View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2700_low_86 (Length: 227)
Name: NF2700_low_86
Description: NF2700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2700_low_86 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 46289064 - 46289280
Alignment:
| Q |
11 |
ctctagttgattaaatgttttaaaaaatcttgcattatcatcaaatgtatagcaatcaaatccagtttaattaaatagcgcacaaagattttaatttatt |
110 |
Q |
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| T |
46289064 |
ctctagttgattaaatgttttaaaaaatcttgcattatcatcaaatgtatagcaatcaaatccagtttaattaaatagcgcacaaagattttaatttatt |
46289163 |
T |
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| Q |
111 |
aggagaggtggtggtaatctagaggatacaaagttattgtgtaaaatgagtatgttgatttgtactccctgatagtaaacaaaaattaaattaaattcat |
210 |
Q |
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| T |
46289164 |
aggagaggtggtggtaatctagaggatacgaagttattgtgtaaaatgagtatgttgatttgtactccctgatagtaaacaaaaattaaattaaattcat |
46289263 |
T |
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| Q |
211 |
tcaattctaatttctat |
227 |
Q |
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| T |
46289264 |
tcaattctaatttctat |
46289280 |
T |
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