View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2701_high_15 (Length: 428)

Name: NF2701_high_15
Description: NF2701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2701_high_15
NF2701_high_15
[»] chr4 (46 HSPs)
chr4 (146-428)||(52003230-52003512)
chr4 (45-147)||(21802113-21802215)
chr4 (45-146)||(22199429-22199530)
chr4 (45-146)||(46442014-46442115)
chr4 (45-145)||(36073519-36073619)
chr4 (46-148)||(10442579-10442682)
chr4 (45-148)||(44893005-44893108)
chr4 (45-146)||(53123201-53123302)
chr4 (45-145)||(44893596-44893696)
chr4 (45-143)||(9089040-9089138)
chr4 (45-143)||(24128409-24128507)
chr4 (45-146)||(2625007-2625108)
chr4 (45-146)||(36073121-36073222)
chr4 (45-146)||(47290236-47290337)
chr4 (45-146)||(49387681-49387782)
chr4 (45-145)||(33530479-33530579)
chr4 (45-149)||(50156370-50156473)
chr4 (45-147)||(7744905-7745007)
chr4 (45-146)||(4751617-4751718)
chr4 (45-146)||(31078613-31078714)
chr4 (45-143)||(17655600-17655699)
chr4 (45-135)||(23964269-23964359)
chr4 (48-146)||(11314045-11314144)
chr4 (45-146)||(37934735-37934837)
chr4 (47-145)||(42671840-42671939)
chr4 (45-146)||(37219801-37219903)
chr4 (45-114)||(30563379-30563448)
chr4 (55-143)||(24392854-24392942)
chr4 (53-145)||(36073256-36073349)
chr4 (79-145)||(25063369-25063436)
chr4 (53-149)||(44744610-44744703)
chr4 (69-141)||(33530676-33530749)
chr4 (69-128)||(36073731-36073791)
chr4 (69-141)||(10442777-10442850)
chr4 (69-141)||(31078807-31078880)
chr4 (69-141)||(49387876-49387949)
chr4 (272-310)||(51985520-51985558)
chr4 (69-141)||(2624841-2624914)
chr4 (69-141)||(7745100-7745173)
chr4 (69-141)||(21802310-21802383)
chr4 (69-141)||(22199265-22199338)
chr4 (69-141)||(24392671-24392744)
chr4 (69-141)||(36072951-36073024)
chr4 (69-141)||(46441848-46441921)
chr4 (69-141)||(47290070-47290143)
chr4 (69-141)||(50156566-50156639)
[»] chr7 (31 HSPs)
chr7 (45-149)||(45637881-45637985)
chr7 (45-147)||(35445567-35445669)
chr7 (45-145)||(24395141-24395241)
chr7 (48-146)||(15577641-15577739)
chr7 (45-146)||(3962148-3962249)
chr7 (45-146)||(15329444-15329545)
chr7 (45-145)||(34483008-34483108)
chr7 (45-147)||(42611981-42612083)
chr7 (45-147)||(48880720-48880822)
chr7 (45-145)||(30848739-30848839)
chr7 (45-143)||(4974532-4974630)
chr7 (45-145)||(35876414-35876514)
chr7 (61-145)||(25167651-25167735)
chr7 (45-136)||(29737314-29737406)
chr7 (55-153)||(15238564-15238662)
chr7 (55-144)||(37476876-37476965)
chr7 (53-149)||(42696261-42696358)
chr7 (48-143)||(20009895-20009991)
chr7 (55-146)||(18037157-18037248)
chr7 (69-141)||(15329277-15329350)
chr7 (81-145)||(36790271-36790336)
chr7 (69-141)||(48880915-48880988)
chr7 (69-141)||(4974723-4974796)
chr7 (69-141)||(35444562-35444635)
chr7 (69-141)||(42611815-42611888)
chr7 (69-141)||(45637716-45637789)
chr7 (72-155)||(15577841-15577925)
chr7 (79-145)||(40880641-40880706)
chr7 (69-141)||(3961983-3962056)
chr7 (69-114)||(15238414-15238459)
chr7 (69-141)||(34482839-34482912)
[»] chr5 (30 HSPs)
chr5 (45-148)||(14138837-14138940)
chr5 (45-145)||(8145543-8145643)
chr5 (45-147)||(4892372-4892474)
chr5 (45-150)||(3521797-3521902)
chr5 (45-145)||(33584124-33584224)
chr5 (45-147)||(37321586-37321688)
chr5 (45-146)||(25398408-25398509)
chr5 (45-145)||(6043307-6043407)
chr5 (45-144)||(3362949-3363048)
chr5 (45-142)||(12850972-12851069)
chr5 (45-145)||(2477806-2477906)
chr5 (45-145)||(38899520-38899621)
chr5 (45-147)||(12614530-12614633)
chr5 (55-145)||(22912852-22912942)
chr5 (45-124)||(11360947-11361026)
chr5 (55-153)||(17545469-17545567)
chr5 (45-103)||(4433845-4433903)
chr5 (69-145)||(27482017-27482095)
chr5 (69-141)||(12614721-12614794)
chr5 (52-108)||(13664736-13664792)
chr5 (69-141)||(22913042-22913115)
chr5 (69-141)||(2477640-2477713)
chr5 (69-141)||(6043499-6043572)
chr5 (69-133)||(8145387-8145452)
chr5 (69-141)||(11361119-11361192)
chr5 (69-114)||(17545673-17545718)
chr5 (45-114)||(31640767-31640836)
chr5 (69-114)||(31640928-31640973)
chr5 (74-114)||(10458429-10458469)
chr5 (45-105)||(36880148-36880213)
[»] chr3 (39 HSPs)
chr3 (45-158)||(34482670-34482783)
chr3 (45-145)||(19650695-19650795)
chr3 (45-146)||(3137208-3137309)
chr3 (45-146)||(3456234-3456335)
chr3 (45-146)||(22426139-22426240)
chr3 (45-146)||(33113964-33114065)
chr3 (45-146)||(37216847-37216948)
chr3 (45-145)||(3574321-3574421)
chr3 (45-145)||(30385570-30385670)
chr3 (45-144)||(8320378-8320477)
chr3 (45-146)||(6042047-6042148)
chr3 (45-145)||(3089589-3089689)
chr3 (45-143)||(33145882-33145980)
chr3 (45-146)||(48161076-48161177)
chr3 (45-145)||(2754889-2754989)
chr3 (45-145)||(37522223-37522323)
chr3 (53-146)||(36864826-36864920)
chr3 (55-146)||(40328011-40328103)
chr3 (45-145)||(47738281-47738382)
chr3 (55-146)||(8361833-8361924)
chr3 (45-145)||(26612916-26613017)
chr3 (45-133)||(33839705-33839794)
chr3 (45-143)||(42921295-42921394)
chr3 (55-145)||(9796824-9796914)
chr3 (46-145)||(24343720-24343820)
chr3 (55-147)||(41224414-41224506)
chr3 (45-144)||(46919064-46919164)
chr3 (45-105)||(42298032-42298092)
chr3 (56-125)||(41883036-41883106)
chr3 (69-141)||(6041888-6041961)
chr3 (69-141)||(2754721-2754794)
chr3 (69-141)||(3137402-3137475)
chr3 (69-141)||(3574515-3574588)
chr3 (69-114)||(8362033-8362078)
chr3 (69-114)||(9797017-9797062)
chr3 (45-82)||(11347439-11347476)
chr3 (69-133)||(19650888-19650953)
chr3 (69-133)||(47738117-47738182)
chr3 (69-141)||(33145717-33145789)
[»] chr8 (45 HSPs)
chr8 (45-145)||(6108028-6108128)
chr8 (45-149)||(26041904-26042008)
chr8 (45-148)||(40779921-40780024)
chr8 (45-147)||(32064916-32065018)
chr8 (45-147)||(37985849-37985951)
chr8 (45-145)||(10044518-10044618)
chr8 (45-145)||(17841645-17841745)
chr8 (45-145)||(25581034-25581134)
chr8 (45-145)||(30055686-30055786)
chr8 (45-144)||(14129029-14129128)
chr8 (45-148)||(15187730-15187833)
chr8 (45-143)||(24211169-24211267)
chr8 (51-148)||(1503635-1503732)
chr8 (45-146)||(1645758-1645859)
chr8 (46-149)||(38017103-38017207)
chr8 (45-143)||(20091598-20091696)
chr8 (45-143)||(34665551-34665649)
chr8 (45-145)||(3596836-3596936)
chr8 (45-145)||(42754837-42754937)
chr8 (45-134)||(39772608-39772697)
chr8 (46-143)||(37132477-37132575)
chr8 (57-146)||(31347570-31347659)
chr8 (45-133)||(32394027-32394114)
chr8 (45-133)||(35353211-35353299)
chr8 (45-120)||(8454003-8454078)
chr8 (53-114)||(41819594-41819655)
chr8 (55-146)||(7022159-7022250)
chr8 (65-147)||(30834848-30834931)
chr8 (53-142)||(3890412-3890502)
chr8 (55-146)||(7017652-7017743)
chr8 (69-141)||(26042104-26042177)
chr8 (45-153)||(24844646-24844756)
chr8 (69-142)||(24844847-24844920)
chr8 (69-141)||(8453838-8453911)
chr8 (69-114)||(15972865-15972910)
chr8 (69-141)||(27782105-27782178)
chr8 (48-105)||(27835288-27835345)
chr8 (69-141)||(32064749-32064822)
chr8 (69-141)||(34665386-34665459)
chr8 (69-141)||(17841838-17841911)
chr8 (69-141)||(20091789-20091862)
chr8 (69-106)||(25581227-25581264)
chr8 (69-114)||(31347770-31347815)
chr8 (69-141)||(40780117-40780190)
chr8 (69-133)||(42755030-42755095)
[»] chr2 (31 HSPs)
chr2 (45-145)||(9293370-9293470)
chr2 (45-145)||(10662058-10662158)
chr2 (45-145)||(33380377-33380477)
chr2 (45-145)||(35160929-35161029)
chr2 (45-146)||(13355018-13355119)
chr2 (45-141)||(3989246-3989342)
chr2 (45-145)||(7475303-7475403)
chr2 (45-145)||(23267857-23267957)
chr2 (45-142)||(31174633-31174730)
chr2 (45-146)||(22592880-22592984)
chr2 (55-147)||(43331092-43331184)
chr2 (45-114)||(16767288-16767357)
chr2 (55-143)||(21393483-21393570)
chr2 (55-145)||(9723586-9723677)
chr2 (45-114)||(21936252-21936321)
chr2 (55-124)||(37335824-37335894)
chr2 (55-106)||(34320991-34321042)
chr2 (69-141)||(9723409-9723482)
chr2 (69-141)||(14941354-14941427)
chr2 (69-133)||(27847644-27847709)
chr2 (45-105)||(14941199-14941259)
chr2 (69-141)||(9293564-9293637)
chr2 (70-115)||(37335744-37335789)
chr2 (100-145)||(39819272-39819317)
chr2 (69-141)||(7475496-7475569)
chr2 (69-141)||(10661891-10661964)
chr2 (69-141)||(21936085-21936158)
chr2 (69-141)||(23268050-23268123)
chr2 (69-133)||(31174822-31174887)
chr2 (69-141)||(35160761-35160834)
chr2 (69-141)||(43330916-43330989)
[»] chr1 (32 HSPs)
chr1 (45-145)||(37821629-37821729)
chr1 (45-146)||(20304924-20305025)
chr1 (45-146)||(44094867-44094968)
chr1 (45-146)||(51737675-51737776)
chr1 (45-145)||(25973577-25973677)
chr1 (45-148)||(19015574-19015677)
chr1 (45-144)||(40215158-40215257)
chr1 (45-155)||(3559787-3559897)
chr1 (45-146)||(18404618-18404719)
chr1 (45-146)||(36966502-36966603)
chr1 (45-146)||(41876236-41876337)
chr1 (45-145)||(25463846-25463946)
chr1 (45-145)||(6883657-6883757)
chr1 (45-145)||(9910086-9910186)
chr1 (69-145)||(19722894-19722970)
chr1 (55-146)||(33786425-33786516)
chr1 (55-145)||(32000061-32000151)
chr1 (55-148)||(40273888-40273981)
chr1 (48-143)||(44690818-44690914)
chr1 (45-146)||(10167569-10167671)
chr1 (73-156)||(52064361-52064445)
chr1 (69-142)||(33786623-33786696)
chr1 (69-141)||(40273706-40273779)
chr1 (53-146)||(27523049-27523143)
chr1 (69-141)||(6883491-6883564)
chr1 (69-141)||(16045786-16045859)
chr1 (69-141)||(32000255-32000328)
chr1 (69-141)||(40214992-40215065)
chr1 (53-108)||(52329453-52329508)
chr1 (69-141)||(18404446-18404519)
chr1 (69-141)||(25463680-25463753)
chr1 (69-141)||(44094702-44094775)
[»] scaffold0228 (6 HSPs)
scaffold0228 (45-146)||(26106-26207)
scaffold0228 (45-146)||(16154-16255)
scaffold0228 (45-78)||(8572-8605)
scaffold0228 (69-133)||(8414-8479)
scaffold0228 (69-133)||(15996-16061)
scaffold0228 (69-133)||(25948-26013)
[»] chr6 (27 HSPs)
chr6 (45-146)||(28675318-28675419)
chr6 (45-146)||(32702375-32702476)
chr6 (45-146)||(33696867-33696968)
chr6 (45-145)||(17175816-17175916)
chr6 (45-146)||(17705263-17705363)
chr6 (45-145)||(18365369-18365469)
chr6 (45-145)||(18370633-18370733)
chr6 (45-146)||(23290875-23290976)
chr6 (45-145)||(33695121-33695221)
chr6 (45-145)||(2309218-2309318)
chr6 (48-143)||(6031537-6031632)
chr6 (45-114)||(18889470-18889539)
chr6 (55-143)||(11548386-11548474)
chr6 (45-146)||(29693615-29693717)
chr6 (45-104)||(6127447-6127506)
chr6 (79-144)||(34238883-34238948)
chr6 (69-141)||(17176009-17176082)
chr6 (69-141)||(17705453-17705526)
chr6 (69-141)||(33695315-33695388)
chr6 (69-141)||(33696700-33696773)
chr6 (67-145)||(582522-582602)
chr6 (92-145)||(2121004-2121058)
chr6 (69-141)||(6127279-6127352)
chr6 (69-114)||(11548576-11548621)
chr6 (69-141)||(23291072-23291145)
chr6 (69-141)||(28675152-28675225)
chr6 (45-77)||(9752109-9752141)
[»] scaffold0085 (2 HSPs)
scaffold0085 (45-145)||(48019-48119)
scaffold0085 (69-141)||(47854-47927)
[»] scaffold0471 (1 HSPs)
scaffold0471 (45-143)||(13012-13110)
[»] scaffold0096 (2 HSPs)
scaffold0096 (45-155)||(41180-41290)
scaffold0096 (69-141)||(41015-41088)
[»] scaffold0204 (1 HSPs)
scaffold0204 (45-145)||(4566-4666)
[»] scaffold0178 (2 HSPs)
scaffold0178 (45-145)||(11791-11891)
scaffold0178 (69-141)||(11625-11698)
[»] scaffold0041 (1 HSPs)
scaffold0041 (79-145)||(85577-85642)


Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 146 - 428
Target Start/End: Original strand, 52003230 - 52003512
Alignment:
Q  146 taaataaaatggccaaaagaaaaatggacaaacc-ttcatgcnnnnnnnnntactaacaagcaaaaccccgccgtaatttgtgcttttttgaaccttaat 244  Q
    |||||||||||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52003230 taaataaaatggccaaaagaaaaatggacaaacccttcatgcaaaaaaaaatactaacaagcaaaaccccgccgtaatttgtgcttttttgaaccttaat 52003329  T
Q  245 agcaaagaaagcaatggaactcgcagcagatactcaagtgacctccaaagcatgcgacatataaaaagtggaagaagtaaattttcaaatagatcaacaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||||||||    
T  52003330 agcaaagaaagcaatggaactcgcagcagatactcaagtgacctccaaagcttgtgacctataaaaagtggaaaaagtaaattttcaaatagatcaacaa 52003429  T
Q  345 taacaagacaaattagggagaaaaacaagtatataaagatcattaatccaacacaatctaaaataaaattgttgtaaattagtg 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||    
T  52003430 taacaagacaaattagggagaaaaacaagtatataaagatcattaatccaacacaatctaaaa-aaatttgctataaattagtg 52003512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 21802215 - 21802113
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  145 cta 147  Q
    |||    
T  21802115 cta 21802113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 22199429 - 22199530
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T
Q  145 ct 146  Q
    ||    
T  22199529 ct 22199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 46442014 - 46442115
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  46442014 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 46442113  T
Q  145 ct 146  Q
    ||    
T  46442114 ct 46442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 36073519 - 36073619
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  36073519 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 36073618  T
Q  145 c 145  Q
    |    
T  36073619 c 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 10442682 - 10442579
Alignment:
Q  46 tgaaagattaa-taaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  145 ctaa 148  Q
    ||||    
T  10442582 ctaa 10442579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 44893108 - 44893005
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  44893108 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893009  T
Q  145 ctaa 148  Q
    ||||    
T  44893008 ctaa 44893005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 53123201 - 53123302
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  53123201 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 53123300  T
Q  145 ct 146  Q
    ||    
T  53123301 ct 53123302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 44893596 - 44893696
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  44893596 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 44893695  T
Q  145 c 145  Q
    |    
T  44893696 c 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 9089040 - 9089138
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  9089040 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 24128409 - 24128507
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  24128409 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 2625007 - 2625108
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T
Q  145 ct 146  Q
    ||    
T  2625107 ct 2625108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 36073121 - 36073222
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T
Q  145 ct 146  Q
    ||    
T  36073221 ct 36073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 47290236 - 47290337
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  47290236 atgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 47290335  T
Q  145 ct 146  Q
    ||    
T  47290336 ct 47290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 49387782 - 49387681
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||| |||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T
Q  145 ct 146  Q
    ||    
T  49387682 ct 49387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  145 c 145  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 50156473 - 50156370
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  50156473 atgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 50156375  T
Q  145 ctaaa 149  Q
    |||||    
T  50156374 ctaaa 50156370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 7745007 - 7744905
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  7745007 atgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 7744908  T
Q  145 cta 147  Q
    |||    
T  7744907 cta 7744905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 4751617 - 4751718
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||| |||||| |||||||||||||||    
T  4751617 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttc 4751716  T
Q  145 ct 146  Q
    ||    
T  4751717 ct 4751718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 31078714 - 31078613
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  31078714 atgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttc 31078615  T
Q  145 ct 146  Q
    ||    
T  31078614 ct 31078613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatct 135  Q
    ||||||||||||||||||||| |||||||||||| |||||||| || |||||||||||| |||||||||||||||||||||||| ||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 11314144 - 11314045
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 146  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 37934837 - 37934735
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||| ||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T
Q  144 cct 146  Q
    |||    
T  37934737 cct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  47 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 145  Q
    ||||| |||| |||||||||| ||||||||   |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 37219801 - 37219903
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| || |||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  144 cct 146  Q
    |||    
T  37219901 cct 37219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 30563379 - 30563448
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  30563379 atgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||||||||||| | |||||||||||  ||||||||||| ||| ||||||   ||||||||||| ||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 145  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| |||||||||| ||||||||||| ||| |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 145  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 44744610 - 44744703
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcctaaa 149  Q
    ||||||||| |||||||||||||| | | ||||||| ||||||||||||||||||||   | ||||||||||| || ||||||| ||||||| ||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttcttaaa 44744703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||| ||||| |||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 36073731 - 36073791
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattctt 128  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttctt 36073791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 51985558 - 51985520
Alignment:
Q  272 agatactcaagtgacctccaaagcatgcgacatataaaa 310  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  51985558 agataatcaagtgacctccaaagcatgcgacctataaaa 51985520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||| |||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| | |||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||| ||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||| |||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 50156566 - 50156639
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcatt 50156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 45637881 - 45637985
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T
Q  145 ctaaa 149  Q
    |||||    
T  45637981 ctaaa 45637985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 35445567 - 35445669
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  145 cta 147  Q
    |||    
T  35445667 cta 35445669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 24395141 - 24395241
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  24395141 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttc 24395240  T
Q  145 c 145  Q
    |    
T  24395241 c 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 15577739 - 15577641
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 15577641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 3962148 - 3962249
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  3962148 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttc 3962247  T
Q  145 ct 146  Q
    ||    
T  3962248 ct 3962249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 15329444 - 15329545
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  145 ct 146  Q
    ||    
T  15329544 ct 15329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  145 c 145  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 42611981 - 42612083
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  42611981 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 42612080  T
Q  145 cta 147  Q
    |||    
T  42612081 cta 42612083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 48880822 - 48880720
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  48880822 atgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 48880723  T
Q  145 cta 147  Q
    |||    
T  48880722 cta 48880720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 30848739 - 30848839
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T
Q  145 c 145  Q
    |    
T  30848839 c 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  || |||||||||||||||||||| |||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  145 c 145  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  61 tgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatcta 136  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||||| |||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 15238564 - 15238662
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcctaaataaa 153  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||   ||||||||||| ||||||||||||||||||| ||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcctaattaaa 15238662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||   ||||||||||| |||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 42696261 - 42696358
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcctaaa 149  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||| || ||||||||||| || ||||||| ||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcctaaa 42696358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    |||| ||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||| || |||||||||||| | ||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 18037157 - 18037248
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 146  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||||||| ||||||||||   |||||||| || |||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcct 18037248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  81 gattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 145  Q
    ||||||||||||||||||||||||||||||| || |||||| |||| || |||| |||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 15577841 - 15577925
Alignment:
Q  72 tctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcctaaataaaat 155  Q
    ||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||   |||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctctaaataaaat 15577925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    |||||||||||| ||||| ||| || ||||||||  || ||||||||||| ||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 3962056 - 3961983
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 6e-47; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 14138837 - 14138940
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14138837 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 14138936  T
Q  145 ctaa 148  Q
    ||||    
T  14138937 ctaa 14138940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 8145543 - 8145643
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T
Q  145 c 145  Q
    |    
T  8145643 c 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 4892372 - 4892474
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  4892372 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 4892471  T
Q  145 cta 147  Q
    |||    
T  4892472 cta 4892474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 3521902 - 3521797
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  3521902 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3521803  T
Q  145 ctaaat 150  Q
    ||||||    
T  3521802 ctaaat 3521797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 33584224 - 33584124
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  33584224 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33584125  T
Q  145 c 145  Q
    |    
T  33584124 c 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 37321688 - 37321586
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  37321688 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttc 37321589  T
Q  145 cta 147  Q
    |||    
T  37321588 cta 37321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 25398408 - 25398509
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  25398408 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttc 25398507  T
Q  145 ct 146  Q
    ||    
T  25398508 ct 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 6043407 - 6043307
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T
Q  145 c 145  Q
    |    
T  6043307 c 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattt 142  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 2477806 - 2477906
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  2477806 atgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 2477905  T
Q  145 c 145  Q
    |    
T  2477906 c 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 38899621 - 38899520
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa-tctttcttataaaatcattcttaatatctagcatttt 143  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||| ||||||||||||||    
T  38899621 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcatttt 38899522  T
Q  144 cc 145  Q
    ||    
T  38899521 cc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 12614633 - 12614530
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||||| ||| ||||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  144 ccta 147  Q
    ||||    
T  12614533 ccta 12614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||| ||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 11361026 - 11360947
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcat 124  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  11361026 atgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 17545567 - 17545469
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcctaaataaa 153  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||   ||||||||||| ||||||||||||||||||| ||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcctaattaaa 17545469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 4433903 - 4433845
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattctt 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 27482017 - 27482095
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattc-ttaatatctagcattttcc 145  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| || |||||||||||| ||||||||||  |||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctttaatatctaatattttcc 27482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||  ||||| |||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  52 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatc 108  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||| |||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| |  |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 31640836 - 31640767
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||| ||||||||| |||    |||||||||  ||||||| || |||||||||||||||||||||||    
T  31640836 atgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||| ||||| || |||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 114
Target Start/End: Complemental strand, 10458469 - 10458429
Alignment:
Q  74 taaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttctt 10458429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 36880213 - 36880148
Alignment:
Q  45 atgaaagattaataaatgagactgaaa-tctaaaggtgattat----tgtgtcatgtcattcttga 105  Q
    ||||||| |||||| |||||||||||| ||||| |||||||||    |||||||||||||||||||    
T  36880213 atgaaaggttaatagatgagactgaaaatctaagggtgattatatattgtgtcatgtcattcttga 36880148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 34482783 - 34482670
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  145 ctaaataaaatggc 158  Q
    || | |||||||||    
T  34482683 cttattaaaatggc 34482670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 19650795 - 19650695
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19650795 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 19650696  T
Q  145 c 145  Q
    |    
T  19650695 c 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 3137309 - 3137208
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  3137309 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 3137210  T
Q  145 ct 146  Q
    ||    
T  3137209 ct 3137208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 3456234 - 3456335
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3456234 atgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 3456333  T
Q  145 ct 146  Q
    ||    
T  3456334 ct 3456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 22426240 - 22426139
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22426240 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 22426141  T
Q  145 ct 146  Q
    ||    
T  22426140 ct 22426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 33113964 - 33114065
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T
Q  145 ct 146  Q
    ||    
T  33114064 ct 33114065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 37216948 - 37216847
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37216849  T
Q  145 ct 146  Q
    ||    
T  37216848 ct 37216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 3574421 - 3574321
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  3574421 atgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 3574322  T
Q  145 c 145  Q
    |    
T  3574321 c 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 30385570 - 30385670
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttc 30385669  T
Q  145 c 145  Q
    |    
T  30385670 c 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 6042047 - 6042148
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  145 ct 146  Q
    ||    
T  6042147 ct 6042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 3089589 - 3089689
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  145 c 145  Q
    |    
T  3089689 c 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 48161076 - 48161177
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||||||||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  145 ct 146  Q
    ||    
T  48161176 ct 48161177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 2754889 - 2754989
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  145 c 145  Q
    |    
T  2754989 c 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 37522223 - 37522323
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 37522322  T
Q  145 c 145  Q
    |    
T  37522323 c 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 36864920 - 36864826
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 146  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcct 36864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 40328011 - 40328103
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 146  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcct 40328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  144 cc 145  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 8361924 - 8361833
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 146  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||| |||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 8361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  144 cc 145  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||   ||||||||||| ||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  46 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttc 144  Q
    |||||| ||||||||| |||||||||||||| |||||||||  | ||||||||||||||||||||| || |||||||||||||| ||||||| |||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  145 c 145  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 41224414 - 41224506
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttccta 147  Q
    ||||||||||| |||||| ||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||| ||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttccta 41224506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| || ||||||||| |||||||||| || |||||||||||||| ||||||| ||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  144 c 144  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 42298032 - 42298092
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 105  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 41883106 - 41883036
Alignment:
Q  56 ataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcatt 125  Q
    |||||| ||||||||||| |||| |||||||| |  ||||||||||||||||||||||| |||||||||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatt 41883036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    ||||||||||||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 9797017 - 9797062
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 9797062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 11347439 - 11347476
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtga 82  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11347439 atgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||||||| |||||| || ||| |||||||||||| |||||| |||||||| ||||| ||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  ||| | |||||||| ||||| |||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 4e-45; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 6108128 - 6108028
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6108128 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6108029  T
Q  145 c 145  Q
    |    
T  6108028 c 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 26042008 - 26041904
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  26042008 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26041909  T
Q  145 ctaaa 149  Q
    |||||    
T  26041908 ctaaa 26041904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 40780024 - 40779921
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  40780024 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 40779925  T
Q  145 ctaa 148  Q
    ||||    
T  40779924 ctaa 40779921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 32064916 - 32065018
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T
Q  145 cta 147  Q
    |||    
T  32065016 cta 32065018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 37985951 - 37985849
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37985951 atgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37985852  T
Q  145 cta 147  Q
    |||    
T  37985851 cta 37985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  145 c 145  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 17841745 - 17841645
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  17841745 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 17841646  T
Q  145 c 145  Q
    |    
T  17841645 c 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 25581134 - 25581034
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  25581134 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25581035  T
Q  145 c 145  Q
    |    
T  25581034 c 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 30055686 - 30055786
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T
Q  145 c 145  Q
    |    
T  30055786 c 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 15187730 - 15187833
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T
Q  145 ctaa 148  Q
    ||||    
T  15187830 ctaa 15187833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 1503732 - 1503635
Alignment:
Q  51 gattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcctaa 148  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctaa 1503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 1645859 - 1645758
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T
Q  145 ct 146  Q
    ||    
T  1645759 ct 1645758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 38017103 - 38017207
Alignment:
Q  46 tgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttt 38017202  T
Q  145 ctaaa 149  Q
    |||||    
T  38017203 ctaaa 38017207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 20091696 - 20091598
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20091696 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 3596936 - 3596836
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  3596936 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3596837  T
Q  145 c 145  Q
    |    
T  3596836 c 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 42754937 - 42754837
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T
Q  145 c 145  Q
    |    
T  42754837 c 42754837  T

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Target: chr8; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatc 134  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

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Target: chr8; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  46 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 31347659 - 31347570
Alignment:
Q  57 taaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 146  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||| |||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 31347570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatat 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||| ||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

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Target: chr8; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 35353211 - 35353299
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatat 133  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  35353211 atgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 8454003 - 8454078
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  8454003 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

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Target: chr8; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 7022159 - 7022250
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 146  Q
    |||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||   |||||||| || |||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcct 7022250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 30834931 - 30834848
Alignment:
Q  65 actgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttccta 147  Q
    |||||||||||| |||| ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttccta 30834848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattt 142  Q
    ||||||||| ||| | |||||||| |||||||||| || ||| ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 7017743 - 7017652
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 146  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||| |||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcct 7017652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 24844756 - 24844646
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    ||||||| ||||||| | ||| | ||||||||  ||||||||| || |||| ||||||| |||||||||| ||||||||||| || ||||||| ||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  144 cc-taaataaa 153  Q
    || ||||||||    
T  24844656 ccataaataaa 24844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattt 142  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||  ||||| |||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||| ||||||||||||| |||||||  ||||| |||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 27835345 - 27835288
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 105  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||| ||||| ||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||| |||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaa 106  Q
    ||||||||||||||||||| || |||||||||||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 31347770 - 31347815
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 31347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 9293470 - 9293370
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T
Q  145 c 145  Q
    |    
T  9293370 c 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 10662058 - 10662158
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T
Q  145 c 145  Q
    |    
T  10662158 c 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 33380377 - 33380477
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  33380377 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 33380476  T
Q  145 c 145  Q
    |    
T  33380477 c 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 35160929 - 35161029
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T
Q  145 c 145  Q
    |    
T  35161029 c 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 13355018 - 13355119
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T
Q  145 ct 146  Q
    ||    
T  13355118 ct 13355119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 3989246 - 3989342
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatt 141  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  3989246 atgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 7475403 - 7475303
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  7475403 atgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 7475304  T
Q  145 c 145  Q
    |    
T  7475303 c 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 23267957 - 23267857
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  23267957 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 23267858  T
Q  145 c 145  Q
    |    
T  23267857 c 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 31174730 - 31174633
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattt 142  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31174730 atgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 22592880 - 22592984
Alignment:
Q  45 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  142 ttcct 146  Q
    |||||    
T  22592980 ttcct 22592984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 43331092 - 43331184
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttccta 147  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||   ||||||||||| ||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccta 43331184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||   ||||||||||| ||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 9723586 - 9723677
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 145  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||| || ||||||||||| ||||||| ||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 21936252 - 21936321
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  21936252 atgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcat 124  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa 106  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 9723482 - 9723409
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||| |||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 105  Q
    ||||||| ||||||||| ||| |||||||||| | ||||||||||||||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  70 aatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 115  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  100 tcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| | ||||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| ||| || | |||||| ||||| |||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 37821729 - 37821629
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  37821729 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 37821630  T
Q  145 c 145  Q
    |    
T  37821629 c 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 20305025 - 20304924
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  145 ct 146  Q
    ||    
T  20304925 ct 20304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 44094867 - 44094968
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  44094867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttc 44094966  T
Q  145 ct 146  Q
    ||    
T  44094967 ct 44094968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 51737675 - 51737776
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  51737675 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 51737774  T
Q  145 ct 146  Q
    ||    
T  51737775 ct 51737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 25973577 - 25973677
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T
Q  145 c 145  Q
    |    
T  25973677 c 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 19015574 - 19015677
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  19015574 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttc 19015673  T
Q  145 ctaa 148  Q
    ||||    
T  19015674 ctaa 19015677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 40215158 - 40215257
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40215158 atgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 3559787 - 3559897
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  145 ctaaataaaat 155  Q
    | |||| ||||    
T  3559887 ccaaattaaat 3559897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 18404618 - 18404719
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  145 ct 146  Q
    ||    
T  18404718 ct 18404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 36966603 - 36966502
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||||||    
T  36966603 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttc 36966504  T
Q  145 ct 146  Q
    ||    
T  36966503 ct 36966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 41876337 - 41876236
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  41876337 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 41876238  T
Q  145 ct 146  Q
    ||    
T  41876237 ct 41876236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 25463846 - 25463946
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  25463846 atgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 25463945  T
Q  145 c 145  Q
    |    
T  25463946 c 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 6883657 - 6883757
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6883657 atgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 6883756  T
Q  145 c 145  Q
    |    
T  6883757 c 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 9910186 - 9910086
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T
Q  145 c 145  Q
    |    
T  9910086 c 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 33786516 - 33786425
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 146  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||| |||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 33786425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||| ||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 148
Target Start/End: Original strand, 40273888 - 40273981
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcctaa 148  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||| |||||||||||||| ||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttttctaa 40273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 44690914 - 44690818
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||| |||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||| || ||||||| ||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 10167569 - 10167671
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaat-ctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| |||| | |||||| |||  ||| ||||||||||||||||||||| || ||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  144 cct 146  Q
    |||    
T  10167669 cct 10167671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 52064445 - 52064361
Alignment:
Q  73 ctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcctaaataaaatg 156  Q
    |||| ||||| |||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||| |||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttcttaaattaaatg 52064361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattt 142  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||| ||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 27523143 - 27523049
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcct 146  Q
    ||||||||| ||||| ||||| || |||||||| | || |||   ||||||||||||||||| |||||||||||||| |||| || |||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcct 27523049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||| ||||| ||||||||||||||||||| |||||| | |||||| ||||| |||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  53 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatc 108  Q
    ||||||| | |||||||||||||| |||||||||| ||  ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    ||||||||||||||||||| |  |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||| |||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 90; Significance: 2e-43; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 26106 - 26207
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  26106 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 26205  T
Q  145 ct 146  Q
    ||    
T  26206 ct 26207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 16154 - 16255
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  16154 atgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 16253  T
Q  145 ct 146  Q
    ||    
T  16254 ct 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 8572 - 8605
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaag 78  Q
    ||||||||||||||||||||||||||||||||||    
T  8572 atgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 133  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 28675318 - 28675419
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T
Q  145 ct 146  Q
    ||    
T  28675418 ct 28675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 32702375 - 32702476
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 32702474  T
Q  145 ct 146  Q
    ||    
T  32702475 ct 32702476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 33696867 - 33696968
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T
Q  145 ct 146  Q
    ||    
T  33696967 ct 33696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 17175916 - 17175816
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17175916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17175817  T
Q  145 c 145  Q
    |    
T  17175816 c 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 17705363 - 17705263
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T
Q  145 ct 146  Q
    ||    
T  17705264 ct 17705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 18365469 - 18365369
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T
Q  145 c 145  Q
    |    
T  18365369 c 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 18370733 - 18370633
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T
Q  145 c 145  Q
    |    
T  18370633 c 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 23290976 - 23290875
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  145 ct 146  Q
    ||    
T  23290876 ct 23290875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 33695221 - 33695121
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T
Q  145 c 145  Q
    |    
T  33695121 c 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 2309318 - 2309218
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T
Q  145 c 145  Q
    |    
T  2309218 c 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 6031632 - 6031537
Alignment:
Q  48 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| ||||| || |||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 18889539 - 18889470
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  55 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||   ||||||||||| ||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 29693615 - 29693717
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 143  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| || |||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  144 cct 146  Q
    |||    
T  29693715 cct 29693717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 6127447 - 6127506
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttg 104  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||| |||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  ||| || |||||||| ||||| |||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  67 tgaaatctaaaggtgattattgtgtc-atgtcattcttgaatctttctta-taaaatcattcttaatatctagcattttcc 145  Q
    |||||||||| |||||||||| || | || |||||||| ||| ||||||| ||||||||||||| ||||||| ||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 2121058 - 2121004
Alignment:
Q  92 catgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 145  Q
    |||||||||||||||||||| || ||||||||||| || ||||||| ||||||||    
T  2121058 catgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 11548576 - 11548621
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 114  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 11548621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| ||||||||||  | |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 9752141 - 9752109
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaa 77  Q
    ||||||| |||||||||||||||||||||||||    
T  9752141 atgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 48019 - 48119
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48019 atgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 48118  T
Q  145 c 145  Q
    |    
T  48119 c 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 13012 - 13110
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcatttt 143  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  13012 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 41180 - 41290
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41180 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 41279  T
Q  145 ctaaataaaat 155  Q
    | ||| |||||    
T  41280 caaaaaaaaat 41290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttg-aatctttcttataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| || ||||||||||||| ||| ||| | |||||||| ||||| |||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 4566 - 4666
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  4566 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttc 4665  T
Q  145 c 145  Q
    |    
T  4666 c 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 11791 - 11891
Alignment:
Q  45 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||||| |||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T
Q  145 c 145  Q
    |    
T  11891 c 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  69 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatt 141  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  79 gtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 145  Q
    |||||||||||| ||||| ||| || ||||||||  || ||||||||||| ||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

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