View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2703_low_33 (Length: 361)
Name: NF2703_low_33
Description: NF2703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2703_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 19 - 348
Target Start/End: Complemental strand, 12320862 - 12320532
Alignment:
| Q |
19 |
ttactcacgctgtaaagattgaaaatgaatgtgatagagaggtatagatagtggtgatatgtctgcaatgcattaaatgaggattcagaatttgttggga |
118 |
Q |
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| T |
12320862 |
ttactcacgctgtaaagattgaaaatgaatgtgatagagaggtgtagatggtggtgaaatgtctgcaaagcatttaatgaggattcagaatttgttggga |
12320763 |
T |
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| Q |
119 |
aaattgttggcaacatttaatgctcaagttgtggaattttcttccttattgtgaggctaaccaataaggttctgacatgag-ttttgtctatgagcatta |
217 |
Q |
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| T |
12320762 |
aaattgttggcaacatttaatgctcaagttgtggaattttcttccttattgtgaggctaaccaataaggttctgacatgagtttttgtctatgagcatta |
12320663 |
T |
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| Q |
218 |
gttgacaaggaaagaagtgttgtgattttgtatgatatttgccattttgaatgcaagagggcttgttttcatgttcatgagttgccaatgcatttaccat |
317 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12320662 |
gttgacaaggaaagaagtgttgtgattttgtaagatatttgccattttgaatgcaagagggcttgttttcatgttcatgagttgccaatgcatttaccat |
12320563 |
T |
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| Q |
318 |
aagtgttgataatatgataatgatgtgatat |
348 |
Q |
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| T |
12320562 |
aagtgttgataatatgataatgatgtgatat |
12320532 |
T |
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