View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2703_low_2 (Length: 873)

Name: NF2703_low_2
Description: NF2703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2703_low_2
NF2703_low_2
[»] chr4 (6 HSPs)
chr4 (16-355)||(53257395-53257744)
chr4 (356-840)||(54260056-54260528)
chr4 (356-429)||(563342-563415)
chr4 (366-422)||(32760428-32760484)
chr4 (502-548)||(26261054-26261100)
chr4 (403-436)||(54432626-54432659)
[»] chr3 (23 HSPs)
chr3 (356-840)||(39579803-39580296)
chr3 (356-792)||(39674088-39674532)
chr3 (424-839)||(958813-959237)
chr3 (355-840)||(4533370-4533873)
chr3 (356-840)||(25041248-25041742)
chr3 (356-783)||(53330421-53330860)
chr3 (356-783)||(53334105-53334544)
chr3 (356-783)||(53337782-53338221)
chr3 (496-840)||(42864321-42864669)
chr3 (731-839)||(21869148-21869256)
chr3 (356-431)||(42864250-42864325)
chr3 (356-431)||(53363124-53363199)
chr3 (361-460)||(27391312-27391411)
chr3 (363-460)||(29359666-29359763)
chr3 (369-439)||(24645629-24645699)
chr3 (629-777)||(22976519-22976673)
chr3 (778-839)||(22976432-22976493)
chr3 (363-419)||(41530477-41530533)
chr3 (506-549)||(29359730-29359773)
chr3 (778-833)||(29360074-29360129)
chr3 (567-624)||(22976735-22976792)
chr3 (567-624)||(29359788-29359845)
chr3 (744-777)||(29360014-29360047)
[»] scaffold0017 (1 HSPs)
scaffold0017 (361-840)||(37725-38223)
[»] chr7 (25 HSPs)
chr7 (356-840)||(19927928-19928419)
chr7 (355-840)||(30947455-30947962)
chr7 (356-840)||(25443519-25444001)
chr7 (356-655)||(40819769-40820069)
chr7 (356-630)||(37245166-37245443)
chr7 (684-840)||(40819605-40819768)
chr7 (685-840)||(26279619-26279781)
chr7 (356-547)||(26279779-26279982)
chr7 (356-460)||(22205365-22205469)
chr7 (356-460)||(22229270-22229374)
chr7 (626-716)||(37243004-37243094)
chr7 (356-458)||(36281520-36281622)
chr7 (367-460)||(45280678-45280771)
chr7 (497-626)||(45280729-45280859)
chr7 (361-460)||(36630337-36630436)
chr7 (495-549)||(15043301-15043355)
chr7 (495-549)||(26279858-26279912)
chr7 (495-549)||(36630392-36630446)
chr7 (407-460)||(15043311-15043364)
chr7 (495-552)||(22205352-22205409)
chr7 (495-552)||(22229330-22229387)
chr7 (778-829)||(22205008-22205059)
chr7 (778-829)||(22229680-22229731)
chr7 (779-829)||(22293205-22293255)
chr7 (404-458)||(25556691-25556745)
[»] chr6 (3 HSPs)
chr6 (355-839)||(21111998-21112490)
chr6 (356-840)||(8861950-8862433)
chr6 (356-666)||(11382414-11382737)
[»] chr2 (5 HSPs)
chr2 (355-840)||(14811174-14811679)
chr2 (355-840)||(14314062-14314562)
chr2 (356-458)||(32751072-32751174)
chr2 (362-422)||(27709936-27709996)
chr2 (733-777)||(13043622-13043666)
[»] chr8 (21 HSPs)
chr8 (356-840)||(29054462-29054966)
chr8 (356-840)||(17630837-17631317)
chr8 (356-750)||(10861549-10861952)
chr8 (361-840)||(17068100-17068578)
chr8 (503-840)||(21076028-21076373)
chr8 (503-840)||(20289398-20289743)
chr8 (414-840)||(34964423-34964844)
chr8 (470-840)||(17579695-17580052)
chr8 (361-554)||(17580052-17580257)
chr8 (356-460)||(20289270-20289374)
chr8 (356-460)||(21075900-21076004)
chr8 (353-431)||(10786861-10786939)
chr8 (765-840)||(10861482-10861557)
chr8 (357-460)||(3046840-3046942)
chr8 (495-549)||(3046830-3046884)
chr8 (495-549)||(20289330-20289384)
chr8 (495-549)||(21075960-21076014)
chr8 (779-839)||(3046447-3046507)
chr8 (630-723)||(3046595-3046688)
chr8 (565-624)||(3046757-3046816)
chr8 (361-420)||(17048179-17048238)
[»] chr5 (12 HSPs)
chr5 (484-840)||(8871283-8871647)
chr5 (356-723)||(36606086-36606454)
chr5 (567-840)||(13854368-13854648)
chr5 (356-431)||(6665622-6665697)
chr5 (629-777)||(32659069-32659224)
chr5 (629-723)||(6665857-6665951)
chr5 (773-840)||(36606474-36606541)
chr5 (495-603)||(6665692-6665796)
chr5 (778-834)||(6666038-6666094)
chr5 (355-421)||(32658815-32658881)
chr5 (361-460)||(29794923-29795021)
chr5 (356-397)||(8871240-8871281)
[»] chr1 (8 HSPs)
chr1 (361-837)||(46397774-46398266)
chr1 (361-460)||(29096172-29096271)
chr1 (683-777)||(33369016-33369114)
chr1 (361-458)||(41430386-41430483)
chr1 (356-460)||(33368710-33368813)
chr1 (505-624)||(33368779-33368895)
chr1 (495-553)||(23206306-23206363)
chr1 (495-541)||(29096227-29096273)
[»] scaffold0274 (2 HSPs)
scaffold0274 (361-458)||(14400-14497)
scaffold0274 (495-537)||(14400-14442)
[»] scaffold0037 (1 HSPs)
scaffold0037 (361-420)||(4439-4498)


Alignment Details
Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 16 - 355
Target Start/End: Complemental strand, 53257744 - 53257395
Alignment:
Q  16 tctatagctaggacgtgcaattgcatatacttcttgcttcagcagagacagcgtgatgtcgaatttagagagtctgccaatgaacaaagacaacggtaat 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53257744 tctatagcgaggacgtgcaattgcatatacttcttgcttcagcagagacagcgtgatgtcgaatttagagagtctgccaatgaacaaagacaacggtaat 53257645  T
Q  116 tggttcaattttgatatcattaggttaatgtttgtgt----------gtggttttgatttgtctagtctaactgtaagtgttttgatttttgatattata 205  Q
    |||||||||||||||||||||||||||||||||||||          ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53257644 tggttcaattttgatatcattaggttaatgtttgtgtttgtttgtgtgtggttttgatttatctagtctaactgtaagtgttttgatttttgatattata 53257545  T
Q  206 gattgttgtcggatatatcgagatatgaggctaaagttgagagacttgatggacaactacaagctaaagatagagagatagcgacgataactagaacggt 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53257544 gattgttgtcggatatatcgagatatgaggctaaagttgagagacttgatggacaattacaagctaaagatagagagatagcgacgataactagaacggt 53257445  T
Q  306 gaggcaatgattttaaattatggtttcggtaaaatgtcaagcattgaatt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53257444 gaggcaatgattttaaattatggtttcggtaaaatgtcaagcattgaatt 53257395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 356 - 840
Target Start/End: Original strand, 54260056 - 54260528
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||           |||||||||| |||| ||||||||| ||||||||||||||||||    
T  54260056 ctctgaagccccgatactccaaaaatggtgaagtatcgtatctga-----------taccgatacgccccggtacgggtatgggaaaagtatcgggcaat 54260144  T
Q  456 taatannnnnnnnn---gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaa 552  Q
    |||||            |||||||||||||||||||||||||||||||||||||||||||||||||| ||           |||||||||||||||||||    
T  54260145 taatatttattttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggacaa-----------ttaatatttattttttgaa 54260233  T
Q  553 ggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    ||       || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||    
T  54260234 ggaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccgacacaacttacttatactccgacacctatcaagtctggcagcgctatcaaaat 54260333  T
Q  653 catattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactctg 745  Q
    ||||||||||||||||||||       || | |||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||    
T  54260334 catattgtctcttctaacctaaaaaaataggttttctcgtcaccacatagcaatagctattctctcttctaaccattaccactgattgaattctactctg 54260433  T
Q  746 tttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||    
T  54260434 tttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgttaactattaagtagtcaacattagacaaagatgttc 54260528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 356 - 429
Target Start/End: Complemental strand, 563415 - 563342
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgata 429  Q
    |||||||||||||||||||||||||| | |||| |||||||| ||||| ||||||||||||||||| |||||||    
T  563415 ctctaaagccccgatactccaaaaatcgcgaagaatcgtatctgacacatatccgataccgatacgccccgata 563342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 422
Target Start/End: Original strand, 32760428 - 32760484
Alignment:
Q  366 ccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgt 422  Q
    |||||||| |||||||||||||| ||||| ||| ||||||||| |||||||||||||    
T  32760428 ccgatacttcaaaaatggtgaagaatcgtgtccaacacgtatctgataccgatacgt 32760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 548
Target Start/End: Original strand, 26261054 - 26261100
Alignment:
Q  502 cccgatacgcgtatcggagaagtatcggacagttaatatttattttt 548  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||    
T  26261054 cccgatacgcatatcggagaagtatcgggcaattaatatttattttt 26261100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 436
Target Start/End: Original strand, 54432626 - 54432659
Alignment:
Q  403 cgtatccgataccgatacgtcccgatacgggtat 436  Q
    ||||||||||||||||||||||||||||| ||||    
T  54432626 cgtatccgataccgatacgtcccgatacgcgtat 54432659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 292; Significance: 1e-163; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 356 - 840
Target Start/End: Original strand, 39579803 - 39580296
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  39579803 ctctgaagccccgatactccaaaaatggtgaagtatcgtatctgacacgtatctgatactgatacgtcccgatacgggtatcggaaaagtatcgggcaat 39579902  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||     
T  39579903 taatatttatttttttgaaaaacaatgaccaatacgtgtcggatacgtcccgatatgcgtatcggagaagtatcggacaattaatatttattttttgaaa 39580002  T
Q  554 gnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatc 653  Q
    |       || ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| |||||||||| ||||||||||    
T  39580003 gaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccggcacagcttacttatactccgacacctatcaactctggcagcgctatcaaaatc 39580102  T
Q  654 atattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactctgt 746  Q
    ||| |||||||||||||||       || |||||||||||||||||||||||||||||||||| || |       ||||||||||||||||||||| |||    
T  39580103 ataatgtctcttctaacctaaaaaaatagggtttctcgtcaccacatagcaatagctattctctctaccaaccattaccactgattgaattctactttgt 39580202  T
Q  747 ttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  39580203 ttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgttaactgttaagtagtcaacattagacaaagatgttc 39580296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 356 - 792
Target Start/End: Original strand, 39674088 - 39674532
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  39674088 ctctgaagccccgatacttcaaaaatggtgaagtatcgtatccgacacgtattcgataccgatatgtcccgatacgggtatcagaaaagtatcgggcaat 39674187  T
Q  456 taatannnnnnnnng--aaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||            ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  39674188 taatatttatttttttaaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcgcaaaagtatcggacagttaatatttattttttgaag 39674287  T
Q  554 gnnnnnnntgg-ccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    |         | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||    
T  39674288 gaaaaaaaaagaccgatacgtgtcggatacgactaacttgtactccgacacaacttacttatactccgacacctatcaagtctgacagcgctatcaaaat 39674387  T
Q  653 catattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-----taccactgattgaattctactctgtt 747  Q
    ||||||||||||||||||||       || |||||||||||||||||||||||||||||||||| ||||     |||||||||||||||||||||| |||    
T  39674388 catattgtctcttctaacctaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctacattaccactgattgaattctactccgtt 39674487  T
Q  748 tctcgtctctctaatgttatgtttcttctgctgtttgttttcgat 792  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  39674488 tctcttctctctaatgttatgtttcttctgctgtttgttttcgat 39674532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 424 - 839
Target Start/End: Original strand, 958813 - 959237
Alignment:
Q  424 ccgatacgggtatcggaaaagtatcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggaga 521  Q
    |||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  958813 ccgatacgggtatcggaaaagtatcgggcaattaatatttatatttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggaga 958912  T
Q  522 agtatcggacagttaatatttattttttgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccga 621  Q
    ||||||  ||| |||||||||||||||||||||       || | |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||    
T  958913 agtatcaaacatttaatatttattttttgaaggaaaaaaatgactgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactctga 959012  T
Q  622 cacttatcaagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc 721  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||       || |||||||||||||||||||| ||||||||||||| ||||    
T  959013 cacctatcaagtctggcagcgctatcaaaatcatattgtctcttctaacctaaaaaaatagggtttctcgtcaccacatagaaatagctattctctcttc 959112  T
Q  722 -------taccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaa 814  Q
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  959113 taaccattaccactgattgaattctactctgtttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgataaccgttaa 959212  T
Q  815 gtagtcaacattagataaagatgtt 839  Q
    ||||||||||||||| |||||||||    
T  959213 gtagtcaacattagacaaagatgtt 959237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 355 - 840
Target Start/End: Original strand, 4533370 - 4533873
Alignment:
Q  355 tctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------tcccgatacgggtatcggaaaag 444  Q
    ||||| ||||| ||||||| | |||||||||||||||||||||||||||||||| ||||||||||||          | |||||||||||||||||||||    
T  4533370 tctctgaagccgcgatacttcgaaaatggtgaagtatcgtatccgacacgtatctgataccgatacgctccgatacgttccgatacgggtatcggaaaag 4533469  T
Q  445 tatcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatattt 542  Q
    ||||||||||||||||           |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||| |||||    
T  4533470 tatcgggcaattaatatttatttttttgaaaaacaatgaccgatatgtgtcggatacgttccgatacgcgtatcg-agaagtatcagacaattattattt 4533568  T
Q  543 attttttgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcg 642  Q
    ||||||||||||       || |||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||    
T  4533569 attttttgaaggaaaaaaatgaccgatacgcgtcagatacgactaacttgtactccgacacagcttacttatactccgacacctatcaagtttggcagcg 4533668  T
Q  643 gtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaa 735  Q
     ||||||||||||||| |||||||||||||       || ||||||||||||||||||| |||||||||||||| ||||       ||||||| ||||||    
T  4533669 ctatcaaaatcatattatctcttctaacctaaaataatagggtttctcgtcaccacataacaatagctattctctcttctaaccattaccacttattgaa 4533768  T
Q  736 ttctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaaga 835  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||||| |||||||||||||| |||||    
T  4533769 ttctactctgtttctcttctctctaatgttatgtttcttttgctgtttgttttcgatataaattattgttaactgttaattagtcaacattagacaaaga 4533868  T
Q  836 tgttc 840  Q
    |||||    
T  4533869 tgttc 4533873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 356 - 840
Target Start/End: Original strand, 25041248 - 25041742
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||||||||||||| ||||||||||||||||||||||| || |   ||  | | || ||||||||||||||| ||||| ||||||||||| |||||    
T  25041248 ctctgaagccccgatacttcaaaaatggtgaagtatcgtatctgataacgatatgtt-ccaatacgtcccgatacgagtatcagaaaagtatcgcgcaat 25041346  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  25041347 taatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccaatacgcgtattggagaagtatcggacaattaatatttattttttgaag 25041446  T
Q  554 gnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
             || | |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||| ||| |||||||||    
T  25041447 taaataaaatgactgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactccgacacctatcaagtctggctgcgctatcaaaat 25041546  T
Q  653 catattgtctcttctaacctnnnnnnn-tatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctactct 744  Q
    ||||||||||||||||||||        || ||||||||||||||||||||||||||||||||||  || ||       ||||||||| |||||||||||    
T  25041547 catattgtctcttctaacctaaaaaaaatagggtttctcgtcaccacatagcaatagctattctcttttttaaccattaccactgattaaattctactct 25041646  T
Q  745 gtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  25041647 gtttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgttaactgttaagtagtcaacattagacaaagatgttc 25041742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 356 - 783
Target Start/End: Complemental strand, 53330860 - 53330421
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | ||||||| |||||||||||||||||| ||||    
T  53330860 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacatgtatctgataccgatacgcctcgatacgcgtatcggaaaagtatcggacaat 53330761  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||| |||||||||| ||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||    
T  53330760 taatatttatttttttgaaaaacaatgaccaatacgtgtcgaatacgtcccgatacgcgtatcagaaaagcatcgggcagttaatatttattttttgaag 53330661  T
Q  554 gnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    |        || |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||| |||| || ||||||    
T  53330660 gaaaaaaaatgtccgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactcggacacctatcaagtctggaagcgctaccaaaat 53330561  T
Q  653 catattgtctcttctaac--ctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactc 743  Q
    ||||||||||||||||||           || |||||||||||||||||||||||||||||||||| ||||       || |||||||||||||||||||    
T  53330560 catattgtctcttctaacaaaaaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattatcactgattgaattctactc 53330461  T
Q  744 tgtttctcgtctctctaatgttatgtttcttctgctgttt 783  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  53330460 tgtttctcttctctctaatgttatgtttcttctgctgttt 53330421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 356 - 783
Target Start/End: Complemental strand, 53334544 - 53334105
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | ||||||| |||||||||||||||||| ||||    
T  53334544 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacatgtatctgataccgatacgcctcgatacgcgtatcggaaaagtatcggacaat 53334445  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||| |||||||||| ||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||    
T  53334444 taatatttatttttttgaaaaacaatgaccaatacgtgtcgaatacgtcccgatacgcgtatcagaaaagcatcgggcagttaatatttattttttgaag 53334345  T
Q  554 gnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    |        || |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||| |||| || ||||||    
T  53334344 gaaaaaaaatgtccgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactcggacacctatcaagtctggaagcgctaccaaaat 53334245  T
Q  653 catattgtctcttctaac--ctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactc 743  Q
    ||||||||||||||||||           || |||||||||||||||||||||||||||||||||| ||||       || |||||||||||||||||||    
T  53334244 catattgtctcttctaacaaaaaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattatcactgattgaattctactc 53334145  T
Q  744 tgtttctcgtctctctaatgttatgtttcttctgctgttt 783  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  53334144 tgtttctcttctctctaatgttatgtttcttctgctgttt 53334105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 356 - 783
Target Start/End: Complemental strand, 53338221 - 53337782
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | ||||||| |||||||||||||||||| ||||    
T  53338221 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacatgtatctgataccgatacgcctcgatacgcgtatcggaaaagtatcggacaat 53338122  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||| |||||||||| ||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||    
T  53338121 taatatttatttttttgaaaaacaatgaccaatacgtgtcgaatacgtcccgatacgcgtatcagaaaagcatcgggcagttaatatttattttttgaag 53338022  T
Q  554 gnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    |        || |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||| |||| || ||||||    
T  53338021 gaaaaaaaatgtccgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactcggacacctatcaagtctggaagcgctaccaaaat 53337922  T
Q  653 catattgtctcttctaac--ctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactc 743  Q
    ||||||||||||||||||           || |||||||||||||||||||||||||||||||||| ||||       || |||||||||||||||||||    
T  53337921 catattgtctcttctaacaaaaaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattatcactgattgaattctactc 53337822  T
Q  744 tgtttctcgtctctctaatgttatgtttcttctgctgttt 783  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  53337821 tgtttctcttctctctaatgttatgtttcttctgctgttt 53337782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 496 - 840
Target Start/End: Original strand, 42864321 - 42864669
Alignment:
Q  496 atacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgta 594  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||        || ||||||| ||||||||||||||||||||||    
T  42864321 atacgtcccgacacttgtatcggagaagtatcggacagttaatatttattttttgaaggaaaaaaaatgaccgatacatgtcggatacgactaacttgta 42864420  T
Q  595 ctccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtca 694  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||       || ||||||||||||    
T  42864421 ctccgacacagcttacttatactccgacacctatcaagtctggcagcgctatcaaaatcatattgtctcttctaacctaaaaaaatagggtttctcgtca 42864520  T
Q  695 ccacatagcaatagctattctcccttc-------taccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttt 787  Q
    |||||||||||||||||||||| ||||       ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  42864521 ccacatagcaatagctattctctcttctaaccattaccactaattgaattctactatgtttctcttctctctaatgttatgtttcttctgctgtttgttt 42864620  T
Q  788 tcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||||||| |||    ||||||||||||| ||||||| ||||||||||    
T  42864621 tcgatataaattactga----tgttaagtagtcaccattagacaaagatgttc 42864669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 731 - 839
Target Start/End: Original strand, 21869148 - 21869256
Alignment:
Q  731 ttgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagat 830  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||     
T  21869148 ttgaattctactatgtttctcttctctctaatgttatgtttcttctgctgtttgttttcaatataaattagtgttaactgttaagtagtcaacattagac 21869247  T
Q  831 aaagatgtt 839  Q
    |||||||||    
T  21869248 aaagatgtt 21869256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 356 - 431
Target Start/End: Original strand, 42864250 - 42864325
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacg 431  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  42864250 ctctgaagccccgaaactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgccccaatacg 42864325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 53363199 - 53363124
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacg 431  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |||||||||    
T  53363199 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacatgtatctgataccgatacaccccgatacg 53363124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 361 - 460
Target Start/End: Complemental strand, 27391411 - 27391312
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaata 460  Q
    ||||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||| |||| || || ||| ||   || ||||||||||||||||    
T  27391411 aagcccctatactccaaaaatggtgaagaatcgtgtctgacacgtatccgataccgatacatcccaatgcgcgtaccgatgaaatatcgggcaattaata 27391312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 363 - 460
Target Start/End: Original strand, 29359666 - 29359763
Alignment:
Q  363 gccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaata 460  Q
    ||||||||||| ||||||||  |||| ||||| ||| |||||||||||||||||||| ||| | ||||| ||||| || |||||||||||| ||||||    
T  29359666 gccccgatacttcaaaaatgacgaagaatcgtgtccaacacgtatccgataccgatatgtctcaatacgcgtatcagagaagtatcgggcatttaata 29359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 369 - 439
Target Start/End: Complemental strand, 24645699 - 24645629
Alignment:
Q  369 atactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcgg 439  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| ||||||| |||||||  |||||||    
T  24645699 atactccaaaaatggtgaagaatcgtgttcgacacgtatccgatactgatacgtaccgatactcgtatcgg 24645629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 22976673 - 22976519
Alignment:
Q  629 caagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta----- 723  Q
    ||||||| |||||| |||||||| ||||||||||||| |||||        || ||||||||||||||||||||| |||||||||  | ||||||         
T  22976673 caagtctagcagcgctatcaaaaacatattgtctcttttaacc-caaaaaatagggtttctcgtcaccacatagcgatagctatttcctcttctaaccat 22976575  T
Q  724 --ccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttctg 777  Q
      |||| |||||||||||||| |||||||  |||||||||||  ||||||||||||    
T  22976574 taccaccgattgaattctactatgtttcttttctctctaatgccatgtttcttctg 22976519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 778 - 839
Target Start/End: Complemental strand, 22976493 - 22976432
Alignment:
Q  778 ctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgtt 839  Q
    |||||| ||||||||||||||||||| || || ||||||||||||||||||| |||| ||||    
T  22976493 ctgtttattttcgatataaattagtgttaactattaagtagtcaacattagacaaaggtgtt 22976432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 419
Target Start/End: Complemental strand, 41530533 - 41530477
Alignment:
Q  363 gccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgata 419  Q
    |||| |||||| |||||||||||||| ||||| |||||||||||||||| |||||||    
T  41530533 gccctgatacttcaaaaatggtgaagaatcgtgtccgacacgtatccgacaccgata 41530477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 549
Target Start/End: Original strand, 29359730 - 29359773
Alignment:
Q  506 atacgcgtatcggagaagtatcggacagttaatatttatttttt 549  Q
    ||||||||||| |||||||||||| || ||||||||||||||||    
T  29359730 atacgcgtatcagagaagtatcgggcatttaatatttatttttt 29359773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 833
Target Start/End: Original strand, 29360074 - 29360129
Alignment:
Q  778 ctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaa 833  Q
    ||||||||||||||| |||||||||| || || | ||| |||||||||||||||||    
T  29360074 ctgtttgttttcgatctaaattagtgttaactatcaagcagtcaacattagataaa 29360129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 624
Target Start/End: Complemental strand, 22976792 - 22976735
Alignment:
Q  567 gatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacac 624  Q
    ||||||| ||||||||| |||||||||| ||||| || ||| ||| ||||||||||||    
T  22976792 gatacgtatcggatacggctaacttgtattccgatacgactaacttatactccgacac 22976735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 624
Target Start/End: Original strand, 29359788 - 29359845
Alignment:
Q  567 gatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacac 624  Q
    |||| |||||||||||| |||||||||||||||||||   | ||| ||||||||||||    
T  29359788 gatatgtgtcggatacggctaacttgtactccgacacgggtaacttatactccgacac 29359845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 744 - 777
Target Start/End: Original strand, 29360014 - 29360047
Alignment:
Q  744 tgtttctcgtctctctaatgttatgtttcttctg 777  Q
    |||||||| |||||||||||||||||||||||||    
T  29360014 tgtttctcttctctctaatgttatgtttcttctg 29360047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 361 - 840
Target Start/End: Complemental strand, 38223 - 37725
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------tcccgatacgggtatcggaaaagtatcgg 450  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||          |||||||||||||||| ||||||||||||    
T  38223 aagccccgatactccaaaaatgatgaagtatcgtatccgacacgtatctgataccgatacgccccgatacgtcccgatacgggtatcagaaaagtatcgg 38124  T
Q  451 gcaattaatannnnnnnnngaaaaa--caatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttt 548  Q
    ||||||||||          |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38123 gcaattaatatttatttcttaaaaaaacaatgaccgatacgtgtcggatacgtcccaatacgcgtatcggagaagtatcggacagttaatatttattttt 38024  T
Q  549 tgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatca 648  Q
    ||||||       || |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  38023 tgaaggaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccaacacagcttacttatactccgacacttatcaagtctggcagcgctatca 37924  T
Q  649 aaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctac 741  Q
    ||||||||||||||||| ||||||       || ||||||||||||||||||||||||||||||| || ||||       |||| |||||||||||||||    
T  37923 aaatcatattgtctcttttaacctaaaaaaatagggtttctcgtcaccacatagcaatagctattttctcttctaaccattaccgctgattgaattctac 37824  T
Q  742 tctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||    
T  37823 tctgtttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaatttgtgttaactgttaagtagtcaacattagacaaagatgttc 37725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 356 - 840
Target Start/End: Complemental strand, 19928419 - 19927928
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaa---gtatcgggc 452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    |||   | |   |||||||||    
T  19928419 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgctccgatac----atcccgatacgggtatcgggc 19928324  T
Q  453 aattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttg 550  Q
    ||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19928323 aattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcagacagttaatatttattttttg 19928224  T
Q  551 aaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaa 649  Q
    ||||        || ||||||||||| | |||||||||||||||||||||||||| |||||| ||||   ||||||||||||||||||||||| ||||||    
T  19928223 aaggaaaaaaaatgaccgatacgtgttgaatacgactaacttgtactccgacacagcttacttataccttgacacttatcaagtctggcagcgctatcaa 19928124  T
Q  650 aatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctact 742  Q
    |||||||  ||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||    
T  19928123 aatcata--gtctcttctaacctaaaaaaatatggtttctcgtcaccacatagcaatagctattctctcttctaaccattaccactgattgaattctact 19928026  T
Q  743 ctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19928025 ctgtttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgataactgttaagtagtcaacattagataaagatgttc 19927928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 355 - 840
Target Start/End: Original strand, 30947455 - 30947962
Alignment:
Q  355 tctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacg----------ggtatcggaaaag 444  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||          ||||||| |||||    
T  30947455 tctctgaagccccgatactacaaaaatggtgaagtatcgtatccgacacgtattcgataccgatacgccccgatacgttccgatacgggtatcgaaaaag 30947554  T
Q  445 tatcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatattt 542  Q
    ||||||||||||||||           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  30947555 tatcgggcaattaatatttatttttttgaaaaacaatgactgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcagacaattaatattt 30947654  T
Q  543 attttttgaaggnnnnnnntggccgatacgtgtcggatacgactaact----tgtactccgacacaacttactcatactccgacacttatcaagtctggc 638  Q
    ||||||||||||       || | ||||||||||||||||||||||||    |||||||||||||| |||||| |||||||||||| |||||||||||||    
T  30947655 attttttgaaggaaaaaaatgactgatacgtgtcggatacgactaactaacttgtactccgacacagcttacttatactccgacacctatcaagtctggc 30947754  T
Q  639 agcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgat 731  Q
    |||| |||||||||||||||||||||||||| ||       || |||||||||||||||||||||||||||||||||| ||||||       |||| |||    
T  30947755 agcgctatcaaaatcatattgtctcttctaatctaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattaccaccgat 30947854  T
Q  732 tgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagata 831  Q
    ||||||||||| |||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||||| |    
T  30947855 tgaattctactatgtttctcttctctcga-tgttatgtttcttctgccgtttgttttcgatataaattagtgttaactgttaaatagtcaacattagaca 30947953  T
Q  832 aagatgttc 840  Q
    |||||||||    
T  30947954 aagatgttc 30947962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 356 - 840
Target Start/End: Original strand, 25443519 - 25444001
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| |||||    
T  25443519 ctctgaagccctgatactcaaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------ggtatcggaaaagtatcgagcaat 25443608  T
Q  456 taatannnnnnnnn---gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaa 552  Q
    |||||            | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25443609 taatatttattttttttgtaaaacaatgaccgatacgtgtcagatacatcccgatacgcgtatcggagaagtatcggacaattaatatttattttttgaa 25443708  T
Q  553 ggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    ||       || |||||||||||||||||| | ||||||||||||| ||||| |||||| ||| |||||||| ||||||||||||||||| |||||||||    
T  25443709 ggaaaaaa-tgaccgatacgtgtcggatacaattaacttgtactcc-acacatcttacttatattccgacacctatcaagtctggcagcgctatcaaaat 25443806  T
Q  653 catattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctactctg 745  Q
    |||||||| |||||||||||        | |||||||| |||||||||| ||||||||||||||  |||||       |||| |||||||||||||||||    
T  25443807 catattgtttcttctaacctaaaaaataagggtttctcatcaccacatatcaatagctattctcttttctaaccattaccacagattgaattctactctg 25443906  T
Q  746 tttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  25443907 tttctcttctctctaatgttatgtttcttctgctatttgttttcgatataaattagtgttaactgttaagtagtcaacattagacaaagatgttc 25444001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 356 - 655
Target Start/End: Complemental strand, 40820069 - 40819769
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  40820069 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatgcgataccgatacgtcccgatacgggtatcggaaaagtatcgggaaat 40819970  T
Q  456 taata--nnnnnnnnngaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40819969 taatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaa- 40819871  T
Q  554 gnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatc 653  Q
    |       || |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40819870 gaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccaacacagcttacttatactccgacacttatcaagtctggcagcgctatcaaaatc 40819771  T
Q  654 at 655  Q
    ||    
T  40819770 at 40819769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 356 - 630
Target Start/End: Complemental strand, 37245443 - 37245166
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  37245443 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatctgataccgatacgtcctgatacgggtatcggaaaagtatcgggcaat 37245344  T
Q  456 taa--tannnnnnnnngaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||  |          |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  37245343 taatgtttatttttttgaaaaacaatgaccgatacgtgtcagatacgtcgcgatacgcgtatcggaaaagtatcagacaattaatatttattttttgaag 37245244  T
Q  554 g-nnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatca 630  Q
    |        || |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  37245243 gaaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactccgacacctatca 37245166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 684 - 840
Target Start/End: Complemental strand, 40819768 - 40819605
Alignment:
Q  684 gtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttct 776  Q
    ||||||||||||||||||||||||||||||||| ||||||       ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  40819768 gtttctcgtcaccacatagcaatagctattctctcttctaaccattaccacttattgaattctactctgtttctcttctctctaatgttatgtttcttct 40819669  T
Q  777 gctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  40819668 gctgtttgttttcgatataaattagtgataacagttaagtagtcaacattagataaagatgttc 40819605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 685 - 840
Target Start/End: Complemental strand, 26279781 - 26279619
Alignment:
Q  685 tttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttctg 777  Q
    ||||||||||||||||| |||||||||||||| ||||||       |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26279781 tttctcgtcaccacataacaatagctattctctcttctaaccattaccactgattgaattctactctgtttctcttctctctaatgttatgtttcttctg 26279682  T
Q  778 ctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||| || ||||||||||    
T  26279681 ctgtttgttttcgatataaattaatgttaactgttaagtagtcaacattggacaaagatgttc 26279619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 356 - 547
Target Start/End: Complemental strand, 26279982 - 26279779
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgata----------cgtcccgatacgggtatcggaaaagt 445  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||          |||||||||||  |||||||||||||    
T  26279982 ctctgaagccccgatactctaaaaatggtgaagtatcgtatccgacacgtatcagataccgatatgctccgatacgtcccgatacacgtatcggaaaagt 26279883  T
Q  446 atcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatattta 543  Q
    |||||||||||||||           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  26279882 atcgggcaattaatatttatttttttgaaaaacaatgactgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcgggaagttaatattta 26279783  T
Q  544 tttt 547  Q
    ||||    
T  26279782 tttt 26279779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 356 - 460
Target Start/End: Complemental strand, 22205469 - 22205365
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  22205469 ctctaaagccccgatactccaaaaatggtgaagaatcgtgtccgatacgtatccgataccgatacgttccgatacgcgtatcggaaaagtatcgggcaat 22205370  T
Q  456 taata 460  Q
    |||||    
T  22205369 taata 22205365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 356 - 460
Target Start/End: Original strand, 22229270 - 22229374
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  22229270 ctctaaagccccgatactccaaaaatggtgaagaatcgtgtccgatacgtatccgataccgatacgttccgatacgcgtatcggaaaagtatcgggcaat 22229369  T
Q  456 taata 460  Q
    |||||    
T  22229370 taata 22229374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 626 - 716
Target Start/End: Complemental strand, 37243094 - 37243004
Alignment:
Q  626 tatcaagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctc 716  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||       || ||||||||||||||||||||||||| ||||||||    
T  37243094 tatcaagtctggcagcgctatcaaaatcatattgtctcttctaacctaaaaaaatagggtttctcgtcaccacatagcaataactattctc 37243004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 356 - 458
Target Start/End: Original strand, 36281520 - 36281622
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||| ||||||||||||||||||  |||| ||||| || |||| ||||| ||||| |||||||||||||||| ||||  || |||||||||| |||    
T  36281520 ctcttaagtcccgatactccaaaaatgacgaagaatcgtgtctgacatgtatctgatactgatacgtcccgatacgcgtataagagaagtatcgggtaat 36281619  T
Q  456 taa 458  Q
    |||    
T  36281620 taa 36281622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 367 - 460
Target Start/End: Original strand, 45280678 - 45280771
Alignment:
Q  367 cgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaata 460  Q
    ||||||| |||||||||||| | ||| | ||||||| ||||| ||||||  |||||||||||||| |||| ||| ||||||||| |||||||||    
T  45280678 cgatacttcaaaaatggtgatgaatcctgtccgacatgtatctgataccattacgtcccgatacgcgtattggagaagtatcggtcaattaata 45280771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 626
Target Start/End: Original strand, 45280729 - 45280859
Alignment:
Q  497 tacgtcccgatacgcgtatcggagaagtatcggacagttaatattta-ttttttgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgtac 595  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||          |  |||||||||||| ||||||||||||||||||    
T  45280729 tacgtcccgatacgcgtattggagaagtatcggtcaattaatatttatttttttgagaaaaaaaaattaccgatacgtgtcagatacgactaacttgtac 45280828  T
Q  596 tccgacacaacttactcatactccgacactt 626  Q
    || |||||  || ||| ||||||||| ||||    
T  45280829 tctgacacggctaacttatactccgatactt 45280859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 36630337 - 36630436
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaata 460  Q
    ||||| ||||||| ||||| ||| |||| ||||||||| |  ||||||||| || |||| ||||||||||| |||||||| ||||||| | |||||||||    
T  36630337 aagcctcgatacttcaaaattggcgaagaatcgtatccaatgcgtatccgacactgatatgtcccgatacgtgtatcggagaagtatctgacaattaata 36630436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 15043355 - 15043301
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttatttttt 549  Q
    |||||||||||||||| ||||||| |||||||||| || ||||||||||||||||    
T  15043355 gatacgtcccgatacgtgtatcggtgaagtatcggccaattaatatttatttttt 15043301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 26279912 - 26279858
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttatttttt 549  Q
    ||||||||||||||| ||||||||| ||||||||| || ||||||||||||||||    
T  26279912 gatacgtcccgatacacgtatcggaaaagtatcgggcaattaatatttatttttt 26279858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 549
Target Start/End: Original strand, 36630392 - 36630446
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttatttttt 549  Q
    |||| ||||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  36630392 gatatgtcccgatacgtgtatcggagaagtatctgacaattaatatttatttttt 36630446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 15043364 - 15043311
Alignment:
Q  407 tccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaata 460  Q
    ||||||||||||||||||||||||| |||||||  ||||||||| |||||||||    
T  15043364 tccgataccgatacgtcccgatacgtgtatcggtgaagtatcggccaattaata 15043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 22205409 - 22205352
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaa 552  Q
    ||||||| ||||||||||||||||| ||||||||| || ||||||||  |||||||||    
T  22205409 gatacgttccgatacgcgtatcggaaaagtatcgggcaattaatattatttttttgaa 22205352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 22229330 - 22229387
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaa 552  Q
    ||||||| ||||||||||||||||| ||||||||| || ||||||||  |||||||||    
T  22229330 gatacgttccgatacgcgtatcggaaaagtatcgggcaattaatattatttttttgaa 22229387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 829
Target Start/End: Complemental strand, 22205059 - 22205008
Alignment:
Q  778 ctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattaga 829  Q
    |||||| ||||||||||||||||||| || || ||| |||||||||||||||    
T  22205059 ctgtttcttttcgatataaattagtgttaactattaggtagtcaacattaga 22205008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 829
Target Start/End: Original strand, 22229680 - 22229731
Alignment:
Q  778 ctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattaga 829  Q
    |||||| ||||||||||||||||||| || || ||| |||||||||||||||    
T  22229680 ctgtttcttttcgatataaattagtgttaactattaggtagtcaacattaga 22229731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 779 - 829
Target Start/End: Original strand, 22293205 - 22293255
Alignment:
Q  779 tgtttgttttcgatataaattagtgatagctgttaagtagtcaacattaga 829  Q
    |||||||||| ||| |||||||||| || || |||||||||||||||||||    
T  22293205 tgtttgtttttgatctaaattagtgttaactattaagtagtcaacattaga 22293255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 25556691 - 25556745
Alignment:
Q  404 gtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaa 458  Q
    ||||| ||||||||||||||| |||||| ||||| || |||||||||| ||||||    
T  25556691 gtatctgataccgatacgtcctgatacgtgtatcagagaagtatcgggtaattaa 25556745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 257; Significance: 1e-142; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 355 - 839
Target Start/End: Original strand, 21111998 - 21112490
Alignment:
Q  355 tctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------tcccgatacgggtatcggaaaag 444  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||          |||||||||||||||||||||||    
T  21111998 tctctaaagtcccgatactccaaaaatggtgaagtatcgtatccgatacgtatcggatatcgatacgcctcgatatgtcccgatacgggtatcggaaaag 21112097  T
Q  445 tatcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatattt 542  Q
    ||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||    
T  21112098 tatcgggcaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcgga-----------cagttaatattt 21112186  T
Q  543 attttttgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcg 642  Q
    ||||||||||||       || | ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  21112187 attttttgaaggaaaaaaatgactgatacgtgtcggatacgactaacttgtactccgacacaacttacttatactctgacacctatcaagtctggcagcg 21112286  T
Q  643 gtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaa 735  Q
     |||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||| ||||       ||||||||||||||    
T  21112287 ctatcaaaatcatattgtctcttctaacctaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattaccactgattgaa 21112386  T
Q  736 ttctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaaga 835  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||||    
T  21112387 ttctactctgtttctcttctctctaatgttatgtttcttctgctgtttgtttttgatataaattagtgttaactgttaagtagtcaacattagacaaaga 21112486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 356 - 840
Target Start/End: Original strand, 8861950 - 8862433
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  8861950 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgccccaatacgggtatcggaaaaatatcgggcaat 8862049  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||||||||||           ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8862050 taatatttatttttttgaaaaacaatgaccgatacgt-----------cccgatacgcgtatcggagaagtatcggatagttaatatttattttttgaag 8862138  T
Q  554 gnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    |        |   |||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||| |||||||||| |||||| |||||||||    
T  8862139 gaaaaaaaataatcgatacgtgtcggatacgactaacttatactccgacacagcttacttatactccgacacctatcaagtctagcagcgctatcaaaat 8862238  T
Q  653 catattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactctg 745  Q
    ||||||||||||||||||||       || |||||||||||||| ||||||||||||||||||| ||||       ||||||||||||||||||||||||    
T  8862239 catattgtctcttctaacctaaaaaaatagggtttctcgtcaccgcatagcaatagctattctctcttctaaccattaccactgattgaattctactctg 8862338  T
Q  746 tttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  8862339 tttctcttctctataatgttatgtttcttctactgtttgttttcgatataaattagtgataactgttaagtggtcaacattagacaaagatgttc 8862433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 356 - 666
Target Start/End: Original strand, 11382414 - 11382737
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------tcccgatacgggtatcggaaaagt 445  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||          |||||||||||||||| |||||||    
T  11382414 ctctaaagtcccgatactccaaaaatggtgaagtatcgtatcagacacgtatccgatatcgatacgccccgatacatcccgatacgggtatcagaaaagt 11382513  T
Q  446 atcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatattta 543  Q
    ||||| |||||||||           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11382514 atcggacaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcgaagaagtatcggacaattaatattta 11382613  T
Q  544 ttttttgaagg-nnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcg 642  Q
    |||||||||||        ||  ||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||| |||||    
T  11382614 ttttttgaaggaaaaaaaatgagcgatacgtgtcggatacgactaacttgtactccgacagagcttacttatactccgacacctatcaagtctgacagcg 11382713  T
Q  643 gtatcaaaatcatattgtctcttc 666  Q
     |||||||||||||||||||||||    
T  11382714 ctatcaaaatcatattgtctcttc 11382737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 257; Significance: 1e-142; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 355 - 840
Target Start/End: Original strand, 14811174 - 14811679
Alignment:
Q  355 tctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------tcccgatacgggtatcggaaaag 444  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||    
T  14811174 tctctgaagccccgacacttcaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgccccgatacgtcccgatacgcgtatcggaaaag 14811273  T
Q  445 tatcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatattt 542  Q
    ||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  14811274 tatcgggcaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgtgtatcggagaaatatcggacaattaatattt 14811373  T
Q  543 attttttgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagc 641  Q
    ||||||||||||        || |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||    
T  14811374 attttttgaaggaaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactccgacacctattaagtctggcagc 14811473  T
Q  642 ggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattga 734  Q
      ||| |||||||||||||||||||||||||       || | |||||||||||||||||||||||||||||||| ||||||       |||||||||||    
T  14811474 actattaaaatcatattgtctcttctaacctaaaaaaataggatttctcgtcaccacatagcaatagctattctctcttctaaccattaccactgattga 14811573  T
Q  735 attctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaag 834  Q
    |||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  14811574 attctactctatttctcttctctctaatgttatgtttcttctattgtttgttttcgatataaattagtgttaactgttaagtagtcaacattagacaaag 14811673  T
Q  835 atgttc 840  Q
    ||||||    
T  14811674 atgttc 14811679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 355 - 840
Target Start/End: Complemental strand, 14314562 - 14314062
Alignment:
Q  355 tctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------tcccgatacgggtatcggaaaag 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||    
T  14314562 tctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgccccgatacgtcccgatacgcgtatcggaaaag 14314463  T
Q  445 tatcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatattt 542  Q
    ||||||||||||||||           |||||||||||||||||||||||||||||||          ||||||||||||||||||| || |||||||||    
T  14314462 tatcgggcaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacg----------cgtatcggagaagtatcgggcaattaatattt 14314373  T
Q  543 attttttgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcg 642  Q
    ||||||||||||       || |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||| ||||||||||||| |||    
T  14314372 attttttgaaggaaaaaaatgaccgatacgtgtcggatacgactaacttgcactccgacacagcttacttatactccaacacctatcaagtctggctgcg 14314273  T
Q  643 gtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagc-------tattctcccttc-------taccact 728  Q
     |||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||       ||||||| ||||       ||||  |    
T  14314272 ctatcaaaatcatattgtctcttctaacctaaaaaaatagggtttctcgtcaccacatagcaatagccaatagttattctctcttctaaccattaccggt 14314173  T
Q  729 gattgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattag 828  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  14314172 gattgaattctactttgtttctcttctctctaatgttatgtttctt-tgctgtttgttttcgatataaattagtgttaactgttaagtagtcaacattag 14314074  T
Q  829 ataaagatgttc 840  Q
    | ||| ||||||    
T  14314073 acaaaaatgttc 14314062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 356 - 458
Target Start/End: Complemental strand, 32751174 - 32751072
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||| ||||  || ||||||| || |||    
T  32751174 ctctgaagctccgatactccaaaaatggtgaagaattatatccgacacgtatccgataccgatacgtcccaatacgtgtattagagaagtatcaggtaat 32751075  T
Q  456 taa 458  Q
    |||    
T  32751074 taa 32751072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 27709996 - 27709936
Alignment:
Q  362 agccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgt 422  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  27709996 agccccgatactccaaaaatggtgaagaatcgtgtctgacacgtatccgataccgatacgt 27709936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 777
Target Start/End: Complemental strand, 13043666 - 13043622
Alignment:
Q  733 gaattctactctgtttctcgtctctctaatgttatgtttcttctg 777  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  13043666 gaattctactatgtttctcttctctctaatgttatgtttcttctg 13043622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 356 - 840
Target Start/End: Original strand, 29054462 - 29054966
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgatac---------cgatacgtcccgatacgggtatcggaaaagta 446  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  29054462 ctctcaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgatacgatacgcctcgatacgtcccgatacgggtatcggaaaagta 29054561  T
Q  447 tcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttat 544  Q
    ||||||||||||||           ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  29054562 tcgggcaattaatatttatttttttgaaaaacaatgactgatacgtgtcggatacgtcccgatacgcgtattggtgaagtatcagacagttaatatttat 29054661  T
Q  545 tttttgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcgg 643  Q
    || |||||||        || || ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||||     
T  29054662 ttattgaaggaaaaaaaatgacctatacgtgtcggatacgactaacttgtactccgacacagcttacttatactccaacacctatcaagtttggcagcgt 29054761  T
Q  644 tatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaa--tagctattctcccttcta-------ccactgattga 734  Q
    |||||||||||||||||||||||||||||       || |||||||||||||||||||||||  ||||||||||| ||||||       |||||||||||    
T  29054762 tatcaaaatcatattgtctcttctaacctaaaaaa-tagggtttctcgtcaccacatagcaaaatagctattctctcttctaaccattaccactgattga 29054860  T
Q  735 attctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaag 834  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| ||||    
T  29054861 attctactatgtttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgttaacggttaagtagtcaacattagacaaag 29054960  T
Q  835 atgttc 840  Q
    ||||||    
T  29054961 atgttc 29054966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 356 - 840
Target Start/End: Complemental strand, 17631317 - 17630837
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||| || |||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17631317 ctctgaagccccgatgctacaaaaatggtg---tatcttatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcaggcaat 17631221  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||||||||||||| |||||||||||||||| ||||||||           |||||||||||||||||||||||    
T  17631220 taatatttatttttttgaaaaacaatgaccgatacgtgtcagatacgtcccgatacgtgtatcgga-----------cagttaatatttattttttgaag 17631132  T
Q  554 gnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaat 652  Q
    |        || |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| || |||||||||    
T  17631131 gaaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactccgacacctatcaagtctggcaacgctatcaaaat 17631032  T
Q  653 catattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactctg 745  Q
    ||||||||||||||||||||       || ||||||||||||||| |||||||||||||||||| ||||       ||||||||||||||||||||||||    
T  17631031 catattgtctcttctaacctaaaaaaatagggtttctcgtcaccaaatagcaatagctattctctcttctaaccattaccactgattgaattctactctg 17630932  T
Q  746 tttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| || |||||||||||||||||||||| ||| ||||||    
T  17630931 tttctcttctctctaatgttatgtttattctgctgttagttttcgatataaattagtgttaactgttaagtagtcaacattagacaaatatgttc 17630837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 356 - 750
Target Start/End: Complemental strand, 10861952 - 10861549
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  10861952 ctctgaagccccgatactccaaaaatggtgaagtatcgtaaccgacacatatccgataccgatacattccgatacgggtatcggaaaagtattgggcaat 10861853  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10861852 taatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtgccgatacgcgtatcggagaagtatcggacaattaatatttattttttgaag 10861753  T
Q  554 gnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatc 653  Q
    |       || |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||| | ||||||||    
T  10861752 gaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccgacacagcttacttatactccgacacctatcaggtctggcagcgctctcaaaatc 10861653  T
Q  654 atattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactctgt 746  Q
    ||||| |||||||||||||       || |||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||| |||    
T  10861652 atattctctcttctaacctaaaaatatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattaccactgattgaattctactatgt 10861553  T
Q  747 ttct 750  Q
    ||||    
T  10861552 ttct 10861549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 361 - 840
Target Start/End: Original strand, 17068100 - 17068578
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgatacc----------gatacgtcccgatacgggtatcggaaaagtatcgg 450  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||| |||||||||||||||||||    
T  17068100 aagccccgatactccaaaaatggtgaagtatcgtatctgacacgtatccgataccaatacgcctcgatacgtcccgatacaggtatcggaaaagtatcgg 17068199  T
Q  451 gcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttt 548  Q
    ||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17068200 gcaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcgaacagttaatatttattttt 17068299  T
Q  549 tgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatc 647  Q
    ||||||        || |||||||||||||||| ||||||||||||||                     |||||||| |||||||||| |||||| ||||    
T  17068300 tgaaggaaaaaaaatgaccgatacgtgtcggatgcgactaacttgtac---------------------tccgacacctatcaagtctcgcagcgctatc 17068378  T
Q  648 aaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattcta 740  Q
    ||||||||||| |||||||||||||       || |||||||||||||||||||||||||||||||||| ||||||       |||||||||||||| ||    
T  17068379 aaaatcatattatctcttctaacctaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattaccactgattgaatttta 17068478  T
Q  741 ctctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  17068479 ctctgtttctcttctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgttaactgttaagtagtcaacattagacaaagatgttc 17068578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 503 - 840
Target Start/End: Original strand, 21076028 - 21076373
Alignment:
Q  503 ccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgac 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||        || |||||||||||||||||||||||||||||||||||||    
T  21076028 ccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggaaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccgac 21076127  T
Q  602 acaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacata 701  Q
    ||| |||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||       || |||||||||||||||||||    
T  21076128 acagcttacttatactccgacacctatcaagtctggcagcgctatcaaaatcatattgtcttttctaacctaaaaaaatagggtttctcgtcaccacata 21076227  T
Q  702 gcaatagctattctcccttc-------taccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatat 794  Q
    ||||||||||||||| ||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  21076228 gcaatagctattctctcttctaaccattaccactgattgaattctactctgtttctcttctctctaatgttatgtttcttatgttgtttgttttcgatat 21076327  T
Q  795 aaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||| || | |||||||| | ||||||||| ||||||||||    
T  21076328 aaattagtgttaaccgttaagtaattaacattagacaaagatgttc 21076373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 503 - 840
Target Start/End: Original strand, 20289398 - 20289743
Alignment:
Q  503 ccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgac 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||        || |||||||||||||||||||||||||||||||||||||    
T  20289398 ccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggaaaaaaaatgaccgatacgtgtcggatacgactaacttgtactccgac 20289497  T
Q  602 acaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacata 701  Q
    ||| |||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||       || |||||||||||||||||||    
T  20289498 acagcttacttatactccgacacctatcaagtctggcagcgctatcaaaatcatattgtcttttctaacctaaaaaaatagggtttctcgtcaccacata 20289597  T
Q  702 gcaatagctattctcccttc-------taccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatat 794  Q
    ||||||||||||||| ||||       || |||| |||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  20289598 gcaatagctattctctcttctaaccattaacactaattgaattctactctgtttctcttctctctaatgttatgtttcttatgttgtttgttttcgatat 20289697  T
Q  795 aaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||| || | |||||||| | ||||||||| ||||||||||    
T  20289698 aaattagtgttaaccgttaagtaattaacattagacaaagatgttc 20289743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 414 - 840
Target Start/End: Complemental strand, 34964844 - 34964423
Alignment:
Q  414 ccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgc 511  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||    ||||||| ||    
T  34964844 ccgatacgttccgatacgggtatcggaaaagtatcgggcaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggat----cccgatatgc 34964749  T
Q  512 gtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttac 610  Q
    |||||||||||||||||||  ||||||||||||||||||||||        || |||||| ||||||||||||||||||||||||||||||||| |||||    
T  34964748 gtatcggagaagtatcggatggttaatatttattttttgaaggaaaaaaaatgaccgatatgtgtcggatacgactaacttgtactccgacacagcttac 34964649  T
Q  611 tcatactccgacacttatcaagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagct 710  Q
    | |||||||||||| |||||||| |||||||| ||||||           ||||||||||||       || |||||||||||||| |||||||||||||    
T  34964648 ttatactccgacacctatcaagtttggcagcgctatcaa-----------ctcttctaacctaaaaaaatagggtttctcgtcaccgcatagcaatagct 34964560  T
Q  711 attctcccttcta-------ccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtg 803  Q
    |||||| ||||||       ||  ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34964559 attctctcttctaaccattacctttgattgaattctactatgtttctcttctctctaatgttatgtttattctgctgtttgttttcgatgtaaattagtg 34964460  T
Q  804 atagctgttaagtagtcaacattagataaagatgttc 840  Q
     || |||||||||||||||||||||| ||||||||||    
T  34964459 ttaactgttaagtagtcaacattagacaaagatgttc 34964423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 470 - 840
Target Start/End: Complemental strand, 17580052 - 17579695
Alignment:
Q  470 gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnn-tggccga 568  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        || ||||    
T  17580052 gaaaaaaaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcgaacagttaatatttattttttgaaggaaaaaaaatgaccga 17579953  T
Q  569 tacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatcatattgtctcttcta 668  Q
    |||||||||||| ||||||||||||||                     |||||||| |||||||||| |||||| ||||||||||||||| |||||||||    
T  17579952 tacgtgtcggatgcgactaacttgtac---------------------tccgacacctatcaagtctcgcagcgctatcaaaatcatattatctcttcta 17579874  T
Q  669 acctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctactctgtttctcgtctctctaa 761  Q
    ||||       || |||||||||||||||||||||||||||||||||| ||||||       |||||||||||||| ||||||||||||| |||||||||    
T  17579873 acctaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttctaaccattaccactgattgaattttactctgtttctcttctctctaa 17579774  T
Q  762 tgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  17579773 tgttatgtttcttctgctgtttgttttcgatataaattagtgttaactgttaagtagtcaacattagacaaagatgttc 17579695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 361 - 554
Target Start/End: Complemental strand, 17580257 - 17580052
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgatacc----------gatacgtcccgatacgggtatcggaaaagtatcgg 450  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||| |||||||||||||||||||    
T  17580257 aagccccgatactccaaaaatggtgaagtatcgtatctgacacgtatccgataccaatacgcctcgatacgtcccgatacaggtatcggaaaagtatcgg 17580158  T
Q  451 gcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttt 548  Q
    ||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17580157 gcaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcgaacagttaatatttattttt 17580058  T
Q  549 tgaagg 554  Q
    ||||||    
T  17580057 tgaagg 17580052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 356 - 460
Target Start/End: Original strand, 20289270 - 20289374
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  20289270 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatcggataccgatacgtcccgatacggctatcggaaaagtatcgggcaat 20289369  T
Q  456 taata 460  Q
    |||||    
T  20289370 taata 20289374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 356 - 460
Target Start/End: Original strand, 21075900 - 21076004
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  21075900 ctctgaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatcggataccgatacgtcccgatacggctatcggaaaagtatcgggcaat 21075999  T
Q  456 taata 460  Q
    |||||    
T  21076000 taata 21076004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 10786939 - 10786861
Alignment:
Q  353 attctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacg 431  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  10786939 attctctcaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgagacgccccaatacg 10786861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 765 - 840
Target Start/End: Complemental strand, 10861557 - 10861482
Alignment:
Q  765 tatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||    
T  10861557 tatgtttcttctgctgtttgttttcgatataaattagtgttaactattaagtagtcaacattagacaaagatgttc 10861482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 460
Target Start/End: Complemental strand, 3046942 - 3046840
Alignment:
Q  357 tctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaatt 456  Q
    ||||||||||| ||| |   |||||||||||| ||| | ||||||||||||  ||||| |||||||||||||||| |||||||| |||||| ||||||||    
T  3046942 tctaaagccccaatatttttaaaatggtgaagaatcatgtccgacacgtat-tgatactgatacgtcccgatacgtgtatcggagaagtattgggcaatt 3046844  T
Q  457 aata 460  Q
    ||||    
T  3046843 aata 3046840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 3046884 - 3046830
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttatttttt 549  Q
    |||||||||||||||| ||||||||||||||| || || ||||||||||||||||    
T  3046884 gatacgtcccgatacgtgtatcggagaagtattgggcaattaatatttatttttt 3046830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 549
Target Start/End: Original strand, 20289330 - 20289384
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttatttttt 549  Q
    ||||||||||||||||  ||||||| ||||||||| || ||||||||||||||||    
T  20289330 gatacgtcccgatacggctatcggaaaagtatcgggcaattaatatttatttttt 20289384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 549
Target Start/End: Original strand, 21075960 - 21076014
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttatttttt 549  Q
    ||||||||||||||||  ||||||| ||||||||| || ||||||||||||||||    
T  21075960 gatacgtcccgatacggctatcggaaaagtatcgggcaattaatatttatttttt 21076014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 779 - 839
Target Start/End: Complemental strand, 3046507 - 3046447
Alignment:
Q  779 tgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgtt 839  Q
    |||||||||| |||||||||||||| ||  | ||||||||||||||||||| |||| ||||    
T  3046507 tgtttgtttttgatataaattagtgttaaatattaagtagtcaacattagacaaaggtgtt 3046447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 723
Target Start/End: Complemental strand, 3046688 - 3046595
Alignment:
Q  630 aagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta 723  Q
    |||| |||||||| |||||||| |||||||||||||||||||        || ||||||||||||||||||| | ||| |||||| | ||||||    
T  3046688 aagtttggcagcgctatcaaaaacatattgtctcttctaacccaaaaaaatagggtttctcgtcaccacataacgataactattccctcttcta 3046595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 624
Target Start/End: Complemental strand, 3046816 - 3046757
Alignment:
Q  565 ccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacac 624  Q
    |||||||||||| |||||  |||||||||||||||||||| || | | ||||||||||||    
T  3046816 ccgatacgtgtctgatacagctaacttgtactccgacacagctaatttatactccgacac 3046757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 17048179 - 17048238
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatac 420  Q
    ||||| |||||||| ||||||||||||||||||| ||||| | | | |||||||||||||    
T  17048179 aagcctcgatactctaaaaatggtgaagtatcgtgtccgataagcacccgataccgatac 17048238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 213; Significance: 1e-116; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 484 - 840
Target Start/End: Original strand, 8871283 - 8871647
Alignment:
Q  484 gatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnn-tggccgatacgtgtcggatac 582  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||        || ||||||||||||||||||    
T  8871283 gatacgtgtcgggcacgtcccgatacgcgtatcagagaagtatcggacaattaatatttattttttgaaggaaaaaaaatgaccgatacgtgtcggatac 8871382  T
Q  583 gactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntat 682  Q
    |||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||       ||     
T  8871383 gactaacttgtactccgacacatcttagttatactccgacacctatcaagtctggcagcgctatcaaaatcatattgtctcttctaacctaaaaaaatag 8871482  T
Q  683 ggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttc 775  Q
    |||||||||||||||||||||||||||||||||| ||||       ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  8871483 ggtttctcgtcaccacatagcaatagctattctctcttctaaccattaccactaattgaattctactatgtttctcttctctctaatgttatgtttcttc 8871582  T
Q  776 tgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||| ||| ||||||    
T  8871583 tgctgtttgttttcgatataaattagtgttaactgttaagtagtcaacattagacaaaaatgttc 8871647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 356 - 723
Target Start/End: Original strand, 36606086 - 36606454
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| || |||    
T  36606086 ctctcaagccccaatattccaaaaatggtgaagtatcgtatcctacacgtatccgatatcgatacgtcccgatacgggtatcggaaaaatatcaggaaat 36606185  T
Q  456 taatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||||           ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||    
T  36606186 taatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatatgcgtgtcggagaagtatcggacaattaatatttatttttttaag 36606285  T
Q  554 gnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatc 653  Q
    |       || |||| ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||||||| ||||||||||    
T  36606286 gaaaaaa-tgaccgacacgtgtcggatacgactaacttgtactccgacacagcttacttatactctgacacctatcaagtctggcagcgctatcaaaatc 36606384  T
Q  654 atattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta 723  Q
    |||||||||||||||||||       || |||||||||||||||||||||||||||||||||| ||||||    
T  36606385 atattgtctcttctaacctaaaaaaatagggtttctcgtcaccacatagcaatagctattctctcttcta 36606454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 567 - 840
Target Start/End: Complemental strand, 13854648 - 13854368
Alignment:
Q  567 gatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatcaaaatcatattgtctcttc 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |    
T  13854648 gatacgtgtcggatacgactaacttgtactccgacacaacttacttatactccgacacctatcaagtctggcagcgctatcaaaatcatattgtctctcc 13854549  T
Q  667 taacctnnnnnnn-tatggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctactctgtttctcgtctctc 758  Q
    ||||||        || ||||||||||||||||||||||||| ||||| || ||||||       |||||||||||||||||||||||||||| ||||||    
T  13854548 taacctaaaaaaaatagggtttctcgtcaccacatagcaataactattatctcttctaaccattaccactgattgaattctactctgtttctcttctctc 13854449  T
Q  759 taatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  13854448 taatgttatgtttcttctgctatttg-tttcgatataaattagtgttaactgttaagtagtcaacattagacaaagatgttc 13854368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 431
Target Start/End: Original strand, 6665622 - 6665697
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacg 431  Q
    |||| ||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||    
T  6665622 ctctgaagccccgatactccgaaaatggtgaaggatcgtgtccgacacgtattcgataccgatacgccccgatacg 6665697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 777
Target Start/End: Original strand, 32659069 - 32659224
Alignment:
Q  629 caagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttctacc--- 725  Q
    ||||||||||| || |||||||| |||||||||||||||||||        || ||||||||||||||||||||| ||||||||||   ||||||||       
T  32659069 caagtctggcaacgctatcaaaaacatattgtctcttctaaccccaaaatatagggtttctcgtcaccacatagcgatagctattccatcttctacccat 32659168  T
Q  726 -act---gattgaattctactctgtttctcgtctctctaatgttatgtttcttctg 777  Q
     |||   ||||||||||||||  ||||||| || ||||||||||||||||||||||    
T  32659169 tacttatgattgaattctactaagtttctcctccctctaatgttatgtttcttctg 32659224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 723
Target Start/End: Original strand, 6665857 - 6665951
Alignment:
Q  629 caagtctggcagcggtatcaaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttcta 723  Q
    |||||||||||||| |||||||| |||||||||||||||||||        || ||||||||||||||||||||| ||| |||||| | ||||||    
T  6665857 caagtctggcagcgctatcaaaaacatattgtctcttctaacccaaaaaaatagggtttctcgtcaccacatagcgataactattccctcttcta 6665951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 773 - 840
Target Start/End: Original strand, 36606474 - 36606541
Alignment:
Q  773 ttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatgttc 840  Q
    |||| |||||||||||  ||||||||||||  || |||||||||||||||||||||| ||||||||||    
T  36606474 ttctactgtttgtttttaatataaattagtattaactgttaagtagtcaacattagacaaagatgttc 36606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 603
Target Start/End: Original strand, 6665692 - 6665796
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgta 594  Q
    |||||||||| |||||||||||||||||||||||  || ||||||||| |||||||||         |  ||||||||||||||||||| ||||||| ||    
T  6665692 gatacgtcccaatacgcgtatcggagaagtatcgagcaattaatattt-ttttttgaa---aaaaaattaccgatacgtgtcggatacggctaacttata 6665787  T
Q  595 ctccgacac 603  Q
    |||||||||    
T  6665788 ctccgacac 6665796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 778 - 834
Target Start/End: Original strand, 6666038 - 6666094
Alignment:
Q  778 ctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaag 834  Q
    |||||||||||||||||||||||||| || ||  |||||||||||||||||| ||||    
T  6666038 ctgtttgttttcgatataaattagtgttaactagtaagtagtcaacattagacaaag 6666094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 32658815 - 32658881
Alignment:
Q  355 tctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg 421  Q
    |||||||| ||||||||||||||||||  ||||| ||||| |||||||| |||| ||||| ||||||    
T  32658815 tctctaaaaccccgatactccaaaaataatgaagaatcgtgtccgacacatatctgatactgatacg 32658881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 29794923 - 29795021
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatc-gtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaat 459  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||  || ||   |||||||||||||||||   ||||||  |||||||| |||||||||    
T  29794923 aagccccgatactccaaaaatggcgaagaatcggtatccgacaccgatacgcgcccgatacgtcccgatac--atatcggggaagtatcgagcaattaat 29795020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 8871240 - 8871281
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatc 397  Q
    |||| ||||||||||||||||||||| |||||||||| ||||    
T  8871240 ctctcaagccccgatactccaaaaattgtgaagtatcatatc 8871281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 361 - 837
Target Start/End: Complemental strand, 46398266 - 46397774
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacg----------tcccgatacgggtatcggaaaagtatcgg 450  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||          | |||||||||||||| ||||||| ||||    
T  46398266 aagccccgatactccaaaaatggtgtagtatcgtatccaacacgtatctgataccgatacgctccgatacgttccgatacgggtatcagaaaagtgtcgg 46398167  T
Q  451 gcaattaatannnnnnnnn--gaaaaacaatgaccgatacgtgtcggatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttt 548  Q
    ||||||||||           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  46398166 gcaattaatatttatttttttgaaaaacaatgaccgatacgtgtcggatacgtcccgatacacgtatcggagaagtatcggacaattaatatttattttt 46398067  T
Q  549 tgaaggnnnnnnn-tggccgatacgtgtcggatacgactaacttgtactccgacacaacttactcatactccgacacttatcaagtctggcagcggtatc 647  Q
    |||||         || |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||| ||||| ||||    
T  46398066 tgaagaaaaaaaaatgaccgatacgtgtcggatacgactaacttgtactcccacacagcttacttatactccgacacctatcaagtctgacagcgctatc 46397967  T
Q  648 aaaatcatattgtctcttctaacctnnnnnnntatggtttctcgtcaccacatagcaatagctattctcccttc-------taccactgattgaattcta 740  Q
    |||||||||  |||| |||||||||       || ||||||||||||||||||| ||| || ||||||| ||||       |||||| ||||||||||||    
T  46397966 aaaatcata--gtcttttctaacctaaaaaaatagggtttctcgtcaccacatatcaacagttattctctcttccaatcattaccaccgattgaattcta 46397869  T
Q  741 ctctgtttctcgtctctctaatgttatgtttcttctgctgtttgttttcgatataaattagtgatagctgttaagtagtcaacattagataaagatg 837  Q
      ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || || || ||||||| ||||||||||| |||||||    
T  46397868 --ctgtttctcttctctctaatgttatgtttcttctgttgtttgttttcgatataaattattgttaactattaagtaatcaacattagacaaagatg 46397774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 29096172 - 29096271
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaata 460  Q
    ||||||||||||| |||||||| ||||| ||||| ||  ||||||||||||||| ||||||| |||||| | |||||||| ||||||||| |||||||||    
T  29096172 aagccccgatacttcaaaaatgatgaagaatcgtgtctaacacgtatccgatactgatacgttccgatatgcgtatcggagaagtatcggccaattaata 29096271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 683 - 777
Target Start/End: Original strand, 33369016 - 33369114
Alignment:
Q  683 ggtttctcgtcaccacatagcaatagctattctcccttcta-------ccactgattgaattctactctgtttctcgtctctctaatgttatgtttcttc 775  Q
    ||||||||||||||||||||| |||||||||| | ||||||       ||||||||||||||||||||||||||   ||||||||||| |||||||||||    
T  33369016 ggtttctcgtcaccacatagcgatagctattccctcttctaaccattaccactgattgaattctactctgtttc---tctctctaatgctatgtttcttc 33369112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 361 - 458
Target Start/End: Original strand, 41430386 - 41430483
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaa 458  Q
    |||||||  ||||||||||||||||||| |||||  | ||| ||||||| ||||||| ||| ||| ||||| |||||||| |||||||||||| ||||    
T  41430386 aagccccagtactccaaaaatggtgaagaatcgtgcctgacccgtatccaataccgaaacgccccaatacgcgtatcggagaagtatcgggcagttaa 41430483  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 356 - 460
Target Start/End: Original strand, 33368710 - 33368813
Alignment:
Q  356 ctctaaagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaat 455  Q
    |||| |||||||||||||  |||| |||||||| || || |||||| ||||||| ||||||||||||   |||||| |||||||| ||||||| ||||||    
T  33368710 ctctgaagccccgatacttaaaaattggtgaagaattgtgtccgacgcgtatcc-ataccgatacgtattgatacgcgtatcggagaagtatcaggcaat 33368808  T
Q  456 taata 460  Q
    |||||    
T  33368809 taata 33368813  T

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Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 624
Target Start/End: Original strand, 33368779 - 33368895
Alignment:
Q  505 gatacgcgtatcggagaagtatcggacagttaatatttattttttgaaggnnnnnnntggccgatacgtgtcggatacgactaacttgtactccgacaca 604  Q
    ||||||||||||||||||||||| | || ||||||||||||||||    |       || |||||||||||| |||||| |||||||||||||| ||||     
T  33368779 gatacgcgtatcggagaagtatcaggcaattaatatttatttttt---tgaaaataatgaccgatacgtgtcagatacggctaacttgtactccaacacg 33368875  T
Q  605 acttactcatactccgacac 624  Q
    ||| ||| |||||| |||||    
T  33368876 actaacttatactctgacac 33368895  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 495 - 553
Target Start/End: Complemental strand, 23206363 - 23206306
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatttattttttgaag 553  Q
    |||| |||||||||| ||||| |||||||||||  ||| ||||||||||||||||||||    
T  23206363 gatatgtcccgatacacgtattggagaagtatc-aacaattaatatttattttttgaag 23206306  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 29096227 - 29096273
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaatatt 541  Q
    ||||||| |||||| |||||||||||||||||||| || ||||||||    
T  29096227 gatacgttccgatatgcgtatcggagaagtatcggccaattaatatt 29096273  T

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Target: scaffold0274 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 361 - 458
Target Start/End: Complemental strand, 14497 - 14400
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatacgtcccgatacgggtatcggaaaagtatcgggcaattaa 458  Q
    |||||||  ||||||||||||||||||| |||||  | ||| ||||||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||    
T  14497 aagccccactactccaaaaatggtgaagaatcgtgcctgacgcgtatccaataccgatacgccccgatacgcgtatcggagaagtatcgggcagttaa 14400  T

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Target: scaffold0274; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 537
Target Start/End: Complemental strand, 14442 - 14400
Alignment:
Q  495 gatacgtcccgatacgcgtatcggagaagtatcggacagttaa 537  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  14442 gatacgccccgatacgcgtatcggagaagtatcgggcagttaa 14400  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 4498 - 4439
Alignment:
Q  361 aagccccgatactccaaaaatggtgaagtatcgtatccgacacgtatccgataccgatac 420  Q
    ||||| |||||||| ||||||||||||||||||| ||||| | | | |||||||||||||    
T  4498 aagcctcgatactctaaaaatggtgaagtatcgtgtccgataagcacccgataccgatac 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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