View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2703_low_42 (Length: 314)
Name: NF2703_low_42
Description: NF2703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2703_low_42 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 38 - 297
Target Start/End: Complemental strand, 40641890 - 40641631
Alignment:
| Q |
38 |
gttgacaagcattatactactggtcttctttcactcttgaaacaacagttcttacaaagtaaattacctccatatttcgtaaatgaaatcgtggttgcta |
137 |
Q |
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| T |
40641890 |
gttgacaagcattatactactggtcttctttcactcttgaaacaacagttcttacaaagtaaattacctccatatttcgtaaatgatatcgtggttgcta |
40641791 |
T |
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| Q |
138 |
atttgtacggaatattcatttcttcctcctcataacattcaattttcccgtttggtctaatacctcaatcaatgggaaatagagtaaatcaataacaagt |
237 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40641790 |
atttgtacggaatattcatttctttctcctcataacattcaattttcccgtttggtctaatacctcaatcaatgggaaatagagtaaatcaataacaagt |
40641691 |
T |
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| Q |
238 |
ttcaaaataacttcgtcaaggttcaggtattccgttcatgtcaataaaaaaggtaaaaat |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40641690 |
ttcaaaataacttcgtcaaggttcaggtattccgttcatgtcaataaaaaaggtaaaaat |
40641631 |
T |
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