View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2700_high_53 (Length: 293)
Name: NF2700_high_53
Description: NF2700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2700_high_53 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 40518106 - 40517831
Alignment:
| Q |
1 |
tccaatgatatattatatggtataccaatttaatgataatttagtgaaaagtagagaacagaaaaaactttactactctttttggtgaatttccttccag |
100 |
Q |
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| T |
40518106 |
tccaatgatatattatatggtataccaatttaatgataatttagtgaaaagtagagaacaaaaaaaactttactactctttttggtgaatttccttccag |
40518007 |
T |
|
| Q |
101 |
cagagctagcttggttaaacacgagatttgatcagacgttagtaaatgtgatatttagtattagcaggcaggtgacgagatcacacacaacaagtcttga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
40518006 |
cagagctagcttggttaaacacgagatttgatcagacgttagtaaatgtgatatttagtattagcaggcaggtgacgagatcagacacaacaagtcttga |
40517907 |
T |
|
| Q |
201 |
aggtagtattatatttataggctcctatggaatctttaaaactagtacttattatttatttttgctgattaaacaa |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
40517906 |
aggtagtattatatttataggctcctatggaatctttaaaactagtacttattatttgtttttgctgattaaacaa |
40517831 |
T |
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