View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2703_low_68 (Length: 236)
Name: NF2703_low_68
Description: NF2703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2703_low_68 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 42591864 - 42592085
Alignment:
| Q |
1 |
atgtagttctcttgtgctctgatgccacgaggtatgagtaatttaaattggaataacctatcagtttagttttaaaatatcactctcttttcaatttact |
100 |
Q |
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| T |
42591864 |
atgtagttctcttgtgctctgatgccacgaggtatgagtaatttaaattagaataacctatcagttttgttttaaaatatcactctcttttcaatttact |
42591963 |
T |
|
| Q |
101 |
ttctaaaatatatatnnnnnnnttgaacatccttaaagtatatgaaatcaatgaagttagtctctagtgtatattatattaacgttaaattgatgaatta |
200 |
Q |
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|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42591964 |
ttctaaaatatatattaaaaaattgaacatccttaaagtatatgaaatcaatgaagttagtctctagtgtatattatattaacgttaaattgatgaatta |
42592063 |
T |
|
| Q |
201 |
gaaagacattgatggtacttta |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
42592064 |
gaaagacattgatggtacttta |
42592085 |
T |
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