View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2701_low_43 (Length: 215)

Name: NF2701_low_43
Description: NF2701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2701_low_43
NF2701_low_43
[»] chr6 (34 HSPs)
chr6 (2-205)||(22605173-22605367)
chr6 (72-205)||(22604999-22605132)
chr6 (24-137)||(21118852-21118966)
chr6 (65-161)||(9362826-9362922)
chr6 (133-205)||(21130097-21130169)
chr6 (139-183)||(2377822-2377866)
chr6 (139-181)||(3058296-3058338)
chr6 (137-183)||(35210272-35210318)
chr6 (139-180)||(16107749-16107790)
chr6 (139-183)||(2378194-2378238)
chr6 (139-183)||(2578489-2578533)
chr6 (139-183)||(2579918-2579962)
chr6 (139-183)||(3409327-3409371)
chr6 (139-183)||(3415526-3415570)
chr6 (139-183)||(10074037-10074081)
chr6 (139-183)||(10074409-10074453)
chr6 (139-183)||(29518571-29518615)
chr6 (139-183)||(29518988-29519032)
chr6 (139-183)||(32741247-32741291)
chr6 (78-167)||(16738237-16738327)
chr6 (141-182)||(2843624-2843665)
chr6 (142-183)||(16454975-16455016)
chr6 (143-180)||(32460630-32460667)
chr6 (139-183)||(1846816-1846860)
chr6 (139-199)||(11637767-11637827)
chr6 (142-180)||(1127431-1127469)
chr6 (139-181)||(2578881-2578923)
chr6 (139-181)||(12092528-12092570)
chr6 (141-183)||(14748386-14748428)
chr6 (139-180)||(8481997-8482038)
chr6 (142-183)||(16454643-16454684)
chr6 (150-182)||(2579549-2579581)
chr6 (139-183)||(3409728-3409772)
chr6 (39-169)||(22612182-22612314)
[»] chr7 (39 HSPs)
chr7 (2-205)||(8802250-8802454)
chr7 (70-205)||(8802546-8802681)
chr7 (72-205)||(48071432-48071566)
chr7 (95-209)||(27391771-27391885)
chr7 (139-201)||(21416187-21416249)
chr7 (137-185)||(1085292-1085340)
chr7 (139-183)||(7517648-7517692)
chr7 (139-185)||(30253558-30253604)
chr7 (142-183)||(1085665-1085706)
chr7 (142-183)||(22566711-22566752)
chr7 (139-180)||(30244341-30244382)
chr7 (139-183)||(23423-23467)
chr7 (139-183)||(6054628-6054672)
chr7 (139-183)||(29157633-29157677)
chr7 (139-183)||(30245145-30245189)
chr7 (139-183)||(37533410-37533454)
chr7 (139-182)||(14681579-14681622)
chr7 (143-182)||(23569052-23569091)
chr7 (139-181)||(7554095-7554137)
chr7 (137-183)||(36939777-36939823)
chr7 (139-180)||(19122802-19122843)
chr7 (139-180)||(34218080-34218121)
chr7 (139-180)||(45754786-45754827)
chr7 (139-183)||(11845259-11845303)
chr7 (139-183)||(16569264-16569308)
chr7 (139-183)||(16596354-16596398)
chr7 (139-183)||(21619091-21619135)
chr7 (139-183)||(22567085-22567129)
chr7 (142-182)||(28300302-28300342)
chr7 (139-181)||(9901713-9901755)
chr7 (139-185)||(45433307-45433353)
chr7 (142-183)||(24177503-24177544)
chr7 (85-126)||(24903027-24903068)
chr7 (148-201)||(27598035-27598088)
chr7 (150-183)||(37533067-37533100)
chr7 (142-183)||(40094823-40094864)
chr7 (72-120)||(7631216-7631264)
chr7 (139-183)||(8128487-8128531)
chr7 (139-183)||(47129163-47129207)
[»] chr5 (38 HSPs)
chr5 (72-205)||(41341501-41341634)
chr5 (62-205)||(41340325-41340467)
chr5 (76-205)||(5963729-5963858)
chr5 (72-204)||(34103601-34103733)
chr5 (2-75)||(41341343-41341417)
chr5 (61-121)||(14169045-14169105)
chr5 (2-76)||(14168820-14168895)
chr5 (137-183)||(41170702-41170748)
chr5 (139-200)||(13042590-13042651)
chr5 (148-205)||(14168980-14169037)
chr5 (139-183)||(26074680-26074724)
chr5 (139-200)||(13112588-13112649)
chr5 (142-183)||(18603169-18603210)
chr5 (139-183)||(9498700-9498744)
chr5 (139-183)||(26074192-26074236)
chr5 (143-183)||(32487461-32487501)
chr5 (139-183)||(40296361-40296405)
chr5 (139-178)||(6500523-6500562)
chr5 (150-183)||(26075219-26075252)
chr5 (142-183)||(34753074-34753115)
chr5 (139-183)||(624264-624308)
chr5 (139-183)||(3295061-3295105)
chr5 (139-183)||(6500890-6500934)
chr5 (139-171)||(13042784-13042816)
chr5 (139-171)||(13112782-13112814)
chr5 (139-183)||(25328003-25328047)
chr5 (143-183)||(36521946-36521986)
chr5 (142-185)||(24489255-24489298)
chr5 (143-181)||(11417027-11417065)
chr5 (142-183)||(13415809-13415850)
chr5 (142-183)||(15370470-15370511)
chr5 (142-183)||(36568616-36568657)
chr5 (139-180)||(42405642-42405683)
chr5 (140-184)||(12662699-12662743)
chr5 (139-183)||(15370167-15370211)
chr5 (139-183)||(35150074-35150118)
chr5 (139-179)||(36522283-36522323)
chr5 (139-183)||(41632850-41632894)
[»] chr3 (49 HSPs)
chr3 (64-205)||(17731875-17732016)
chr3 (64-205)||(19033106-19033247)
chr3 (36-187)||(16869739-16869891)
chr3 (2-114)||(17732101-17732213)
chr3 (2-114)||(19033332-19033444)
chr3 (2-201)||(40196017-40196219)
chr3 (63-205)||(16870925-16871071)
chr3 (139-210)||(54017594-54017665)
chr3 (125-205)||(17735023-17735103)
chr3 (125-205)||(19036292-19036372)
chr3 (137-183)||(22303703-22303749)
chr3 (142-183)||(41359814-41359855)
chr3 (85-200)||(23161955-23162070)
chr3 (104-186)||(16868394-16868476)
chr3 (139-185)||(43346837-43346883)
chr3 (139-201)||(53596010-53596072)
chr3 (139-201)||(53596325-53596387)
chr3 (72-169)||(53981609-53981707)
chr3 (139-183)||(12114608-12114652)
chr3 (139-183)||(22304001-22304045)
chr3 (139-183)||(22304637-22304681)
chr3 (139-183)||(39389138-39389182)
chr3 (143-183)||(52634743-52634783)
chr3 (142-185)||(29644630-29644673)
chr3 (148-183)||(32589771-32589806)
chr3 (72-118)||(23162322-23162368)
chr3 (142-183)||(29644951-29644992)
chr3 (139-180)||(32462946-32462987)
chr3 (139-180)||(37990685-37990726)
chr3 (142-183)||(47964567-47964608)
chr3 (139-200)||(48127861-48127922)
chr3 (139-183)||(4823723-4823767)
chr3 (139-183)||(35946590-35946634)
chr3 (137-181)||(46546369-46546413)
chr3 (148-183)||(1634369-1634404)
chr3 (139-182)||(3135500-3135543)
chr3 (139-185)||(3135119-3135165)
chr3 (139-185)||(8327970-8328016)
chr3 (142-180)||(42342139-42342177)
chr3 (139-181)||(45395699-45395741)
chr3 (141-183)||(52635008-52635050)
chr3 (142-183)||(33803301-33803342)
chr3 (139-172)||(39336016-39336049)
chr3 (139-183)||(15772922-15772966)
chr3 (139-175)||(31190085-31190121)
chr3 (139-179)||(37991023-37991063)
chr3 (143-183)||(42342438-42342478)
chr3 (139-183)||(53596543-53596587)
chr3 (139-183)||(54018244-54018288)
[»] chr8 (34 HSPs)
chr8 (2-201)||(5981639-5981841)
chr8 (126-205)||(12156691-12156770)
chr8 (139-182)||(30441154-30441197)
chr8 (72-201)||(5981420-5981550)
chr8 (139-184)||(147887-147932)
chr8 (142-183)||(3038339-3038380)
chr8 (139-183)||(5915935-5915979)
chr8 (139-183)||(9483233-9483277)
chr8 (139-183)||(30359339-30359383)
chr8 (139-174)||(20995462-20995497)
chr8 (139-185)||(6651560-6651606)
chr8 (89-169)||(2954503-2954584)
chr8 (139-180)||(3669758-3669799)
chr8 (139-180)||(34834947-34834988)
chr8 (142-183)||(40518139-40518180)
chr8 (139-183)||(3670128-3670172)
chr8 (139-183)||(18371707-18371750)
chr8 (137-181)||(18372038-18372082)
chr8 (139-183)||(33113413-33113457)
chr8 (139-183)||(34835277-34835321)
chr8 (139-183)||(34835543-34835587)
chr8 (139-183)||(34835809-34835853)
chr8 (148-179)||(32640587-32640618)
chr8 (139-185)||(6731961-6732007)
chr8 (142-180)||(9507853-9507891)
chr8 (139-185)||(45122103-45122149)
chr8 (142-183)||(147519-147560)
chr8 (16-125)||(3671062-3671173)
chr8 (143-183)||(70324-70364)
chr8 (143-183)||(8918814-8918854)
chr8 (139-183)||(20870619-20870663)
chr8 (139-183)||(37544536-37544580)
chr8 (143-183)||(40518650-40518690)
chr8 (139-183)||(43274825-43274869)
[»] chr4 (47 HSPs)
chr4 (98-200)||(1868102-1868204)
chr4 (2-169)||(47680703-47680874)
chr4 (139-201)||(11197276-11197338)
chr4 (139-183)||(49302974-49303018)
chr4 (139-183)||(50630799-50630843)
chr4 (139-183)||(54936264-54936308)
chr4 (136-199)||(51681590-51681653)
chr4 (137-183)||(1731689-1731735)
chr4 (139-181)||(25483406-25483448)
chr4 (137-182)||(44620422-44620467)
chr4 (139-183)||(3340875-3340919)
chr4 (141-201)||(10396466-10396526)
chr4 (139-183)||(18932793-18932837)
chr4 (139-183)||(22028005-22028049)
chr4 (139-183)||(36629305-36629349)
chr4 (139-183)||(55933168-55933212)
chr4 (139-181)||(52884957-52885000)
chr4 (143-185)||(3271853-3271895)
chr4 (142-180)||(4955364-4955402)
chr4 (142-183)||(22183311-22183352)
chr4 (139-180)||(23817725-23817766)
chr4 (142-183)||(31691220-31691261)
chr4 (139-180)||(34646693-34646734)
chr4 (139-183)||(39404466-39404510)
chr4 (139-183)||(41370425-41370469)
chr4 (139-183)||(49880228-49880272)
chr4 (139-183)||(50002494-50002538)
chr4 (143-183)||(54017643-54017683)
chr4 (139-183)||(54108981-54109024)
chr4 (139-178)||(39792904-39792943)
chr4 (137-180)||(44621073-44621116)
chr4 (139-174)||(54343052-54343087)
chr4 (139-181)||(10245989-10246031)
chr4 (137-183)||(20825904-20825950)
chr4 (139-181)||(36608705-36608747)
chr4 (153-199)||(45484771-45484817)
chr4 (139-185)||(49076875-49076921)
chr4 (142-183)||(2741139-2741180)
chr4 (143-180)||(15841416-15841453)
chr4 (143-180)||(32941171-32941208)
chr4 (139-179)||(52884767-52884808)
chr4 (143-183)||(3244499-3244539)
chr4 (16-75)||(8445748-8445808)
chr4 (139-199)||(10396183-10396243)
chr4 (139-183)||(22028413-22028457)
chr4 (139-183)||(36572087-36572131)
chr4 (139-179)||(45496877-45496917)
[»] chr1 (27 HSPs)
chr1 (70-170)||(25293562-25293662)
chr1 (139-183)||(17294645-17294689)
chr1 (139-183)||(26661568-26661612)
chr1 (139-183)||(26661944-26661988)
chr1 (139-183)||(34364993-34365037)
chr1 (139-183)||(44290504-44290548)
chr1 (142-180)||(3875380-3875418)
chr1 (139-181)||(37556181-37556223)
chr1 (139-181)||(41759553-41759595)
chr1 (139-180)||(3550791-3550832)
chr1 (142-183)||(32168747-32168788)
chr1 (150-183)||(44290882-44290915)
chr1 (139-183)||(14318935-14318979)
chr1 (99-162)||(27686529-27686593)
chr1 (139-183)||(32594762-32594806)
chr1 (139-183)||(41157059-41157103)
chr1 (139-183)||(41157443-41157487)
chr1 (139-183)||(44043818-44043862)
chr1 (139-181)||(45494020-45494062)
chr1 (142-183)||(66136-66177)
chr1 (142-179)||(3537648-3537685)
chr1 (139-180)||(11977015-11977056)
chr1 (139-180)||(29798270-29798311)
chr1 (148-185)||(30630693-30630730)
chr1 (148-185)||(34649504-34649541)
chr1 (150-183)||(41142440-41142473)
chr1 (139-183)||(5320011-5320055)
[»] scaffold0014 (1 HSPs)
scaffold0014 (100-210)||(197770-197878)
[»] scaffold0702 (1 HSPs)
scaffold0702 (139-183)||(560-604)
[»] chr2 (37 HSPs)
chr2 (139-183)||(36178651-36178695)
chr2 (137-185)||(37895105-37895153)
chr2 (140-187)||(36178218-36178265)
chr2 (137-183)||(37106256-37106302)
chr2 (142-183)||(14745343-14745384)
chr2 (142-183)||(14745716-14745757)
chr2 (142-183)||(15880331-15880372)
chr2 (139-183)||(6421799-6421843)
chr2 (139-183)||(28254283-28254327)
chr2 (142-183)||(29874072-29874113)
chr2 (148-181)||(35580779-35580812)
chr2 (143-183)||(962666-962706)
chr2 (139-179)||(3672773-3672813)
chr2 (139-183)||(5542671-5542715)
chr2 (139-183)||(6422178-6422222)
chr2 (139-183)||(7598296-7598340)
chr2 (139-183)||(15511541-15511585)
chr2 (143-183)||(31468800-31468840)
chr2 (139-183)||(37105992-37106036)
chr2 (148-183)||(35580495-35580530)
chr2 (142-185)||(40679678-40679721)
chr2 (139-181)||(5543044-5543086)
chr2 (139-201)||(28226387-28226449)
chr2 (140-182)||(28531361-28531403)
chr2 (153-183)||(31385805-31385835)
chr2 (139-181)||(33731718-33731760)
chr2 (2-126)||(40053288-40053414)
chr2 (139-180)||(6421456-6421497)
chr2 (142-179)||(30323536-30323573)
chr2 (150-183)||(36005937-36005970)
chr2 (142-183)||(41283524-41283565)
chr2 (142-183)||(42514717-42514758)
chr2 (139-183)||(6421694-6421738)
chr2 (139-183)||(29676976-29677020)
chr2 (143-183)||(33561501-33561541)
chr2 (148-180)||(36178324-36178356)
chr2 (139-183)||(37632643-37632687)
[»] scaffold0391 (2 HSPs)
scaffold0391 (139-183)||(1737-1781)
scaffold0391 (139-180)||(1152-1193)
[»] scaffold0027 (1 HSPs)
scaffold0027 (139-181)||(47430-47472)
[»] scaffold0078 (2 HSPs)
scaffold0078 (139-183)||(5050-5094)
scaffold0078 (139-183)||(5425-5469)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 22605173 - 22605367
Alignment:
Q  2 atcactagcctgatcacactaggatcccgctcccgctccccactaagcctaaccacgactttgataccactgttggggagtccggggagccccgggagcg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||         |||||||||||||    
T  22605173 atcactagcctgatcacactaggatcccgctcccgctccccactgagcctaaccacggctttgataccattgttgggg---------agccccgggagcg 22605263  T
Q  102 gcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22605264 gcaatgggccaaacgtccaagaccataagagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggtttccactcttatatatcc 22605363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 22604999 - 22605132
Alignment:
Q  72 tgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaat 171  Q
    |||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||| ||| ||||||||| || ||||| |||||| ||||||  |||    
T  22604999 tgttggggagcccggggagccccagaagcggcaatgggccaaatgtccaagaccataagagagttaaacacctcactcttatccaaaagcttaagaaaat 22605098  T
Q  172 gggtttatgggttcccactcttatatatcctttg 205  Q
    |||||||||| ||||| |||||||||||||||||    
T  22605099 gggtttatggattccctctcttatatatcctttg 22605132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 21118852 - 21118966
Alignment:
Q  24 gatcccgctcccgctccccactaagcctaaccacgactttgataccactgttggggagtccggggagccc-cgggagcggcaatgggccaaacgtccaag 122  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||  |||||||||||||||||| ||||||| |    
T  21118852 gatcccgctcccgctccccactaagcctaaccacgactctgataccactgttggggacttcggggagccctggggagcggcaatgggccagacgtccagg 21118951  T
Q  123 accataacagactta 137  Q
    || |||| |||||||    
T  21118952 actataagagactta 21118966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 9362826 - 9362922
Alignment:
Q  65 ataccactgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaacc 161  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| | | ||||||||||||    
T  9362826 ataccaccgttggggagtccagggagccccgggagcggcaatgggacaaacgtccaggaccataagagacttaaacaccatactattacccaaaacc 9362922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 21130097 - 21130169
Alignment:
Q  133 acttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  21130097 acttaaacaccacactcttatccaaaaccttaaggcaatggatttatgggttccctctcttatatatcttttg 21130169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 2377866 - 2377822
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  2377866 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 2377822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 3058338 - 3058296
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  3058338 acaccacactcttacccaaaaccttaaggcaatgggtttatgg 3058296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 35210318 - 35210272
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  35210318 aaacaccacactcttacccaaaaccttaaggcaatggttttatgggt 35210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 16107790 - 16107749
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  16107790 acaccacactcttacccaaaaccttaaggcaatgggtttatg 16107749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 2378238 - 2378194
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  2378238 acaccacattcttacctaaaaccttaaggtaatgggtttatgggt 2378194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 2578489 - 2578533
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  2578489 acaccacactcttacccaaaaccttaaggctatgggtttatgggt 2578533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 2579918 - 2579962
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  2579918 acaccacattcttacccaaaaccttaaggctgtgggtttatgggt 2579962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 3409371 - 3409327
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  3409371 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 3409327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 3415570 - 3415526
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||    
T  3415570 acaccacactcttaccaaaaaccttaaggcaatgggtttatgggt 3415526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 10074037 - 10074081
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| | ||||||||||||||||||||||||||||||||||    
T  10074037 acaccacacttttacccaaaaccttaaggcaatgggtttatgggt 10074081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 10074409 - 10074453
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  10074409 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 10074453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 29518615 - 29518571
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||| |||||||||||||||    
T  29518615 acaccacactcttacccaaaaccttaaggtaatgggtttatgggt 29518571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 29519032 - 29518988
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||| |||||||||||||||    
T  29519032 acaccacactcttacccaaaaccttaaggtaatgggtttatgggt 29518988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 32741291 - 32741247
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||| |||||||||||||||    
T  32741291 acaccacactcttacccaaaaccttaaggtaatgggtttatgggt 32741247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 16738327 - 16738237
Alignment:
Q  78 ggagtccggggagccccgggagcggcaatgggccaaacgtccaagacca-taacagacttaaacaccacattcttacccaaaaccttaagg 167  Q
    ||||||||| |||| |||||||||||||||  | |||||||||||||||  || ||||||| | |||||||||  |||||||| |||||||    
T  16738327 ggagtccggagagcgccgggagcggcaatgaactaaacgtccaagaccaccaagagacttagaaaccacattcccacccaaaatcttaagg 16738237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 2843665 - 2843624
Alignment:
Q  141 accacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  2843665 accacactcttacccaaaaccttaaggcaatgagtttatggg 2843624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 16455016 - 16454975
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  16455016 ccacactcttacccaaaaccttaaggcaataggtttatgggt 16454975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 32460630 - 32460667
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||| |||||||||||||||||||||||||||||||||    
T  32460630 cacactcttacccaaaaccttaaggcaatgggtttatg 32460667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 1846860 - 1846816
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||    
T  1846860 acaccacactcttatccaaaaccttaaggcaatggatttatgggt 1846816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 11637767 - 11637827
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatat 199  Q
    |||||||| ||||| |||||| |||||| ||||||||||||||||  || |||||||||||    
T  11637767 acaccacactcttatccaaaatcttaagacaatgggtttatgggtatcctctcttatatat 11637827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 1127469 - 1127431
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  1127469 ccacactcttacccaaaaccttaaggtaatgggtttatg 1127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 2578881 - 2578923
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| |||||||||||||||||||| |||| ||||||||    
T  2578881 acaccacactcttacccaaaaccttaaggtaatgagtttatgg 2578923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 12092528 - 12092570
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| |||||| |||||||||||||||||| ||||||||    
T  12092528 acaccacagtcttactcaaaaccttaaggcaatgagtttatgg 12092570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 14748386 - 14748428
Alignment:
Q  141 accacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||| |||||||||||||||||| |||||| ||||||||||    
T  14748386 accacactcttacccaaaaccttaacgcaatgagtttatgggt 14748428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 8482038 - 8481997
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| |||||||||||| |||||||||||| |||||||    
T  8482038 acaccacactcttacccaaaatcttaaggcaatgagtttatg 8481997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 16454684 - 16454643
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||| |||||| |||||||||||||||||||||||    
T  16454684 ccacactcttatccaaaatcttaaggcaatgggtttatgggt 16454643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 2579549 - 2579581
Alignment:
Q  150 ttacccaaaaccttaaggcaatgggtttatggg 182  Q
    ||||||||||||||||||||||| |||||||||    
T  2579549 ttacccaaaaccttaaggcaatgagtttatggg 2579581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 3409772 - 3409728
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||  | ||||||||||||||||||||    
T  3409772 acaccacactcttacccaaaaaataaaggcaatgggtttatgggt 3409728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 22612182 - 22612314
Alignment:
Q  39 ccccactaagcctaaccacgactttgataccact-gttggggagtccggggagccccgggagcggcaatgggccaaacgtccaaga-ccataacagactt 136  Q
    ||||||| |||||||||| | || | |||||| | ||||| ||||  ||| ||| |||||| |  |||||||| |||||||||||| || ||| ||||||    
T  22612182 ccccactgagcctaaccagggctcttataccagttgttggcgagtatgggaagcgccgggatcaacaatgggctaaacgtccaagaaccctaagagactt 22612281  T
Q  137 aaacaccacattcttacccaaaaccttaaggca 169  Q
    | |||||||||    ||||||||||||||||||    
T  22612282 agacaccacatctacacccaaaaccttaaggca 22612314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 1e-64; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 8802454 - 8802250
Alignment:
Q  2 atcactagcctgatc-acactaggatcccgctcccgctccccactaagcctaaccacgactttgataccactgttggggagtccggggagccccgggagc 100  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| | || |||||||||||||||||||||||| ||| |||  ||||    
T  8802454 atcactagcctgatccatactaggatcccgctcccgctccccactgagcctaaccatggctctgataccactgttggggagtccggagagtcccaagagc 8802355  T
Q  101 ggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatc 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||| |||||| | ||| ||||| |||||||||||||| ||||||||||||    
T  8802354 ggcaatgggccaaacgtccaagaccataagagacttaaacaccacgctcttactcaaaacataaagacaatgagtttatgggttccctctcttatatatc 8802255  T
Q  201 ctttg 205  Q
    |||||    
T  8802254 ctttg 8802250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 205
Target Start/End: Complemental strand, 8802681 - 8802546
Alignment:
Q  70 actgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggca 169  Q
    |||||||||||||||| || |||||| ||||||||||||| |||| ||||| |||||||| |||||||||||||||| |||||||||||| |||||  ||    
T  8802681 actgttggggagtccgcggtgccccgcgagcggcaatgggtcaaatgtccatgaccataagagacttaaacaccacactcttacccaaaatcttaaaaca 8802582  T
Q  170 atgggtttatgggttcccactcttatatatcctttg 205  Q
     || |||||||||||||| |||||||||||||||||    
T  8802581 gtgagtttatgggttccccctcttatatatcctttg 8802546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 48071566 - 48071432
Alignment:
Q  72 tgttggggag-tccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaa 170  Q
    |||||||||| ||||| ||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| ||||||||||||| |||    
T  48071566 tgttggggaggtccggcgagtcccggaagcggcaatgggccaaacgtccaagatcataagagacttaaacatcacactcttatccaaaaccttaagacaa 48071467  T
Q  171 tgggtttatgggttcccactcttatatatcctttg 205  Q
    | |||||||| |||||| |||||||||||||||||    
T  48071466 taggtttatgagttccctctcttatatatcctttg 48071432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 27391771 - 27391885
Alignment:
Q  95 gggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactctta 194  Q
    ||||||||||||| ||||||||| |||||| |||| |||||||||||||||| ||||||| |||||||||||||| ||| |||||||||| |   |||||    
T  27391771 gggagcggcaatgagccaaacgttcaagactataagagacttaaacaccacactcttacctaaaaccttaaggcagtggatttatgggtttcatgtctta 27391870  T
Q  195 tatatcctttgcttc 209  Q
    |||||||||||||||    
T  27391871 tatatcctttgcttc 27391885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 21416187 - 21416249
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||||| |||||||||||||| |||||||||||||||||||||  || |||||||||||||    
T  21416187 acaccacactcttacccaaaaccctaaggcaatgggtttatgggtctcctctcttatatatcc 21416249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 1085292 - 1085340
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  1085292 aaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttc 1085340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 7517692 - 7517648
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  7517692 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 7517648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 30253604 - 30253558
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  30253604 acaccacactcttacccaaaaccttaaggcaatgagtttatgggttc 30253558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 1085665 - 1085706
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  1085665 ccacactcttacccaaaaccttaaggcaatgggtttatgggt 1085706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 22566711 - 22566752
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  22566711 ccacactcttacccaaaaccttaaggcaatgggtttatgggt 22566752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 30244382 - 30244341
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  30244382 acaccacactcttacccaaaaccttaaggcaatgggtttatg 30244341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 23423 - 23467
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  23423 acaccacactcttacccaaaaccttaaggcaataggtttatgggt 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 6054672 - 6054628
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  6054672 acaccacactcttacccaaaaccttaaggcaatgtgtttatgggt 6054628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 29157677 - 29157633
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  29157677 acaccacactcttacccaaaaccttaaggcaatggatttatgggt 29157633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 30245189 - 30245145
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  30245189 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 30245145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 37533410 - 37533454
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  37533410 acaccacactcttacccaaaaccttaaggcaatggatttatgggt 37533454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 14681622 - 14681579
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  14681622 acaccacactcttacccaaaaccttaagacaatgggtttatggg 14681579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 23569052 - 23569091
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  23569052 cacactcttacccaaaaccttaaggcaatgggtttatggg 23569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 7554137 - 7554095
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||||||||||||||||||| ||||||||||||    
T  7554137 acaccacactcttacccaaaaccttaaggctatgggtttatgg 7554095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 36939777 - 36939823
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||    
T  36939777 aaacaccacacttttacccaaaaccttaaggcaatggatttatgggt 36939823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 19122843 - 19122802
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  19122843 acaccacactcttacccaaaaccttaaggcaatggatttatg 19122802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 34218080 - 34218121
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  34218080 acaccacactcttacccaaaaccttaagacaatgggtttatg 34218121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 45754827 - 45754786
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  45754827 acaccacactcttacccaaaaccttaaggctatgggtttatg 45754786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 11845303 - 11845259
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||    
T  11845303 acaccacactcttatccaaaaccttaaggcaatggatttatgggt 11845259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 16569308 - 16569264
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||    
T  16569308 acaccgcactcttaccaaaaaccttaaggcaatgggtttatgggt 16569264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 16596354 - 16596398
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||    
T  16596354 acaccgcactcttaccaaaaaccttaaggcaatgggtttatgggt 16596398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 21619091 - 21619135
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||    
T  21619091 acaccacacttttacccaaaaccttaagacaatgggtttatgggt 21619135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 22567085 - 22567129
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||    
T  22567085 acaccacactcttaccaaaaaccttaaggcaatgagtttatgggt 22567129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 28300302 - 28300342
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  28300302 ccacactcttacccaaaatcttaaggcaatgggtttatggg 28300342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 9901755 - 9901713
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||    
T  9901755 acaccacactcttacccaaaaccttaagacaatgagtttatgg 9901713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 45433353 - 45433307
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| |||||||||||| ||||||||||| |||||||| ||||    
T  45433353 acaccacactcttacccaaaatcttaaggcaataggtttatgagttc 45433307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 24177544 - 24177503
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||    
T  24177544 ccacactcttaccaaaaactttaaggcaatgggtttatgggt 24177503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 24903068 - 24903027
Alignment:
Q  85 ggggagccccgggagcggcaatgggccaaacgtccaagacca 126  Q
    ||||||| ||||||||||||||| || |||||||||||||||    
T  24903068 ggggagctccgggagcggcaatgcgctaaacgtccaagacca 24903027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 27598088 - 27598035
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||| ||||||| |||| ||||||||||||||||  || |||||||||||||    
T  27598088 tcttacgcaaaaccctaagacaatgggtttatgggtctcctctcttatatatcc 27598035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 37533067 - 37533100
Alignment:
Q  150 ttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||| ||||||||||    
T  37533067 ttacccaaaaccttaaggcaatgagtttatgggt 37533100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 40094823 - 40094864
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||| | ||||||||||||||    
T  40094823 ccacactcttacccaaaaccttaagacgatgggtttatgggt 40094864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 7631216 - 7631264
Alignment:
Q  72 tgttggggagtccggggagccccgggagcggcaatgggccaaacgtcca 120  Q
    ||||||||||||| | ||||  |||||||||||||| ||||||||||||    
T  7631216 tgttggggagtccagagagcgtcgggagcggcaatgtgccaaacgtcca 7631264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 8128487 - 8128531
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| ||||||||||||||  ||||||||||||||    
T  8128487 acaccacactcttaaccaaaaccttaaggttatgggtttatgggt 8128531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 47129207 - 47129163
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| || ||||||||||||||| || ||||||||||||||    
T  47129207 acaccacactcctacccaaaaccttaaagcgatgggtttatgggt 47129163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 41341634 - 41341501
Alignment:
Q  72 tgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaat 171  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  41341634 tgttggggagtacggggagccccaggagcggcaatgggccaaacgtccaggactataagagacttaaacaccacattcttaccaaaaaccttaaggcaat 41341535  T
Q  172 gggtttatgggttcccactcttatatatcctttg 205  Q
    | || ||||||||||| |||||||||||||||||    
T  41341534 gagtgtatgggttccctctcttatatatcctttg 41341501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 41340467 - 41340325
Alignment:
Q  62 ttgataccactgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaacc 161  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| |||||| |    
T  41340467 ttgataccactgttggggagtccggggagcctcgggagcggcaatgggc-aaacgtccaagaccataagagacttaaacaccacactcttatccaaaatc 41340369  T
Q  162 ttaaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    ||||||||||| || |||| |||||| |||||||||||| ||||    
T  41340368 ttaaggcaatgagtgtatgagttccctctcttatatatcttttg 41340325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 5963858 - 5963729
Alignment:
Q  76 ggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggt 175  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||   | |    
T  5963858 ggggagtccggggagccccgggagcggcaatgggtcaaacgtccaggaccataagagacttaaacaccacactcttacccaaaaccttaaggcatcagat 5963759  T
Q  176 ttatgggttcccactcttatatatcctttg 205  Q
     ||||||||||| |||||||||||||||||    
T  5963758 ctatgggttccctctcttatatatcctttg 5963729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 34103733 - 34103601
Alignment:
Q  72 tgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaat 171  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| | | |||||| ||| |||||||||||| |||||  |||||||||||||||||    
T  34103733 tgttggggagtccggagagccccgggagcggcaatgggtcaaacgtctaggtccataagagatttaaacaccacactcttattcaaaaccttaaggcaat 34103634  T
Q  172 gggtttatgggttcccactcttatatatccttt 204  Q
    | ||||||| |||| | ||||||||||||||||    
T  34103633 gagtttatgagttctctctcttatatatccttt 34103601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 41341417 - 41341343
Alignment:
Q  2 atcactagcctgatc-acactaggatcccgctcccgctccccactaagcctaaccacgactttgataccactgtt 75  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| || | |||||||||||    
T  41341417 atcactagcctgatccacactaggatcccgctctcgctccccactgagcctaaccacggctctaataccactgtt 41341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 14169105 - 14169045
Alignment:
Q  61 tttgataccactgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaa 121  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||    
T  14169105 tttgataccactgttggggaatccggggagccccaggagcggcaatgggacaaacttccaa 14169045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 14168895 - 14168820
Alignment:
Q  2 atcactagcctgatc-acactaggatcccgctcccgctccccactaagcctaaccacgactttgataccactgttg 76  Q
    ||||||||| ||||| ||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||||||    
T  14168895 atcactagcatgatccacactagaatcctgttcccgctccccactaagcctaaccacggctctgataccactgttg 14168820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 41170748 - 41170702
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  41170748 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgggt 41170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 13042651 - 13042590
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatc 200  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||  || ||||||||||||    
T  13042651 acaccacactcttatccaaaaccttaaggcaatgggtttatgggtctcctctcttatatatc 13042590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 14169037 - 14168980
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    ||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  14169037 tcttacccaaaactttaaggcaatgagcttatgggttccctctcttatatatcctttg 14168980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 26074724 - 26074680
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  26074724 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 26074680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 13112649 - 13112588
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatc 200  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||  || ||||||||||||    
T  13112649 acaccacactcttatccaaaaccttaagacaatgggtttatgggtctcctctcttatatatc 13112588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 18603169 - 18603210
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  18603169 ccacactcttacccaaaaccttaaggcaatgggtttatgggt 18603210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 9498700 - 9498744
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  9498700 acaccacactcttacccaaaatcttaaggcaatgggtttatgggt 9498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 26074192 - 26074236
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||    
T  26074192 acaccacactcttacccaaaaccttaaggcaatgggttcatgggt 26074236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 32487501 - 32487461
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  32487501 cacactcttacccaaaaccttaaggcaatgggtttatgggt 32487461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 40296361 - 40296405
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  40296361 acaccacactcttacccaaaacctcaaggcaatgggtttatgggt 40296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 6500562 - 6500523
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggttta 178  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6500562 acaccacactcttacccaaaaccttaaggcaatgggttta 6500523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 26075219 - 26075252
Alignment:
Q  150 ttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||||||||||||||    
T  26075219 ttacccaaaaccttaaggcaatgggtttatgggt 26075252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 34753074 - 34753115
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  34753074 ccacactcttacccaaaaccttaaggcaatcggtttatgggt 34753115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 624308 - 624264
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||    
T  624308 acaccacactcttacccaaaacctcaaggctatgggtttatgggt 624264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 3295061 - 3295105
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| || |||||||||||| ||||||||||||||||||||    
T  3295061 acaccacactcatacccaaaacctcaaggcaatgggtttatgggt 3295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 6500934 - 6500890
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||    
T  6500934 acaccacactcttatccaaaaccttaaggcaatgagtttatgggt 6500890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 13042816 - 13042784
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaat 171  Q
    |||||||||||||||||||||||||||||||||    
T  13042816 acaccacattcttacccaaaaccttaaggcaat 13042784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 13112814 - 13112782
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaat 171  Q
    |||||||||||||||||||||||||||||||||    
T  13112814 acaccacattcttacccaaaaccttaaggcaat 13112782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 25328047 - 25328003
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||| | |||||||||||    
T  25328047 acaccacactcttacccaaaaccttaaggcattaggtttatgggt 25328003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 36521946 - 36521986
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  36521946 cacactcttacccaaaaccttaaggcaattggtttatgggt 36521986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 24489255 - 24489298
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||    
T  24489255 ccacactcttacgcaaaatcttaaggcaatgggtttatgggttc 24489298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 11417027 - 11417065
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  11417027 cacactcttacacaaaaccttaaggcaatgggtttatgg 11417065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 13415809 - 13415850
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||||||||||||||||| ||| |||||||||||    
T  13415809 ccacactcttacccaaaaccttaaggtaataggtttatgggt 13415850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 15370511 - 15370470
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||| |||||||||||||| ||||||||||||||    
T  15370511 ccacactcttacgcaaaaccttaaggctatgggtttatgggt 15370470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 36568616 - 36568657
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||    
T  36568616 ccacactcttaccaaaaaccttaaggcaatgggtttacgggt 36568657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 42405642 - 42405683
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| |||||||||||||||||||||| | ||||||||    
T  42405642 acaccacactcttacccaaaaccttaaggcattaggtttatg 42405683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 12662699 - 12662743
Alignment:
Q  140 caccacattcttacccaaaaccttaaggcaatgggtttatgggtt 184  Q
    ||||||| |||||||||||| |||||| |||||| ||||||||||    
T  12662699 caccacactcttacccaaaaacttaagacaatggatttatgggtt 12662743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 15370211 - 15370167
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||  ||| |||||||||    
T  15370211 acaccacactcttacccaaaaccttaaggctgtggatttatgggt 15370167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 35150118 - 35150074
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| | ||||||||||||||||| |||||| |||||||||    
T  35150118 acaccacacttttacccaaaaccttaagacaatggatttatgggt 35150074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 36522283 - 36522323
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttat 179  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  36522283 acaccacactcttacccaaaaccttaagataatgggtttat 36522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 41632894 - 41632850
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||| ||||| ||| |||||||||||||    
T  41632894 acaccacactcttacccaaaatcttaaagcattgggtttatgggt 41632850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 17731875 - 17732016
Alignment:
Q  64 gataccactgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaacctt 163  Q
    ||||||||||||| | |||  ||||||||| ||||||||||||||| |||||||  ||||||||||  ||||| ||||||||| |||||| |||||||||    
T  17731875 gataccactgttgtgaagtttggggagccctgggagcggcaatgggtcaaacgtttaagaccataagtgacttgaacaccacactcttactcaaaacctt 17731974  T
Q  164 aaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  17731975 aaggcaatgggtttatgggttccctttcttatatatcctttg 17732016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 19033106 - 19033247
Alignment:
Q  64 gataccactgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaacctt 163  Q
    ||||||||||||| | |||  ||||||||| ||||||||||||||| |||||||  ||||||||||  ||||| ||||||||| |||||| |||||||||    
T  19033106 gataccactgttgtgaagtttggggagccctgggagcggcaatgggtcaaacgtttaagaccataagtgacttgaacaccacactcttactcaaaacctt 19033205  T
Q  164 aaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  19033206 aaggcaatgggtttatgggttccctttcttatatatcctttg 19033247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 187
Target Start/End: Original strand, 16869739 - 16869891
Alignment:
Q  36 gctccccactaagcctaaccacgactttgataccactgttggg-gagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagac 134  Q
    |||||||||  |||||||||||||||||||||||||| || || ||||||||||||| | ||||||||||||| || |||  |||| |||| ||| ||||    
T  16869739 gctccccaccgagcctaaccacgactttgataccactttttggagagtccggggagcgctgggagcggcaatgtgctaaatatccacgaccttaagagac 16869838  T
Q  135 ttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttccc 187  Q
    |||||||||||| |||| | |||||||||||||||||| ||||||| ||||||    
T  16869839 ttaaacaccacactcttgctcaaaaccttaaggcaatgagtttatgtgttccc 16869891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 17732101 - 17732213
Alignment:
Q  2 atcactagcctgatcacactaggatcccgctcccgctccccactaagcctaaccacgactttgataccactgttggggagtccggggagccccgggagcg 101  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||||  |||| |    
T  17732101 atcactagcctgatccaactaggatcccgctcccgctccccactgagcctaaccacggctctgataccactgttggggagtttggggagccctaggagtg 17732200  T
Q  102 gcaatgggccaaa 114  Q
    |||||||||||||    
T  17732201 gcaatgggccaaa 17732213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 19033332 - 19033444
Alignment:
Q  2 atcactagcctgatcacactaggatcccgctcccgctccccactaagcctaaccacgactttgataccactgttggggagtccggggagccccgggagcg 101  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||  |||||||||  |||| |    
T  19033332 atcactagcctgatccaactaggatcccgctcccgctccccactgagcctaaccacggctctgataccactgttggggagtttggggagccctaggagtg 19033431  T
Q  102 gcaatgggccaaa 114  Q
    |||||||||||||    
T  19033432 gcaatgggccaaa 19033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 40196017 - 40196219
Alignment:
Q  2 atcactagcctgatc-acactaggatcccgctcccgct-ccccactaagcctaaccacgactttgataccact-gttggggagtccggggagccccggga 98  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||   || |||||||| | ||||||||| ||||||||||||  ||    
T  40196017 atcactagcctgatccacactaggatcccgctcccgctaccccaccaagcctaaccagagctctgataccagttgttggggagaccggggagccccaaga 40196116  T
Q  99 gcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatata 198  Q
    ||||||||||||||||| || |||||||||| ||||||| || ||| ||    |||||||||||||||||    ||| ||||||| ||| |||||| |||    
T  40196117 gcggcaatgggccaaacatctaagaccataagagacttagactccatatctccacccaaaaccttaaggcgtcaggtatatgggtcccctctcttacata 40196216  T
Q  199 tcc 201  Q
    |||    
T  40196217 tcc 40196219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 16870925 - 16871071
Alignment:
Q  63 tgataccactgttggggagtccggggagccccgggagcggcaatgggccaaacgtcc----aagaccataacagacttaaacaccacattcttacccaaa 158  Q
    ||||||||||||| || | || ||||| ||||| ||| |||||||||||||| || |    | |||||||| |||||||||||| ||| ||||||| |||    
T  16870925 tgataccactgttaggtattcaggggaaccccgtgaggggcaatgggccaaatgttctttcaggaccataagagacttaaacacgacactcttacctaaa 16871024  T
Q  159 accttaaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||||    
T  16871025 accttaaggcaatgagtttatgggttccctctcttatatattctttg 16871071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 54017594 - 54017665
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcctttgcttct 210  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  54017594 acaccacactcttacccaaaaccttaaggcaatgggtttatggattccctctcttatatatcctttgtttct 54017665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 17735023 - 17735103
Alignment:
Q  125 cataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    ||||| ||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||||    
T  17735023 cataagagacttaaacaccgcactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttatatatcttttg 17735103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 19036292 - 19036372
Alignment:
Q  125 cataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    ||||| ||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||||    
T  19036292 cataagagacttaaacaccgcactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttatatatcttttg 19036372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 22303703 - 22303749
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  22303703 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgggt 22303749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 41359814 - 41359855
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41359814 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 41359855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 23162070 - 23161955
Alignment:
Q  85 ggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggtt 184  Q
    |||||| || ||||||| |||||||||||||||||| |||||||| | | |||||||||||||    |||||||| |||||||||  |||| |||| ||     
T  23162070 ggggagtccggggagcgacaatgggccaaacgtccaggaccataagaaaattaaacaccacatctccacccaaaatcttaaggcatcgggtatatgagtc 23161971  T
Q  185 cccactcttatatatc 200  Q
     || ||||||||||||    
T  23161970 acctctcttatatatc 23161955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 16868394 - 16868476
Alignment:
Q  104 aatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcc 186  Q
    |||||||||||||| ||  || |||| ||||||||||| |||| ||||| |||||| |||||||||||| |||||||| ||||    
T  16868394 aatgggccaaacgttcagaactataagagacttaaacatcacactcttatccaaaatcttaaggcaatgagtttatggattcc 16868476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 43346837 - 43346883
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  43346837 acaccacactcttacccaaaaccttaaggcaatgagtttatgggttc 43346883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 53596072 - 53596010
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||||| |||||||||||||||||||| || ||||||||||||  || |||||||||||||    
T  53596072 acaccacactcttacccaaaaccttaaggtaacgggtttatgggtctcctctcttatatatcc 53596010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 53596387 - 53596325
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||||| |||||||||||||||||||| || ||||||||||||  || |||||||||||||    
T  53596387 acaccacactcttacccaaaaccttaaggtaacgggtttatgggtctcctctcttatatatcc 53596325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 53981707 - 53981609
Alignment:
Q  72 tgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagacca-taacagacttaaacaccacattcttacccaaaaccttaaggca 169  Q
    |||||||||||||||||| | |||||| |||||||  || ||||||||||||||| ||| ||||||| |||||||||    ||||||||||||| ||||    
T  53981707 tgttggggagtccggggaacgccgggaacggcaattagctaaacgtccaagaccactaaaagacttagacaccacatctccacccaaaaccttatggca 53981609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 12114608 - 12114652
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  12114608 acaccacactcttacccaaaaccttaagacaatgggtttatgggt 12114652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 22304001 - 22304045
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||    
T  22304001 acaccacactcttatccaaaaccttaaggcaatgggtttatgggt 22304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 22304681 - 22304637
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  22304681 acaccacactcttacccaaaaccttaaggcaatgtgtttatgggt 22304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 39389182 - 39389138
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  39389182 acaccacactcttacccaaaaccttaagacaatgggtttatgggt 39389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 52634783 - 52634743
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  52634783 cacactcttacccaaaaccttaaggcaatgggtttatgggt 52634743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 29644630 - 29644673
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  29644630 ccacactcttacccaaaaccttaagacaatgggtttatgggttc 29644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 32589806 - 32589771
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  32589806 tcttacccaaaaccttaaggcaatgggtttatgggt 32589771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 23162322 - 23162368
Alignment:
Q  72 tgttggggagtccggggagccccgggagcggcaatgggccaaacgtc 118  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||    
T  23162322 tgttggggagtccggggagctccgggagcggcaatggactaaacgtc 23162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 29644951 - 29644992
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  29644951 ccacactcttacccaaaaccttaagacaatgggtttatgggt 29644992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 32462946 - 32462987
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  32462946 acaccacactcttactcaaaaccttaaggcaatgggtttatg 32462987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 37990685 - 37990726
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  37990685 acaccacactcttacccaaaaccttaaggcaatgagtttatg 37990726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 47964567 - 47964608
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  47964567 ccacactcttacccaaaaccttaaggcaataggtttatgggt 47964608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 48127861 - 48127922
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatc 200  Q
    |||||||| ||||| ||||||| |||| |||||||||||||||||  || ||||||||||||    
T  48127861 acaccacactcttatccaaaacattaaagcaatgggtttatgggtctcctctcttatatatc 48127922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 4823767 - 4823723
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||    
T  4823767 acaccacactcttacccaaaatcttaaggcaatgagtttatgggt 4823723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 35946634 - 35946590
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||    
T  35946634 acaccacacttttacccaaaaccttaaggcaacgggtttatgggt 35946590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 46546369 - 46546413
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||    
T  46546369 aaacatcacactcttacacaaaaccttaaggcaatgggtttatgg 46546413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 1634369 - 1634404
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1634369 tcttacccaaaaccttaagccaatgggtttatgggt 1634404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 3135500 - 3135543
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    |||||||| ||||| | |||||||||||||||||||||||||||    
T  3135500 acaccacactcttatctaaaaccttaaggcaatgggtttatggg 3135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 3135119 - 3135165
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| |||||| |||||||||| |||| |||||||||||||||    
T  3135119 acaccacactcttactcaaaaccttatggcagtgggtttatgggttc 3135165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 8328016 - 8327970
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| |||||||||||||||||||||| |  ||||||||||||    
T  8328016 acaccacactcttacccaaaaccttaaggcattacgtttatgggttc 8327970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 42342139 - 42342177
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  42342139 ccacactcttacccaaaaccttaaggcaatgagtttatg 42342177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 45395699 - 45395741
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||    
T  45395699 acaccacactcttacccaaaacattaagacaatgggtttatgg 45395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 52635050 - 52635008
Alignment:
Q  141 accacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||| |||||||||||| |||||||||||| ||||||||||    
T  52635050 accacactcttacccaaaatcttaaggcaatgagtttatgggt 52635008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 33803301 - 33803342
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  33803301 ccacactcttacccaataccttaatgcaatgggtttatgggt 33803342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 39336016 - 39336049
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatg 172  Q
    |||||||| |||||||||||||||||||||||||    
T  39336016 acaccacactcttacccaaaaccttaaggcaatg 39336049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 15772966 - 15772922
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| |||||||||||| |||||| ||||||||||    
T  15772966 acaccacactcttatccaaaaccttaaagcaatgagtttatgggt 15772922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 31190121 - 31190085
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggt 175  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  31190121 acaccacactcttacccaaaaccttaaggctatgggt 31190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 37991023 - 37991063
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttat 179  Q
    |||||||| ||||||||||||||||||||| ||| ||||||    
T  37991023 acaccacactcttacccaaaaccttaaggcgatgagtttat 37991063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 42342438 - 42342478
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  42342438 cacactcttacccaaaaccttaagacaatggatttatgggt 42342478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 53596587 - 53596543
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||| |||| |||||| ||||||||||||||||    
T  53596587 acaccacactcttacctaaaatcttaagtcaatgggtttatgggt 53596543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 54018244 - 54018288
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||  | |||||||||||    
T  54018244 acaccacactcttacccaaaaccttaaggcgttaggtttatgggt 54018288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 5981639 - 5981841
Alignment:
Q  2 atcactagcctgatc-acactaggatcccgctcccgctccccactaagcctaaccacgactttgataccact--gttggggagtccggggagccccggga 98  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||  |||||||||| |  | |||||||| |   | ||||||||||||||||  || ||    
T  5981639 atcactagcctgatccacactaggatcccgctcccactccccaccgagcctaaccagggttctgataccatttcttgggggagtccggggagcgtcgaga 5981738  T
Q  99 gcggcaatgggccaaacgtccaagacca-taacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatat 197  Q
    |||||||||||| |||| || | ||||| ||| ||||||| |||||||||    |||||||||||||||||||| ||||||||||| ||| |||||||||    
T  5981739 gcggcaatgggctaaacttcaaggaccagtaagagacttagacaccacatctccacccaaaaccttaaggcaat-ggtttatgggtcccctctcttatat 5981837  T
Q  198 atcc 201  Q
    ||||    
T  5981838 atcc 5981841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 12156691 - 12156770
Alignment:
Q  126 ataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcctttg 205  Q
    |||| ||||||||||| |||| ||||||||||||||||||| ||||||||||||| ||||   |||||||||||| ||||    
T  12156691 ataagagacttaaacatcacactcttacccaaaaccttaagacaatgggtttatgagttctttctcttatatatcttttg 12156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 30441197 - 30441154
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  30441197 acaccacactcttacccaaaaccttaaggcaatgggtttatggg 30441154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 5981420 - 5981550
Alignment:
Q  72 tgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagacca-taacagacttaaacaccacattcttacccaaaaccttaaggcaa 170  Q
    ||||||||| ||| |||||| || |||| | |||||||| |||||||||  |||| ||| ||||||| ||||||||||   ||||||||||||||||||     
T  5981420 tgttggggactccagggagcgcctggagtgacaatgggctaaacgtccagaaccaataagagacttagacaccacatttccacccaaaaccttaaggcat 5981519  T
Q  171 tgggtttatgggttcccactcttatatatcc 201  Q
      |||  |||||| ||| |||||||||||||    
T  5981520 caggtacatgggtcccctctcttatatatcc 5981550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 147932 - 147887
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggtt 184  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||    
T  147932 acaccacactcttacccaaaaccttaaggcaataggtttatgggtt 147887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 3038339 - 3038380
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  3038339 ccacactcttacccaaaaccttaaggcaatgggtttatgggt 3038380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 5915979 - 5915935
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  5915979 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 5915935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 9483233 - 9483277
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  9483233 acaccacactcttacccaaaaccttaagacaatgggtttatgggt 9483277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 30359383 - 30359339
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  30359383 acaccacactcttacccaaaaccttaaggctatgggtttatgggt 30359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 20995462 - 20995497
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatggg 174  Q
    ||||||||||||||||||||||||||||||||||||    
T  20995462 acaccacattcttacccaaaaccttaaggcaatggg 20995497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 6651606 - 6651560
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||    
T  6651606 acaccacactcttacccaaaaccttaaggcaatgaatttatgggttc 6651560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 2954503 - 2954584
Alignment:
Q  89 agccccgggagcggcaatgggccaaacgtccaagacc-ataacagacttaaacaccacattcttacccaaaaccttaaggca 169  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||| || ||||||    ||| ||||||||||||||    
T  2954503 agccccgggagcggcaatgggtcaaacgtccaggaccaataagagacttagacgccacatctccaccgaaaaccttaaggca 2954584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 3669799 - 3669758
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  3669799 acaccacactcttacccaaaaccttaaggcaatgagtttatg 3669758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 34834988 - 34834947
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  34834988 acaccacactcttacccaaaaccttaaggcaatgagtttatg 34834947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 40518180 - 40518139
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  40518180 ccacactcttacccaaaaccttaaggcattgggtttatgggt 40518139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 3670172 - 3670128
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||    
T  3670172 acaccacactcttacccaaaaccttaaggaaataggtttatgggt 3670128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 18371707 - 18371750
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  18371707 acaccacactcttacccaaaaccttaaggc-atgggtttatgggt 18371750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 18372038 - 18372082
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||    
T  18372038 aaacaccacactcttacccaaaaccttaaagcaatgagtttatgg 18372082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 33113413 - 33113457
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||    
T  33113413 acaccacactcttacccaaaatcttaaggcaatgagtttatgggt 33113457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 34835321 - 34835277
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  34835321 acaccacactcttacccaaaactttaaggcaatgagtttatgggt 34835277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 34835587 - 34835543
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  34835587 acaccacactcttacccaaaactttaaggcaatgagtttatgggt 34835543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 34835853 - 34835809
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  34835853 acaccacactcttacccaaaactttaaggcaatgagtttatgggt 34835809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Original strand, 32640587 - 32640618
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttat 179  Q
    ||||||||||||||||||||||||||||||||    
T  32640587 tcttacccaaaaccttaaggcaatgggtttat 32640618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 6732007 - 6731961
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| |||||| ||||||||||||||||||  |||||||||||    
T  6732007 acaccacactcttactcaaaaccttaaggcaatgaatttatgggttc 6731961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 9507891 - 9507853
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  9507891 ccacactcttacccaaaaccttaaggtaatgggtttatg 9507853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 45122103 - 45122149
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| |||||||||||||||||||  |||| ||||||||||||    
T  45122103 acaccacactcttacccaaaaccttaagaaaatgagtttatgggttc 45122149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 147560 - 147519
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||| |||||||||| |||||||||||    
T  147560 ccacactcttacccaaaactttaaggcaataggtttatgggt 147519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 3671062 - 3671173
Alignment:
Q  16 cacactaggatcccgctcccgct-ccccactaagcctaaccacgactttgatacca--ctgttggggagtccggggagccccgggagcggcaatgggcca 112  Q
    |||||||||||||||||||| || |||||  ||||||| ||| |||| ||||||||   |||||||||||| ||||| | || |||||||||||| || |    
T  3671062 cacactaggatcccgctcccactcccccagcaagcctagcca-gactctgataccaatttgttggggagtctggggaacgcctggagcggcaatgagcga 3671160  T
Q  113 aacgtccaagacc 125  Q
    || ||| ||||||    
T  3671161 aatgtctaagacc 3671173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 70324 - 70364
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||| |||||||||||||| |||||||||||||    
T  70324 cacactcttacctaaaaccttaaggcagtgggtttatgggt 70364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 8918814 - 8918854
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||| |||| |||||||||||    
T  8918814 cacactcttacccaaaaccttaagtcaataggtttatgggt 8918854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 20870619 - 20870663
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||    
T  20870619 acaccacactcttatccaaaatcttaaggcagtgggtttatgggt 20870663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 37544536 - 37544580
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||| | ||||| |||||||||    
T  37544536 acaccacactcttacccaaaaccttaaagtaatggatttatgggt 37544580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 40518690 - 40518650
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||| || |||||||||||||    
T  40518690 cacactcttacccaaaaccttaagtcattgggtttatgggt 40518650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 43274825 - 43274869
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||| |||||||||||| |||| |||||||||||    
T  43274825 acaccacactcttactcaaaaccttaagacaataggtttatgggt 43274869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 1868204 - 1868102
Alignment:
Q  98 agcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatat 197  Q
    ||||||||||||||||||||||| || ||||| |||||||| ||  ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  1868204 agcggcaatgggccaaacgtccaggatcataagagacttaatcataacactcttacccaaaactttaaggcaatgggtttatgggttccctctcttatat 1868105  T
Q  198 atc 200  Q
    |||    
T  1868104 atc 1868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 47680874 - 47680703
Alignment:
Q  2 atcactagcctgatca-cactaggatcccgctcccgct-ccccactaagcctaaccacgactttgatacca-ctgttggggagtccggggagccccggga 98  Q
    |||||||||||||||  |||||||||||| |||||||| ||||||| |||||||||| | || ||||||||  |||||||| ||| | |||||  |||||    
T  47680874 atcactagcctgatcctcactaggatcccactcccgctcccccactgagcctaaccagggctctgataccagttgttggggtgtctgaggagcatcggga 47680775  T
Q  99 gcggcaatgggccaaacgtccaagacc-ataacagacttaaacaccacattcttacccaaaaccttaaggca 169  Q
    ||| ||||| |  ||||||||| |||| |||| ||||||| |||||||||    ||||||||||||||||||    
T  47680774 gcgacaatgagttaaacgtccaggaccaataagagacttagacaccacatctccacccaaaaccttaaggca 47680703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 11197338 - 11197276
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||||| |||||||||||||| |||||||||||||||||||||  || |||||||||||||    
T  11197338 acaccacactcttacccaaaaccctaaggcaatgggtttatgggtctcctctcttatatatcc 11197276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 49303018 - 49302974
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  49303018 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 49302974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 50630799 - 50630843
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  50630799 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 50630843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 54936308 - 54936264
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  54936308 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 54936264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 51681653 - 51681590
Alignment:
Q  136 taaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatat 199  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||| || ||| |||||||||||    
T  51681653 taaacaccacactcttacccaaaatcttaaggcaatgggtatatgagtcccctctcttatatat 51681590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 1731689 - 1731735
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||    
T  1731689 aaacaccacactcttacccaaaaccttaaggcaattggtttatgggt 1731735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 25483448 - 25483406
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  25483448 acaccacactcttacccaaaaccttaaggcaatgggtttatgg 25483406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 44620467 - 44620422
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||    
T  44620467 aaacatcacactcttacccaaaaccttaaggcaatgggtttatggg 44620422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 3340919 - 3340875
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  3340919 acaccacactcttacccaaaaccttaaggcagtgggtttatgggt 3340875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 10396526 - 10396466
Alignment:
Q  141 accacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||| ||||| |||||||| |||||||||||||||||||||  || |||||||||||||    
T  10396526 accacactcttatccaaaaccctaaggcaatgggtttatgggtctcctctcttatatatcc 10396466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 18932793 - 18932837
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||    
T  18932793 acaccacactcttacctaaaaccttaaggcaatgggtttatgggt 18932837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 22028005 - 22028049
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  22028005 acaccacattcttacccaaaaccttaaggcaatatgtttatgggt 22028049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 36629349 - 36629305
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  36629349 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 36629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 55933168 - 55933212
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  55933168 acaccacactcttacccaaaactttaaggcaatgggtttatgggt 55933212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 52885000 - 52884957
Alignment:
Q  139 acaccacattcttaccc-aaaaccttaaggcaatgggtttatgg 181  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  52885000 acaccacattcttaccccaaaaccttaaggcaatgggtttatgg 52884957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 3271895 - 3271853
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  3271895 cacactcttacccaaaaccttaaggcaataggtttatgggttc 3271853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 4955364 - 4955402
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  4955364 ccacactcttacccaaaaccttaaggcaatgggtttatg 4955402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 22183311 - 22183352
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||| ||||||||||||||||||||||||||||||    
T  22183311 ccacactcttatccaaaaccttaaggcaatgggtttatgggt 22183352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 23817725 - 23817766
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  23817725 acaccacactcttacccaaaaccttaaggcaatgagtttatg 23817766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 31691261 - 31691220
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  31691261 ccacactcttacccaaaaccttaaggcaatgagtttatgggt 31691220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 34646693 - 34646734
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  34646693 acaccacactcttacccaaaaccttaaggcaatgagtttatg 34646734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 39404510 - 39404466
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||| |||||||||||||||| || |||||||||||    
T  39404510 acaccacattcttgcccaaaaccttaaggctataggtttatgggt 39404466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 41370469 - 41370425
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||    
T  41370469 acactacactcttacccaaaactttaaggcaatgggtttatgggt 41370425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 49880272 - 49880228
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||  |||||||||||||||||||||| |||||||||||||    
T  49880272 acaccacgctcttacccaaaaccttaaggcagtgggtttatgggt 49880228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 50002538 - 50002494
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||    
T  50002538 acaccacactcttacccaaaaccttaagacaatggatttatgggt 50002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 54017643 - 54017683
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  54017643 cacactcttacctaaaaccttaaggcaatgggtttatgggt 54017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 54109024 - 54108981
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  54109024 acaccacactcttacccaaaac-ttaaggcaatgggtttatgggt 54108981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 39792904 - 39792943
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggttta 178  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  39792904 acaccacactcttacccaaaaccttaaggcaatgagttta 39792943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 44621116 - 44621073
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||    
T  44621116 aaacaccacactcttacccaaaaccttaagacaatgagtttatg 44621073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 54343052 - 54343087
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatggg 174  Q
    |||||||| |||||||||||||||||||||||||||    
T  54343052 acaccacactcttacccaaaaccttaaggcaatggg 54343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 10246031 - 10245989
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| |||||||||||||||||||||  |||||||||||    
T  10246031 acaccacactcttacccaaaaccttaaggctttgggtttatgg 10245989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 20825950 - 20825904
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||    
T  20825950 aaacaccacactcttacccaaaaccttaaggctaaaggtttatgggt 20825904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 36608705 - 36608747
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||||||||||||||||| |||||| |||||||    
T  36608705 acaccacactcttacccaaaaccttaagacaatggatttatgg 36608747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 45484817 - 45484771
Alignment:
Q  153 cccaaaaccttaaggcaatgggtttatgggttcccactcttatatat 199  Q
    ||||||||||||||||| ||||||||||||||| | | |||||||||    
T  45484817 cccaaaaccttaaggcattgggtttatgggttctctcacttatatat 45484771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 49076875 - 49076921
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||| ||| ||||||||||||||||  ||||||||||||||||    
T  49076875 acaccacactctaacccaaaaccttaaggttatgggtttatgggttc 49076921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 2741180 - 2741139
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||  ||||||||    
T  2741180 ccacactcttacccaaaaccttaaggcaatggagttatgggt 2741139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 15841416 - 15841453
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  15841416 cacactcttacccaaaaccttaaggcaatgtgtttatg 15841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 32941171 - 32941208
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  32941171 cacactcttacccaaaaccttaaggcaatgagtttatg 32941208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 52884808 - 52884767
Alignment:
Q  139 acaccacattcttaccc-aaaaccttaaggcaatgggtttat 179  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  52884808 acaccacactcttaccccaaaaccttaaggcaatgggtttat 52884767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 3244499 - 3244539
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||||||||||| ||||| ||||| ||||||||||    
T  3244499 cacattcttacccaaaactttaagacaatgagtttatgggt 3244539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 8445808 - 8445748
Alignment:
Q  16 cacactaggatcccgctcccgct-ccccactaagcctaaccacgactttgataccactgtt 75  Q
    |||||||||||||| |||||||| ||||||  |||||||||| | || |||||||||||||    
T  8445808 cacactaggatcccactcccgctaccccaccgagcctaaccagggctctgataccactgtt 8445748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 10396243 - 10396183
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatat 199  Q
    |||||||  ||||||| |||||| |||||||||||||||||||||   | |||||||||||    
T  10396243 acaccaccctcttacctaaaaccctaaggcaatgggtttatgggtcttctctcttatatat 10396183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 22028413 - 22028457
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||| ||||| ||||| ||||||||||    
T  22028413 acaccacactcttacccaaaacattaagacaatgagtttatgggt 22028457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 36572131 - 36572087
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||| | ||| |||||||||||||||||||||| |||||||||    
T  36572131 acaccatactctaacccaaaaccttaaggcaatggatttatgggt 36572087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 45496917 - 45496877
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttat 179  Q
    |||||||| ||||||||||||||||||| ||||| ||||||    
T  45496917 acaccacactcttacccaaaaccttaagacaatgagtttat 45496877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 25293562 - 25293662
Alignment:
Q  70 actgttggggagtccggggagccccgggagcggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggca 169  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||| | || |||||||| |||||| ||||||||| |||||||||||||||||| |||    
T  25293562 actgttggggagtccgaggagccccgagagcggcaatgggtcaaacatacaggaccataagagacttgaacaccacactcttacccaaaaccttaaagca 25293661  T
Q  170 a 170  Q
    |    
T  25293662 a 25293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 17294689 - 17294645
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  17294689 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 17294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 26661568 - 26661612
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  26661568 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 26661612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 26661944 - 26661988
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  26661944 acaccacactcttacccaaaaccttaaggcaatcggtttatgggt 26661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 34365037 - 34364993
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  34365037 acaccacactcttacccaaaaccttaaggctatgggtttatgggt 34364993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 44290504 - 44290548
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    
T  44290504 acaccatactcttacccaaaaccttaaggcaatgggtttatgggt 44290548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 3875380 - 3875418
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  3875380 ccacattcttacctaaaaccttaaggcaatgggtttatg 3875418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 37556223 - 37556181
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||||||||||||||||||| ||||||||||||    
T  37556223 acaccacactcttacccaaaaccttaaggctatgggtttatgg 37556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 41759595 - 41759553
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  41759595 acaccacactcttacccaaaaccttaaggcaatggatttatgg 41759553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 3550832 - 3550791
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  3550832 acaccacactcttacccaaaactttaaggcaatgggtttatg 3550791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 32168747 - 32168788
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  32168747 ccacactcttacccaaaacctcaaggcaatgggtttatgggt 32168788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 44290882 - 44290915
Alignment:
Q  150 ttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||||||||||||||    
T  44290882 ttacccaaaaccttaaggcaatgggtttatgggt 44290915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 14318979 - 14318935
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||||| | |||||||||    
T  14318979 acaccacactcttacccaaaaccttaaggcaatagatttatgggt 14318935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 27686529 - 27686593
Alignment:
Q  99 gcggcaatgggccaaacgtccaagacca-taacagacttaaacaccacattcttacccaaaacct 162  Q
    |||||||||| | ||| ||||||||||| ||| ||||||| |||||||| |||||||||||||||    
T  27686529 gcggcaatggactaaatgtccaagaccaataagagacttagacaccacactcttacccaaaacct 27686593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 32594762 - 32594806
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||    
T  32594762 acaccacactcttacccaaaaccttaagacaatgagtttatgggt 32594806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 41157103 - 41157059
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||| |||||| ||||||||||    
T  41157103 acaccacactcttacccaaaaccttaaagcaatgagtttatgggt 41157059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 41157487 - 41157443
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||    
T  41157487 acaccacactcttactcaaaacctaaaggcaatgggtttatgggt 41157443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 44043818 - 44043862
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||    
T  44043818 acaccacactcttacccaaaatcttaagacaatgggtttatgggt 44043862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 45494020 - 45494062
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||    
T  45494020 acaccacactcttatccaaaactttaaggcaatgggtttatgg 45494062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 66136 - 66177
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||| || |||||||||||    
T  66136 ccacactcttacccaaaaccttaaggccataggtttatgggt 66177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 3537648 - 3537685
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttat 179  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  3537648 ccacactcttacccaaaaccttaagccaatgggtttat 3537685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 11977056 - 11977015
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| |||||||||||||||||||||| | ||||||||    
T  11977056 acaccacactcttacccaaaaccttaaggcattaggtttatg 11977015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 29798311 - 29798270
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||| |||| ||||||||||||||||||||||    
T  29798311 acaccacactcttatccaagaccttaaggcaatgggtttatg 29798270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 30630693 - 30630730
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  30630693 tcttacccaaaactttaaggcaatgtgtttatgggttc 30630730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 34649541 - 34649504
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||||||||||||||||| | |||||||||||||    
T  34649541 tcttacccaaaaccttaaggcattaggtttatgggttc 34649504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 41142473 - 41142440
Alignment:
Q  150 ttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||    
T  41142473 ttaccaaaaaccttaaggcaatgggtttatgggt 41142440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 5320011 - 5320055
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||| ||||||||||||||||||||| ||| ||||||||||    
T  5320011 acactacactcttacccaaaaccttaaggctatgagtttatgggt 5320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 197878 - 197770
Alignment:
Q  100 cggcaatgggccaaacgtccaagaccataacagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatat 199  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||| ||||| ||  || ||||||||||||| ||||||| ||||| |||||||||||    
T  197878 cggcaatgagccaaacgtccaggaccataagagacttaaacaccacactcttatcc--aatcttaaggcaatggatttatggattccctctcttatatat 197781  T
Q  200 cctttgcttct 210  Q
    |||||| ||||    
T  197780 cctttgtttct 197770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 560 - 604
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  560 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 36178651 - 36178695
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  36178651 acaccacactcttacccaaaaccttaaggcaatgggtttatgggt 36178695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 37895105 - 37895153
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  37895105 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgtgttc 37895153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 36178218 - 36178265
Alignment:
Q  140 caccacattcttacccaaaaccttaaggcaatgggtttatgggttccc 187  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  36178218 caccacactcttacccaaaatcttaaggcaatgggtttatgggttccc 36178265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 37106302 - 37106256
Alignment:
Q  137 aaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||    
T  37106302 aaacaccacactcttacccaaaaccttaaggaaatgggtttatgggt 37106256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 14745343 - 14745384
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  14745343 ccacactcttacccaaaaccttaaggcaatgggtttatgggt 14745384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 14745716 - 14745757
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  14745716 ccacactcttacccaaaaccttaaggcaatgggtttatgggt 14745757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 15880372 - 15880331
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  15880372 ccacactcttacccaaaaccttaaggcaatgggtttatgggt 15880331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 6421843 - 6421799
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  6421843 acaccacactcttacccaaaaccttaaggcaataggtttatgggt 6421799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 28254283 - 28254327
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  28254283 acaccacactcttacccaaaaccttaaggcaatgagtttatgggt 28254327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 29874072 - 29874113
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||| ||||||||||||||||||||||||||||||    
T  29874072 ccacactcttatccaaaaccttaaggcaatgggtttatgggt 29874113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 35580779 - 35580812
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    ||||||||||||||||||||||||||||||||||    
T  35580779 tcttacccaaaaccttaaggcaatgggtttatgg 35580812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 962706 - 962666
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  962706 cacactcttacccaaaaccttaagacaatgggtttatgggt 962666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 3672813 - 3672773
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttat 179  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  3672813 acaccacactcttacccaaaatcttaaggcaatgggtttat 3672773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 5542671 - 5542715
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||    
T  5542671 acaccacactcttaccaaaaaccttaaggcaataggtttatgggt 5542715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 6422222 - 6422178
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  6422222 acaccacactcttacctaaaaccttaaggctatgggtttatgggt 6422178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 7598340 - 7598296
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  7598340 acaccatattcttacccaaaaccttaaggctatgagtttatgggt 7598296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 15511541 - 15511585
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||    
T  15511541 acaccacactcttacccaaaatcttaagacaatgggtttatgggt 15511585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 31468800 - 31468840
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||||||||| ||||||||||    
T  31468800 cacactcttacccaaaaccttaaggcaatgagtttatgggt 31468840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 37106036 - 37105992
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||    
T  37106036 acaccacactcttacccaaaatcttaaggcaatgagtttatgggt 37105992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 35580495 - 35580530
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||||| ||||||||||    
T  35580495 tcttacccaaaaccttaaggcaatgagtttatgggt 35580530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 40679678 - 40679721
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggttc 185  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||    
T  40679678 ccacactcttacccaaaatcttaaggcgatgggtttatgggttc 40679721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 5543044 - 5543086
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||| |||||||||||| ||||||||||| |||||||||    
T  5543044 acaccacactcttacccaaaatcttaaggcaataggtttatgg 5543086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 28226449 - 28226387
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggttcccactcttatatatcc 201  Q
    |||||||| ||||||| |||||| |||| ||||| ||||||||||  || |||||||||||||    
T  28226449 acaccacactcttacctaaaaccctaagacaatgtgtttatgggtctcctctcttatatatcc 28226387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 28531361 - 28531403
Alignment:
Q  140 caccacattcttacccaaaaccttaaggcaatgggtttatggg 182  Q
    ||||||| |||||||||||| |||||||||||| |||||||||    
T  28531361 caccacactcttacccaaaatcttaaggcaatgagtttatggg 28531403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 183
Target Start/End: Complemental strand, 31385835 - 31385805
Alignment:
Q  153 cccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||||||||||||||||||||||||||    
T  31385835 cccaaaaccttaaggcaatgggtttatgggt 31385805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 33731760 - 33731718
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||| | |||||||||||||||||||||||| |||||||||    
T  33731760 acaccatactcttacccaaaaccttaaggcaataggtttatgg 33731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 40053414 - 40053288
Alignment:
Q  2 atcactagcctgatc-acactaggatcccgctcccgctccccactaagcctaaccacgactttgataccact-gttggggagtccggggagccccgggag 99  Q
    ||||||||||||||| |  |||||||||| || ||||||||||   |||||||  | | || |||||||| | || ||||||||| ||||||  ||||||    
T  40053414 atcactagcctgatccaggctaggatcccacttccgctccccatcgagcctaatgagggctctgataccaattgtaggggagtcctgggagcgacgggag 40053315  T
Q  100 cggcaatgggccaaacgtccaagacca 126  Q
    |||||||| || |||||| ||||||||    
T  40053314 cggcaatgagctaaacgttcaagacca 40053288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 6421497 - 6421456
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||||| ||||||||||||||| ||||||||| |||||||    
T  6421497 acaccacactcttacccaaaacctcaaggcaatgagtttatg 6421456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 30323573 - 30323536
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttat 179  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  30323573 ccacactcttacccaaaaccttaaggcaatgagtttat 30323536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 36005937 - 36005970
Alignment:
Q  150 ttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||||||||||||||||||||| ||||||||||    
T  36005937 ttacccaaaaccttaaggcaatgagtttatgggt 36005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 41283524 - 41283565
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||    
T  41283524 ccacactcttacctaaaaccttaaggcaatgagtttatgggt 41283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 42514758 - 42514717
Alignment:
Q  142 ccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    ||||| |||||||||||| |||||||| ||||||||||||||    
T  42514758 ccacactcttacccaaaatcttaaggcgatgggtttatgggt 42514717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 6421738 - 6421694
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||| || |||| |||||||||||    
T  6421738 acaccacactcttacccaaaacctttagtcaataggtttatgggt 6421694  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 29677020 - 29676976
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||  ||| ||||||||||||||||||||||||    
T  29677020 acaccacactcttacttaaagccttaaggcaatgggtttatgggt 29676976  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 33561501 - 33561541
Alignment:
Q  143 cacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||| ||||||||||||||||||| ||||| ||||||||||    
T  33561501 cacactcttacccaaaaccttaagacaatgagtttatgggt 33561541  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 36178324 - 36178356
Alignment:
Q  148 tcttacccaaaaccttaaggcaatgggtttatg 180  Q
    ||||||||||||||||||| |||||||||||||    
T  36178324 tcttacccaaaaccttaagacaatgggtttatg 36178356  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 37632643 - 37632687
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||||||| |  ||||||||||||||    
T  37632643 acaccacactcttacccaaaaccttaaagttatgggtttatgggt 37632687  T

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Target: scaffold0391 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 1737 - 1781
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||    
T  1737 acaccacactcttaccaaaaaccttaaggcaatgggtttatgggt 1781  T

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Target: scaffold0391; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 1152 - 1193
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatg 180  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  1152 acaccatactcttacccaaaaccttaaggcaatgggtttatg 1193  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 47472 - 47430
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgg 181  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  47472 acaccacatttttacccaaaactttaaggcaatgggtttatgg 47430  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 5094 - 5050
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||    
T  5094 acaccacactcttacccaaaaccataaggcaatgagtttatgggt 5050  T

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Target: scaffold0078; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 5469 - 5425
Alignment:
Q  139 acaccacattcttacccaaaaccttaaggcaatgggtttatgggt 183  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||    
T  5469 acaccacactcttatccaaaatcttaaggcaatgggtttatgggt 5425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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