View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2703_high_60 (Length: 237)

Name: NF2703_high_60
Description: NF2703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2703_high_60
NF2703_high_60
[»] chr6 (38 HSPs)
chr6 (23-198)||(12211026-12211198)
chr6 (26-198)||(12210771-12210946)
chr6 (26-199)||(12163983-12164159)
chr6 (26-198)||(12163728-12163900)
chr6 (108-198)||(12211159-12211249)
chr6 (107-198)||(12212827-12212918)
chr6 (26-147)||(12164241-12164365)
chr6 (107-199)||(12192326-12192418)
chr6 (107-198)||(12211209-12211300)
chr6 (89-175)||(12192236-12192322)
chr6 (108-169)||(12163861-12163922)
chr6 (107-169)||(12210906-12210968)
chr6 (116-169)||(12164364-12164417)
chr6 (107-198)||(12211260-12211351)
chr6 (140-198)||(12192308-12192366)
chr6 (74-147)||(12163173-12163246)
chr6 (107-168)||(12211311-12211372)
chr6 (128-183)||(12212797-12212852)
chr6 (65-147)||(12163263-12163345)
chr6 (65-147)||(12163452-12163534)
chr6 (107-169)||(12164118-12164180)
chr6 (107-169)||(12179398-12179460)
chr6 (107-169)||(12192479-12192541)
chr6 (89-169)||(12179086-12179166)
chr6 (107-199)||(12179245-12179337)
chr6 (92-147)||(12163539-12163594)
chr6 (65-144)||(12163611-12163690)
chr6 (107-169)||(12212878-12212940)
chr6 (95-144)||(12164214-12164263)
chr6 (107-183)||(12179347-12179423)
chr6 (107-195)||(12192377-12192465)
chr6 (107-183)||(12192428-12192504)
chr6 (95-144)||(12163956-12164005)
chr6 (103-147)||(12163361-12163405)
chr6 (107-195)||(12179296-12179384)
chr6 (91-147)||(12210680-12210736)
chr6 (92-144)||(12210999-12211051)
chr6 (155-195)||(12211011-12211051)


Alignment Details
Target: chr6 (Bit Score: 146; Significance: 5e-77; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 12211026 - 12211198
Alignment:
Q  23 gtctacaagtataagtcacctcctcctccttacaagtactcatctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12211026 gtctacaagtataagtcacctcctcctccttacaagtactcatctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagttt 12211125  T
Q  123 acaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    ||||||||||||||||||||||||||||||||||||||   |||||| | ||||||||||| ||||| ||||||||    
T  12211126 acaagtataaatctcctcctccacctgtctactcacca---ccaccaatttacaagtataagtcacctcctccacc 12211198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 12210771 - 12210946
Alignment:
Q  26 tacaagtataagtcacctcctcctcc---ttacaagtactcatctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagttt 122  Q
    |||||||| |||||||||||||| ||   ||||||||||  |||||| || ||||| || |||||||||||||||||  |||| |||||||| |||||||    
T  12210771 tacaagtacaagtcacctcctcccccagtttacaagtacaaatctccacccccaccacccaagaaaccatacaagtattcatcaccaccaccaccagttt 12210870  T
Q  123 acaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||    
T  12210871 acaagtataagtctcctcctccacctgtttactcaccacctccaccagtttacaagtataaatctcctcctccacc 12210946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 12163983 - 12164159
Alignment:
Q  26 tacaagtataagtcacctcctcctcc---ttacaagtactcatctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagttt 122  Q
    |||||||| |||||||||||||| ||   ||||||||||  |||||| || ||||| || ||||||||||||||||| ||||| |||||||| |||||||    
T  12163983 tacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagtatccatcaccaccaccaccagttt 12164082  T
Q  123 acaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccaccc 199  Q
    |||| ||||| || |||||||||||||| |||||||||||||||||||| ||||||||||| || || |||||||||    
T  12164083 acaaatataagtcccctcctccacctgtatactcaccacctccaccagtttacaagtataagtctcctcctccaccc 12164159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 12163728 - 12163900
Alignment:
Q  26 tacaagtataagtcacctcctcctcc---ttacaagtactcatctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagttt 122  Q
    ||||||||||||||||||||||| ||   ||||||||||  |||||| || ||||| || ||||||||||||||||| ||||| |||||||| |||||||    
T  12163728 tacaagtataagtcacctcctcccccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagtatccatcaccaccaccaccagttt 12163827  T
Q  123 acaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    |||||||||| ||||| |||||||||||||||||||||   |||||||| ||||||||||| || || ||||||||    
T  12163828 acaagtataagtctccccctccacctgtctactcacca---ccaccagtttacaagtataagtctcctcctccacc 12163900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 12211159 - 12211249
Alignment:
Q  108 caccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    ||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12211159 caccaccaccaatttacaagtataagtcacctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 12211249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 12212827 - 12212918
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    ||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| || || ||||||||    
T  12212827 ccacctccaccagtatacaagtataagtctcctcccccacctgtctactcaccacctccaccagtatacaagtataagtcccctcctccacc 12212918  T

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Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 12164241 - 12164365
Alignment:
Q  26 tacaagtataagtcacctcctcctcc---ttacaagtactcatctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagttt 122  Q
    |||||||| || ||||||||||||||   ||||||||||  |||||| || ||||| || ||||||||||||||||||||||| |||||||| || ||||    
T  12164241 tacaagtacaaatcacctcctcctccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagtacccatcaccaccaccacccgttt 12164340  T
Q  123 acaagtataaatctcctcctccacc 147  Q
    |||| ||||| || |||||||||||    
T  12164341 acaaatataagtcccctcctccacc 12164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 12192326 - 12192418
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccaccc 199  Q
    |||||||| |||||||||||||| || || || |||||||||||||||||||||||||||||||| |||||||| || || || |||||||||    
T  12192326 ccaccaccaccagtttacaagtacaagtcaccccctccacctgtctactcaccacctccaccagtttacaagtacaagtccccacctccaccc 12192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 12211209 - 12211300
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    ||||| || ||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||    
T  12211209 ccacctccaccagtctacaagtataaatcaccccctccacctgtctactcaccacctccaccagtttacaaatataagtcacctcccccacc 12211300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 12192236 - 12192322
Alignment:
Q  89 ccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctac 175  Q
    |||||||| ||| | || |||||||| |||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||    
T  12192236 ccatacaaatacgcttccccaccaccaccagtttacaagtataaatcaccacccccacctgtctactcaccacctccacctgtctac 12192322  T

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Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 12163861 - 12163922
Alignment:
Q  108 caccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  12163861 caccaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 12163922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 12210906 - 12210968
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    ||||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  12210906 ccacctccaccagtttacaagtataaatctcctcctccaccagtttactcaccacctccacca 12210968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 12164364 - 12164417
Alignment:
Q  116 ccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  12164364 ccagtttacaagtataaatctcctcctccacctgttcactcaccacctccacca 12164417  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 12211260 - 12211351
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    ||||| || ||||||||||| ||||| || ||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| || |||||    
T  12211260 ccacctccaccagtttacaaatataagtcacctcccccacctgtctactcaccaccaccaccagtttacaaatataagtcacctcccccacc 12211351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 12192308 - 12192366
Alignment:
Q  140 cctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccacc 198  Q
    ||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||    
T  12192308 cctccacctgtctactcaccaccaccaccagtttacaagtacaagtcaccccctccacc 12192366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 12163173 - 12163246
Alignment:
Q  74 ccacctccaaagaaaccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacc 147  Q
    |||||||||||||| |||||||| ||| | ||||| ||||| |||||||||||||| ||||| |||||||||||    
T  12163173 ccacctccaaagaagccatacaaatacgcttctcctccacctccagtttacaagtacaaatcacctcctccacc 12163246  T

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Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 12211311 - 12211372
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacc 168  Q
    |||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||||||    
T  12211311 ccaccaccaccagtttacaaatataagtcacctcccccacctgtctactcaccacctccacc 12211372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 12212797 - 12212852
Alignment:
Q  128 tataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataa 183  Q
    ||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  12212797 tataagtcacctcccccacctgtctactcaccacctccaccagtatacaagtataa 12212852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 12163263 - 12163345
Alignment:
Q  65 tctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacc 147  Q
    ||||| |||||||| || ||||| ||||| || || |||||||||||||| |||||||||||||| || || |||||||||||    
T  12163263 tctcctcctccaccaccgaagaagccatataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccacc 12163345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 12163452 - 12163534
Alignment:
Q  65 tctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacc 147  Q
    ||||| || ||||| || ||||| ||||| || ||||||||||||||||| |||||||||||||| ||||| ||||| |||||    
T  12163452 tctcctccaccaccacctaagaagccatataaatacccatctccaccaccgccagtttacaagtacaaatcacctccaccacc 12163534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 12164118 - 12164180
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    ||||| || ||||||||||||||||| |||||||||||||| ||| | |||||||||||||||    
T  12164118 ccacctccaccagtttacaagtataagtctcctcctccacccgtcaattcaccacctccacca 12164180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 12179398 - 12179460
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||  ||||||||||||||||||    
T  12179398 ccacctccaccagtttacaagtataagtctcctcctcctcctgcttactcaccacctccacca 12179460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 12192479 - 12192541
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||  ||||||||||||||||||    
T  12192479 ccacctccaccagtttacaagtataagtctcctcctcctcctgcatactcaccacctccacca 12192541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 12179086 - 12179166
Alignment:
Q  89 ccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    |||||||| ||| | ||||||||||| ||||||||||| || || || || |||||||| |||||||||||||| ||||||    
T  12179086 ccatacaaatacgcttctccaccaccaccagtttacaaatacaagtccccacctccacccgtctactcaccaccaccacca 12179166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 12179245 - 12179337
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctccaccc 199  Q
    |||||||| |||||||||||||| || || || | |||||| || |||||||||||||||||||| ||||| || || || || |||||||||    
T  12179245 ccaccaccaccagtttacaagtacaagtccccacgtccacccgtttactcaccacctccaccagtttacaactacaagtccccacctccaccc 12179337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 12163539 - 12163594
Alignment:
Q  92 tacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacc 147  Q
    |||||||||  |||||| ||||| |||||||||||||||||||| |||||||||||    
T  12163539 tacaagtacaaatctcctccaccaccagtttacaagtataaatcccctcctccacc 12163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 12163611 - 12163690
Alignment:
Q  65 tctccccctccacctccaaagaaaccatacaagtacccatctccaccacccccagtttacaagtataaatctcctcctcc 144  Q
    ||||| || ||||| ||||| || ||||| || ||||||||||| ||||| |||||||||||||| ||||| ||||||||    
T  12163611 tctcctccaccaccaccaaaaaagccatataaatacccatctcccccaccaccagtttacaagtacaaatcacctcctcc 12163690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 12212878 - 12212940
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccacca 169  Q
    ||||| || ||||| ||||||||||| || |||||||||||||| | ||||||||||||||||    
T  12212878 ccacctccaccagtatacaagtataagtcccctcctccacctgtttcctcaccacctccacca 12212940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 12164214 - 12164263
Alignment:
Q  95 aagtacccatctccaccacccccagtttacaagtataaatctcctcctcc 144  Q
    ||||||||||| |||||||| |||||||||||||| ||||| ||||||||    
T  12164214 aagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcc 12164263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 12179347 - 12179423
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataa 183  Q
    ||||| ||||| ||||||| ||| || || || ||||| || ||||| ||||||||||||||||| |||||||||||    
T  12179347 ccacctcccccggtttacacgtacaagtcaccacctcctcccgtctattcaccacctccaccagtttacaagtataa 12179423  T

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Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 12192377 - 12192465
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctcc 195  Q
    ||||| || |||||||||||||| || || || |||||||| ||||||||||||||||| || || || ||||| || ||||| |||||    
T  12192377 ccacctccaccagtttacaagtacaagtccccacctccacccgtctactcaccacctcccccggtttataagtacaagtcaccacctcc 12192465  T

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Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 12192428 - 12192504
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataa 183  Q
    ||||| ||||| ||||| ||||| || || || ||||| || ||||| ||||||||||||||||| |||||||||||    
T  12192428 ccacctcccccggtttataagtacaagtcaccacctcctcccgtctattcaccacctccaccagtttacaagtataa 12192504  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 12163956 - 12164005
Alignment:
Q  95 aagtacccatctccaccacccccagtttacaagtataaatctcctcctcc 144  Q
    ||||||||||| |||||||| |||||||||||||| || || ||||||||    
T  12163956 aagtacccatcaccaccaccaccagtttacaagtacaagtcacctcctcc 12164005  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 12163361 - 12163405
Alignment:
Q  103 atctccaccacccccagtttacaagtataaatctcctcctccacc 147  Q
    |||||| ||||| |||||||||||||| ||||| |||||||||||    
T  12163361 atctcctccaccaccagtttacaagtacaaatcacctcctccacc 12163405  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 12179296 - 12179384
Alignment:
Q  107 ccaccacccccagtttacaagtataaatctcctcctccacctgtctactcaccacctccaccagtctacaagtataaatcaccccctcc 195  Q
    ||||| || ||||||||||| || || || || |||||||| ||||||||||||||||| || || |||| ||| || ||||| |||||    
T  12179296 ccacctccaccagtttacaactacaagtccccacctccacccgtctactcaccacctcccccggtttacacgtacaagtcaccacctcc 12179384  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 12210680 - 12210736
Alignment:
Q  91 atacaagtacccatctccaccacccccagtttacaagtataaatctcctcctccacc 147  Q
    |||||| ||||| ||||| ||||| ||||| |||||||| ||||| |||||||||||    
T  12210680 atacaaatacccttctcctccaccaccagtatacaagtacaaatcacctcctccacc 12210736  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 12210999 - 12211051
Alignment:
Q  92 tacaagtacccatctccaccacccccagtttacaagtataaatctcctcctcc 144  Q
    ||||||||| |||| |||||||| ||||| ||||||||||| || ||||||||    
T  12210999 tacaagtactcatcaccaccaccaccagtctacaagtataagtcacctcctcc 12211051  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 12211011 - 12211051
Alignment:
Q  155 tcaccacctccaccagtctacaagtataaatcaccccctcc 195  Q
    |||||||| |||||||||||||||||||| ||||| |||||    
T  12211011 tcaccaccaccaccagtctacaagtataagtcacctcctcc 12211051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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