View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2705_low_43 (Length: 250)
Name: NF2705_low_43
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2705_low_43 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 43742073 - 43742307
Alignment:
| Q |
1 |
agccaaattacgagattgttgagcaaatgcattggtaaattttatttagctagtagttatatgcttaaatcaagtgttttggaattttgtggtttaaggg |
100 |
Q |
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| T |
43742073 |
agccaaattacgagattgttgagcaaatgcattggtaaattttatttagctagtagttatatgcttaaatcaagtgttttggaattttgtggtttaaggg |
43742172 |
T |
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| Q |
101 |
gcttgttaaatttattttcaaatgatcaagtgtgtcaaaacatggggaacatcattattggattgtactacaccacttgttgaattgataaacaagaaag |
200 |
Q |
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| T |
43742173 |
gcttgttaaatttattttcaaatgatcaagtgtgtcaaaacatggggaacatcattattggattgtactacaccacttgttgaattgataaacaagaaag |
43742272 |
T |
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| Q |
201 |
gaaacattcctttggatcttgttataagtctttcc |
235 |
Q |
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| T |
43742273 |
gaaacattcctttggatcttgttataagtctttcc |
43742307 |
T |
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