View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2705_high_16 (Length: 376)
Name: NF2705_high_16
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_high_16 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 22875582 - 22875943
Alignment:
| Q |
1 |
acagttaaaaatttcgacnnnnnnnnctctgcaggtagtttaggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaa |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22875582 |
acagttaaaaatttcgacttttttttctctgcaggtagtttaggaagttcagagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaa |
22875681 |
T |
|
| Q |
101 |
gaatataatgagaagctaaaattaaacctgttgaagatgagaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22875682 |
gaatataatgagaagctaaaattaaacctgttgaagatgagaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaa |
22875781 |
T |
|
| Q |
201 |
aggttgtgttggtttattactagcatctattggagctaaagtaacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatcca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22875782 |
aggttgtgttggtttattactagcatctattggagctaaagtaacatcaatcttttttttcactccatcatagtcaatccatacctgcatgggatatcca |
22875881 |
T |
|
| Q |
301 |
ctgaaaagggataaatccctgaatcgattatattcatcgtaatatcctgtagaagttgaaat |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22875882 |
ctgaaaagggataaatccctgaatcgattatattcatcgtaatatcctgtagaagttgaaat |
22875943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 22888952 - 22889317
Alignment:
| Q |
1 |
acagttaaaaatttcgacnnnnnnnnctctgcaggtagtttaggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaa |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888952 |
acagttaaaaatttcgacttttttttctctgcaggtagtttaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaa |
22889051 |
T |
|
| Q |
101 |
gaatataatgagaagctaaaattaaacctgttgaagatgagaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaa |
200 |
Q |
| |
|
||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22889052 |
gaatatactgagaagctaccattaaccctgttgaagatgagaatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaa |
22889151 |
T |
|
| Q |
201 |
aggttgtgttggtttattactagcatc------tattggagctaaagtaacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatggga |
294 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||| || |
|
|
| T |
22889152 |
aggttgtgttggtttattactagcaccaacactcattggtgctaaagtaacatcaatctttttcttcactccatcatattcaatccatacctgcataggg |
22889251 |
T |
|
| Q |
295 |
tatccactgaaaagggataaatccctgaatcgattatattcatcgtaatatcctgtagaagttgaa |
360 |
Q |
| |
|
||||||||| |||||||||||||| ||||| || ||| |||| |||||||||| || ||||||| |
|
|
| T |
22889252 |
tatccactggaaagggataaatccttgaattgaccataaccatcataatatcctgcaggagttgaa |
22889317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 40 - 324
Target Start/End: Original strand, 22814726 - 22815016
Alignment:
| Q |
40 |
ttaggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatg |
139 |
Q |
| |
|
||||||||||| || ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
22814726 |
ttaggaagttcagatatttcaaggttttgagcttggccattaaccttaaaactccacccaagaatataatgagaagctacaagtaaccctgttgaagatg |
22814825 |
T |
|
| Q |
140 |
agaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatc------tattgg |
233 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
22814826 |
agaatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcaccaacactcattgg |
22814925 |
T |
|
| Q |
234 |
agctaaagtaacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaat |
324 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||| || ||| ||||| || |||||||||| ||||||||| |
|
|
| T |
22814926 |
agctaaagtaacatcaatctttttcttcactccatcatagtcaatccatacctgtataggaaatccattggaaagggataactccctgaat |
22815016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 52 - 360
Target Start/End: Original strand, 22880302 - 22880616
Alignment:
| Q |
52 |
gagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgagaatccaacat |
151 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
22880302 |
gagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaagaacataatgagaagctaaaattaaccttgttgaagatgataatccaacat |
22880401 |
T |
|
| Q |
152 |
acattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttatt------actagcatctattggagctaaagtaac |
245 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| || | || || |||||||| ||||| |
|
|
| T |
22880402 |
acatactattgttgagaattggagaaagatctttggtcaatgacaacaaatgtcgtgttggtttattattaaaaccaacactaatcggagctaatgtaac |
22880501 |
T |
|
| Q |
246 |
atctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaatcgattatattcatcgtaatat |
345 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||| |||||| |
|
|
| T |
22880502 |
ctcaatctttttcttcactccatcatagtcaatccatacctgcatgggatatccactggaaagggataaatccttgaatcgatcataatcatcataatat |
22880601 |
T |
|
| Q |
346 |
cctgtagaagttgaa |
360 |
Q |
| |
|
|||| |||| ||||| |
|
|
| T |
22880602 |
cctgcagaaattgaa |
22880616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 42 - 360
Target Start/End: Original strand, 22839753 - 22840077
Alignment:
| Q |
42 |
aggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
141 |
Q |
| |
|
|||||| || |||||||||||| |||||| ||| ||||||||| |||||||||||||| ||||||||||||||||| ||| || ||||||||||||||| |
|
|
| T |
22839753 |
aggaaggtcagagatttcaaggttttgagattggccattaaccataaaactccaaccatgaatataatgagaagctgcaatgaaccctgttgaagatgag |
22839852 |
T |
|
| Q |
142 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattact------agcatctattggag |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| | || | ||||| |
|
|
| T |
22839853 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaaatggag |
22839952 |
T |
|
| Q |
236 |
ctaaagtaacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaatcgattatattc |
335 |
Q |
| |
|
|||| |||||||| ||| ||||| |||||| ||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
22839953 |
ctaaggtaacatcaatctttttcttcactctatcatattcaatccatacttgcataggatatccactggagagggataaatccctgaatcgattatattc |
22840052 |
T |
|
| Q |
336 |
atcgtaatatcctgtagaagttgaa |
360 |
Q |
| |
|
|||||||||||||| || ||||||| |
|
|
| T |
22840053 |
atcgtaatatcctgcaggagttgaa |
22840077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 42 - 222
Target Start/End: Original strand, 22885326 - 22885506
Alignment:
| Q |
42 |
aggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
141 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
22885326 |
aggaagttcagagatttcaaggttttgagcttggctattaaccttaaaactccaaccaagaatataatgagaagctacaattaaccctgttgaagatgag |
22885425 |
T |
|
| Q |
142 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattacta |
222 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22885426 |
aatccaacatacattctattgttgagtattggagaaagatctttggtcaatgataacaaaggttgtgttggtttatcacta |
22885506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 42 - 360
Target Start/End: Original strand, 22830732 - 22831056
Alignment:
| Q |
42 |
aggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
141 |
Q |
| |
|
|||||| || |||||||||||| |||||| ||| ||||||||| |||||||||||||| ||||||||||||||||| ||| || ||||||||||||||| |
|
|
| T |
22830732 |
aggaaggtcagagatttcaaggttttgagattggccattaaccataaaactccaaccatgaatataatgagaagctgcaatgaaccctgttgaagatgag |
22830831 |
T |
|
| Q |
142 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattact------agcatctattggag |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| | || | ||||| |
|
|
| T |
22830832 |
aatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaactggag |
22830931 |
T |
|
| Q |
236 |
ctaaagtaacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaatcgattatattc |
335 |
Q |
| |
|
|||| |||||||| ||| |||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| | || |
|
|
| T |
22830932 |
ctaaggtaacatcaatctttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtatc |
22831031 |
T |
|
| Q |
336 |
atcgtaatatcctgtagaagttgaa |
360 |
Q |
| |
|
||| |||||||||| || ||||||| |
|
|
| T |
22831032 |
atcataatatcctgcaggagttgaa |
22831056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 52 - 309
Target Start/End: Original strand, 22805029 - 22805283
Alignment:
| Q |
52 |
gagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgagaatccaacat |
151 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |
|
|
| T |
22805029 |
gagattacaaggttttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctgcaagtaaccctgttgaagatgagaatccaacat |
22805128 |
T |
|
| Q |
152 |
acattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctattggagctaaagtaacatctat |
251 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||| || | ||| | |||||||||||||||||| || |
|
|
| T |
22805129 |
acatactattgttaagaattggagaaagatctttggtcattgataacgaaggtcctgttggttta--ac-aacataaactggagctaaagtaacatcaat |
22805225 |
T |
|
| Q |
252 |
cnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaagg |
309 |
Q |
| |
|
| |||||||||||| |||||||||||||| || |||| ||||||| ||||| |
|
|
| T |
22805226 |
ctttttcttcactccatcataatcaatccatacctgtataggatttccactggaaagg |
22805283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 40 - 248
Target Start/End: Original strand, 22913373 - 22913578
Alignment:
| Q |
40 |
ttaggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatg |
139 |
Q |
| |
|
||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| |
|
|
| T |
22913373 |
ttaggaagttcagagattacaagattttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagttagaattgaacctgttgaagatg |
22913472 |
T |
|
| Q |
140 |
agaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctattggagctaa |
239 |
Q |
| |
|
|||||||||||||||| ||| |||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||| || | ||| ||||||||||| |
|
|
| T |
22913473 |
agaatccaacatacatactagtgttaagaattgaagaaagatctttgttcaatgataacaaaggttgttttggttta--ac-aacattaattggagctaa |
22913569 |
T |
|
| Q |
240 |
agtaacatc |
248 |
Q |
| |
|
||||||||| |
|
|
| T |
22913570 |
agtaacatc |
22913578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 42 - 216
Target Start/End: Original strand, 22858160 - 22858334
Alignment:
| Q |
42 |
aggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
141 |
Q |
| |
|
|||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||| |
|
|
| T |
22858160 |
aggaagtttagagatttcaaggttttgagcttggccattaaccttaaaactccaaccaagaatataatgggaagctacaattaccccggttgaagatgag |
22858259 |
T |
|
| Q |
142 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggttta |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||| |
|
|
| T |
22858260 |
aatccaacatacattctattgttgagaattggagaaagatctttcgtgaatgataacaaaggtcgtgctggttta |
22858334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 42 - 216
Target Start/End: Original strand, 22809342 - 22809516
Alignment:
| Q |
42 |
aggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
141 |
Q |
| |
|
|||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||| |
|
|
| T |
22809342 |
aggaagtttagagatatcaaggttttgagcttgaccattaaccttaaaactccaaccaagaacataatgagaagatagaatagaacctgttgaagatgag |
22809441 |
T |
|
| Q |
142 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggttta |
216 |
Q |
| |
|
|||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
22809442 |
aatccaacatacatactagtgttaagaattggagaaagatctttggtgaatgataacaaaggtcgtgttggttta |
22809516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 42 - 309
Target Start/End: Original strand, 22893654 - 22893918
Alignment:
| Q |
42 |
aggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
141 |
Q |
| |
|
||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || || | |||| || | ||||| |
|
|
| T |
22893654 |
aggaagttcagagattacaaggttttgagcttgaccattaatcttaaaactccaaccaagaatataatgagaagttagaaatgaaccagtagctgatgaa |
22893753 |
T |
|
| Q |
142 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctattggagctaaag |
241 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| || | ||| ||||||||||||| |
|
|
| T |
22893754 |
aatccaacatacatactattgttaagaattggagaaagatctttggtcaatgataacaaaggttgttttggttta--ac-aacattaattggagctaaag |
22893850 |
T |
|
| Q |
242 |
taacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaagg |
309 |
Q |
| |
|
||||||| ||| | |||||||| ||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
22893851 |
taacatcaatctttttcttttcaccatcatattcaatccatacctgcataggatagccactgataagg |
22893918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 34 - 310
Target Start/End: Original strand, 22897965 - 22898238
Alignment:
| Q |
34 |
ggtagtttaggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttg |
133 |
Q |
| |
|
||||| ||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| || | |
|
|
| T |
22897965 |
ggtagcttaggaagttcagagattacaaggttttcagcttgaccattaaccttaaaactccaaccaagaatataatgagaagtgaaaactgaaccagtag |
22898064 |
T |
|
| Q |
134 |
aagatgagaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctattgg |
233 |
Q |
| |
|
||||| |||||||||||||| |||||||| | |||||||||||||||| |||||||||| |||||||||||| |||||||| || | ||| ||||| |
|
|
| T |
22898065 |
ctgatgaaaatccaacatacatactattgtttaaaattggagaaagatctctggtcaatgacaacaaaggttgttttggttta--ac-aacattaattgg |
22898161 |
T |
|
| Q |
234 |
agctaaagtaacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaaggg |
310 |
Q |
| |
|
||||||||||||||| ||| | |||||||| ||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
22898162 |
agctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacctgcataggattgccactgaaaaggg |
22898238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 248
Target Start/End: Original strand, 22825952 - 22826162
Alignment:
| Q |
35 |
gtagtttaggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttga |
134 |
Q |
| |
|
|||||||||||||||| || ||| |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| | |||| || | |
|
|
| T |
22825952 |
gtagtttaggaagttcagaaattacaagattttgagcttgaccattaagcttaaaacttcaaccaagaatataatgagaagtgaaaactgaaccagtagc |
22826051 |
T |
|
| Q |
135 |
agatgagaatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctattgga |
234 |
Q |
| |
|
|||||||||||||||||||| |||||||| | |||||||| ||||||| |||||||||| |||||||||||| |||||||| || | ||| |||||| |
|
|
| T |
22826052 |
tgatgagaatccaacatacatactattgttcaaaattggaggaagatctctggtcaatgaaaacaaaggttgttttggttta--ac-aacattaattgga |
22826148 |
T |
|
| Q |
235 |
gctaaagtaacatc |
248 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22826149 |
gctaaagtaacatc |
22826162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 22858388 - 22858454
Alignment:
| Q |
261 |
cactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaatcga |
327 |
Q |
| |
|
|||||||||||| || |||||||||||||| ||||||||||| |||||||||| || |||||||| |
|
|
| T |
22858388 |
cactccatcatattctatccatacctgcataggatatccactagaaagggataagtcgttgaatcga |
22858454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 22809574 - 22809618
Alignment:
| Q |
265 |
ccatcatagtcaatccatacctgcatgggatatccactgaaaagg |
309 |
Q |
| |
|
|||||||| ||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
22809574 |
ccatcatattcaatccatacatgcataggatagccactgaaaagg |
22809618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 359
Target Start/End: Complemental strand, 21151013 - 21150690
Alignment:
| Q |
42 |
aggaagttcggagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
141 |
Q |
| |
|
||||||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||| |
|
|
| T |
21151013 |
aggaagttcagagatttcaaggttttgagccaggccattaaccttaaaactccaaccaagaatataatgagaagctgcaagtaaccctgttgaagatgag |
21150914 |
T |
|
| Q |
142 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttatt------actagcatctattggag |
235 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| || || | || ||||||| |
|
|
| T |
21150913 |
aatccaacatacatactattgttgagaactggagaaagatctttggtcaatgataacaaaggtcttgctggttttttattaaaaccaacactaattggag |
21150814 |
T |
|
| Q |
236 |
ctaaagtaacatctatcnnnnnnnncactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctgaatcgattatattc |
335 |
Q |
| |
|
|||||||||||| ||| | |||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||| || || || |
|
|
| T |
21150813 |
ctaaagtaacattaatcttcttcttttcaccatcatattcaatccatacatgcataggatatccactgaaaagggataaatcattgaatccatcattatc |
21150714 |
T |
|
| Q |
336 |
atcgtaatatcctgtagaagttga |
359 |
Q |
| |
|
||| ||||| |||| ||||||||| |
|
|
| T |
21150713 |
atcataatagcctgcagaagttga |
21150690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University