View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2703_high_36 (Length: 335)
Name: NF2703_high_36
Description: NF2703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2703_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 20 - 320
Target Start/End: Original strand, 33556272 - 33556572
Alignment:
| Q |
20 |
acttgaagttcggactcgtgtacaccggctttgtgagttgcattccaggcactgcagccccgtaccacagtcattgacgtcgcgggagcatgtttcccca |
119 |
Q |
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| T |
33556272 |
acttgaagttcggactcgtgtacaccggctttgtgagttgcattccaggcactgcagccccgtaccacagtcattgacgtcgcgggagcatgtttcccca |
33556371 |
T |
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| Q |
120 |
atctgttatgaattgttgctcacatgaaacaaaaatatgtccttaaaatcttgatcatagattatttgatgaattgaagatgaagagaatatactaacac |
219 |
Q |
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| T |
33556372 |
atctgttatgaattgttgctcacatgaaacaaaaatatgtccttaaaatcttgatcatagattatttgatgaattgaagatgaagagaatatactaacac |
33556471 |
T |
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| Q |
220 |
tttgcaacttttgatattaagctttaagaatctcaaatttttagggttaggatgaagtgttaaaatttaattgtgaaatgtctagagtcatgatgccttt |
319 |
Q |
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| T |
33556472 |
tttgcaacttttgatattaagctttaagaatctcaaatttttagggttaggatgaagtgttaaaatttaattgtgaaatgtctagagtcatgatgccttt |
33556571 |
T |
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| Q |
320 |
g |
320 |
Q |
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| T |
33556572 |
g |
33556572 |
T |
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