View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2701_low_39 (Length: 244)
Name: NF2701_low_39
Description: NF2701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2701_low_39 |
 | |
|
| [»] scaffold0055 (7 HSPs) |
| | |
|
| [»] scaffold0052 (8 HSPs) |
| | |
|
| [»] scaffold0021 (2 HSPs) |
| | |
|
| [»] scaffold0515 (1 HSPs) |
| | |
|
| [»] scaffold0306 (1 HSPs) |
| | |
|
| [»] scaffold0152 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0055 (Bit Score: 212; Significance: 1e-116; HSPs: 7)
Name: scaffold0055
Description:
Target: scaffold0055; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 50566 - 50777
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50566 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
50665 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50666 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
50765 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
50766 |
acctgttattgc |
50777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 79567 - 79778
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79567 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
79666 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79667 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
79766 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
79767 |
acctgttattgc |
79778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 41318 - 41529
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41318 |
caaagggcagggacgtagtcaacgcgtgctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
41417 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41418 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
41517 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
41518 |
acctgttattgc |
41529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 72067 - 71856
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
72067 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgtcgaagaccaacaattgcaatgatctatccccatcacgatg |
71968 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
71967 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
71868 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
71867 |
acctgttattgc |
71856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 66189 - 66400
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
66189 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatcttcatcacgatg |
66288 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
66289 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
66388 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
66389 |
acctgttattgc |
66400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #6
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 43 - 226
Target Start/End: Original strand, 32032 - 32215
Alignment:
| Q |
43 |
ctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32032 |
ctgatgactcgcgcttactaggaattcctcattgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
32131 |
T |
|
| Q |
143 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32132 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
32215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 69088 - 69232
Alignment:
| Q |
82 |
caacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgc |
181 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
69088 |
caacaattgcaatgatctatcttcatcacgatgaaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgc |
69187 |
T |
|
| Q |
182 |
gcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
226 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
69188 |
gcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
69232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052 (Bit Score: 212; Significance: 1e-116; HSPs: 8)
Name: scaffold0052
Description:
Target: scaffold0052; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 25091 - 25302
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25091 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
25190 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25191 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
25290 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25291 |
acctgttattgc |
25302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 30885 - 30674
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30885 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
30786 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30785 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
30686 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
30685 |
acctgttattgc |
30674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 47473 - 47684
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47473 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
47572 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47573 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
47672 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
47673 |
acctgttattgc |
47684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 5921 - 6132
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921 |
caaagggcagggacgtagtcaacgcgtgctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
6020 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6021 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
6120 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6121 |
acctgttattgc |
6132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 26953 - 27164
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26953 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgtcgaagaccaacaattgcaatgatctatccccatcacgatg |
27052 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27053 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
27152 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
27153 |
acctgttattgc |
27164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 35739 - 35528
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
35739 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatcttcatcacgatg |
35640 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35639 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
35540 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
35539 |
acctgttattgc |
35528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 64033 - 63850
Alignment:
| Q |
43 |
ctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
64033 |
ctgatgactcgcgcttactaggaattcctcattgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
63934 |
T |
|
| Q |
143 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
63933 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
63850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 42189 - 42264
Alignment:
| Q |
151 |
tatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
226 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42189 |
tatatactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgc |
42264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 212; Significance: 1e-116; HSPs: 2)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 45735 - 45946
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45735 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
45834 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45835 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
45934 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
45935 |
acctgttattgc |
45946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 62678 - 62720
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgct |
57 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
62678 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgct |
62720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0515 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0515
Description:
Target: scaffold0515; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 7821 - 7610
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
7821 |
caaagggcagggacgtggtcaacgtgagctgatgactcgcgcttactaggaattcctcgttgaagatcaacaattgcaatgatctatcaccatcatgatg |
7722 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7721 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagagcatcacag |
7622 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7621 |
acctgttattgc |
7610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0306 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0306
Description:
Target: scaffold0306; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 7831 - 7620
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
7831 |
caaagggcagggacgtggtcaacgtgagctgatgactcgcgcttactaggaattcctcgttgaagatcaacaattgcaatgatctatcaccatcatgatg |
7732 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7731 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagagcatcacag |
7632 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7631 |
acctgttattgc |
7620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 25442 - 25231
Alignment:
| Q |
15 |
caaagggcagggacgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatg |
114 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |
|
|
| T |
25442 |
caaagggcagggacgtagtcaacgtgagctgatgactcgcacttactaggaattcctcgttgaagatcaacaattgcaatgatctatcaccatcatgatg |
25343 |
T |
|
| Q |
115 |
aaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacag |
214 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
25342 |
aaatttcaaagattacccgggcctatcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatcgaagggcatcacag |
25243 |
T |
|
| Q |
215 |
acctgttattgc |
226 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25242 |
acctgttattgc |
25231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University