View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2705_low_24 (Length: 310)
Name: NF2705_low_24
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_low_24 |
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Alignment Details
Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 3 - 296
Target Start/End: Original strand, 51689719 - 51690012
Alignment:
| Q |
3 |
gatgtcgaagaaaatacaagtgaaataactcataaaccaaaggcttgcaatctcatttgtatggttgttcttagttcaatgttttaaacaaaatgtttcc |
102 |
Q |
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| T |
51689719 |
gatgttgaacaatatacaagtgaaataactcataaaccaaaggcttgcaatctcatttgtatggttgttcttagttcaatgttttaaacaaaatgtttcc |
51689818 |
T |
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| Q |
103 |
ttttaaatggaagtgccttcaattcactagcagagtagccaggctggatgcagtgttttctttggagtattagatagttgacttcctttagattcgaatt |
202 |
Q |
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| T |
51689819 |
ttttaaatggaagtgccttcaattcactagcagagtagccaggctggatgcagtgttttctttggagtattagatagttgacttcctttatattcgaatt |
51689918 |
T |
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| Q |
203 |
caaatactctctaatatataacaacaaaaatggttatggttagcaggtaacgaaatgttgtggtcaggtcactccgcactaggggtcgagtttg |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51689919 |
caaatactctctaatatataacaacaaaaatggttatggttagcaggtaacgaaatgttgtggtcaggtcactccgcactaggggtcgagtttg |
51690012 |
T |
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