View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2705_high_22 (Length: 324)
Name: NF2705_high_22
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 42243546 - 42243855
Alignment:
| Q |
1 |
tcttctatttgtggtttgtaattacacaagttttgctcatataagcatcttaaaccacactagcttccattgccaacaaaaatatctagtaactacagta |
100 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42243546 |
tcttctatttgtggtttgtgattacacaagttttgctcatataagcatcttaaaccacactagcttccattgccaacaaaaatatctagtaactacagta |
42243645 |
T |
|
| Q |
101 |
cccatatctcacattctcattaccaaatatttcacatgtttaagcaactaacgaacacaacacattctaagcttcattttggattgcaacgcatcaaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42243646 |
cccatatctcacattctcattaccaaatatttcacatgtttaagcaactaacgaacacaacacattctaagcttcattttggattgcaacgcatcaaaat |
42243745 |
T |
|
| Q |
201 |
tattaaggcttaattggattttgatctatgtcttaaaacttatatagcctaactcaaaatctataaaaactggc-ttttaaggttagaacgactccgact |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |
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| T |
42243746 |
tattaaggcttaattggattttgatctatgtcttaaaacttatatagcctaactcaaaatctataaaaactggctttttaaggttagaacgactccaact |
42243845 |
T |
|
| Q |
300 |
tatatgaata |
309 |
Q |
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|||||||||| |
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| T |
42243846 |
tatatgaata |
42243855 |
T |
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