View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2705_high_55 (Length: 235)
Name: NF2705_high_55
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_high_55 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 36357637 - 36357418
Alignment:
| Q |
1 |
catacacatatttttgcattttatttttgtgccattctttaatcaactttcttggtgcatttatattgatccaagaattctactattgcagctgaacttt |
100 |
Q |
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| T |
36357637 |
catacacatatttttgcattttaattttgtgccattctttaatcaactttcttggtgcatttatattgatccaagaattctactattgcagctgaacttt |
36357538 |
T |
|
| Q |
101 |
tgggatttgaccattttatcccaccttatgcaaatacccatggtgcagacatagttcaaggtgttaattatgcatccggtgcagcagggatccgcaatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36357537 |
tgggatttgaccattttatcccaccttatgcaaatacccatggtgcagacatagttcaaggtgttaattatgcatccggtgcagcagggatccgcaatga |
36357438 |
T |
|
| Q |
201 |
gactggaaaacagttggtat |
220 |
Q |
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|||||||| ||||||||||| |
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| T |
36357437 |
gactggaacacagttggtat |
36357418 |
T |
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