View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2700_low_89 (Length: 219)
Name: NF2700_low_89
Description: NF2700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2700_low_89 |
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Alignment Details
Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 14 - 204
Target Start/End: Complemental strand, 36651157 - 36650965
Alignment:
| Q |
14 |
attatactttaaaacctggttccccctaagcttaatttctgactccatccctgcttgtgatatttgaaaatacatattagcacttttggctgagattact |
113 |
Q |
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| T |
36651157 |
attatactttaaaacctggttccccctaagcttaatttctgactccatccctgcttgtgatatttgaaaatacatattagcacttttggctgagattact |
36651058 |
T |
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| Q |
114 |
gtgtagacgaaaaactgtaccatagctcacatttctaataaatgacaatgaaagtaga--gagaatacaatattttcctcggatagtcataaa |
204 |
Q |
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| T |
36651057 |
gtgtagacgaaaaactggaccatagctcacatttctaataaatgacaatgaaagtagagagagaatacaatattttcctcggatagtcataaa |
36650965 |
T |
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