View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2705_low_39 (Length: 262)
Name: NF2705_low_39
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_low_39 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 10024752 - 10024502
Alignment:
| Q |
4 |
ttagattattaacccttttaagccaact---------ggttccattaatgctagcagactatctcagcttgttcattttctacgcttaaacattggttat |
94 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
10024752 |
ttagattattaacccttttaagccaactttgtacactggttccattaatgctagcagactatctcagcttgttcatttgctacgcttaaacattggttat |
10024653 |
T |
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| Q |
95 |
cttccatgcattcatatacttaggtgtccctatctttagagggagaccataagctatttaaattgtcttcttggaaagcctctctcctttctatagccga |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
10024652 |
cttccatgcattcatatacttaggtgtccctatctttagagggagaccataagctatttaaattgccttcttggaaagcctctctcctttctatagccga |
10024553 |
T |
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| Q |
195 |
cacaactcaacttgtaatctctgtaatacaaagtatgatgatgcagatcct |
245 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10024552 |
caaaactcaacttgtaatctctgtaatacaaagtatgatgatgcagatcct |
10024502 |
T |
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