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacaccta 208  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  5952 caccacctcccatcatcactactcacccacaaaaaacaccctcaaaataaaactcccagatcccaacacccaagctgagccacattacgaagagcaccta 5853  T
Q  209 accaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||| |||||||||||||||||||||||||| |||||||| |||| ||||    
T  5852 accgaaggatcaagtagctatcacaaaccttgcgacctccgatctaccg 5804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 8255374 - 8255125
Alignment:
Q  9 acatcatcaccacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn-caagcactgtaaacacggta 106  Q
    ||||||| ||||| |||| |||| ||||||||||||| | || |||||||||||||| |||||| |||||||        |||||||||||||||| |||    
T  8255374 acatcataaccacctaaaaacactcctgaagataaactc-acaaaaacacatcaccacctaaaacagactccaaataaaacaagcactgtaaacacagta 8255276  T
Q  107 tccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacc 206  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||| ||||    
T  8255275 tccaccacatcccatcgtcactactcacccacaaagaacaccctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacc 8255176  T
Q  207 taaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||  | |||||||| |||||||||||||||||||||||| |||||||||    
T  8255175 taactgatggatcaagcagctatcacaaacctcgcgacctccgatccaccg 8255125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 8268792 - 8268543
Alignment:
Q  9 acatcatcaccacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn-caagcactgtaaacacggta 106  Q
    ||||||| ||||| |||| |||| ||||||||||||| | || |||||||||||||| |||||| |||||||        |||||||||||||||| |||    
T  8268792 acatcataaccacctaaaaacactcctgaagataaactc-acaaaaacacatcaccacctaaaacagactccaaataaaacaagcactgtaaacacagta 8268694  T
Q  107 tccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacc 206  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||| ||||    
T  8268693 tccaccacatcccatcgtcactactcacccacaaagaacaccctcaaaataaaactcacagaccctaacacccaagctgagccacattacgaagagcacc 8268594  T
Q  207 taaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||  | |||||||| |||||||||||||||||||||||| |||||||||    
T  8268593 taactgatggatcaagcagctatcacaaacctcgcgacctccgatccaccg 8268543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 8255098 - 8254955
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8255098 ccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgcccccggtac 8254999  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||| ||||||||||| ||||||||    
T  8254998 accagagaaaaaccaaatcaagtgaaacaaagattacagctaga 8254955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 8268516 - 8268373
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8268516 ccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgcccccggtac 8268417  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||| ||||||||||| ||||||||    
T  8268416 accagagaaaaaccaaatcaagtgaaacaaagattacagctaga 8268373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 30964512 - 30964369
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||| || |||    
T  30964512 ccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgccctcggtac 30964413  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  30964412 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 30964369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 285 - 427
Target Start/End: Complemental strand, 4305796 - 4305654
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| || ||||||| |||    
T  4305796 ccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcaccgcttgcccccggtac 4305697  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctag 427  Q
    || |||||||||| ||||| |||||||||||||||||| ||||    
T  4305696 accagagaaaaacgaaatccagtcaaacaaagattgcaactag 4305654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 30964776 - 30964540
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn-caagcactgtaaacacggtatccaccac 114  Q
    ||||| |||| |||| |||| |||||||||| ||||||||||||||||| |||||| |||||||        || |||||||||| ||| ||| ||||||    
T  30964776 accacctaaaaacactcctggagataaaccc-accaaaacacatcaccacctaaaacagactccaaaaaaatcacgcactgtaaatacgatattcaccac 30964678  T
Q  115 ctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaa 214  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||     | ||||||||| | |||||||| |||||| ||||||||| ||    
T  30964677 cgcccatcatcactactcacccacaaagaacaccctcaaaataaaactcccag----taccacccaagcagggccacatttcgaagagcacctaaccgaa 30964582  T
Q  215 ggatcaagtagctatcacaaacctcgcgacctctgatccacc 256  Q
     ||||| | |||||||||||||||||||||||| || |||||    
T  30964581 tgatcatgcagctatcacaaacctcgcgacctccgaaccacc 30964540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 30167378 - 30167537
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    ||||||||||||||||||||||||||||| || | | |||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||| ||     
T  30167378 caagcactgtaaacacggtatccaccaccgccaa-cgtcaccactcacccacaaagaacaccctcaaaataaaactcccataccccaacacccaagttgg 30167476  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctc 247  Q
    |||||||| |||||| | | ||||| |||| ||| | |||||||| |||||||||||||||    
T  30167477 gccacatttcgaagagcgcttaaccgaagggtcatgcagctatcataaacctcgcgacctc 30167537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 8705957 - 8706061
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||||||||||| |||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  8705957 caagcactgtaaacacagtatccaccactgcccatcgtcactacccacccacaaagaacaccctcaaaataaaactcttagaccccaacacccaagctga 8706056  T
Q  187 gccac 191  Q
    |||||    
T  8706057 gccac 8706061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 53823433 - 53823573
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||| || ||| |||||    
T  53823433 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacac 53823532  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| ||||| ||||| ||| | |||||||||| ||||    
T  53823533 cagagaaacaccaagtcaagccaagc-aagattgcagttaga 53823573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 25753241 - 25753101
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||| ||  |||||| |||| || ||| |||||    
T  25753241 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacctccggtacac 25753142  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| |||| |||| | ||||| |||||||||||||||    
T  25753141 cagagaaacaccacatcacgccaaac-aagattgcagctaga 25753101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 427
Target Start/End: Original strand, 31050683 - 31050812
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    |||||| || ||| ||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||| ||||  | || ||     
T  31050683 caaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctcgcccccggtacatcaaag-aac 31050781  T
Q  396 accaaatcaagtcaaacaaagattgcagctag 427  Q
    |||| |||||||||||| | ||||||||||||    
T  31050782 accatatcaagtcaaac-aggattgcagctag 31050812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 19815236 - 19815376
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||| |||||||||| |||||| |||||||||||||||||||| ||||||  || |||||||||||| |||||| |  ||    
T  19815236 aacttgagccaaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaac 19815335  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||| ||| || | |||||| ||||| |||||||||||||||    
T  19815336 cagaaaaatacaatatcaagccaaac-aagattgcagctaga 19815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 22811172 - 22811288
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||||||||||||||||||||||||| |||| ||||||| |||||||||||||  ||||||| || ||||||| ||||  |||||||||||    
T  22811172 aacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctc-accccgatacac 22811270  T
Q  387 tagagaaaaaccaaatca 404  Q
     ||||||| |||||||||    
T  22811271 cagagaaacaccaaatca 22811288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 428
Target Start/End: Complemental strand, 2825831 - 2825713
Alignment:
Q  308 tcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatcaagt 407  Q
    ||||||||||||||||||| ||||||| ||||| |||||||| ||||||| ||||| ||||||||||||| || ||||| |||| || |||| |||||||    
T  2825831 tcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccctcgccctcggtacaccagag-aacaccatatcaagt 2825733  T
Q  408 caaacaaagattgcagctaga 428  Q
    ||||| | |||||||||||||    
T  2825732 caaac-atgattgcagctaga 2825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 20464928 - 20464786
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||||||||||||||||| ||||| | ||||||||| |||||| | ||| |       ||| | |||||||||||||||||||||||    
T  20464928 accacctaaaaacacccctgaagataaaccc-accaacatacatcaccacctaaaacaaacttcaaaaaaacaaaccctgtaaacacggtatccaccacc 20464830  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaa 159  Q
     |||||| ||||||||||||| |||| |||||||||||||||||    
T  20464829 gcccatcgtcactactcacccccaaataacaccctcaaaataaa 20464786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 428
Target Start/End: Original strand, 30167575 - 30167716
Alignment:
Q  286 caacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgataca 385  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||  ||||  |||| || ||||||||  ||||||||||||||  |||||  |||    
T  30167575 caacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccacttgactataataccaaataggcagggcacccctc-accccggcaca 30167673  T
Q  386 ctagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
      | |||||| | ||||||| |||||||||||||| |||||||    
T  30167674 tcaaagaaaacctaaatcaaatcaaacaaagattgtagctaga 30167716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 128 - 249
Target Start/End: Complemental strand, 4305951 - 4305831
Alignment:
Q  128 tactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagct 227  Q
    |||||||||||||||| |||||| |||||||||||| || | || || ||||||| ||||||||||| |||||| ||||| ||| |||||||| | || |    
T  4305951 tactcacccacaaagatcaccctgaaaataaaactcccaaacccaaatacccaagttgagccacatt-cgaagagcacctcaccgaaggatcatgcagtt 4305853  T
Q  228 atcacaaacctcgcgacctctg 249  Q
    ||||||||||| ||||||||||    
T  4305852 atcacaaaccttgcgacctctg 4305831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 19673169 - 19673030
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||| |||||||||| ||||| ||  ||||||||||||||||| ||||||  || |||||||||||| ||||||||  ||    
T  19673169 aacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcacccccgatcaac 19673071  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| | || |||||| ||||| |||||||||||||||    
T  19673070 cagagaaatatcatatcaagccaaac-aagattgcagctaga 19673030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 428
Target Start/End: Original strand, 39421042 - 39421165
Alignment:
Q  304 tgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatc 403  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||  |||| || || |||||||||||| ||| |  |||| |||||||| ||||||||    
T  39421042 tgactcccgatctcgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacaccaaatc 39421141  T
Q  404 aagtcaaacaaagattgcagctaga 428  Q
    | | ||||| |||||||||||||||    
T  39421142 acgccaaac-aagattgcagctaga 39421165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 21387216 - 21387321
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||| || |||| |  |||| |||||||| |||    
T  21387216 aacttgaatcgaagaactgacttccgatctcgaatcaaaagtgatcggtccaccagactccagcaccaaatcagaagggtattcctcacccccgatccac 21387315  T
Q  387 tagaga 392  Q
     |||||    
T  21387316 cagaga 21387321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 2061754 - 2061857
Alignment:
Q  291 tgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactaga 390  Q
    |||| |||||||||||||| | |||||||||||||||||||| | |||||||||||||| | ||||| |  |||||||||||| ||  |||||||| |||    
T  2061754 tgatccaaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccctcaccttcgatacaccaga 2061853  T
Q  391 gaaa 394  Q
    ||||    
T  2061854 gaaa 2061857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 35800550 - 35800476
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacc 369  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||||||||| || ||||||| || ||||||||    
T  35800550 tcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcagaagggcacc 35800476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 46698797 - 46698881
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccc 371  Q
    |||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||||  || ||||||| || ||||||||||    
T  46698797 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcacccc 46698881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 49747596 - 49747526
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaat 357  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||||||  ||||||||||||| |||||||    
T  49747596 aacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaat 49747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 6599957 - 6600015
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||| ||||||||| ||||||||||||| ||||||||| |||||| ||||||||||    
T  6599957 aacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagact 6600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 38637253 - 38637302
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  38637253 caaagaattgactcccgatctcgaatcaaaagtgatcggcccgccagact 38637302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 36962626 - 36962685
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||| ||||| ||||||||||    
T  36962626 ccaacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggcccaccagact 36962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 39041300 - 39041344
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  39041300 aactgactcctgatctcgaatcaaaagtgatcggcccaccagact 39041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 27555673 - 27555727
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  27555673 accacctaaaaacacccctgaagataaa-cccaccaaaacacatcaccacctaaaa 27555727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 36689547 - 36689601
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    ||||| |||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  36689547 accacttaaaaacacccctgaagataaactc-accaaaacacatcaccatctaaaa 36689601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 38929896 - 38929837
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||  ||||||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  38929896 aacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagactt 38929837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 48098388 - 48098285
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaa 400  Q
    |||||||||||||||||||| |||||||||| || ||| | | |||||  ||||||| || |||||||| ||| ||| || |||||  |||||| |||||    
T  48098388 aactgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccctcggtacacctgagaaacaccaa 48098289  T
Q  401 atca 404  Q
    ||||    
T  48098288 atca 48098285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 16501791 - 16501741
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||| ||||||||||||||||||||||||| |||||| |||||| ||||    
T  16501791 caaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaactt 16501741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 19311359 - 19311451
Alignment:
Q  291 tgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgataca 385  Q
    |||| |||| |||||||||||| ||||||||||||||||||||  ||||||||| |||  ||||||| || ||| |||||||| |||||| ||||    
T  19311359 tgatccaaataactgactcccg-tctcgaatcaaaagtgatcgacccaccagac-ttaaaaccaaatcagaaggacacccctcacccccgttaca 19311451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 40813813 - 40813851
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagact 40813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 35341157 - 35341229
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaaca-ccctcaaaataaaactc 163  Q
    |||||||||||| |||||| | ||| |||||| ||||||||||||| || |||||| |||||||||||||||||    
T  35341157 cactgtaaacacagtatccgcaaccacccatcgtcactactcaccc-cagagaacacccctcaaaataaaactc 35341229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 53756802 - 53756766
Alignment:
Q  310 ccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    ||||||||||||||||||||||||| |||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagactt 53756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 2792286 - 2792333
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcgg 334  Q
    ||||||| ||||  |||||||| |||||||||||||||||||||||||    
T  2792286 aacttgagtcaagaaactgacttccgatctcgaatcaaaagtgatcgg 2792333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 2826044 - 2825974
Alignment:
Q  93 ctgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaaca-ccctcaaaataaaactc 163  Q
    |||||||| | |||||||| || ||||||| ||||||||||||| || |||||| |||||||||||||||||    
T  2826044 ctgtaaacgcagtatccacaacgtcccatcgtcactactcaccc-cagagaacacccctcaaaataaaactc 2825974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 19673329 - 19673259
Alignment:
Q  124 tcactactcacccacaaagaacac-cctcaaaataaaactctcagatcccaacacccaagctgagccacat 193  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||  | ||||||| ||| | ||||||||    
T  19673329 tcactactcacccccaaagaacactcctcaaaattaaactctcagtcctcaacaccaaagtttagccacat 19673259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 31050478 - 31050580
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaaca-ccctcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    ||||||||||||   |||||||| |  ||||| ||||||||||||| ||| ||||| |||||||||||||||   ||||   ||||||||||||| ||||    
T  31050478 cactgtaaacacaacatccaccatcatccatcgtcactactcacccccaaggaacacccctcaaaataaaacagccagacttcaacacccaagcttagcc 31050577  T
Q  190 aca 192  Q
    |||    
T  31050578 aca 31050580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 345
Target Start/End: Original strand, 37707392 - 37707425
Alignment:
Q  312 gatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||||||||||||||||||| ||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccaccagact 37707425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 12296244 - 12296140
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||||||||||||   |||||||||||||||| | ||||  |||||||||| || ||||||  ||  ||||||||||  |||||| | |||    
T  12296244 aacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagacttcaggaccaaaccagaggggcaccccttacccccggtccac 12296145  T
Q  387 tagag 391  Q
    |||||    
T  12296144 tagag 12296140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 26474891 - 26474851
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccacca 341  Q
    |||| |||| |||||||||||||||||||||||| ||||||    
T  26474891 aactaactctcgatctcgaatcaaaagtgatcggcccacca 26474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 41117988 - 41118024
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatc 332  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  41117988 caaagaacttacttccgatctcgaatcaaaagtgatc 41118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 47235966 - 47235796
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  47235966 caagcactgtaaacacggtatccaccaccgtccatcgtcactactcacccacaaagaacaccctcaaaataaaactcgcagaccccaacacccaagctga 47235867  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
     ||||||| |||||| ||||||||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  47235866 accacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctctgatccaccg 47235796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 53248233 - 53247998
Alignment:
Q  23 taaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccat 121  Q
    |||| ||| |||||||||||| |||||| |||||||||||||| |||||| |||||||       |||||||||||||||||||| |||||||| |||||    
T  53248233 taaaaacaaccctgaagataa-ccccacaaaaacacatcaccacctaaaacagactccaaaaaaacaagcactgtaaacacggtaaccaccaccgcccat 53248135  T
Q  122 catcactactcacccacaaagaacaccctcaaaat-aaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatca 220  Q
    | |||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||| |||||| ||| ||||| ||||||||    
T  53248134 cgtcactactcacccacaaagaacactctcaaaataaaaactctcagaccccaacacccaaactgagccacatttcgaagagcacataaccgaaggatca 53248035  T
Q  221 agtagctatcacaaacctcgcgacctctgatccaccg 257  Q
       | ||||||||||||||||||||||  ||||||||    
T  53248034 tacaactatcacaaacctcgcgacctccaatccaccg 53247998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 20611854 - 20611711
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||| | |||||||||||||||||||||||||||||||| ||||||| ||| || ||| |||||| ||||||||||||||||||||||||||| |||    
T  20611854 ccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctcgcccccggtac 20611755  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  20611754 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 20611711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 20612050 - 20611881
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||||    
T  20612050 caagcactgtaaacacagtatccaccatcgcccatcgtcactactcacccacaaagaacaccctcagaataaaactcctaga-cccaacacccaagctga 20611952  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    | |||||| |||||| ||||||||| ||||||||   |||||||||||||||||||||||| |||||||||    
T  20611951 gtcacatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctccgatccaccg 20611881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 34475511 - 34475737
Alignment:
Q  28 acacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccatcatca 126  Q
    ||||||||| |||||||| | ||||||||||||||||| |||||| |||||||       |||||| |||||||||||||||||||||| |||||| |||    
T  34475511 acacccctggagataaactc-accaaaacacatcaccacctaaaacagactccaaaaaa-caagcaatgtaaacacggtatccaccaccgcccatcgtca 34475608  T
Q  127 ctactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagc 226  Q
    |||||||||||||||||||||||| |||  |||||||||| | ||||||||| |||||||| |||||| |||||| ||||||||| ||||||||   |||    
T  34475609 ctactcacccacaaagaacacccttaaa--aaaactctcataccccaacacctaagctgagtcacatttcgaagagcacctaaccgaaggatcatacagc 34475706  T
Q  227 tatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||||||||||||||||||  ||||||||    
T  34475707 tatcacaaacctcgcgacctccaatccaccg 34475737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 32 - 257
Target Start/End: Complemental strand, 45164178 - 45163953
Alignment:
Q  32 ccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccatcatcactac 130  Q
    ||||| |||||||||| ||||||||||||||||| |||||| |||||||       |||||| |||||||||||||| || |||| |||||| ||||||     
T  45164178 ccctggagataaaccc-accaaaacacatcaccacctaaaatagactccaaagaaacaagcattgtaaacacggtattcatcaccgcccatcgtcactaa 45164080  T
Q  131 tcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagctatc 230  Q
    ||||| ||||| |||||||||||||||||||||  ||| ||||||||||||||| ||||||||| |||||| ||||||||| |||||||| | |||||||    
T  45164079 tcacctacaaataacaccctcaaaataaaactcctagaccccaacacccaagctaagccacatttcgaagagcacctaaccgaaggatcatgcagctatc 45163980  T
Q  231 acaaacctcgcgacctctgatccaccg 257  Q
    |||||| ||| |||||| |||||||||    
T  45163979 acaaacttcgtgacctccgatccaccg 45163953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 2392527 - 2392659
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||| |||    
T  2392527 caaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgcccccggtacaccagagtaaa 2392626  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||||| ||||||||||||||||||||||||||    
T  2392627 accaaaccaagtcaaacaaagattgcagctaga 2392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 2394274 - 2394406
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||| |||    
T  2394274 caaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgcccccggtacaccagagtaaa 2394373  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||||| ||||||||||||||||||||||||||    
T  2394374 accaaaccaagtcaaacaaagattgcagctaga 2394406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 19176573 - 19176431
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| | |||| |||    
T  19176573 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggca-ccctcactcccggtac 19176475  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    |  ||||||||||||||| |||||||||||||||||||||||||    
T  19176474 atcagagaaaaaccaaattaagtcaaacaaagattgcagctaga 19176431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 88 - 257
Target Start/End: Original strand, 2392320 - 2392489
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||  |||||||||||||  ||| ||||||||||||||||||    
T  2392320 aagcactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaataacacctacaaaataaaactcctagaccccaacacccaagctgag 2392419  T
Q  188 ccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||||  |||||   ||||||| |||||||| | ||||| |||||||||||||||||| |||||||||    
T  2392420 ccacattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccgatccaccg 2392489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 88 - 257
Target Start/End: Original strand, 2394084 - 2394253
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||  |||||||||||||  ||| ||||||||||||||||||    
T  2394084 aagcactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaataacacctacaaaataaaactcctagaccccaacacccaagctgag 2394183  T
Q  188 ccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||||  |||||   ||||||| |||||||| | ||||| |||||||||||||||||| |||||||||    
T  2394184 ccacattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccgatccaccg 2394253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 286 - 428
Target Start/End: Original strand, 34475765 - 34475907
Alignment:
Q  286 caacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgataca 385  Q
    |||||| |||| ||||  ||||||||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||||| ||||    
T  34475765 caacttaattccaagatttgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgcccccggtaca 34475864  T
Q  386 ctagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    | ||||||||| |||| ||||||||||||| ||||||||||||    
T  34475865 ccagagaaaaatcaaaccaagtcaaacaaaaattgcagctaga 34475907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 97 - 247
Target Start/End: Complemental strand, 17551210 - 17551065
Alignment:
Q  97 aaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattac 196  Q
    ||||| |||| |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |    
T  17551210 aaacaaggtaaccaccaccgcccatcgtcactactcaccgacaaagaacaccctcaaaataaaactctcagaccccaacacccaaactgagccacatttc 17551111  T
Q  197 gaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctc 247  Q
    ||||| |||||||||     |||| | ||||||||||||||||||||||||    
T  17551110 gaagagcacctaacc-----atcatgcagctatcacaaacctcgcgacctc 17551065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 88 - 257
Target Start/End: Complemental strand, 31483150 - 31482982
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    ||||| |||||||| ||||||||||||    |||| |||||||| |||||||||||||||||| |||| |||||||||| | ||||||||| ||||||||    
T  31483150 aagcaatgtaaacatggtatccaccactgttcatcgtcactactaacccacaaagaacacccttaaaa-aaaactctcaaaccccaacacctaagctgag 31483052  T
Q  188 ccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||||| |||||| ||||||||| |||||||| | ||||||||||||||||||||||||  ||||||||    
T  31483051 ccacatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccaatccaccg 31482982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 87 - 256
Target Start/End: Complemental strand, 19176772 - 19176602
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    ||||||| |||||||| ||||||||||||  ||||| |||||||||||||  ||||||||||||||||||||||| | |||| ||| |||||||||||||    
T  19176772 caagcacagtaaacacagtatccaccaccatccatcgtcactactcacccctaaagaacaccctcaaaataaaacacccagaccccgacacccaagctga 19176673  T
Q  187 gccacattacgaagaacacctaacc--aaaggatcaagtagctatcacaaacctcgcgacctctgatccacc 256  Q
    ||||||||||||||| ||||| |||  ||||||||| | ||||  ||| ||||| |||||||| ||||||||    
T  19176672 gccacattacgaagagcacctgaccgaaaaggatcatgcagcttccac-aaccttgcgacctccgatccacc 19176602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 23328360 - 23328501
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||||||  |||| | || |||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||||| |||    
T  23328360 ccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctcgcccccggtac 23328459  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||| || |||| ||||||||||||||| ||||||||||||    
T  23328460 accagag-aacaccatatcaagtcaaacaaa-attgcagctaga 23328501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 43012716 - 43012474
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn---caagcactgtaaacacggtatccacc 112  Q
    ||||| |||| |||| |||||||| |||||| ||||||| |||||||||||||||| |||||||          |||||| |||||||||||||||||||    
T  43012716 accacctaaaaacactcctgaagaaaaaccc-accaaaagacatcaccatctaaaacagactccttcacaaaaacaagcattgtaaacacggtatccacc 43012618  T
Q  113 acctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaacca 212  Q
     ||  |||||  |||||||||||  ||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||| |||||| ||||| |||     
T  43012617 cccgtccatcgccactactcacctccaaagaacaccctcaaattaaaactcctagaccccaacacccaagctgagccacatttcgaagagcacctgaccg 43012518  T
Q  213 aaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    || ||||| | | ||  ||| |||||||||||||||||| |||||    
T  43012517 aacgatcatgcaacttccac-aacctcgcgacctctgattcaccg 43012474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 296 - 428
Target Start/End: Complemental strand, 45163915 - 45163777
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccacc--agactttagtaccaaattagcagggcacccctcgcccccgataca----ctag 389  Q
    |||| |||||||| | ||||||||||||||||||||||| ||||   ||||| ||||||||||||||||||||||||||||||| || ||||    ||||    
T  45163915 caaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggcacccctcgccctcggtacatgcactag 45163816  T
Q  390 agaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  45163815 agaaaaatcaaaccaagtcaaacaaagattgcagctaga 45163777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 296 - 395
Target Start/End: Original strand, 9584074 - 9584173
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcaccc-ctcgcccccgatacactagagaaa 394  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||| ||||| |||||||    
T  9584074 caaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccctctc-cccccggtacacaagagaaa 9584172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 40023593 - 40023723
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||  || |||| ||||||||| |||||||||||| |||||||||| ||     
T  40023593 caaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggca-ccctcgcccccggtacactagag-aac 40023690  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||| |||||||||||  | |||||||||||||    
T  40023691 accatatcaagtcaaaacatgattgcagctaga 40023723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 347 - 428
Target Start/End: Complemental strand, 47235725 - 47235644
Alignment:
Q  347 tagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  47235725 tagtcccaaattagcagggcacccctcgcccccggtacactggagaaaaaccaaaccaagtcaaacaaagattgcagctaga 47235644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 30352254 - 30352359
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||  ||| |||||||  ||| |||||||||||||||||    
T  30352254 caagtactgtaaacacggtatccaccaccacccatcgtcactactcatccacaaagaacaccct--aaaaaaaactccgagaccccaacacccaagctga 30352351  T
Q  187 gccacatt 194  Q
    ||||||||    
T  30352352 gccacatt 30352359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 43012446 - 43012372
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaatta 359  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  43012446 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaatta 43012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 376
Target Start/End: Complemental strand, 45398867 - 45398776
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcc 376  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||    
T  45398867 ccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccctcgcc 45398776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 9583868 - 9583999
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    ||||||| ||||||||| ||||||||||| || ||| ||||||||||||  ||||||||| |||||||||||||||| |||| ||||| |||||||| ||    
T  9583868 caagcaccgtaaacacgatatccaccaccgcctatcgtcactactcaccg-caaagaacatcctcaaaataaaactcccagaccccaaaacccaagcaga 9583966  T
Q  187 gccacattacgaagaacacctaaccaaaggatc 219  Q
    |||||| | |||||| | ||| ||| |||||||    
T  9583967 gccacaattcgaagagcgcctgaccgaaggatc 9583999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 386
Target Start/End: Complemental strand, 14194009 - 14193910
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| || |||||||||||| | |||| |||||    
T  14194009 aacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccctcactcccggtacac 14193910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 23328167 - 23328332
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacacc-ctcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    |||||||| |||  ||||||| ||| |||||| ||||||||||||| ||||||||||| ||||||||||||||| ||||   ||||||||||||||||||    
T  23328167 cactgtaagcacaatatccacaaccacccatcgtcactactcacccccaaagaacaccactcaaaataaaactcccagacttcaacacccaagctgagcc 23328266  T
Q  190 acattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||| |||| | | ||||||| || || |||| ||||  ||| |||||| ||||||| |||||||||    
T  23328267 acatt-cgaaaagctcctaaccgaatgaacaaggagcttccac-aacctctcgacctccgatccaccg 23328332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 428
Target Start/End: Complemental strand, 37123448 - 37123311
Alignment:
Q  290 ttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactag 389  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| |||||| | ||||| ||||||  |  |||||||||||| ||  || ||||  ||    
T  37123448 ttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcag 37123349  T
Q  390 agaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||| ||||||||| | |||||||| ||||||||||||    
T  37123348 agaaacaccaaatcacgccaaacaaa-attgcagctaga 37123311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 17551028 - 17550968
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17551028 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 17550968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 428
Target Start/End: Complemental strand, 25647744 - 25647613
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||  |||||||||||||||||||||||||| || ||  |||||||||| ||||||| || ||||||||| || | |||| ||||| |||||||     
T  25647744 caaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcactcccggtacaccagagaaac 25647645  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||||| | |||||| | ||||||||||||    
T  25647644 accaaatcacgccaaacaga-attgcagctaga 25647613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 14879504 - 14879421
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcaccc 370  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||||||| ||| ||| || |||||||||    
T  14879504 aacttgatccaacgaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 33143963 - 33144020
Alignment:
Q  289 cttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33143963 cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactt 33144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 401
Target Start/End: Original strand, 14755286 - 14755389
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |||  |  |||||||||||| ||  || ||||| |||||||     
T  14755286 caaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttagcacaaaa--aaaagggcacccctcaccttcggtacaccagagaaac 14755383  T
Q  396 accaaa 401  Q
    ||||||    
T  14755384 accaaa 14755389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 40023389 - 40023493
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    ||||||||||||||||||||| |||  ||||| |||||||||| ||  ||||||| ||| |||||||||||||| ||||   |||||||| |||||||||    
T  40023389 cactgtaaacacggtatccacaaccatccatcgtcactactcatcccaaaagaacgcccctcaaaataaaactcccagactacaacaccctagctgagcc 40023488  T
Q  190 acatt 194  Q
    |||||    
T  40023489 acatt 40023493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 47945775 - 47945713
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttag 349  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  47945775 aacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttag 47945713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 39021289 - 39021342
Alignment:
Q  288 acttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccacca 341  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  39021289 acttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 5556639 - 5556581
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  5556639 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagact 5556581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 31482932 - 31482868
Alignment:
Q  308 tcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccct 372  Q
    ||||||||||||||||||||||||| | || ||||||| ||| |||||||||| |||| ||||||    
T  31482932 tcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattagtagggtacccct 31482868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 346
Target Start/End: Original strand, 20710740 - 20710779
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 20710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 30127332 - 30127273
Alignment:
Q  287 aacttgattcaa-agaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||||||  |||||||||    
T  30127332 aacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 1652898 - 1652968
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaat 357  Q
    |||||||  ||||||||| ||||| ||||||||||||||||||||||| |||| ||| || || |||||||    
T  1652898 aacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaat 1652968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 382
Target Start/End: Complemental strand, 31424304 - 31424210
Alignment:
Q  288 acttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgat 382  Q
    |||||| |||||| |||||||||||||||||||||||||| || ||| | |||||||| |   | ||||| || | |||||||||| ||||||||    
T  31424304 acttgaatcaaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagactctgaaaacaaatcagtaaggcacccctcacccccgat 31424210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 823447 - 823587
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||||||| |||  || ||| |  |||||||| | ||||||||| |  ||| || | |||    
T  823447 aacttgaatgaaacaactgactctcgatctcgaatcaaaagtgatcggcccattagtcttcataaccaaatttgaagggcaccctttacccacggtccac 823546  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| |||| | |||| ||||| ||||||||| |||||    
T  823547 cagagaaacaccataacaagccaaac-aagattgcaactaga 823587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 24099348 - 24099397
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||| |||||| ||||||| ||||||||||||||||||| ||||||||||    
T  24099348 caaaaaactgattcccgatatcgaatcaaaagtgatcggcccaccagact 24099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 30935402 - 30935509
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||| |||| ||||||||||| |||||||||| |||| | |||||| |||| |  ||||||| || |||||||||||  |||||| | |||    
T  30935402 aacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccccttacccccggtccac 30935501  T
Q  387 tagagaaa 394  Q
     |||||||    
T  30935502 cagagaaa 30935509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 7105109 - 7105032
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaag-aaca-ccctcaaaataaaactc 163  Q
    |||||||| |||| || |||||||||||| |||||| ||||||||||||| ||||| |||| |||| ||||||||||||    
T  7105109 caagcactataaaaacagtatccaccaccacccatcgtcactactcaccc-caaagaaacaccccttaaaataaaactc 7105032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 27399027 - 27398887
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||| |||||||||| || |||||||| |||| ||| |  |||||||||||| | |||||| ||| ||||||||| || | || | | |||    
T  27399027 aacttgaaccaaataactgactcctgacctcgaatctaaagcgattgtgccaccagactttcggaccaaaatagaagggcacccatctcgcctggtccac 27398928  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||||||| |||| | | || ||||| ||||||| |||||||    
T  27398927 tagagaaacaccatagccagccaaac-aagattgtagctaga 27398887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 8e-62; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 18593581 - 18593341
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| ||||||||||||||||||||  |||||||||||||||| |||| | | |||||       |||||||||||||||||||||||||||||    
T  18593581 accacctaaaaacacccctgaagataaacccg-ccaaaacacatcaccacctaacacaaactccaaaaaaacaagcactgtaaacacggtatccaccacc 18593483  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
     |||||| ||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||| |||    
T  18593482 gcccatcgtcactactcacccacaaagaacatcctccaaataaaactcccagaccccaacacccaagttgagccacatttcgaagaacacctaaccgaag 18593383  T
Q  216 gatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||| | | |||||||||| ||||||||||| || ||||||    
T  18593382 gatcatgcacctatcacaaatctcgcgacctccgaaccaccg 18593341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 34378169 - 34378026
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||    
T  34378169 ccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactccttgcccccggtac 34378070  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||| ||||||||||||||||||||||||||||||||    
T  34378069 accagagaaaacccaaatcaagtcaaacaaagattgcagctaga 34378026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 94 - 257
Target Start/End: Complemental strand, 34378359 - 34378196
Alignment:
Q  94 tgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacat 193  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34378359 tgtaaacacggtatccaccaccgtccatcgtcactactcacccacaaagaacaccctcaaaataaaactctcaaaccccaacacccaagctgagccacat 34378260  T
Q  194 tacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||||| || |||||| |||||||||  | |||||||||||||||||||||| | |||||||    
T  34378259 tacgaagagcatctaaccgaaggatcaaacaactatcacaaacctcgcgacctccggtccaccg 34378196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 698432 - 698289
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||    
T  698432 ccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccctcgcccccggtac 698333  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || ||||||||||||||||||||||||||||||||||| |||||    
T  698332 accagagaaaaaccaaatcaagtcaaacaaagattgcaactaga 698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 18593314 - 18593171
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| | |||| | ||| ||| ||||||||||||||||| |||||||||||| |||    
T  18593314 ccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcgcccccggtac 18593215  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || ||||||||||||||||||||||||||||||||||| |||||    
T  18593214 acgagagaaaaaccaaatcaagtcaaacaaagattgcaactaga 18593171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 698614 - 698461
Alignment:
Q  102 cggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaaga 201  Q
    |||||||||||| | || ||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||    
T  698614 cggtatccaccatcgccgatcgtcactactcacccacaaagaacaccctccaaataaaactctcagaccccaacacccaagctgagccacatttcaaaga 698515  T
Q  202 acacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccac 255  Q
     ||||||||| |||||| | | |||||||||||||||||| |||||||| ||||    
T  698514 gcacctaaccgaaggattatgcagctatcacaaacctcgcaacctctgaaccac 698461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 29087825 - 29087580
Alignment:
Q  9 acatcatcaccacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtat 107  Q
    ||||||| ||||| |||| ||| |||||||||||||||| |||||||||||||| || |||||| |||||||       |||||||||||||||||||||    
T  29087825 acatcataaccacctaaaaacaaccctgaagataaaccc-accaaaacacatcagcacctaaaacagactccaaaaaaacaagcactgtaaacacggtat 29087727  T
Q  108 ccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacct 207  Q
     ||||||| |||||| |||||||||||||  |||||| |||||||||||||| ||| |||| ||||||| | ||| ||||||||| |||||||| |||||    
T  29087726 tcaccaccgcccatcgtcactactcacccctaaagaa-accctcaaaataaagctcccagaccccaacatctaagttgagccaca-tacgaagagcacct 29087629  T
Q  208 aaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
     |||||||||||| | ||||| ||  |||||||||||||| |||||||||    
T  29087628 gaccaaaggatcatggagctacca-taacctcgcgacctccgatccaccg 29087580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 29087552 - 29087409
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||| |||||| |||||||||||||||| |||    
T  29087552 ccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaaatagcagagcacccctcgcccccggtac 29087453  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    |  ||||||  |||||| ||||||||||||||||||||||||||    
T  29087452 aacagagaattaccaaaacaagtcaaacaaagattgcagctaga 29087409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 7392052 - 7392183
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| ||| || ||||  |||||||     
T  7392052 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaac 7392151  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||||||| ||||| |||||||||||||||    
T  7392152 accaaatcaagccaaac-aagattgcagctaga 7392183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 7161762 - 7161962
Alignment:
Q  23 taaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn---caagcactgtaaacacggtatccaccacctcc 118  Q
    |||| ||||||||||| |||||||| ||||||||||||||| | |||||| |||||||          ||||||||||||||||| | ||||||||| ||    
T  7161762 taaaaacacccctgaatataaaccc-accaaaacacatcactacctaaaacagactccttcacaaaaacaagcactgtaaacacgatttccaccaccacc 7161860  T
Q  119 catcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggat 218  Q
    || | ||||||||||||| ||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||  |||||||||||| ||||||||||    
T  7161861 caacgtcactactcacccccaaagaacaccatcaaaataaaactcccagaccccaacacacaagctgagccacatatcgaagaacacctgaccaaaggat 7161960  T
Q  219 ca 220  Q
    ||    
T  7161961 ca 7161962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 8297537 - 8297397
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||||||||||||||||||| | ||  | ||||||  |||||| ||||||| || |||||||||||| ||| || |||||    
T  8297537 aacttgagccaaagaactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccctcggtacac 8297438  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||||||| |||||||||||  ||||||| ||||||||||||    
T  8297437 tagagaaacaccaaatcaagcaaaacaaa-attgcagctaga 8297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 13954246 - 13954385
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||| | ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || | |||||||||| ||  || |||||    
T  13954246 aacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag-aaggcacccctcaccttcggtacac 13954344  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| || |||||||||||||  |||||||||||||||    
T  13954345 cagagaaacacaaaatcaagtcaaa-taagattgcagctaga 13954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 18313414 - 18313614
Alignment:
Q  46 cccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaa 144  Q
    |||||||||||||||||||| |||||| |||||||       ||| ||| ||||||||| |||||| |||| | |||| ||||||||||||||  |||||    
T  18313414 cccaccaaaacacatcaccacctaaaacagactccaaaaaaacaaacaccgtaaacacgatatccatcaccactcatcgtcactactcacccatgaagaa 18313513  T
Q  145 caccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgac 244  Q
    |||||| || | |||||||  | |||| || |||||| || ||||||||| |||||| ||||||| | || ||||| | |||||||||||||||||||||    
T  18313514 caccctaaaga-aaaactccaaaatcctaaaacccaaactaagccacatttcgaagagcacctaaacgaatgatcatgcagctatcacaaacctcgcgac 18313612  T
Q  245 ct 246  Q
    ||    
T  18313613 ct 18313614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 14302442 - 14302559
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||||  || |||||| ||||| ||| ||||||||    
T  14302442 aacttgctccaaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctcgatacac 14302541  T
Q  387 tagagaaaaaccaaatca 404  Q
     ||||||| |||| ||||    
T  14302542 cagagaaacaccagatca 14302559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 296 - 429
Target Start/End: Original strand, 33258903 - 33259035
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||||  || ||| |||||||| ||  || ||||| |||||||     
T  33258903 caaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcaccttcggtacaccagagaaac 33259002  T
Q  396 accaaatcaagtcaaacaaagattgcagctagat 429  Q
    ||||||||  | ||||| ||||||| ||||||||    
T  33259003 accaaatcgcgccaaac-aagattgtagctagat 33259035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 427
Target Start/End: Original strand, 7195251 - 7195389
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||   |||||| || ||||||||||||  ||| | |||||    
T  7195251 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctc-accctggtacac 7195349  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctag 427  Q
     ||||||| || |||||| | ||||| || |||||||||||    
T  7195350 cagagaaacactaaatcacgccaaac-aatattgcagctag 7195389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 429
Target Start/End: Complemental strand, 25992066 - 25991935
Alignment:
Q  297 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaa 396  Q
    ||||||||||||| ||||||||||||||||| ||| || |||||||||||||| |||||| ||| ||||||| ||||  |  || ||||| ||| ||| |    
T  25992066 aaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaaatagaagggcactcctcatcttcggtacaccagaaaaaca 25991967  T
Q  397 ccaaatcaagtcaaacaaagattgcagctagat 429  Q
     ||||||  ||||||| ||||||||||||||||    
T  25991966 tcaaatcgtgtcaaac-aagattgcagctagat 25991935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 22675336 - 22675398
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttag 349  Q
    |||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  22675336 aacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttag 22675398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 23426410 - 23426344
Alignment:
Q  290 ttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaa 356  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| || ||||||    
T  23426410 ttgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagacttcaggaccaaa 23426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 26045995 - 26046045
Alignment:
Q  306 actcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaa 356  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  26045995 actcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaa 26046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 24072277 - 24072362
Alignment:
Q  286 caacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccc 371  Q
    ||||||||  ||||||||||||| |||||||| ||||||||| |||| | | |||||||||||| ||||||| || ||||||||||    
T  24072277 caacttgaaccaaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcacccc 24072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 39184208 - 39184256
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagac 344  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  39184208 caaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagac 39184256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 394
Target Start/End: Complemental strand, 31721734 - 31721639
Alignment:
Q  299 agaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaa 394  Q
    ||||||||||||||||||||||||||||| |||||| |||  |||||| || |||| || || |||||||||||  |||||| | ||| |||||||    
T  31721734 agaactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttacccccggtccaccagagaaa 31721639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 8730977 - 8730928
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  8730977 caaagaactgactcccgatctcgaattaaaagcgataggtccaccagact 8730928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 17854079 - 17854172
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccg 380  Q
    |||||||  |||| || |||||||||||||||| ||||||| | |||| |||||| |||| |  |||||||||| |||||||||||| ||||||    
T  17854079 aacttgaaccaaataattgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccg 17854172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 21402857 - 21402903
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcggtccacca 341  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||    
T  21402857 tcaaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 12046308 - 12046265
Alignment:
Q  303 ctgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||    
T  12046308 ctgagtcccgatctcgaatcaaaagtgatcggcccaccaaactt 12046265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 27713138 - 27713079
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||  ||||||||||| |||||||||||||||||||  |||||| |||| ||||||    
T  27713138 aacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagactt 27713079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 370
Target Start/End: Original strand, 39024462 - 39024545
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcaccc 370  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||| |  |||||| |||| || ||||| | || |||||||||    
T  39024462 aacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggcaccc 39024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 343
Target Start/End: Original strand, 28765628 - 28765670
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccaga 343  Q
    ||||||||| ||||||||||||||||||||||  |||||||||    
T  28765628 aactgactctcgatctcgaatcaaaagtgatcaatccaccaga 28765670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 34378432 - 34378384
Alignment:
Q  23 taaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    |||| ||||||||||||||||| ||||| |||||||||||||| ||||||    
T  34378432 taaaaacacccctgaagataaa-cccacaaaaacacatcaccacctaaaa 34378384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 7451641 - 7451601
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcac 127  Q
    ||||||||| |||||||||||||||||||| ||||| ||||    
T  7451641 caagcactgcaaacacggtatccaccaccttccatcgtcac 7451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 8e-62; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 88 - 247
Target Start/End: Original strand, 17116693 - 17116853
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaa-ctctcagatcccaacacccaagctga 186  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  17116693 aagcactgtaaacacggtatccaccaccgcccatcgtcattactcacccacaaagaacaccctcaaaataaaaactctcagaccccaacacccaagctga 17116792  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctc 247  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||    
T  17116793 gccacattacgaagagcacctaaccgatggatcaagtagatatcacaaacctcgcgacctc 17116853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 10524437 - 10524208
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||||||||||||||||| |||||||||| ||||| ||||||| | |||||       ||||||| |||||||||||||||||||||    
T  10524437 accacctaaaaacacccctgaagataaaccc-accaaaacacgtcaccgtctaaaacaaactccaaaaaa-caagcaccgtaaacacggtatccaccacc 10524340  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
     |||||| |||||||||||||||||||||||||||| ||||||||||| || | ||||||||||||||||||||||||  |||||| ||||||||| |||    
T  10524339 gcccatcgtcactactcacccacaaagaacaccctccaaataaaactcccaaaccccaacacccaagctgagccacatatcgaagagcacctaaccgaag 10524240  T
Q  216 gatcaagtagctatcacaaacctcgcgacctc 247  Q
    ||||| | ||||||||||||||||||||||||    
T  10524239 gatcatgcagctatcacaaacctcgcgacctc 10524208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 39338875 - 39339018
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||    
T  39338875 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccccggtac 39338974  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || | |||||||||||||||||||||||||| ||||||||||||    
T  39338975 accaaagaaaaaccaaatcaagtcaaacaaatattgcagctaga 39339018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 39338679 - 39338848
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    ||||||||||||||| | ||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  39338679 caagcactgtaaacaag-tatccaccatcgcccatcgtcactactcacccacaaagaacaccctcaaaataaaactcccagacctcaacacccaagctga 39338777  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    | |||| | |||||| ||||||||| ||||||||   |||||||||||||||||||||||| |||||||||    
T  39338778 gtcacaattcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctccgatccaccg 39338848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 304 - 428
Target Start/End: Complemental strand, 10524149 - 10524025
Alignment:
Q  304 tgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatc 403  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||||||| |||||||||  || || ||||||||||||||||    
T  10524149 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggcacctctcgcccccagtagaccagagaaaaaccaaatc 10524050  T
Q  404 aagtcaaacaaagattgcagctaga 428  Q
    ||||||||||||||||||| |||||    
T  10524049 aagtcaaacaaagattgcaactaga 10524025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 7874362 - 7874221
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||||| |||||||||||| |||||| || |||    
T  7874362 ccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccatcgccctcggtac 7874263  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||| || |||| |||||||||| | | |||||||||||||    
T  7874262 actagag-aacaccatatcaagtcaagc-aggattgcagctaga 7874221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 387244 - 387151
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccc 378  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  387244 ccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccctcgcccc 387151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 427
Target Start/End: Original strand, 14106546 - 14106675
Alignment:
Q  297 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaa 396  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||  | ||||  |||| || |    
T  14106546 aaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaaca 14106645  T
Q  397 ccaaatcaagtcaaacaaagattgcagctag 427  Q
    |||||||||||||||| | ||||||||||||    
T  14106646 ccaaatcaagtcaaac-aggattgcagctag 14106675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 387515 - 387338
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn---caagcactgtaaacacggtatccacc 112  Q
    ||||| |||| |||||| ||||||||||||| ||||||||||||||||| |||||| |||||||          |||||| |||||||||   || ||||    
T  387515 accacttaaaaacacccatgaagataaaccc-accaaaacacatcaccacctaaaacagactccttcacaaaaacaagcattgtaaacacaaaattcacc 387417  T
Q  113 acctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccac 191  Q
    ||| |||||| |||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  387416 accgcccatcgtcactattcacccccaaagaacaccctcaaaataaaactcccagaccccaacacccaagctgagccac 387338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 14405269 - 14405162
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||  |||||||||||||||| |||    
T  14405269 ccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcatca-agcacccctcgcccccggtac 14405171  T
Q  385 actagagaa 393  Q
    || ||||||    
T  14405170 accagagaa 14405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 7874554 - 7874390
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaaca-ccctcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||| ||||||||| |||||||||||||||||  |||   ||||||||||||||||||    
T  7874554 cactgtaaacacagtatccacaaccacccatcgtcactactcaccc-caaagaacatccctcaaaataaaactccaagacttcaacacccaagctgagcc 7874456  T
Q  190 acattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||| |||| | | |||||||||| || ||||||| |  ||| |||||| ||||||| |||||||||    
T  7874455 acatt-cgaaaagctcctaaccaaatgaacaagtagtttccac-aacctctcgacctccgatccaccg 7874390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 14106342 - 14106443
Alignment:
Q  94 tgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactctcagatcccaacacccaagctgagccaca 192  Q
    ||||||||| |||||||| ||| | |||| ||||||||||||| |||||||||||| |||||||||||||||||||   |||||||||||||||||||||    
T  14106342 tgtaaacacagtatccacaaccactcatcgtcactactcacccccaaagaacacccctcaaaataaaactctcagacttcaacacccaagctgagccaca 14106441  T
Q  193 tt 194  Q
    ||    
T  14106442 tt 14106443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 1269552 - 1269466
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctc 373  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| || |||| || ||||||||||||    
T  1269552 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctc 1269466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 7460940 - 7460836
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    ||||||||||||  ||||||| ||| | |||| |||||||||| || |||||||||||| |||||||||||||| ||||   ||||||||||||||||||    
T  7460940 cactgtaaacacaatatccacaaccacacatcgtcactactcaaccccaaagaacacccctcaaaataaaactcccagacttcaacacccaagctgagcc 7460841  T
Q  190 acatt 194  Q
    |||||    
T  7460840 acatt 7460836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 428
Target Start/End: Complemental strand, 17105470 - 17105340
Alignment:
Q  298 aagaactgactcccgatctcgaatcaaaa-gtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaa 396  Q
    |||| |||| || |||||||||||||||| |||||||| ||| ||||||| |||||||||| || |||||||||||| |||| | ||||| | ||||| |    
T  17105470 aagatctgattctcgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaaca 17105371  T
Q  397 ccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || ||| ||||||||| ||| |||||||||||    
T  17105370 cctaattaagtcaaac-aaggttgcagctaga 17105340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 22885145 - 22885204
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22885145 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 22885204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 4471992 - 4471934
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  4471992 aacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagact 4471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 16960051 - 16959989
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttag 349  Q
    |||||||  |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  16960051 aacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttag 16959989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 13337343 - 13337282
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagacttta 348  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||    
T  13337343 aacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagacttta 13337282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 5254515 - 5254416
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaaca-ccctcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||  ||||||||| |||||||   ||||||||||||   |||||||||| |||||||    
T  5254515 cactgtaaacacagtatccacaaccacccatcgtcactactcacc--caaagaacacccctcaa---aaaactctcagacttcaacacccaaactgagcc 5254421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 15126431 - 15126481
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  15126431 caaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagactt 15126481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 33788653 - 33788703
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  33788653 caaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagactt 33788703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 403
Target Start/End: Original strand, 37770663 - 37770769
Alignment:
Q  297 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaa 396  Q
    |||||| ||||||| ||||  ||||||||||||||||| |||||| || |||| ||||||| ||  ||||||||||| ||| || ||||| ||||||| |    
T  37770663 aaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaaaca 37770762  T
Q  397 ccaaatc 403  Q
    | |||||    
T  37770763 ctaaatc 37770769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 10173590 - 10173659
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaa 356  Q
    |||||||  |||| |||| ||| ||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  10173590 aacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaa 10173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 23650444 - 23650363
Alignment:
Q  297 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccc 378  Q
    |||||| |||||||||||||||||||||||| |||| | |||||||||| ||| ||||||| || | || ||||||| ||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaataagtaaggtacccctcacccc 23650363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 25504930 - 25504979
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  25504930 caaagaactgactcccgatctcgaattaaaagcgataggtccaccagact 25504979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 9560820 - 9560860
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagacttt 347  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccaccaaacttt 9560860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 394
Target Start/End: Original strand, 31902438 - 31902533
Alignment:
Q  299 agaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaa 394  Q
    ||||||||||||||||||||||| ||||| ||| || ||||||||||| || | ||||| || ||| |||||||  |||||| | ||| |||||||    
T  31902438 agaactgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaaggacacccctaacccccggtccaccagagaaa 31902533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 4162052 - 4162090
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagact 4162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 10173398 - 10173499
Alignment:
Q  92 actgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacac-cctcaaaataaaactctcagatcccaacacccaagctgagcca 190  Q
    |||||||| ||| ||| || |||| | |||| ||||||||||||| ||||||| || ||||||||| ||||||||||  | ||||||| |||||||||||    
T  10173398 actgtaaaaacgatatacaacaccactcatcgtcactactcaccc-caaagaatactcctcaaaattaaactctcagtcctcaacaccaaagctgagcca 10173496  T
Q  191 cat 193  Q
    |||    
T  10173497 cat 10173499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 2062958 - 2062901
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagac 344  Q
    |||||||  |||||| |||||||||||||||||||||||||  ||||| |||||||||    
T  2062958 aacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 34230270 - 34230209
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagacttta 348  Q
    |||||||| ||||||||||||||| |||||||||| |||| ||||||| ||| || ||||||    
T  34230270 aacttgatccaaagaactgactcctgatctcgaataaaaaatgatcggcccatcaaacttta 34230209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 5254327 - 5254263
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttag 349  Q
    |||||||||  |||||| | ||||||||||||| ||| |||||||||||| |||| |||||||||    
T  5254327 ccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagactttag 5254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 7696032 - 7695984
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggt 335  Q
    |||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  7696032 aacttgagccaaagaactgactcccggtatcgaatcaaaagtgatcggt 7695984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 394
Target Start/End: Complemental strand, 18681122 - 18681027
Alignment:
Q  299 agaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaa 394  Q
    ||||||||||||||||||||||||||| |  ||||| |||||| |||| |  ||||||| || ||||||  |||  |||||| | |||||||||||    
T  18681122 agaactgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataaccaaatcagaagggcagtccttacccccggtccactagagaaa 18681027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 400
Target Start/End: Complemental strand, 7695970 - 7695932
Alignment:
Q  362 agggcacccctcgcccccgatacactagagaaaaaccaa 400  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  7695970 agggcacccctcacccccgatacactagagaaacaccaa 7695932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 27740029 - 27739976
Alignment:
Q  302 actgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaa 355  Q
    |||||||| |||||| |||||||||| |||||| ||||||||||| || |||||    
T  27740029 actgactctcgatcttgaatcaaaagcgatcggcccaccagacttcaggaccaa 27739976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 22888645 - 22888688
Alignment:
Q  28 acacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||    
T  22888645 acacccctgaagataaa-cccaccaaaacgcatcaccacctaaaa 22888688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 42048229 - 42048273
Alignment:
Q  288 acttgattcaaagaactgactcccgatctcgaatcaaaagtgatc 332  Q
    |||||| ||||| ||||| |||||| |||||||||||||||||||    
T  42048229 acttgagtcaaaaaactggctcccggtctcgaatcaaaagtgatc 42048273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 3e-61; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 41089758 - 41089901
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41089758 ccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccctcgcccccgatac 41089857  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || ||||||||||||||||||||||||||||||||| |||||||    
T  41089858 accagagaaaaaccaaatcaagtcaaacaaagattgtagctaga 41089901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 44353306 - 44353547
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||| || |||||||||| ||||||||||||||||| |||||| |||||||       |||||||||||||||||||||||||||||    
T  44353306 accacctaaaaacacccatggagataaaccc-accaaaacacatcaccacctaaaacagactccaaaaaatcaagcactgtaaacacggtatccaccacc 44353404  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaa-taaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaa 214  Q
      ||||| |||||||||||| ||||||||||||||||||| |||||||| |||| |||||||||||||| | | |||||| |||||| ||||||||| ||    
T  44353405 gtccatcgtcactactcacctacaaagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaa 44353504  T
Q  215 ggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||| | |||||||||||||||||||||||| |||||||||    
T  44353505 ggatcatgcagctatcacaaacctcgcgacctccgatccaccg 44353547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 38306332 - 38306189
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||    
T  38306332 ccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgccccctgtac 38306233  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  38306232 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 38306189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 88 - 257
Target Start/End: Complemental strand, 37795256 - 37795087
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    |||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  37795256 aagcactgtaaacacggtatccaccaccgcccatcattactacttaaccacaaagaacaccctcaaaataaaactctcaaaccccaacacccaagctgag 37795157  T
Q  188 ccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||| | |||||| ||||||||| |||||||| | |||||||||||||||||||||||| || ||||||    
T  37795156 ccacagttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgaaccaccg 37795087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 220
Target Start/End: Original strand, 31971877 - 31972080
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||||||||||||||||| |||||||||||| |||| |||||| | |||||       |||||||||||||||||||||| ||||||    
T  31971877 accacctaaaaacacccctgaagataaaccc-accaaaacacataaccacctaaaacaaactccaaaaaaacaagcactgtaaacacggtatcaaccacc 31971975  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
     |||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| |||    
T  31971976 gcccatcgtcactactcacccacaaagaacaccctccaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaag 31972075  T
Q  216 gatca 220  Q
    |||||    
T  31972076 gatca 31972080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 87 - 254
Target Start/End: Original strand, 47325698 - 47325865
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||||||||||| ||||||| || | |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  47325698 caagcactgtaaacacagtatccatcatcgcccatcgtcactactcacccacaaagaacaccctcaaaataaaactcccagaccccaacacccaagctga 47325797  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatcca 254  Q
    |||||||| |||||| ||||||||| ||||||||   |||||||||||||||||||||||| ||||||    
T  47325798 gccacatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctccgatcca 47325865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 3419666 - 3419809
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||| ||     
T  3419666 ccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccctcgcccccggtat 3419765  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  3419766 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 3419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 38306599 - 38306369
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||||| ||||||||||  ||||||||||||||||| |||||| | |||||       |||| |||| | ||||| |||||||||||    
T  38306599 accacctaaaaacacccctaaagataaacca-accaaaacacatcaccacctaaaacaaactcccaaaaaacaagaactgcagacacgatatccaccacc 38306501  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
     |||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||| ||| ||||| |||    
T  38306500 acccatcgtcactactcacctacaaagaacaccctcaaaataaaactcacagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaag 38306401  T
Q  216 gatcaagtagctatcacaaacctcgcgacctc 247  Q
    ||||| | ||||||||||||||||||||||||    
T  38306400 gatcatgcagctatcacaaacctcgcgacctc 38306369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 47325895 - 47326038
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||| |||    
T  47325895 ccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccctcgcccccggtac 47325994  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||| ||||||||||||| ||||||    
T  47325995 accagagaaaaaccaaatcaagttaaacaaagattgctgctaga 47326038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 287 - 430
Target Start/End: Complemental strand, 10244251 - 10244109
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||| |||||| |||||    
T  10244251 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccctctcccccggtacac 10244152  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctagatc 430  Q
     |||||||||||||||| | |||||||||||||||| |||||||    
T  10244151 cagagaaaaaccaaatcta-tcaaacaaagattgcaactagatc 10244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 5860101 - 5860271
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||| | |||||||||| |||||   |||||| |||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  5860101 caagcactattaacacggtattcaccattgcccatcgtcactactcatccacaaagaacaccctgaaaataaaactcccagaccccaacacccaagctga 5860200  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||||| |||||| ||||||||  |||||||| | |||||||||||||||||||||||| || ||||||    
T  5860201 gccacatttcgaagagcacctaactgaaggatcatgcagctatcacaaacctcgcgacctccgaaccaccg 5860271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 3867187 - 3867044
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| | |||||| | |||||||||||||||||||| ||||| |||||| || |||    
T  3867187 ccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccacccttcgccctcggtac 3867088  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||| |||||||||||||||||||| |||||||    
T  3867087 accagagaaaaaccatatcaagtcaaacaaagattgtagctaga 3867044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 5860298 - 5860441
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||| || ||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  5860298 ccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccctcgcccccggtac 5860397  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    | ||||||||||||||||  || |||||||||||||||| ||||    
T  5860398 agtagagaaaaaccaaattcagccaaacaaagattgcagataga 5860441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 3419398 - 3419638
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||| ||||||||||||| | ||||||||||| ||||| |||||| ||| |||       ||| || |||||||| | |||||||||||    
T  3419398 accacctaaaaacactcctgaagataaactc-accaaaacacaacaccacctaaaacagaatccaaaaaaacaancattgtaaacatgatatccaccacc 3419496  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
       |||| ||||||||||| ||||||||||||||| |||||||||||| || | ||||||||||||| | ||||||| | |||||  ||||||||| |||    
T  3419497 gttcatcgtcactactcactcacaaagaacacccttaaaataaaactcccaaaccccaacacccaagttaagccacaattcgaagcgcacctaaccgaag 3419596  T
Q  216 gatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||||| ||||||||||||||| | ||||||||||||||||    
T  3419597 gatcaagcagctatcacaaaccttgtgacctctgatccaccg 3419638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 33435178 - 33435038
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  33435178 aacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccggtacac 33435079  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     |||| ||||||||||||||  ||||||||||| || |||||    
T  33435078 cagag-aaaaccaaatcaagctaaacaaagattacaactaga 33435038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 257
Target Start/End: Complemental strand, 3867451 - 3867215
Alignment:
Q  20 acataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcc 118  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||| | |||| | |||||        ||  |||||||||||| |||||||||||  |    
T  3867451 acataaaaacacccctgaagataaactc-accaaaacacatcaccacccaaaacaaactccttcacaaaaacaactgtaaacacgatatccaccaccgtc 3867353  T
Q  119 catcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggat 218  Q
    |||| ||||||||||||| |||||||||||||||||||||||||  || |  |||||||||||||||||||||||  |||||| ||||| ||||||||||    
T  3867352 catcgtcactactcacccccaaagaacaccctcaaaataaaacttccatactccaacacccaagctgagccacatatcgaagagcacctgaccaaaggat 3867253  T
Q  219 caagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    || | || | ||   ||||||||||||||||||||||||    
T  3867252 catgcag-tttccataacctcgcgacctctgatccaccg 3867215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 428
Target Start/End: Complemental strand, 25160867 - 25160743
Alignment:
Q  304 tgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatc 403  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||| |||||||||||||| |    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgccctcggtacaccagagaaaaaccaaacc 25160768  T
Q  404 aagtcaaacaaagattgcagctaga 428  Q
    |||||||||||| || ||| |||||    
T  25160767 aagtcaaacaaaaatagcaactaga 25160743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 88 - 247
Target Start/End: Complemental strand, 10244449 - 10244290
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    |||||| ||||||| ||||||||||| | |||||| |||||||||||||||||||| ||||||| || ||||| || |||| || |||||||||||||||    
T  10244449 aagcaccgtaaacatggtatccaccatcgcccatcgtcactactcacccacaaagaccaccctccaactaaaaatcccagacccaaacacccaagctgag 10244350  T
Q  188 ccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctc 247  Q
    ||||| | | |||| ||||||||| |||||||| | | ||||||||||||||||||||||    
T  10244349 ccacaattcaaagagcacctaaccgaaggatcatgcaactatcacaaacctcgcgacctc 10244290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 37795060 - 37794928
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||| ||| || ||||||||||||||||||||||||||||||| |||    
T  37795060 ccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccctcgcccccggtac 37794961  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
               |||||||||||||||||||||||||||||||||    
T  37794960 -----------accaaatcaagtcaaacaaagattgcagctaga 37794928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 127 - 257
Target Start/End: Complemental strand, 33435337 - 33435208
Alignment:
Q  127 ctactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagc 226  Q
    |||||||||| |||||||||||||||||| |||||||||||| | ||||| ||||||||||||||| | |||||| ||||| ||| |||||||| |||||    
T  33435337 ctactcacccccaaagaacaccctcaaaagaaaactctcagacctcaacaaccaagctgagccacaattcgaagagcacctgaccgaaggatcatgtagc 33435238  T
Q  227 tatcacaaacctcgcgacctctgatccaccg 257  Q
    | |||| |||||||||||||| |||||||||    
T  33435237 tttcac-aacctcgcgacctccgatccaccg 33435208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 296 - 386
Target Start/End: Complemental strand, 6584969 - 6584879
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||| |||||    
T  6584969 caaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcctccggtacac 6584879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 16954722 - 16954582
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    ||||||| ||||||||||||||  |||||||||| ||||||||||||||| |||||||||||| ||||||| || |||||||||||| || | |||||||    
T  16954722 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacctctgatacac 16954623  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| ||||||||  | | ||| |||||||||||||||    
T  16954622 cagagaaagaccaaatcgcg-ccaaccaagattgcagctaga 16954582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 257
Target Start/End: Complemental strand, 25161133 - 25160911
Alignment:
Q  32 ccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccatcatcactac 130  Q
    ||||| |||||||||| ||||||||||||||||| |||||| ||||| |       |||||| ||||||||  |||||||||| | |||||| |||||||    
T  25161133 ccctggagataaaccc-accaaaacacatcaccacctaaaacagacttcaaaaaa-caagcaatgtaaacatagtatccaccaacgcccatcgtcactac 25161036  T
Q  131 tcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagctatc 230  Q
    |||||||||||||||||| | |||  |||||||||||| ||||||| | ||| ||||||||||| | |||| ||||||||  ||||||||   |||||||    
T  25161035 tcacccacaaagaacacctttaaa--aaaactctcagaccccaacatctaagttgagccacatttccaagagcacctaactgaaggatcacacagctatc 25160938  T
Q  231 acaaacctcgcgacctctgatccaccg 257  Q
    |||||||| | ||||||  ||||||||    
T  25160937 acaaaccttgagacctccaatccaccg 25160911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 16828948 - 16829064
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    ||||||| ||||||||||||||  |||||||||| ||||||||||| | | |||||||||||| ||||||| || |||||||||||| |||| |||||||    
T  16828948 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccctgatacac 16829047  T
Q  387 tagagaaaaaccaaatc 403  Q
    |||||||| ||||||||    
T  16829048 tagagaaacaccaaatc 16829064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 40726247 - 40726392
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn-caagcactgtaaacacggtatccaccac 114  Q
    ||||| |||| ||||||||| |||||||||| |||||||||||| |||| |||||| |||||||        ||||||| ||||||||||||||||||||    
T  40726247 accacctaaaaacacccctggagataaaccc-accaaaacacattaccacctaaaacagactccaaaaaaatcaagcacggtaaacacggtatccaccac 40726345  T
Q  115 ctcccatcatcactactcacccacaaagaacaccctcaaaataaaact 162  Q
    | || |||||||||||||| ||||||||||||||||||||||||||||    
T  40726346 cgcctatcatcactactca-ccacaaagaacaccctcaaaataaaact 40726392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 296 - 428
Target Start/End: Complemental strand, 34390022 - 34389891
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||| |||| |||||  ||||| |||| ||     
T  34390022 caaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcacccccagtacaccagag-aac 34389924  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||| |||||||||||  | ||||||| |||||    
T  34389923 accatatcaagtcaaaacatgattgcaactaga 34389891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 427
Target Start/End: Complemental strand, 3478412 - 3478282
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||||  || |||||||||||| ||||||||  |||||||||      
T  3478412 caaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctcacccccgatcaactagagaatt 3478313  T
Q  396 accaaatcaagtcaaacaaagattgcagctag 427  Q
    |||  |||||| ||||| || |||||||||||    
T  3478312 accctatcaagccaaaccaa-attgcagctag 3478282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 399
Target Start/End: Original strand, 42533281 - 42533376
Alignment:
Q  304 tgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaacca 399  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| || |||||||||||| |||||||| ||| ||||||| ||||    
T  42533281 tgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccgatgcaccagagaaacacca 42533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 427
Target Start/End: Original strand, 35745837 - 35745977
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||||||  ||||||  ||||| ||||||||||||||||||||||| | ||| |||||||||| || ||||||| ||||||||||||||||||| |||    
T  35745837 ccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccctcgcccccggtac 35745936  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctag 427  Q
    |  |||| || |||| |||||||||||| |||||||| |||||    
T  35745937 atcagag-aacaccatatcaagtcaaac-aagattgctgctag 35745977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 6716748 - 6716888
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||  |  |||| || |||||||||||| | | || |||||    
T  6716748 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcactctcggtacac 6716847  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| | ||||||||| ||||  |||||||||||||||    
T  6716848 cagagaaacatcaaatcaagccaaa-taagattgcagctaga 6716888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 402
Target Start/End: Complemental strand, 1320863 - 1320748
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||| ||||| | ||||||||||||||||| |||||||||||||  ||||||| |  |||||||||||| |||||||||||     
T  1320863 aacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcacccccgatacat 1320764  T
Q  387 tagagaaaaaccaaat 402  Q
     ||||||| |||||||    
T  1320763 cagagaaacaccaaat 1320748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 3419139 - 3419314
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||| ||||||||||||| | ||||||||||| ||||| |||||| ||| |||       |||||| |||||||| | |||||||||||    
T  3419139 accacctaaaaacactcctgaagataaactc-accaaaacacaacaccacctaaaacagaatccaaaaaaacaagcattgtaaacatgatatccaccacc 3419237  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccaca 192  Q
       |||||||||||||||| |||||| |||||||| |||||||||||| || | ||||||||||||| | |||||||    
T  3419238 gttcatcatcactactcactcacaaaaaacacccttaaaataaaactcccaaaccccaacacccaagttaagccaca 3419314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 8745222 - 8745105
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||| || ||| |||||||| ||| || | |||    
T  8745222 aacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtgcac 8745123  T
Q  387 tagagaaaaaccaaatca 404  Q
     ||||||| |||| ||||    
T  8745122 cagagaaacaccagatca 8745105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 24324810 - 24324927
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||  ||||||| || |||||||||||   ||||| |||||    
T  24324810 aacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccctaaaccccggtacac 24324909  T
Q  387 tagagaaaaaccaaatca 404  Q
     | ||||| |||||||||    
T  24324910 caaagaaacaccaaatca 24324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 44755663 - 44755556
Alignment:
Q  319 aatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatcaagtcaaacaaagat 418  Q
    |||||||||||||||| |||||||||||||| ||||||| || ||||||||||||  || || ||||| ||||||| ||||||||| |||||||||| ||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctc-accacggtacaccagagaaacaccaaatcacgtcaaacaaa-at 44755566  T
Q  419 tgcagctaga 428  Q
     |||||||||    
T  44755565 agcagctaga 44755556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 13311908 - 13311850
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 13311850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 94 - 257
Target Start/End: Original strand, 41089569 - 41089730
Alignment:
Q  94 tgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacat 193  Q
    ||||||||| ||||| |||||| |||||  |||||| | |||| |||||||||||||||||||||||||| |||| || ||||||||   ||||| |||     
T  41089569 tgtaaacacagtatctaccaccgcccattgtcactatt-acccgcaaagaacaccctcaaaataaaactcccagaccctaacacccatcttgagctacac 41089667  T
Q  194 tacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    | |||||| ||||| | | ||| |||| | ||||  ||| |||||||||||||| |||||||||    
T  41089668 ttcgaagagcacctcaacgaagaatcatgcagcttccac-aacctcgcgacctccgatccaccg 41089730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 35745654 - 35745740
Alignment:
Q  106 atccaccacctcccatcatcactactcacccacaaagaacacc-ctcaaaataaaactctcagatcccaacacccaagctgagccac 191  Q
    ||||||| || |||||| ||||||||||||| ||||||||||| |||||||||||||  |||||   ||||||||||||||||||||    
T  35745654 atccacccccacccatcgtcactactcacccccaaagaacacctctcaaaataaaacagtcagacttcaacacccaagctgagccac 35745740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 372
Target Start/End: Complemental strand, 38485610 - 38485540
Alignment:
Q  302 actgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccct 372  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || || || | || |||||||||||    
T  38485610 actgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcacccct 38485540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 47457034 - 47457140
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||||||||||||||| ||||| ||||||||| |||||||||| ||||||| || ||| ||| ||  ||||||||||  |||||||| |||    
T  47457034 aacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagacttcaggacctaatcagacgggcaccccttacccccgatccac 47457133  T
Q  387 tagagaa 393  Q
     ||||||    
T  47457134 cagagaa 47457140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 9349806 - 9349757
Alignment:
Q  299 agaactgactcccgatctcgaatcaaaagtgatcggtccaccagacttta 348  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  9349806 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 9349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 11379139 - 11379223
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccc 371  Q
    |||||||  ||||| |||||||||||||||||||||||||| ||||||  |||||||||  |  |||||||||| ||||||||||    
T  11379139 aacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcacccc 11379223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 6585146 - 6585043
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    ||||| |||||| |||||||| ||| | |||| ||||||||||||  |||| | ||||| |||||||||||||| ||||   ||||||||||||||||||    
T  6585146 cactgaaaacacagtatccacaaccactcatcgtcactactcacctccaaatagcacccctcaaaataaaactcccagacttcaacacccaagctgagcc 6585047  T
Q  190 acat 193  Q
    ||||    
T  6585046 acat 6585043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 12480955 - 12480896
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  12480955 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaactt 12480896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 34390213 - 34390122
Alignment:
Q  104 gtatccaccacctcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactctcagatcccaacacccaagctgagccacatt 194  Q
    |||||| | ||| |||||| |||||||||| || |||||||||||| |||||||||||||| ||||   ||||||||||| |||||||||||    
T  34390213 gtatccgcaaccacccatcgtcactactcatccccaaagaacacccctcaaaataaaactcccagactacaacacccaagttgagccacatt 34390122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 27993568 - 27993606
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagact 27993606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 46133302 - 46133371
Alignment:
Q  299 agaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcac 368  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||||||| || ||||||| || |||||||    
T  46133302 agaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagggcac 46133371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 1820014 - 1820077
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagt 350  Q
    ||||||| |||||||  |||||||| ||||||||||||||  ||||||||||||||||| ||||    
T  1820014 aacttgaatcaaagatttgactccctatctcgaatcaaaatcgatcggtccaccagactctagt 1820077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 44353584 - 44353623
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcgg 334  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  44353584 tcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 345
Target Start/End: Complemental strand, 25153265 - 25153231
Alignment:
Q  311 cgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccaccagact 25153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 46262151 - 46262189
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagact 46262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 9428128 - 9428175
Alignment:
Q  298 aagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||||||| | |||||||||||||||||||||||  |||||||||    
T  9428128 aagaactgacttctgatctcgaatcaaaagtgatcggctcaccagact 9428175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 344
Target Start/End: Original strand, 17802851 - 17802885
Alignment:
Q  310 ccgatctcgaatcaaaagtgatcggtccaccagac 344  Q
    ||||||||||||||||||||||||| |||||||||    
T  17802851 ccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 35206725 - 35206763
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagact 35206763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 23983247 - 23983179
Alignment:
Q  304 tgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctc 373  Q
    |||||||||||||||||||||||  |||||  ||||||||||| |  |||||||||| | ||||||||||    
T  23983247 tgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagaccaaattag-aaggcacccctc 23983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 5e-60; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 20138765 - 20138524
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||| || |||||||||| ||||||||||||||||| |||||| |||||||       |||||||||||||||||||||||||||||    
T  20138765 accacctaaaaacacccatggagataaaccc-accaaaacacatcaccacctaaaacagactccaaaaaatcaagcactgtaaacacggtatccaccacc 20138667  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaa-taaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaa 214  Q
      ||||| |||||||||||| ||||||||||||||||||| |||||||| |||| |||||||||||||| | | |||||| |||||| ||||||||| ||    
T  20138666 gtccatcgtcactactcacctacaaagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtcacatttcgaagagcacctaaccgaa 20138567  T
Q  215 ggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||| | |||||||||||||||||||||||| |||||||||    
T  20138566 ggatcatgcagctatcacaaacctcgcgacctccgatccaccg 20138524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 9519570 - 9519427
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||||||||||||||||||| |||||| |||    
T  9519570 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcacccccggtac 9519471  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  9519470 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 9519427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 24995137 - 24995376
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaaaga-ctccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||||||||||||||||| |||||||||  |||||| ||||||  | ||||       |||||| ||||||||||||||||||||||    
T  24995137 accacctaaaaacacccctgaagataaaccc-accaaaacatgtcaccacctaaaacaatctccaaaaaaacaagcattgtaaacacggtatccaccacc 24995235  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcaga-tcccaacacccaagctgagccacattacgaagaacacctaaccaaa 214  Q
     |||||| ||||||||||| ||||||||||||||||||||||||||||  |||  ||||||||||||||||||||| ||| |||||| ||||||||| ||    
T  24995236 gcccatcgtcactactcacgcacaaagaacaccctcaaaataaaactcctagacccccaacacccaagctgagccatatttcgaagagcacctaaccgaa 24995335  T
Q  215 ggatcaagtagctatcacaaacctcgcgacctctgatccac 255  Q
    |||||| | ||||||||||||||||||||||||||| ||||    
T  24995336 ggatcatgcagctatcacaaacctcgcgacctctgacccac 24995376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 24995405 - 24995548
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||||||||  |||    
T  24995405 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctcgcccccagtac 24995504  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  24995505 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 24995548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 32066305 - 32066448
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||| || ||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| |||    
T  32066305 ccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcgcccccggtac 32066404  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  32066405 actagagaaaaaccaaatcaagtcaaacaaagattgcaactaga 32066448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 34389015 - 34389158
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| | |||    
T  34389015 ccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccctggtac 34389114  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||| ||||||||||||    
T  34389115 accagagaaaaaccaaatcaagtcaaacaaaaattgcagctaga 34389158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 88 - 257
Target Start/End: Original strand, 31207176 - 31207345
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    ||||||||||||||| |||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||    
T  31207176 aagcactgtaaacacagtatccaccatcgcccatcgtcactactcacccacaaagaacaccctcaaaataaaactcccatactccaacacccaagctgag 31207275  T
Q  188 ccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||||| |||||| ||||||||| |||| |||   |||||||||||||||||||||||| |||||||||    
T  31207276 ccacatttcgaagagcacctaaccgaagggtcattcagctatcacaaacctcgcgacctccgatccaccg 31207345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 295 - 428
Target Start/End: Complemental strand, 36630898 - 36630765
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaa 394  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| | |||||    
T  36630898 tcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccctcgcccccggtacaccaaagaaa 36630799  T
Q  395 aaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||||||||||||||||||||||||||||||    
T  36630798 aaccaaatcaagtcaaacaaagattgcagctaga 36630765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 9519764 - 9519597
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcaga-tcccaacacccaagctgagcc 189  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  9519764 cactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaagaacaccctcaaaataaaactctcagacccccaacacccaagctgagcc 9519665  T
Q  190 acattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    | ||| |||||| ||||||||| || ||||| | ||||||||||||| |||| ||||| || ||||||    
T  9519664 atatttcgaagagcacctaaccgaatgatcatgcagctatcacaaacttcgcaacctccgacccaccg 9519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 12898018 - 12898247
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||| |||||| | |||||       ||| |  || ||||| || |||||| |||    
T  12898018 accacctaaaaacacccctgaagataaaccc-accaaaacacatcaccacctaaaacaaactccaaaaaaacaatccatgcaaacatggaatccacaacc 12898116  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
       |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||| |||    
T  12898117 gttcatcgtcactactcacccacaaagaacaccctcaaaataaaactctaagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaag 12898216  T
Q  216 gatcaagtagctatcacaaacctcgcgacctc 247  Q
    |||| || ||||||||||||||||||||||||    
T  12898217 gatc-agcagctatcacaaacctcgcgacctc 12898247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 37986671 - 37986841
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||| ||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||| ||||||||||| |||| |  ||||||||||||||    
T  37986671 caagcattgtaaacacggtatctaccaccacccatcgtcattactcacccacaaagaacaccctccaaataaaactcccagaccgaaacacccaagctga 37986770  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||||| |||||| ||||||||| |||||||| | |||||||||||||||||||||||| || ||||||    
T  37986771 gccacatttcgaagagcacctaaccgaaggatcaggcagctatcacaaacctcgcgacctccgaaccaccg 37986841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 88 - 257
Target Start/End: Original strand, 34388821 - 34388988
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    ||||| |||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34388821 aagcaatgtaaacacg-tatccaccaccgcctatcgtcactactcacccacaaagaacaccctcaaaataaaactctcataccccaacacccaagctgag 34388919  T
Q  188 ccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||| | ||||||||||||||  ||||||| | ||||||||||||||||| ||||||  |||||||||    
T  34388920 ccacatgatgaagaacacctaactgaaggatc-actagctatcacaaacctcacgacctacgatccaccg 34388988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 37986868 - 37987011
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| || |||||||||| ||  |||||||||||||||||||||||||||||| |||    
T  37986868 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctcgcccccggtac 37986967  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||| ||||| |||| |||||    
T  37986968 accagagaaaaaccaaatcaagtcaaataaagaatgcaactaga 37987011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 285 - 408
Target Start/End: Original strand, 31207372 - 31207494
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| | |||    
T  31207372 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggca-ccctcgcccctggtac 31207470  T
Q  385 actagagaaaaaccaaatcaagtc 408  Q
    || |||||||||||||||||||||    
T  31207471 accagagaaaaaccaaatcaagtc 31207494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 32066119 - 32066278
Alignment:
Q  98 aacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacg 197  Q
    ||||| |||||||||||| |||||| ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| |     
T  32066119 aacactgtatccaccaccgcccatcgtcactactcactcacaaagaacaccctccaaataaaactctcagaccccaacacccaagctgaaccacatttca 32066218  T
Q  198 aagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||| || |||||| || ||||| | |||||||||||||||||| |||||||| ||||||    
T  32066219 aagagcatctaaccgaatgatcatgcagctatcacaaacctcgcaacctctgaaccaccg 32066278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 248
Target Start/End: Original strand, 41893215 - 41893375
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||| ||||| |||| | |||||||||||||||    
T  41893215 caagaactgtaaacacggtatccaccaccgaccatcgtcactactcacccacaaagaacaccctgaaaatagaactcccagacctcaacacccaagctga 41893314  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctct 248  Q
    |||||||| ||||||  |||| |   |||||||| | ||||||||||||||| |||||||||    
T  41893315 gccacatttcgaagagtacct-atagaaggatcatgcagctatcacaaaccttgcgacctct 41893375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 10248565 - 10248705
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||| | ||||| || ||||||| ||| |||||||| |||||| |||||    
T  10248565 aacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacac 10248664  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| ||||||||||| |||||||| ||||||||||||    
T  10248665 cagagaaacaccaaatcaagccaaacaaa-attgcagctaga 10248705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 15821399 - 15821497
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaa 393  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||| || ||||| ||||||    
T  15821399 tcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgccctcggtacaccagagaa 15821497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 377
Target Start/End: Original strand, 16457471 - 16457562
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgccc 377  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||| ||||||||||||    
T  16457471 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcgccc 16457562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 16457288 - 16457444
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||| |||||| |||||||||||              ||||||||||    
T  16457288 caagcactgtaaacacggtatccaccaccgtccatcgtcactactcacccataaagaccaccctgaaaataaaact--------------cccaagctga 16457373  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||||| | |||| |||||||||| | ||||| | |||||||||||||||| |||| || || ||||||    
T  16457374 gccacatttcaaagagcacctaaccacaagatcatgcagctatcacaaacctcacgacatccgaaccaccg 16457444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 36631156 - 36631038
Alignment:
Q  23 taaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccat 121  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |||||| |||||||       ||| ||||||||||||||||||||||||| |||||    
T  36631156 taaaaacacccctgaagataaaccc-accaaaacacatcaccacctaaaacagactccaaaaaaacaaacactgtaaacacggtatccaccaccgcccat 36631058  T
Q  122 catcactactcacccacaaa 141  Q
    | | ||||||||||| ||||    
T  36631057 cgtaactactcacccccaaa 36631038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 22773699 - 22773598
Alignment:
Q  155 ataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatcca 254  Q
    ||||||||| |||| |||||||||||| |||||||||||| |||||| ||||||||  |||||||| |||| |||||||||||||| ||||||  |||||    
T  22773699 ataaaactcccagaccccaacacccaaactgagccacatttcgaagagcacctaacagaaggatcatgtagatatcacaaacctcgtgacctccaatcca 22773600  T
Q  255 cc 256  Q
    ||    
T  22773599 cc 22773598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 35821508 - 35821429
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctca 166  Q
    |||||||||||||||| ||||| | |||| ||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  35821508 caagcactgtaaacacagtatctagcaccgcccatcatcactactcatcctcaaagaacacccttaaaataaaactctca 35821429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 379
Target Start/End: Original strand, 12898300 - 12898378
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgccccc 379  Q
    |||||||||| |||||||||||||||||||||||  ||||||||| || ||||||||||  ||||||||||||||||||    
T  12898300 aactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacccctcgccccc 12898378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 17657014 - 17657100
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctc 373  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||  |||||| |||||||  |||| |||| ||||||||||||    
T  17657014 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccctc 17657100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 30236140 - 30236247
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||  ||||||||||| |  ||||||| || |||||||||||  |||||| | |||    
T  30236140 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccccttacccccggtccac 30236239  T
Q  387 tagagaaa 394  Q
     |||||||    
T  30236240 cagagaaa 30236247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 15906755 - 15906686
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaa 356  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||    
T  15906755 aacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagacttcaggaccaaa 15906686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 22773883 - 22773815
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaa 155  Q
    |||||| |||||||| |||| |||||||  |||||| ||||||||||||||||||||||||||||||||    
T  22773883 caagcattgtaaacatggtaaccaccactgcccatcgtcactactcacccacaaagaacaccctcaaaa 22773815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 10552325 - 10552247
Alignment:
Q  299 agaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccc 378  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||| || ||||||| || ||||||||||| |||||    
T  10552325 agaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcag-agggcaccccttgcccc 10552247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 35816066 - 35816121
Alignment:
Q  94 tgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccc 149  Q
    ||||||||| |||||||| ||| |||||||||||||||||||| ||||||||||||    
T  35816066 tgtaaacacagtatccacaaccacccatcatcactactcacccccaaagaacaccc 35816121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 41893411 - 41893470
Alignment:
Q  286 caacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||||  |||||||||||||||||||||||||||||||||| | || ||||||||||    
T  41893411 caacttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagact 41893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 32945715 - 32945760
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatc 332  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  32945715 aacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatc 32945760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 20138487 - 20138448
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcgg 334  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  20138487 tcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 32066026 - 32066080
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  32066026 accacctaaaaacacccctgaagataaa-cccaccaaaacacatcaccacctaaaa 32066080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 35062514 - 35062456
Alignment:
Q  299 agaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaat 357  Q
    ||||||||||| ||||||||||||||||  |||||| ||||||||||| || |||||||    
T  35062514 agaactgactctcgatctcgaatcaaaatcgatcggcccaccagacttcagaaccaaat 35062456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 12198081 - 12198154
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattag 360  Q
    |||||||  |||||||||||||||| || |  ||| |||||||||||||||||||||||| |  ||||||||||    
T  12198081 aacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattag 12198154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 12442509 - 12442582
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattag 360  Q
    |||||||  |||||||||||||||| || |  ||| |||||||||||||||||||||||| |  ||||||||||    
T  12442509 aacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattag 12442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 23264761 - 23264716
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||    
T  23264761 aactgactcccgatctcgaatcaaaattgataggtccatcagactt 23264716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 3679515 - 3679471
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgat 331  Q
    ||||||| |||||| || |||||||||||||||||||||||||||    
T  3679515 aacttgaatcaaagcaccgactcccgatctcgaatcaaaagtgat 3679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 17720727 - 17720786
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaa 356  Q
    |||||||||||||||||||| ||||||||||| |||| | |||||| ||||||| ||||||    
T  17720727 caaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaa 17720786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 9519853 - 9519791
Alignment:
Q  9 acatcatcaccacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    ||||||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||| ||||||    
T  9519853 acatcataaccacctaaaaacacccctgatgataaaccc-accaaaacacgtcaccacctaaaa 9519791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 15821230 - 15821359
Alignment:
Q  125 cactactcacccacaaagaacac-cctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagt 223  Q
    |||||||||| |  ||||||||| |||||||||||||||| ||||   ||||| || |||||||||||||| |||| | | |||||||||| || |||||    
T  15821230 cactactcactccaaaagaacactcctcaaaataaaactcccagacttcaacatccgagctgagccacatt-cgaaaagctcctaaccaaatgaacaagt 15821328  T
Q  224 agctatcacaaacctcgcgacctctgatccac 255  Q
     | |  ||| |||||| |||||||||||||||    
T  15821329 tgtttccac-aacctctcgacctctgatccac 15821359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 27889185 - 27889131
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    ||||| |||| ||||||||| |||||||||| ||||||||||||||||| ||||||    
T  27889185 accacctaaaaacacccctggagataaaccc-accaaaacacatcaccacctaaaa 27889131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 27947843 - 27947789
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa 72  Q
    ||||| |||| ||||||||| |||||||||| ||||||||||||||||| ||||||    
T  27947843 accacctaaaaacacccctggagataaaccc-accaaaacacatcaccacctaaaa 27947789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 346
Target Start/End: Complemental strand, 40531281 - 40531242
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagactt 40531242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 345
Target Start/End: Complemental strand, 33967375 - 33967337
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  33967375 ctcctgatctcgaatcaaaagtgatcggcccaccagact 33967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 36631036 - 36630939
Alignment:
Q  156 taaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatcca 254  Q
    |||||| | |||| ||| ||| ||||| ||||||||||| |||||| ||||| ||| |||||||| | ||||  ||| |||||||||||||| ||||||    
T  36631036 taaaacacgcagacccccacatccaagttgagccacatttcgaagagcacctgaccgaaggatcatgcagctcccac-aacctcgcgacctccgatcca 36630939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 38577606 - 38577679
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacac-cctcaaaataaaactc 163  Q
    |||||||||||| |||||||| | |  ||||| |||||||||| || |||||||||| || |||||||||||||    
T  38577606 cactgtaaacacagtatccacaatcatccatcgtcactactcatccccaaagaacactccacaaaataaaactc 38577679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 24449672 - 24449912
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn-caagcactgtaaacacggtatccaccac 114  Q
    |||||||||| ||||||||  |||||||| | ||||||||||||||||| |||||  |||||||        ||||||||||||||||||||||||||||    
T  24449672 accacataaaaacacccctagagataaacac-accaaaacacatcaccacctaaagtagactccaaaaaaaacaagcactgtaaacacggtatccaccac 24449770  T
Q  115 ctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaa 214  Q
    | |||||| |||||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||| |||| |||||| ||||||||| ||    
T  24449771 cgcccatcgtcactactcacccacaaataacaccctcaaaataaaactcctagaccccaacacccaagctgagccgcatttcgaagagcacctaaccgaa 24449870  T
Q  215 ggatcaagtagctatcacaaacctcgcgacctctgatccacc 256  Q
    |||||| | | |||||||||||||||||||||| ||||||||    
T  24449871 ggatcatgcaactatcacaaacctcgcgacctccgatccacc 24449912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 41920523 - 41920381
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| | |||    
T  41920523 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccctcgccccag-tac 41920425  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  41920424 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 41920381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 31585770 - 31585913
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |  |||    
T  31585770 ccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcaccctcagtac 31585869  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  31585870 accagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 31585913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 46692573 - 46692802
Alignment:
Q  28 acacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccatcatca 126  Q
    ||||||||||||||||||||  |||||||||||||||| |||||| | |||||       ||||||||||||||||| |||| |||||| |||||| |||    
T  46692573 acacccctgaagataaaccct-ccaaaacacatcaccacctaaaacaaactccaaaaaaacaagcactgtaaacacgatatcaaccaccgcccatcgtca 46692671  T
Q  127 ctactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagc 226  Q
    ||||||||||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||||||| |||||| ||| |||||  ||||| | | |||    
T  46692672 ctactcacccacaaagaacaccctccaaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacttaaccggaggataatgcagc 46692771  T
Q  227 tatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||||||||||||||||||| || ||||||    
T  46692772 tatcacaaacctcgcgacctccgaaccaccg 46692802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 5389433 - 5389574
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||| |||||||||||||||||| |||||    
T  5389433 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccggtacac 5389532  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||||| |||||||||||||||||||||||||||||||    
T  5389533 cagagaaaaatcaaatcaagtcaaacaaagattgcagctaga 5389574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 30685914 - 30686057
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | |||    
T  30685914 ccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccctcgccccaggtac 30686013  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || ||||||||||||||||||||||||||| |||||||| ||||    
T  30686014 accagagaaaaaccaaatcaagtcaaacaaggattgcagttaga 30686057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 5459499 - 5459269
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| | |||||||||||||||| | ||||||||||||||| |  ||||| | |||||       ||| |||||||||||||||||||||||||    
T  5459499 accacctaaaaatacccctgaagataaactc-accaaaacacatcactacttaaaacaaactccaaaaaaacaatcactgtaaacacggtatccaccacc 5459401  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
     |||||| ||||||||||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||||| | |||| ||||||||  |||    
T  5459400 gcccatcgtcactactcacccacaaagaacaccatcaaaataaaacttccagaccccaacacccaagctgagccacatttcaaagagcacctaactgaag 5459301  T
Q  216 gatcaagtagctatcacaaacctcgcgacctc 247  Q
    ||||| | |||||||||||||||||| |||||    
T  5459300 gatcatgcagctatcacaaacctcgcaacctc 5459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 5389165 - 5389404
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| ||||||||  |||||||||  ||||||||||||||||| |||||| | |||||       ||||||| |||||||||||||||||||||    
T  5389165 accacctaaaaacacccctagagataaacca-accaaaacacatcaccacctaaaacaaactcccaaaaaacaagcaccgtaaacacggtatccaccacc 5389263  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
     |||||| |||||||||||  |||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||| ||| ||||| |||    
T  5389264 gcccatcgtcactactcacttacaa-gaacaccctcaaaataaaactcccagaccccaacacccaagctgagccacatatcgaagagcacttaaccgaag 5389362  T
Q  216 gatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    || || ||||||| |||||||||||||||||| || ||||||    
T  5389363 gaccatgtagctaacacaaacctcgcgacctccgaaccaccg 5389404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 24449951 - 24450083
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||||||| |||||||| |||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  24449951 caaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgcccccggtacaccagagaaaa 24450050  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||||| ||||||||||||||||||||||||||    
T  24450051 accaaaccaagtcaaacaaagattgcagctaga 24450083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 46692829 - 46692972
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||| |||||||||| |||    
T  46692829 ccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctctcgcccccggtac 46692928  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || ||||||||| ||||||||||||||||||||||||| |||||    
T  46692929 accagagaaaaatcaaatcaagtcaaacaaagattgcaactaga 46692972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 31585609 - 31585743
Alignment:
Q  124 tcactactcacccacaaagaacaccctcaaaataaaactctcagatccc-aacacccaagctgagccacattacgaagaacacctaaccaaaggatcaag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| ||||||||||||||||||      
T  31585609 tcactactcacccacaaagaacaccctcaaaataaaactctcagacccccaacacccaagcttagccacatttcgaagagcacctaaccaaaggatcata 31585708  T
Q  223 tagctatcacaaacctcgcgacctctgatccaccg 257  Q
     |||||||||||||||||||||||| || ||||||    
T  31585709 cagctatcacaaacctcgcgacctccgacccaccg 31585743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 24684488 - 24684630
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||| || |||||||||||||  |||||||||||| |||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||| |||    
T  24684488 ccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccctcgcccccggtac 24684587  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||| ||||||||||||||||||||||||||| ||||||||    
T  24684588 accagag-aaaaccaaatcaagtcaaacaaagattacagctaga 24684630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 41920725 - 41920550
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||| |||||||||||||| ||||||| || ||| |||||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||    
T  41920725 caagcaatgtaaacacggtattcaccaccgcctatcgtcactactcacccacaaaaaacaccctcaaaataaaactccaagaccccaacacccaagctga 41920626  T
Q  187 gccacattacgaagaacacctaaccaa-----aggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||||||| | ||||| ||||||||  |     ||||||| | |||||||||||||||||||||||| |||||||||    
T  41920625 gccacatgatgaagagcacctaactgaaggttaggatcatgcagctatcacaaacctcgcgacctccgatccaccg 41920550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 9313310 - 9313441
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||||||||||||||||||||||||||||||| | |||| ||||||||| ||||||| || |||||||||||| | |||||||||| |||||||     
T  9313310 caaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgatacacgagagaaac 9313409  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||||| | |||||||| ||||||||||||    
T  9313410 accaaatcacggcaaacaaa-attgcagctaga 9313441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 296 - 428
Target Start/End: Complemental strand, 24658989 - 24658859
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    |||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||| ||     
T  24658989 caaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcaccccttgcccccgatacaccagag-aac 24658891  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||| |||||||||||| | |||||||||||||    
T  24658890 accatatcaagtcaaac-atgattgcagctaga 24658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 285 - 413
Target Start/End: Original strand, 46814477 - 46814604
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||||||  |||| | |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||| |||    
T  46814477 ccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgcccccggtac 46814576  T
Q  385 actagagaaaaaccaaatcaagtcaaaca 413  Q
    || |||| || |||| |||||||||||||    
T  46814577 accagag-aacaccatatcaagtcaaaca 46814604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 428
Target Start/End: Original strand, 20113543 - 20113674
Alignment:
Q  297 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaa 396  Q
    |||||||||| ||||||||| ||||||||| ||||||  ||| |||||| || ||||||||||||||||||||||||||||||| |||||  ||||||||    
T  20113543 aaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgcccccggtacacccgagaaaaa 20113642  T
Q  397 ccaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||| ||  || |||||||||||||||||||    
T  20113643 ccaaaccatatctaacaaagattgcagctaga 20113674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 413
Target Start/End: Complemental strand, 7857705 - 7857597
Alignment:
Q  304 tgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatc 403  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||  ||||| |||||| || || |||    
T  7857705 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcccccagtacaccagagaacaa-catatc 7857607  T
Q  404 aagtcaaaca 413  Q
    ||||||||||    
T  7857606 aagtcaaaca 7857597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 30685666 - 30685887
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnn-caagcactgtaaacacggtatccaccac 114  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||| |||||| |||||||        |||||| |||||||||||||||||||||    
T  30685666 accacctaaaaacacccctgaagataaaccc-accaaaacacatcaccacctaaaacagactccaacaaaaacaagcaatgtaaacacggtatccaccac 30685764  T
Q  115 ctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaa 214  Q
    | |||||| ||||||| ||||||||||||||||                    ||||||||||||||||||||||||||  | | || ||||||||||||    
T  30685765 cgcccatcttcactacacacccacaaagaacac--------------------atcccaacacccaagctgagccacatatcaaggagcacctaaccaaa 30685844  T
Q  215 ggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    |||||| | |||||||||||||||||||||||| || ||||||    
T  30685845 ggatcatgcagctatcacaaacctcgcgacctccgaaccaccg 30685887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 380
Target Start/End: Complemental strand, 5459231 - 5459137
Alignment:
Q  286 caacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccg 380  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||    
T  5459231 caacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacccctcgcccccg 5459137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 6764225 - 6764346
Alignment:
Q  118 ccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaagga 217  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||| |||| ||||  | ||||| ||||||||||| |||||| ||||||||| |||||    
T  6764225 ccatcgtcactactcacccacaaagaacatcctgaaaataaaactcccagaccccagtatccaagttgagccacatttcgaagagcacctaaccgaagga 6764324  T
Q  218 tcaagtagctatcacaaacctc 239  Q
     || | ||||||||||||||||    
T  6764325 ccatgcagctatcacaaacctc 6764346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 27031850 - 27031958
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    |||||||||  |||||| ||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||  |||||| |||    
T  27031850 ccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccggtac 27031949  T
Q  385 actagagaa 393  Q
    || ||||||    
T  27031950 accagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 301 - 414
Target Start/End: Complemental strand, 34774925 - 34774814
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaa 400  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| || |||||||| ||| |||||| || |||||||||| | |||    
T  34774925 aactgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcacccccg-tatactagagaaacatcaa 34774828  T
Q  401 atcaagtcaaacaa 414  Q
    |||||| |||||||    
T  34774827 atcaagccaaacaa 34774814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 6583232 - 6583314
Alignment:
Q  291 tgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctc 373  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||    
T  6583232 tgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccctc 6583314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 17033655 - 17033571
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccc 371  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||| || ||||||||||    
T  17033655 aacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcacccc 17033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 27102260 - 27102142
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggca-cccctcgcccccgataca 385  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||   |||||||   ||||||  || |||||| |||||| ||| || ||||    
T  27102260 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccgttagactttgagaccaaaacagaagggcaccccctcaccctcggtaca 27102161  T
Q  386 ctagagaaaaaccaaatca 404  Q
    | ||||||| |||||||||    
T  27102160 ccagagaaacaccaaatca 27102142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 6804808 - 6804739
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaat 156  Q
    ||||||||||||| || |||||||||||| |||||| ||||| ||||||||||||||||||||| |||||    
T  6804808 caagcactgtaaatacagtatccaccaccgcccatcgtcactcctcacccacaaagaacaccctgaaaat 6804739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 16147624 - 16147484
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||  ||||||||||||||||||| | ||||||||| | ||||  |||||| |||| |  ||||||  || |||| ||| ||| |||||| ||| |    
T  16147624 aacttgacccaaagaactgactcccgatattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaagggaacctctcacccccggtacgc 16147525  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    |||||||| ||||||||||| ||||| |||||||||||||||    
T  16147524 tagagaaacaccaaatcaagccaaac-aagattgcagctaga 16147484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 19598705 - 19598646
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  19598705 aacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactt 19598646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 24684240 - 24684350
Alignment:
Q  23 taaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacctcccat 121  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |||||| | |||||       ||| | ||||||||||| ||||||||||| |||||    
T  24684240 taaaaacacccctgaagataaaccc-accaaaacacatcaccacctaaaacaaactccaaaaaaacaaactctgtaaacacgatatccaccaccgcccat 24684338  T
Q  122 catcactactca 133  Q
    | ||||||||||    
T  24684339 cgtcactactca 24684350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 32864573 - 32864659
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctc 373  Q
    ||||||| ||||||||| |||| |||||||||||| ||||||||| || ||||||| |||||| |||||||  | ||||||||||||    
T  32864573 aacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctc 32864659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 38544759 - 38544809
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  38544759 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactt 38544809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 7857915 - 7857813
Alignment:
Q  91 cactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactctcagatcccaacacccaagctgagcc 189  Q
    |||||||||||||||  |||| ||| ||||||  |||||||||||| || ||||||||| |||||||||||||| ||||   |||||||||| |||||||    
T  7857915 cactgtaaacacggt--ccacaaccacccatcgccactactcacccccatagaacacccctcaaaataaaactcccagacttcaacacccaaactgagcc 7857818  T
Q  190 acatt 194  Q
    |||||    
T  7857817 acatt 7857813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 27905473 - 27905420
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagacttta 348  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  27905473 tcaaagaactaacttctgatctcgaatcaaaagtgatcggtccaccagacttta 27905420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 4651834 - 4651742
Alignment:
Q  302 actgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaa 394  Q
    ||||||||||||||||||||||||||||||||| || ||||||||  | || || | || |||||||||||  |||||| ||||| |||||||    
T  4651834 actgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaagggcaccccttacccccggtacaccagagaaa 4651742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 15840924 - 15840982
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||| ||||  |||||||||||||||||||||||||||||||| | ||||||||||    
T  15840924 aacttgaatcaagaaactgactcccgatctcgaatcaaaagtgatcagcccaccagact 15840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 31584781 - 31584894
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaaagactccnnnnnnncaagcactgtaaacacggtatccaccacct 116  Q
    ||||| |||| |||||||||||||||||||| |||||||||  |||||| ||||||   ||||       ||| |||||||||||||||||||||||||     
T  31584781 accacctaaaaacacccctgaagataaaccc-accaaaacatgtcaccacctaaaacacctccaaaaaaacaatcactgtaaacacggtatccaccaccg 31584879  T
Q  117 cccatcatcactact 131  Q
    | |||| ||||||||    
T  31584880 ctcatcgtcactact 31584894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 42374217 - 42374175
Alignment:
Q  302 actgactcccgatctcgaatcaaaagtgatcggtccaccagac 344  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  42374217 actgactcccgatctcaaatcaaaagcgatcggtccaccagac 42374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 24659189 - 24659089
Alignment:
Q  94 tgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaaca-ccctcaaaataaaactctcagatcccaacacccaagctgagccaca 192  Q
    ||||||||| ||| |||  ||| |||||| ||||||||||||| |||| |||| ||||||||||||||||| |||| |  ||| |||| |||||||||||    
T  24659189 tgtaaacacagtaaccataaccacccatcgtcactactcacccccaaataacacccctcaaaataaaactcccaga-cttaactcccaggctgagccaca 24659091  T
Q  193 tt 194  Q
    ||    
T  24659090 tt 24659089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 42374090 - 42374049
Alignment:
Q  302 actgactcccgatctcgaatcaaaagtgatcggtccaccaga 343  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  42374090 actgactcccgatctcgaatcaaaagtaaccggtccaccaga 42374049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 30655615 - 30655571
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||    
T  30655615 aactgactcccgatctcgaatcaaaagcgatcggcccactagact 30655571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 32882632 - 32882585
Alignment:
Q  89 agcactgtaaacacggtatccaccacctcccatcatcactactcaccc 136  Q
    ||||||||||||||| |||||| |||| |||||| |||||||||||||    
T  32882632 agcactgtaaacacgatatccaacaccacccatcgtcactactcaccc 32882585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 9081527 - 9081569
Alignment:
Q  297 aaagaactgactcccgatctcgaatcaaaagtgatcggtccac 339  Q
    |||| |||| ||||||||||||||||||||||||||| |||||    
T  9081527 aaagcactggctcccgatctcgaatcaaaagtgatcgatccac 9081569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 345
Target Start/End: Complemental strand, 17891560 - 17891522
Alignment:
Q  307 ctcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  17891560 ctcccaatctcgaatcaaaagtgatcggtccatcagact 17891522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 22200069 - 22200019
Alignment:
Q  295 tcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||| | |||||| |||||| ||||||||||||||||||||| ||||||    
T  22200069 tcaaagcattgactctcgatcttgaatcaaaagtgatcggtccatcagact 22200019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 24684355 - 24684460
Alignment:
Q  151 caaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctga 250  Q
    |||| |||||| | |||| ||| ||| ||||| ||||||||||| |||||| ||||| ||| |||||||| | | ||  ||| |||||||||||||| ||    
T  24684355 caaactaaaacacgcagaccccgacatccaagttgagccacatttcgaagagcacctgaccgaaggatcatgcatcttccac-aacctcgcgacctccga 24684453  T
Q  251 tccaccg 257  Q
    |||||||    
T  24684454 tccaccg 24684460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 27031660 - 27031761
Alignment:
Q  93 ctgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactctcagatcccaacacccaagctgagccac 191  Q
    |||||||||| |||||||  ||  || ||| ||||||||||||| || ||||||||| |||||||||||||| ||||   ||||| |||| |||||||||    
T  27031660 ctgtaaacacagtatccataacggcctatcgtcactactcaccc-cagagaacacccctcaaaataaaactcccagacttcaacatccaaactgagccac 27031758  T
Q  192 att 194  Q
    |||    
T  27031759 att 27031761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 46814286 - 46814388
Alignment:
Q  93 ctgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaaca-ccctcaaaataaaactctcagatcccaacacccaagctgagccac 191  Q
    |||||||||| |||||||| |||  ||||| ||||||||||||  |||| |||| ||||| ||||||||||| || |   ||||||||| || |||||||    
T  46814286 ctgtaaacacagtatccacaaccgtccatcgtcactactcacctccaaataacacccctcgaaataaaactcccatacttcaacacccacgccgagccac 46814385  T
Q  192 att 194  Q
    |||    
T  46814386 att 46814388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 341
Target Start/End: Original strand, 18787241 - 18787270
Alignment:
Q  312 gatctcgaatcaaaagtgatcggtccacca 341  Q
    ||||||||||||||||||||||||||||||    
T  18787241 gatctcgaatcaaaagtgatcggtccacca 18787270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 46603452 - 46603403
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  46603452 caaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagact 46603403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 16510311 - 16510454
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| | ||||||||||||| | |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| |||| || |||    
T  16510311 ccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccctcggtac 16510410  T
Q  385 actagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
    || |||||||||||| ||||||||||||||||||||||||||||    
T  16510411 accagagaaaaaccatatcaagtcaaacaaagattgcagctaga 16510454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 10542170 - 10541965
Alignment:
Q  17 accacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggtatccaccacc 115  Q
    ||||| |||| |||||||||||||||||||| | ||||  ||| ||||| |||||| | |||||       |||||||| |||| |||||||||||||||    
T  10542170 accacctaaaaacacccctgaagataaaccc-atcaaattacaccaccacctaaaacaaactccaaaaaaacaagcactttaaatacggtatccaccacc 10542072  T
Q  116 tcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgagccacattacgaagaacacctaaccaaag 215  Q
     |||||| ||||||||||||||||||||| |||||| ||||||||||  |||| ||||||||||||||||||||||||| |||||| ||||||||| |||    
T  10542071 gcccatcgtcactactcacccacaaagaataccctccaaataaaacttccagaccccaacacccaagctgagccacatttcgaagagcacctaaccgaag 10541972  T
Q  216 gatcaag 222  Q
    |||||||    
T  10541971 gatcaag 10541965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 3117564 - 3117420
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||  | ||||||||||||||||||||||||||||  ||    
T  3117564 ccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccctcgcccccggaac 3117465  T
Q  385 actagagaaaaaccaaatcaagtc-aaacaaagattgcagctaga 428  Q
    || ||||||||||||||||||||| |||||||||||||| |||||    
T  3117464 accagagaaaaaccaaatcaagtcaaaacaaagattgcaactaga 3117420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 3117761 - 3117601
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||||||||||||||| |||||||| | |||| || ||||| ||||||||||||||||||  ||||||||||| |||| ||||||||||||| |||    
T  3117761 caagcactgtaaacacggtaaccaccaccgctcatcgtctctacttacccacaaagaacaccctataaataaaactcccagaccccaacacccaagttga 3117662  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctc 247  Q
    |||||||| |||||| ||| ||| | |||||||| | | ||||||||||||||||||||||    
T  3117661 gccacatttcgaagagcacataatcgaaggatcatgcaactatcacaaacctcgcgacctc 3117601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 214
Target Start/End: Complemental strand, 14663344 - 14663218
Alignment:
Q  88 aagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctgag 187  Q
    |||||||||||||||  ||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||| || | ||||||| |||||| |||    
T  14663344 aagcactgtaaacacaatatccaccaccgcccatcgtcactactcacccgcaaagaacatcctcaaaataaaactcccaaaccccaacatccaagccgag 14663245  T
Q  188 ccacattacgaagaacacctaaccaaa 214  Q
    ||||||| ||||||||| |||||||||    
T  14663244 ccacatttcgaagaacatctaaccaaa 14663218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 20701824 - 20701955
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||| ||  |  ||||||| || |||||||||||| |||||| ||||| ||||||||    
T  20701824 caaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccggtacaccagagaaaa 20701923  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||||| | ||||||||  |||||||||||    
T  20701924 accaaatcacgccaaacaaa-tttgcagctaga 20701955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 32935351 - 32935491
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||||| || ||||||| || |||| ||||||| |||||||| ||     
T  32935351 aacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcacccccgatccat 32935450  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     | ||||| |||| | |||| ||||  |||||||||||||||    
T  32935451 catagaaacaccataacaagccaaa-gaagattgcagctaga 32935491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 9224101 - 9224027
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcaccc 370  Q
    |||||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||| |||  |||||||||    
T  9224101 caaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaacttaaaagggcaccc 9224027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 428
Target Start/End: Original strand, 3880623 - 3880735
Alignment:
Q  315 ctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatcaagtcaaacaa 414  Q
    |||||||||||||||||||| |||||| ||||||| ||||||| || |||||||| ||| ||| || || || ||||||| ||||||||| | ||||| |    
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaatcatgccaaac-a 3880721  T
Q  415 agattgcagctaga 428  Q
    |||| |||||||||    
T  3880722 agatagcagctaga 3880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 26216042 - 26216090
Alignment:
Q  298 aagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26216042 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 26216090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 357
Target Start/End: Original strand, 26534742 - 26534801
Alignment:
Q  298 aagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaat 357  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| || |||||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaat 26534801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 399
Target Start/End: Complemental strand, 12794173 - 12794071
Alignment:
Q  298 aagaactgactcccgatctcgaatcaaaag-tgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaa 396  Q
    ||||||||||||| |||||||||||||||| ||||||| |||| ||||||||| ||||||  || ||| |||||||  |||| | | ||||||||||| |    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacaccccttacccctggttcactagagaaaca 12794074  T
Q  397 cca 399  Q
    |||    
T  12794073 cca 12794071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 13423535 - 13423482
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccacc 340  Q
    |||||||  |||||||| ||||| ||||||||||||||||||||||||||||||    
T  13423535 aacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 21266168 - 21266112
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaat 357  Q
    |||| |||||||||||||||||||||| |||||| ||||||| |||||| |||||||    
T  21266168 aactaactcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaat 21266112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 34105468 - 34105428
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccacca 341  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  34105468 aactgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 345
Target Start/End: Original strand, 7546464 - 7546499
Alignment:
Q  310 ccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||||||||||||||||||||||||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccaccagact 7546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 33968625 - 33968670
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatc 332  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||    
T  33968625 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatc 33968670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 32316437 - 32316393
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgat 331  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  32316437 aacttgaatcaaagaacttactaccgatctcgaatcaaaagtgat 32316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 34090418 - 34090374
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  34090418 aactgactcccgatctcgaatcaaaattgatcgacccaccagact 34090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 15132585 - 15132673
Alignment:
Q  337 caccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaaaccaaatcaagtcaaacaaagattgcagctag 427  Q
    ||||||||||||| || |||| | |||||||||||||||||||  ||||  |||| || |||| |||||||||||| | ||||||||||||    
T  15132585 caccagactttagaacaaaatcaacagggcacccctcgcccccagtacatcagag-aacaccatatcaagtcaaac-aggattgcagctag 15132673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 34092864 - 34092806
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||| ||||||||  |||| || ||||||||||||||||||||||  |||||||||    
T  34092864 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 34092806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 3254295 - 3254207
Alignment:
Q  18 ccacataaatacacccctgaagataaaccccaccaaaacacatcaccatctaaaa-agactccnnnnnnncaagcactgtaaacacggta 106  Q
    |||| |||| ||||||||||| ||||| |||||||||| ||||||||| |||||| |||||||       ||||||| ||||||||||||    
T  3254295 ccacctaaaaacacccctgaaaataaa-cccaccaaaatacatcaccacctaaaacagactccaaaaaaacaagcaccgtaaacacggta 3254207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 12129264 - 12129228
Alignment:
Q  309 cccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  12129264 cccgatctcgaatcaaaagtgatcggaccatcagact 12129228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 285 - 428
Target Start/End: Original strand, 35782 - 35925
Alignment:
Q  285 ccaacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatac 384  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||| |||| ||||| ||  |||||||||||  ||||||||||||||||| |||    
T  35782 ccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccctcgcccccggtac 35880  T
Q  385 actagagaaaaacc-aaatcaagtcaaacaaagattgcagctaga 428  Q
    || ||||||||||| |||| ||||||||||||||||||| |||||    
T  35881 accagagaaaaaccaaaattaagtcaaacaaagattgcaactaga 35925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 35588 - 35755
Alignment:
Q  87 caagcactgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaaactctcagatcccaacacccaagctga 186  Q
    |||||||||||||||| |||||||||||  |||||| |||| |||||||  | |||||||| || ||||  |||||| || | |||||||||||||||||    
T  35588 caagcactgtaaacacagtatccaccactgcccatcgtcac-actcacctgctaagaacactctaaaaa--aaactcccacaccccaacacccaagctga 35684  T
Q  187 gccacattacgaagaacacctaaccaaaggatcaagtagctatcacaaacctcgcgacctctgatccaccg 257  Q
    ||| |||| |||||| ||||||||| | |||||| | |||||||||||| |||| |||||| |||||||||    
T  35685 gcctcatttcgaagagcacctaaccgatggatcatgcagctatcacaaatctcgtgacctccgatccaccg 35755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 296 - 428
Target Start/End: Complemental strand, 36767 - 36636
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaaa 395  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||||| || |||||||||||| | | || ||||| |||||||     
T  36767 caaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccagagaaac 36668  T
Q  396 accaaatcaagtcaaacaaagattgcagctaga 428  Q
    ||||||||| | |||||||| ||||||||||||    
T  36667 accaaatcacgccaaacaaa-attgcagctaga 36636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 19452 - 19366
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctc 373  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||    
T  19452 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctc 19366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 42150 - 42236
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctc 373  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| || |||| || ||||||||||||    
T  42150 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctc 42236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 58196 - 58056
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacac 386  Q
    |||||||| |||| || ||||| ||||||| ||||||||||||||||| |||||| ||||||| |||||||  | ||||||||   | |||  | |||||    
T  58196 aacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcaccatacaccctaggtacac 58097  T
Q  387 tagagaaaaaccaaatcaagtcaaacaaagattgcagctaga 428  Q
     ||||||| ||||||||| | ||||| |||||||||||||||    
T  58096 cagagaaacaccaaatcacgccaaac-aagattgcagctaga 58056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 1038 - 1088
Alignment:
Q  296 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactt 346  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  1038 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactt 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 19177 - 19113
Alignment:
Q  92 actgtaaacacggtatccaccacctcccatcatcactactcacccacaaagaacaccctcaaaataaa 159  Q
    ||||||||||||||||| |||||| |   |||||||||||||||||||| ||||||||||||||||||    
T  19177 actgtaaacacggtatctaccaccgc---tcatcactactcacccacaatgaacaccctcaaaataaa 19113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 3885 - 3841
Alignment:
Q  301 aactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  3885 aactgactcccgatctcgaatcaaaattgatcggcccaccagact 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 8198 - 8140
Alignment:
Q  287 aacttgattcaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagact 345  Q
    ||||||| ||||||||  |||| || ||||||||||||||||||||||  |||||||||    
T  8198 aacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 47152 - 47055
Alignment:
Q  297 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagggcacccctcgcccccgatacactagagaaa 394  Q
    |||||||||| |  ||||||||||||||||||||| ||| |||||||| | ||   | ||| || |||||||||||| |||||| | ||| |||||||    
T  47152 aaagaactgatttacgatctcgaatcaaaagtgattggttcaccagacatcagggtctaatcagaagggcacccctcacccccggttcaccagagaaa 47055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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