View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2700_high_51 (Length: 293)
Name: NF2700_high_51
Description: NF2700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2700_high_51 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 17110929 - 17110669
Alignment:
| Q |
16 |
ataatacacacagtagacagcatgaggcggaaattaatagtttattgtgacagatttgaacaagaaattaattctgctataaaactcaatgttctttaag |
115 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
17110929 |
ataatacacacagttgacagcatgaggcggaaattaatagtttattgtgacagatttgaacaagaaattaattctgctataaaactcaatgttcttttag |
17110830 |
T |
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| Q |
116 |
aaactcaagaaacaaatcacgtcatctaataaagttgtacaaagtgttctatctatttgcttaaagtttaaaatagcatatgtcaccaattagccaggta |
215 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17110829 |
aaactcaaaaaacaaatcacgtcatctaataaagttgtacaaagtgttctatctatttgcttaaagtttaaaatagcatatgtcaccaattagccaggta |
17110730 |
T |
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| Q |
216 |
actacacacttcagtatgcataacaggagtccaaagatatcattcatgtttaataacaaaa |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17110729 |
actacacacttcagtatgcataacaggagtccaaagatatcattcatgtttaataacaaaa |
17110669 |
T |
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