View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2705_low_22 (Length: 324)
Name: NF2705_low_22
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 37203593 - 37203892
Alignment:
| Q |
18 |
gtaatcacatgtgtcgtgctacataataagatgccacaatacacacatgtatataggttccacgactatcttcagtttccttcattatgttctacatgtt |
117 |
Q |
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| T |
37203593 |
gtaatcacatgtgtcgtgctacataataagatgccacaatacacacatgtatataggttccacgactatcttcagtttccttcattatgttctacatgtt |
37203692 |
T |
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| Q |
118 |
tccgtctaatttattatttataactttctcatgaaggtaaaagagtggcttcatagcttaggaatagtagatcaaatggtaatggtgcaagatgatgaag |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
37203693 |
tccgtctaatttattatttataactttctcatgaaggtaaaagagtggcttcatagcttaggaatagtagatcaaatggtaatggtgcaggatgatgaag |
37203792 |
T |
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| Q |
218 |
aacctgatgatggagctatacctatacatcatgaagacagcgttaaaaacaggtactaggacaggaacttaatgacttacatgaaaataacttcatctca |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
37203793 |
aacctgatgatggagctatacctatacatcatgaagacagcgttaaaaacaggtactaggacaggaacttaatgacttacatgaaaataacttcttctca |
37203892 |
T |
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