View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2703_high_57 (Length: 243)
Name: NF2703_high_57
Description: NF2703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2703_high_57 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 36287403 - 36287197
Alignment:
| Q |
18 |
caggttcatatcctccaacttcaactcaaacacaacctcctccaacttagatagaacattttgatcataccccacatccatggccacatgaggaactcgt |
117 |
Q |
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| T |
36287403 |
caggttcatatcctccaacttcaactcagacacaacctcctccaacttagatagaacattttgatcataccccacatccatggccacatgaggaactcgt |
36287304 |
T |
|
| Q |
118 |
gaatttcaccatccacgtgtgaattgagctgtatccaggattttttctcactcgcccnnnnnnngcaatgaaaatattcaggtggaatttttaaccgtag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| |||| |
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| T |
36287303 |
gaatttcaccatccacgtgtgaattgagctgtatccaggaatttttctcactcgccctttttttgcactgaaaatattcaggtggaatttttaactgtag |
36287204 |
T |
|
| Q |
218 |
ttcatcc |
224 |
Q |
| |
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||||||| |
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| T |
36287203 |
ttcatcc |
36287197 |
T |
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