View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2705_low_35 (Length: 268)
Name: NF2705_low_35
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_low_35 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 16294469 - 16294719
Alignment:
| Q |
1 |
acggttttacttttctccatctttcatttctcttcactcactctaactaatttctcatattctatgtttttctctaattacttttggagaaaaatcatac |
100 |
Q |
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| T |
16294469 |
acggttttacttttctccatctttcatttctcttcactcactctaactaatttctcatattctatgtttttctctaattacttttggagaaaaatcatac |
16294568 |
T |
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| Q |
101 |
tttctttcaattaatgcattcatcacactataaataaatcttcaaaggaaaagtaccatttcttcatctaagacaaccattttatctctagaatctagta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16294569 |
tttctttcaattaatgcattcatcacactataaataaatcttcaaaggaaaagtaccatttcttcatctaagacaaccattttatctctagaatctagta |
16294668 |
T |
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| Q |
201 |
tgaattttgttaacaaacaacatcacttgatcatctataatgtgtcacaag |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
16294669 |
tgaattttgttaacaaacaacatcacttgatcatctatcctgtgtcacaag |
16294719 |
T |
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