View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2705_low_61 (Length: 227)

Name: NF2705_low_61
Description: NF2705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2705_low_61
NF2705_low_61
[»] chr2 (43 HSPs)
chr2 (1-225)||(21624294-21624513)
chr2 (140-226)||(2438666-2438752)
chr2 (140-226)||(18840960-18841046)
chr2 (140-222)||(15972903-15972985)
chr2 (140-226)||(38117106-38117192)
chr2 (141-226)||(5040760-5040845)
chr2 (140-226)||(28596495-28596581)
chr2 (140-226)||(37559003-37559089)
chr2 (146-225)||(12224250-12224329)
chr2 (171-226)||(30404828-30404883)
chr2 (140-226)||(34006937-34007024)
chr2 (152-226)||(5367218-5367292)
chr2 (140-226)||(6940281-6940367)
chr2 (172-226)||(20242706-20242760)
chr2 (144-224)||(27460065-27460142)
chr2 (145-224)||(14996171-14996254)
chr2 (140-204)||(24009343-24009407)
chr2 (146-226)||(29176446-29176526)
chr2 (140-204)||(35056927-35056991)
chr2 (140-204)||(37419802-37419866)
chr2 (191-226)||(19536395-19536430)
chr2 (140-227)||(21091748-21091835)
chr2 (140-203)||(26769571-26769634)
chr2 (140-227)||(34993929-34994016)
chr2 (140-198)||(42511329-42511387)
chr2 (194-227)||(11223864-11223897)
chr2 (193-226)||(18421989-18422022)
chr2 (140-204)||(30717466-30717530)
chr2 (140-211)||(19580232-19580303)
chr2 (192-223)||(44635527-44635558)
chr2 (140-198)||(36756280-36756338)
chr2 (193-227)||(36756344-36756378)
chr2 (172-226)||(43585984-43586038)
chr2 (193-226)||(974773-974806)
chr2 (193-226)||(12668423-12668456)
chr2 (193-226)||(15657890-15657923)
chr2 (191-224)||(20473350-20473383)
chr2 (193-226)||(23058442-23058475)
chr2 (193-226)||(30717530-30717563)
chr2 (153-226)||(31808103-31808176)
chr2 (193-226)||(33153450-33153483)
chr2 (193-226)||(33884077-33884110)
chr2 (140-204)||(44860379-44860443)
[»] chr6 (51 HSPs)
chr6 (140-226)||(34595160-34595246)
chr6 (140-226)||(28152124-28152210)
chr6 (140-226)||(32978846-32978932)
chr6 (140-226)||(7977777-7977863)
chr6 (140-226)||(28715321-28715407)
chr6 (140-226)||(4877969-4878054)
chr6 (140-226)||(7265540-7265626)
chr6 (140-226)||(17841536-17841622)
chr6 (140-222)||(8776915-8777002)
chr6 (140-226)||(9658905-9658992)
chr6 (140-226)||(12696350-12696441)
chr6 (140-226)||(6898228-6898314)
chr6 (140-226)||(32511613-32511699)
chr6 (145-226)||(853811-853892)
chr6 (145-226)||(16833334-16833415)
chr6 (140-204)||(9107306-9107370)
chr6 (140-204)||(16766756-16766820)
chr6 (140-226)||(31384946-31385042)
chr6 (140-203)||(8389415-8389478)
chr6 (141-189)||(17302631-17302679)
chr6 (146-226)||(33001242-33001322)
chr6 (171-226)||(24645507-24645562)
chr6 (150-222)||(1191660-1191729)
chr6 (140-182)||(31959220-31959262)
chr6 (193-226)||(9911528-9911561)
chr6 (193-226)||(10770674-10770707)
chr6 (191-224)||(16388215-16388248)
chr6 (140-204)||(7248417-7248481)
chr6 (140-204)||(8365455-8365519)
chr6 (140-204)||(10339061-10339125)
chr6 (172-220)||(23771610-23771658)
chr6 (141-204)||(26247479-26247542)
chr6 (140-183)||(7625185-7625228)
chr6 (195-226)||(9522917-9522948)
chr6 (153-204)||(9522950-9523001)
chr6 (155-226)||(12627539-12627610)
chr6 (142-226)||(21395262-21395341)
chr6 (191-226)||(26402678-26402713)
chr6 (145-215)||(1315969-1316039)
chr6 (142-188)||(2545509-2545555)
chr6 (140-226)||(7378005-7378091)
chr6 (192-226)||(7801155-7801189)
chr6 (142-204)||(10827493-10827555)
chr6 (140-226)||(13360320-13360405)
chr6 (140-198)||(17327597-17327655)
chr6 (193-226)||(8365519-8365552)
chr6 (193-222)||(9107370-9107399)
chr6 (188-224)||(6327513-6327549)
chr6 (140-204)||(18367895-18367959)
chr6 (194-226)||(27904037-27904069)
chr6 (140-176)||(34446647-34446683)
[»] chr5 (37 HSPs)
chr5 (140-226)||(21191003-21191089)
chr5 (140-226)||(21576692-21576778)
chr5 (144-226)||(42893386-42893468)
chr5 (140-226)||(43564907-43564993)
chr5 (140-225)||(30098985-30099070)
chr5 (138-204)||(21522809-21522875)
chr5 (138-204)||(21533375-21533441)
chr5 (138-204)||(21542089-21542155)
chr5 (140-223)||(30502335-30502418)
chr5 (140-223)||(30542678-30542761)
chr5 (141-226)||(31084349-31084439)
chr5 (146-223)||(26312798-26312875)
chr5 (146-226)||(27932261-27932341)
chr5 (191-226)||(6247648-6247683)
chr5 (140-226)||(14873543-14873634)
chr5 (191-226)||(15884014-15884049)
chr5 (145-224)||(32630687-32630766)
chr5 (140-226)||(43001826-43001917)
chr5 (145-224)||(15382507-15382592)
chr5 (191-227)||(8420052-8420088)
chr5 (141-185)||(17088358-17088402)
chr5 (194-226)||(21351906-21351938)
chr5 (140-204)||(39268545-39268609)
chr5 (140-204)||(39698600-39698664)
chr5 (191-226)||(24906299-24906334)
chr5 (191-226)||(33178051-33178086)
chr5 (140-226)||(4105285-4105371)
chr5 (140-226)||(21194070-21194156)
chr5 (144-226)||(28588625-28588707)
chr5 (140-198)||(30098391-30098449)
chr5 (197-226)||(7218271-7218300)
chr5 (193-226)||(13287399-13287432)
chr5 (140-181)||(38464320-38464361)
chr5 (193-226)||(39698567-39698600)
chr5 (193-226)||(41633761-41633794)
chr5 (140-204)||(6401557-6401621)
chr5 (140-204)||(18592132-18592196)
[»] scaffold0652 (1 HSPs)
scaffold0652 (140-222)||(409-491)
[»] chr4 (47 HSPs)
chr4 (140-226)||(23292933-23293019)
chr4 (145-226)||(21945529-21945610)
chr4 (140-226)||(35161062-35161148)
chr4 (144-226)||(49431052-49431134)
chr4 (156-221)||(38846975-38847040)
chr4 (140-225)||(3947708-3947798)
chr4 (144-226)||(28964199-28964281)
chr4 (140-226)||(2361922-2362008)
chr4 (140-226)||(4157175-4157261)
chr4 (140-226)||(4672032-4672118)
chr4 (140-226)||(8423665-8423751)
chr4 (164-226)||(29205470-29205532)
chr4 (140-226)||(35157932-35158018)
chr4 (140-226)||(42640555-42640636)
chr4 (140-226)||(715552-715640)
chr4 (140-226)||(752878-752966)
chr4 (144-225)||(16073421-16073502)
chr4 (156-217)||(34306767-34306828)
chr4 (140-204)||(30982814-30982878)
chr4 (156-226)||(9996866-9996936)
chr4 (140-226)||(12797285-12797371)
chr4 (140-226)||(12895221-12895307)
chr4 (176-226)||(54580006-54580056)
chr4 (145-226)||(4157462-4157543)
chr4 (150-226)||(40481662-40481743)
chr4 (140-204)||(5414108-5414172)
chr4 (141-199)||(848015-848073)
chr4 (140-186)||(20743213-20743259)
chr4 (140-226)||(28084548-28084636)
chr4 (193-226)||(30298973-30299006)
chr4 (193-226)||(30327841-30327874)
chr4 (140-204)||(53381537-53381602)
chr4 (148-204)||(15724498-15724554)
chr4 (140-204)||(19482727-19482791)
chr4 (191-226)||(6879463-6879498)
chr4 (144-226)||(482194-482271)
chr4 (140-194)||(18966567-18966621)
chr4 (194-224)||(28000743-28000773)
chr4 (193-226)||(11596352-11596385)
chr4 (140-181)||(11931362-11931403)
chr4 (140-205)||(12323967-12324032)
chr4 (140-181)||(17876237-17876278)
chr4 (137-186)||(21873306-21873355)
chr4 (137-186)||(21929167-21929216)
chr4 (144-188)||(7424722-7424765)
chr4 (140-204)||(22234826-22234890)
chr4 (140-176)||(40784029-40784065)
[»] chr1 (53 HSPs)
chr1 (146-226)||(18190061-18190141)
chr1 (140-226)||(18337355-18337441)
chr1 (148-226)||(51410051-51410129)
chr1 (140-226)||(22515834-22515920)
chr1 (140-222)||(37598861-37598943)
chr1 (144-226)||(40258884-40258966)
chr1 (140-222)||(42359396-42359478)
chr1 (141-226)||(1815283-1815368)
chr1 (140-224)||(46348330-46348414)
chr1 (147-226)||(40181897-40181976)
chr1 (140-226)||(1486651-1486742)
chr1 (145-204)||(19562567-19562626)
chr1 (140-226)||(5898213-5898299)
chr1 (142-226)||(18471326-18471405)
chr1 (144-226)||(1704946-1705025)
chr1 (148-226)||(38078616-38078694)
chr1 (191-227)||(19058854-19058890)
chr1 (140-204)||(31694646-31694710)
chr1 (140-204)||(32461400-32461464)
chr1 (140-204)||(40917808-40917872)
chr1 (144-226)||(2896072-2896154)
chr1 (188-226)||(21378604-21378642)
chr1 (191-225)||(24334703-24334737)
chr1 (193-226)||(6612171-6612204)
chr1 (145-186)||(15323234-15323275)
chr1 (193-226)||(24577186-24577219)
chr1 (193-226)||(47989523-47989556)
chr1 (140-204)||(9828103-9828167)
chr1 (140-204)||(25934675-25934739)
chr1 (144-224)||(39130718-39130798)
chr1 (155-223)||(43492456-43492524)
chr1 (140-204)||(47989556-47989620)
chr1 (140-222)||(16297228-16297312)
chr1 (191-226)||(22881614-22881649)
chr1 (191-226)||(41877468-41877503)
chr1 (140-183)||(46940755-46940798)
chr1 (193-227)||(5376500-5376534)
chr1 (140-218)||(10577682-10577760)
chr1 (140-226)||(26830614-26830699)
chr1 (194-224)||(28273089-28273119)
chr1 (140-182)||(29144327-29144369)
chr1 (149-226)||(31015069-31015140)
chr1 (193-226)||(113325-113358)
chr1 (193-226)||(2218265-2218298)
chr1 (193-226)||(5944309-5944342)
chr1 (193-226)||(6332696-6332729)
chr1 (193-226)||(30173762-30173795)
chr1 (193-226)||(31694710-31694743)
chr1 (140-224)||(5927287-5927371)
chr1 (140-204)||(5944342-5944406)
chr1 (140-196)||(6427531-6427587)
chr1 (156-224)||(11605898-11605966)
chr1 (191-223)||(31672893-31672925)
[»] chr3 (48 HSPs)
chr3 (140-226)||(55401101-55401187)
chr3 (138-227)||(15999955-16000050)
chr3 (140-226)||(20503491-20503577)
chr3 (144-226)||(28918027-28918111)
chr3 (146-224)||(7171529-7171607)
chr3 (148-226)||(10954978-10955056)
chr3 (144-226)||(40993286-40993368)
chr3 (141-226)||(18426975-18427060)
chr3 (140-226)||(51206300-51206386)
chr3 (140-226)||(11252004-11252088)
chr3 (140-226)||(25775535-25775619)
chr3 (140-226)||(27505272-27505363)
chr3 (140-204)||(15796230-15796294)
chr3 (140-226)||(3631710-3631796)
chr3 (142-204)||(4987229-4987291)
chr3 (140-204)||(14209172-14209236)
chr3 (140-218)||(13845472-13845550)
chr3 (172-222)||(25093532-25093582)
chr3 (140-226)||(35222964-35223050)
chr3 (177-226)||(3865700-3865749)
chr3 (140-226)||(8789495-8789583)
chr3 (140-204)||(41961586-41961650)
chr3 (140-204)||(55213021-55213085)
chr3 (146-204)||(8039265-8039324)
chr3 (191-226)||(8587019-8587054)
chr3 (191-226)||(8593163-8593198)
chr3 (140-226)||(24204988-24205074)
chr3 (171-222)||(26492183-26492234)
chr3 (140-198)||(14216957-14217015)
chr3 (140-198)||(14223086-14223144)
chr3 (178-224)||(15505775-15505821)
chr3 (142-224)||(23657767-23657849)
chr3 (196-226)||(26508136-26508166)
chr3 (140-182)||(34185059-34185101)
chr3 (193-226)||(1509565-1509598)
chr3 (193-226)||(4990967-4991000)
chr3 (191-224)||(8383285-8383318)
chr3 (140-224)||(12100297-12100381)
chr3 (140-204)||(12704598-12704663)
chr3 (140-204)||(25074842-25074907)
chr3 (193-226)||(28812541-28812574)
chr3 (193-222)||(34185123-34185152)
chr3 (193-226)||(34910343-34910376)
chr3 (140-181)||(37077441-37077482)
chr3 (193-226)||(49651786-49651819)
chr3 (140-224)||(4466547-4466631)
chr3 (198-226)||(35312080-35312108)
chr3 (140-184)||(40052380-40052424)
[»] chr7 (40 HSPs)
chr7 (140-226)||(9778526-9778617)
chr7 (140-226)||(13770717-13770808)
chr7 (140-226)||(21880178-21880264)
chr7 (140-226)||(5409778-5409869)
chr7 (140-226)||(15680835-15680921)
chr7 (140-226)||(32287410-32287496)
chr7 (141-226)||(33994238-33994323)
chr7 (140-224)||(21864836-21864920)
chr7 (146-221)||(24105709-24105784)
chr7 (169-223)||(7197273-7197327)
chr7 (153-227)||(8234171-8234245)
chr7 (140-215)||(598245-598320)
chr7 (144-226)||(12278861-12278943)
chr7 (140-223)||(20549820-20549903)
chr7 (140-226)||(43027411-43027502)
chr7 (140-221)||(40287309-40287385)
chr7 (140-204)||(24339701-24339765)
chr7 (140-226)||(32093961-32094053)
chr7 (144-226)||(1401051-1401131)
chr7 (140-226)||(25481928-25482014)
chr7 (193-226)||(18039025-18039058)
chr7 (193-226)||(21560529-21560562)
chr7 (193-226)||(24339668-24339701)
chr7 (145-226)||(26733330-26733411)
chr7 (193-226)||(27945067-27945100)
chr7 (193-224)||(11272586-11272617)
chr7 (140-203)||(11665376-11665439)
chr7 (141-204)||(26033398-26033461)
chr7 (191-226)||(28155596-28155631)
chr7 (140-186)||(17852066-17852112)
chr7 (140-226)||(18035812-18035897)
chr7 (193-226)||(2334276-2334309)
chr7 (193-226)||(3991350-3991383)
chr7 (140-177)||(8842286-8842323)
chr7 (193-226)||(9408334-9408367)
chr7 (155-204)||(21930687-21930736)
chr7 (144-189)||(22868110-22868155)
chr7 (193-222)||(25822685-25822714)
chr7 (197-226)||(26033465-26033494)
chr7 (194-226)||(7438732-7438764)
[»] chr8 (44 HSPs)
chr8 (141-226)||(40332217-40332302)
chr8 (144-224)||(15023208-15023288)
chr8 (140-226)||(5813618-5813704)
chr8 (144-226)||(31557022-31557104)
chr8 (140-222)||(36450701-36450783)
chr8 (140-205)||(29510240-29510305)
chr8 (144-226)||(20679346-20679428)
chr8 (140-213)||(4498342-4498415)
chr8 (140-220)||(926735-926815)
chr8 (140-226)||(3025577-3025663)
chr8 (140-218)||(3951483-3951561)
chr8 (140-226)||(18407745-18407831)
chr8 (140-226)||(33405331-33405417)
chr8 (170-226)||(20873095-20873151)
chr8 (140-204)||(22652035-22652099)
chr8 (140-204)||(34450968-34451032)
chr8 (191-226)||(4948678-4948713)
chr8 (176-227)||(22596019-22596070)
chr8 (141-204)||(24205756-24205819)
chr8 (140-226)||(8342998-8343079)
chr8 (144-182)||(8798804-8798842)
chr8 (140-226)||(26434206-26434292)
chr8 (188-226)||(30077382-30077420)
chr8 (140-218)||(43737758-43737836)
chr8 (140-197)||(6065593-6065650)
chr8 (141-226)||(14134725-14134810)
chr8 (193-226)||(24669459-24669492)
chr8 (193-226)||(25566867-25566900)
chr8 (146-226)||(31580080-31580160)
chr8 (140-179)||(4673361-4673400)
chr8 (179-226)||(4786324-4786371)
chr8 (191-226)||(24613546-24613581)
chr8 (140-203)||(29447046-29447109)
chr8 (141-215)||(126295-126369)
chr8 (140-186)||(22197678-22197724)
chr8 (140-226)||(24413506-24413592)
chr8 (191-225)||(30271253-30271287)
chr8 (140-182)||(40064032-40064074)
chr8 (193-226)||(2572056-2572089)
chr8 (152-181)||(14513127-14513156)
chr8 (145-186)||(22943301-22943342)
chr8 (140-204)||(11803318-11803382)
chr8 (140-204)||(15816065-15816129)
chr8 (140-176)||(34127179-34127215)
[»] scaffold0050 (1 HSPs)
scaffold0050 (140-227)||(70303-70390)
[»] scaffold0083 (1 HSPs)
scaffold0083 (140-226)||(45477-45563)
[»] scaffold0053 (1 HSPs)
scaffold0053 (140-217)||(8833-8910)
[»] scaffold0361 (1 HSPs)
scaffold0361 (140-226)||(14556-14639)
[»] scaffold0793 (1 HSPs)
scaffold0793 (140-226)||(4828-4916)
[»] scaffold0019 (1 HSPs)
scaffold0019 (140-204)||(71784-71848)
[»] scaffold0009 (2 HSPs)
scaffold0009 (150-226)||(174510-174586)
scaffold0009 (150-226)||(180023-180099)
[»] scaffold0022 (1 HSPs)
scaffold0022 (146-224)||(90871-90949)
[»] scaffold0306 (1 HSPs)
scaffold0306 (140-226)||(13426-13518)
[»] scaffold0246 (1 HSPs)
scaffold0246 (150-226)||(19601-19682)
[»] scaffold0152 (1 HSPs)
scaffold0152 (140-226)||(21809-21901)
[»] scaffold0086 (1 HSPs)
scaffold0086 (140-204)||(2987-3051)
[»] scaffold0003 (1 HSPs)
scaffold0003 (140-204)||(241653-241717)
[»] scaffold0512 (1 HSPs)
scaffold0512 (140-215)||(4983-5058)
[»] scaffold0475 (1 HSPs)
scaffold0475 (140-222)||(3338-3420)
[»] scaffold0044 (1 HSPs)
scaffold0044 (139-204)||(53239-53304)
[»] scaffold0025 (1 HSPs)
scaffold0025 (193-226)||(23796-23829)
[»] scaffold0004 (2 HSPs)
scaffold0004 (194-226)||(123654-123686)
scaffold0004 (193-226)||(83186-83219)
[»] scaffold0380 (1 HSPs)
scaffold0380 (140-215)||(8638-8713)
[»] scaffold0154 (1 HSPs)
scaffold0154 (142-204)||(13472-13534)
[»] scaffold0021 (1 HSPs)
scaffold0021 (196-226)||(130508-130538)
[»] scaffold0722 (1 HSPs)
scaffold0722 (181-226)||(7020-7065)
[»] scaffold0223 (1 HSPs)
scaffold0223 (193-226)||(20198-20231)
[»] scaffold0171 (1 HSPs)
scaffold0171 (193-226)||(23446-23479)
[»] scaffold0136 (1 HSPs)
scaffold0136 (193-226)||(3849-3882)
[»] scaffold0027 (1 HSPs)
scaffold0027 (193-226)||(46708-46741)
[»] scaffold0450 (1 HSPs)
scaffold0450 (140-204)||(8571-8635)
[»] scaffold0049 (1 HSPs)
scaffold0049 (194-226)||(63799-63831)
[»] scaffold0011 (1 HSPs)
scaffold0011 (194-226)||(17750-17782)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 21624513 - 21624294
Alignment:
Q  1 atatggctaaacttatgaagtttgcttattttatgattctcttcctttctctgtatcttgttgcaagtaagccatttccccttacaagcactgactataa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21624513 atatggctaaacttatgaagtttgtttattttatgattctcttcctttctctgtatcttgttgcaagtaagccatttccccttacaagcactgactataa 21624414  T
Q  101 gccgtcttttaaagtctcatctttacttattatctatatgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccg 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||     ||||||||||    
T  21624413 gccgtcttttaaagtctcatctttacttattacctatatgcacggacactccttggattaggtgtgtcccgctgtcggacacgtg-----tccgacaccg 21624319  T
Q  201 acacttgtaattacactgaattatg 225  Q
    |||||||||||||||||||||||||    
T  21624318 acacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 2438666 - 2438752
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  2438666 gcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 2438752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 18840960 - 18841046
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||| || || |||||||||||||||||||||||| ||||||||    
T  18840960 gcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgt 18841046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 15972985 - 15972903
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    ||||||||| || | ||||||||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15972985 gcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaatt 15972903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 38117106 - 38117192
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| ||| |||||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||||||| ||| |||||    
T  38117106 gcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgt 38117192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 5040845 - 5040760
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||| |||| |||| |||| ||||||||| ||| || ||||||||||||||||||||||||| ||||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgt 5040760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 28596581 - 28596495
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| |  ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||    
T  28596581 gcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgt 28596495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 37559089 - 37559003
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||| | |||| ||||||||||||||||||    ||||||||||||||||||||||||| ||||||||||    
T  37559089 gcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgt 37559003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 12224329 - 12224250
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 225  Q
    ||||||||||||||||| |||| || ||||||||||||| | || ||||||||||||||||||||||||| || ||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatg 12224250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 30404828 - 30404883
Alignment:
Q  171 ggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| |||| || |||||| |||||||||||||||||||||||||||||    
T  30404828 ggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgt 30404883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 34006937 - 34007024
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt-tgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||| |||||||||||||||||||| ||||||  |  || ||| |||||||||| | | |||||||||||||||||    
T  34006937 gcacggacactccttgaattaggtgtgttccggtgtcagacacgaataggtgtcccacaccgacacctatgattacactgaattatgt 34007024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 5367292 - 5367218
Alignment:
Q  152 cttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| |||| |||| |||||| | |||| || |||||||||||||| | |||||||||||||||||||    
T  5367292 cttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgt 5367218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 6940367 - 6940281
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||| || || ||||||||||||   ||||| |||||||||| || || || ||||||||||||||||||||| ||||||||    
T  6940367 gcacggacaatcatttgattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgt 6940281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 20242706 - 20242760
Alignment:
Q  172 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| |||||||||||| |||||||||||||| | |||||||||||||||||||    
T  20242706 gtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgt 20242760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 27460142 - 27460065
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||||||||||||  |||| ||||||| ||| ||||||    |||||||||||| |||||||||||||||||||||    
T  27460142 ggacactccttggattagacgtgtcccggtgttggatacgtgtg---tccgacaccgacccttgtaattacactgaattat 27460065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 14996171 - 14996254
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc-----gacaccgacacttgtaattacactgaattat 224  Q
    ||||||||| |||||||| ||||||||||||| |||||||| ||| |||     |||||||||||||||||||||||| ||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtg-tgtgtccgacaagacaccgacacttgtaattacactaaattat 14996254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 24009407 - 24009343
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||||||| ||| |||| || ||||| ||||||||| || ||||||||||||||    
T  24009407 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 29176446 - 29176526
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||||||||||||||||  | |||||||||| |||  || ||| ||||| |||||| |||||||||||||||||||    
T  29176446 acacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgt 29176526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 35056991 - 35056927
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||  ||||||| ||||| | ||||||||||||||| || ||||||||||||||    
T  35056991 gcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 37419866 - 37419802
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||| |||| |||||||||||||||  | || ||||||||||||||    
T  37419866 gcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 19536395 - 19536430
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||||    
T  19536395 tccgacaccgacacttgtaattacactgaattatgt 19536430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 21091835 - 21091748
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgtt 227  Q
    |||||||||||| | ||| ||||||||| |||||||| |||| |||   | || ||||| ||||||||||||||||||||| ||||||    
T  21091835 gcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgtt 21091748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 26769634 - 26769571
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca 203  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||| || ||||| |||||||    
T  26769634 gcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 34993929 - 34994016
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgtt 227  Q
    ||||| |||||||||| |||||| |||| || ||||||||||| ||| || | |||||| ||||| | |||||||| |||||||||||    
T  34993929 gcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgtt 34994016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 42511329 - 42511387
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 198  Q
    |||||||||||||| |||||||  |||| || |||||||||||||||||| ||||||||    
T  42511329 gcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 11223864 - 11223897
Alignment:
Q  194 gacaccgacacttgtaattacactgaattatgtt 227  Q
    ||||||||||||||||||||||||||||||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgtt 11223897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 18422022 - 18421989
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgt 18421989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 30717466 - 30717530
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||||||||||| || | || |||||| |||||||| || ||||||| ||||||    
T  30717466 gcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacac 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 19580232 - 19580303
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaat 211  Q
    |||| ||||||| | ||||||| ||||||  ||||| ||||||||||||| ||||||||||| |||| ||||    
T  19580232 gcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtccgacaccgatacttataat 19580303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 223
Target Start/End: Complemental strand, 44635558 - 44635527
Alignment:
Q  192 ccgacaccgacacttgtaattacactgaatta 223  Q
    ||||||||||||||||||||||||||||||||    
T  44635558 ccgacaccgacacttgtaattacactgaatta 44635527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 36756280 - 36756338
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 198  Q
    |||| ||||||||| |||||||| ||||| |||||||||||| ||||||| | ||||||    
T  36756280 gcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacac 36756338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 36756344 - 36756378
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgtt 227  Q
    |||||||||||||| ||||||||||||||||||||    
T  36756344 cgacaccgacacttataattacactgaattatgtt 36756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 43585984 - 43586038
Alignment:
Q  172 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||||||| | || |||||||||||||||||| |||||| ||||||||||    
T  43585984 gtgtctgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgt 43586038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 974806 - 974773
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||| ||||    
T  974806 cgacaccgacacttgtaattacactgaataatgt 974773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 12668423 - 12668456
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||||||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgt 12668456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 15657923 - 15657890
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| ||||||||||||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgt 15657890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 20473383 - 20473350
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||| ||||||||||||||||||||||||||    
T  20473383 tccgacatcgacacttgtaattacactgaattat 20473350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 23058442 - 23058475
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||| |||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgt 23058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 30717530 - 30717563
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||||||||||||||||||||||||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgt 30717563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 31808176 - 31808103
Alignment:
Q  153 ttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||| | ||||||| ||| |||| || | | |||| ||||| | |||||||||||||||||||    
T  31808176 ttggattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatgt 31808103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 33153483 - 33153450
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||||||||||||||||||||||    
T  33153483 cgacacggacacttgtaattacactgaattatgt 33153450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 33884110 - 33884077
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||| ||||    
T  33884110 cgacaccgacacttgtaattacactgaatcatgt 33884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 44860443 - 44860379
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| | ||||||||||| ||| |||||||||| ||| || ||| ||||| ||||    
T  44860443 gcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacac 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 34595246 - 34595160
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  34595246 gcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 34595160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 28152210 - 28152124
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| |||||||| ||||||||  ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  28152210 gcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 28152124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 32978846 - 32978932
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||  |||| ||||||||||||| |||| || ||||||||||||||||||||||||||| ||||||||    
T  32978846 gcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgt 32978932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 7977777 - 7977863
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||||||||| ||||||| ||||| || |||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  7977777 gcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgt 7977863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 28715407 - 28715321
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||||| || | |||||| |||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||    
T  28715407 gcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 28715321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4878054 - 4877969
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || ||||||||||||||||||||||| ||| ||||||||    
T  4878054 gcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgt 4877969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 7265540 - 7265626
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||| ||||| ||||||||  | ||||||||||||||| || |||| |||||||||||||| | |||||||||||||||||||    
T  7265540 gcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgt 7265626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 17841536 - 17841622
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| ||||  | ||||||||||| ||| || |||||||||| |||||||||||||||| ||||||||    
T  17841536 gcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgt 17841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 8776915 - 8777002
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaatt 222  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||| || ||     ||||||| ||||||||||||||||||||||    
T  8776915 gcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaatt 8777002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 9658992 - 9658905
Alignment:
Q  140 gcacggacactccttgga-ttaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||| || ||  |||||||||  | |||||||||||||||||||    
T  9658992 gcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgt 9658905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 12696441 - 12696350
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| |||||||||||||| |||||||| |||||||| ||||||||| || ||     |||||| |||||||||||||||||||||||||||    
T  12696441 gcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgt 12696350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 6898228 - 6898314
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| |||||| | |||||||| ||||| |||||| |||||||  | || ||||||||||||||||||||||||||| ||||||||    
T  6898228 gcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgt 6898314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 32511613 - 32511699
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||  ||||||| ||| |||| |||| ||||  ||| |||||||||||| |||||| |||||||||||||||||||    
T  32511613 gcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgt 32511699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 853811 - 853892
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||| |||||||||| ||||  |  |||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||    
T  853811 gacactcattggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgt 853892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 16833415 - 16833334
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||| ||||| ||||||| | |||||||||| ||||| || ||  |||||||||||||||||||||||||| |||||    
T  16833415 gacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgt 16833334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 9107306 - 9107370
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||  ||||| ||||||||||||||    
T  9107306 gcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 16766820 - 16766756
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||| || | |||||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  16766820 gcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 31385042 - 31384946
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc----------cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||| || ||          |||||| |||||||||||||||||||||||||||    
T  31385042 gcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaattatgt 31384946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 8389415 - 8389478
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggaca-cgtgttgtatccgacaccgaca 203  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||||  |||||||||||||    
T  8389415 gcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgaca 8389478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 17302679 - 17302631
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgt 189  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||    
T  17302679 cacggacattctttggattaggtgtgttccgatgtcggacacgtgttgt 17302631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 33001242 - 33001322
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||||| || || ||||||| ||||||||| || |||||||||||||| | |||||||| | ||||||||    
T  33001242 acactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgt 33001322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 24645562 - 24645507
Alignment:
Q  171 ggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||| || || ||||||||||||||||| || ||||||||||||    
T  24645562 ggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgt 24645507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 1191660 - 1191729
Alignment:
Q  150 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||| |||||||||||||   ||||||||||||| || || ||| ||| ||||||||||||||||||||||||    
T  1191660 tcctcggattaggtgtgt---ggtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaatt 1191729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 31959262 - 31959220
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacac 182  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  31959262 gcacggacactcctcggattaggtgtgtcccggtgtcggacac 31959220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 9911528 - 9911561
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgt 9911561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 10770674 - 10770707
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgt 10770707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 16388215 - 16388248
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||||||||||||||||||||||||||||    
T  16388215 tccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 7248481 - 7248417
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| ||||| |  |||| |||||||||||||| |||||| ||| ||||||||||    
T  7248481 gcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 8365455 - 8365519
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||| |||||| |||||||| |||| || ||||||||||||||| || ||||| ||||||||    
T  8365455 gcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 10339061 - 10339125
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||  ||||||| |||| || |||||||||| |||| || ||||||||||||||    
T  10339061 gcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 23771658 - 23771610
Alignment:
Q  172 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaa 220  Q
    ||||||||||| ||| || ||||||||||||| ||||||||||||||||    
T  23771658 gtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaa 23771610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 26247542 - 26247479
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacac 204  Q
    |||||||||||||  ||||||||||||| ||||||| |||||||||| || ||||||||||||||    
T  26247542 cacggacactcctcagattaggtgtgtt-cggtgtcagacacgtgttggtgtccgacaccgacac 26247479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 7625228 - 7625185
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacg 183  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||    
T  7625228 gcacgaacactccttggattaagcgtgttccggtgtcggacacg 7625185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 226
Target Start/End: Complemental strand, 9522948 - 9522917
Alignment:
Q  195 acaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgt 9522917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 9523001 - 9522950
Alignment:
Q  153 ttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||| ||||  ||||||||||||||||| | |||||||||||||||    
T  9523001 ttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacac 9522950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 12627539 - 12627610
Alignment:
Q  155 ggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||| ||||  |||||||||||| |||| || ||||||| |||||| | | |||||||||||||||||    
T  12627539 ggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgt 12627610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 21395262 - 21395341
Alignment:
Q  142 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||| |||| | |||||| |||||    || |  ||||||||||||||||||||||||| ||||||||    
T  21395262 acggacactccttggattaggcgtgtcctggtgtccgacac----tg-acacgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 26402678 - 26402713
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||| |||||||||||||||||    
T  26402678 tccgacaccgacacttgtgattacactgaattatgt 26402713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 1316039 - 1315969
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 215  Q
    |||||| || || ||||| |||||| |||||||||||| ||  ||  ||||||||||||||||||||||||    
T  1316039 gacacttctcgggttaggcgtgttctggtgtcggacacatgacgtgcccgacaccgacacttgtaattaca 1315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 2545555 - 2545509
Alignment:
Q  142 acggacactccttggattaggtgtgttccggtgtcggacacgtgttg 188  Q
    |||||||||| |||||||||||||| ||||||||| ||||| |||||    
T  2545555 acggacactcattggattaggtgtgctccggtgtcagacacatgttg 2545509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 7378091 - 7378005
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| ||  ||||||  |||| |||||||||||  | ||| || |||||||||||||| | |||||||| ||||||||||    
T  7378091 gcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgt 7378005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 7801155 - 7801189
Alignment:
Q  192 ccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||| |||||||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgt 7801189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 10827493 - 10827555
Alignment:
Q  142 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||| ||  ||||||| || ||||| ||||||||||||||||| |||||||| |||||    
T  10827493 acggacacttctatgattaggcgtattccgatgtcggacacgtgttgtgtccgacacagacac 10827555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 13360320 - 13360405
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||| | |||||||| ||||  | ||||||||||  |||||| || |||||||| || | |||||||||||||||||||    
T  13360320 gcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgt 13360405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 17327597 - 17327655
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 198  Q
    |||||||||||||| |||||||| |||| || ||||| ||||||||| || ||||||||    
T  17327597 gcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 8365519 - 8365552
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||| |||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgt 8365552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 9107370 - 9107399
Alignment:
Q  193 cgacaccgacacttgtaattacactgaatt 222  Q
    ||||||||||||||||||||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaatt 9107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 6327513 - 6327549
Alignment:
Q  188 gtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  6327513 gtatccgacatcgacacttgtaattacacttaattat 6327549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 18367959 - 18367895
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||||||| ||| |||| || ||||| |||| |||| || || |||||||||||    
T  18367959 gcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 27904037 - 27904069
Alignment:
Q  194 gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| ||||||||||||||||||||||    
T  27904037 gacaccgacatttgtaattacactgaattatgt 27904069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 34446683 - 34446647
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtc 176  Q
    |||||||||||||||||||||||||||| || |||||    
T  34446683 gcacggacactccttggattaggtgtgtcccagtgtc 34446647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 21191003 - 21191089
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21191003 gcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgt 21191089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 21576692 - 21576778
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| || ||||| ||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  21576692 gcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgt 21576778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 42893468 - 42893386
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||   |||||| |||| | ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||    
T  42893468 ggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgt 42893386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 43564993 - 43564907
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| || |||||||| |||| |||| ||||||||| ||| || |||||||||||||||| |||||||||| ||||||||    
T  43564993 gcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgt 43564907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 30098985 - 30099070
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 225  Q
    ||||| ||||||||||||| ||| |||| || ||||| ||||||||| ||||||||||||||||| | ||||||||| ||||||||    
T  30098985 gcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatg 30099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 21522875 - 21522809
Alignment:
Q  138 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||||| || ||||||||||||||    
T  21522875 atgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 21533441 - 21533375
Alignment:
Q  138 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||||| || ||||||||||||||    
T  21533441 atgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 21542155 - 21542089
Alignment:
Q  138 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||| |||||||||| || |||| |||||||||||||||||| || ||||||||||||||    
T  21542155 atgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 30502335 - 30502418
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 223  Q
    ||||| ||| |||||||||||||  ||| || |||||||||| |||| || |||||||||||||| | ||||||||||||||||    
T  30502335 gcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaatta 30502418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 30542678 - 30542761
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 223  Q
    ||||| ||| |||||||||||||  ||| || |||||||||| |||| || |||||||||||||| | ||||||||||||||||    
T  30542678 gcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaatta 30542761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 31084439 - 31084349
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac-----cgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||| ||||||||  ||| || ||||||||||||||| || ||||||||     ||||||||||||||||| ||||||||||    
T  31084439 cacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgt 31084349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 26312875 - 26312798
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 223  Q
    |||||||| ||||||||||||| | |||||| ||||||| | || ||||||||||| || | ||||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaatta 26312798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 27932341 - 27932261
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||| | |||||| |||| | |||||| ||||||||| || ||||||||| | | ||||||||||||||||||||||    
T  27932341 acactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgt 27932261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 6247683 - 6247648
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||||    
T  6247683 tccgacaccgacacttgtaattacactgaattatgt 6247648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 14873634 - 14873543
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc-----gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| ||||||| ||||||||||||  |||     ||||||||||| | |||||||||| ||||||||    
T  14873634 gcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgt 14873543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 15884049 - 15884014
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||||    
T  15884049 tccgacaccgacacttgtaattacactgaattatgt 15884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 32630687 - 32630766
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||| | |||||||||||  |  |||||||||||||| ||||||||||| ||||| | |||||||| ||||||||    
T  32630687 gacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattat 32630766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 43001917 - 43001826
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac-----cgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| | |||||  ||||||||| || ||||||||     | ||||||||||||||||||||||||||    
T  43001917 gcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgt 43001826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 15382592 - 15382507
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtat------ccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||| |||||||| |||| ||||||||||||| |||| || |      |||||||||||||||||||||| ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattat 15382507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 8420088 - 8420052
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgtt 227  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8420088 tccgacaccgacacttgtaattacattgaattatgtt 8420052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 17088402 - 17088358
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtg 185  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtg 17088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 21351906 - 21351938
Alignment:
Q  194 gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgt 21351938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 39268545 - 39268609
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||| |||| || ||||||||||| ||| || ||| ||||||||||    
T  39268545 gcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 39698664 - 39698600
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||| ||||  |||||||||| || ||| || ||||||||||||||    
T  39698664 gcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 24906299 - 24906334
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24906299 tccgataccgacacttgtaattacactgaattatgt 24906334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 33178086 - 33178051
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||| ||||||||    
T  33178086 tccgacaccgacacttgtaattacactaaattatgt 33178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4105371 - 4105285
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| || || || ||||| | | |  || || ||| ||||||||||||||||||||||||||    
T  4105371 gcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgt 4105285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 21194070 - 21194156
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||  |||||||| |||| |||| || ||| ||||| | || | |||||||||||||| ||||    
T  21194070 gcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgt 21194156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 28588625 - 28588707
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||| | |||||| | |||| | |||||| || | |||| || |||||||||||||| | |||||||||||||||||||    
T  28588625 ggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgt 28588707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 30098449 - 30098391
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 198  Q
    ||||||||| |||| ||||||||||||| | |||||| ||||||||| || ||||||||    
T  30098449 gcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Original strand, 7218271 - 7218300
Alignment:
Q  197 accgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgt 7218300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 13287399 - 13287432
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||| ||||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgt 13287432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 38464320 - 38464361
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggaca 181  Q
    |||| ||||||||| ||||||||||||| |||||||||||||    
T  38464320 gcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 39698600 - 39698567
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||||||||||||||||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgt 39698567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 41633794 - 41633761
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| ||||||||||||||||||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgt 41633761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 6401621 - 6401557
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||||||| ||| || | || ||||| ||||||||| || |||||||| |||||    
T  6401621 gcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 18592196 - 18592132
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||| | | |||||  |||| ||| |||| |||||||||||| ||||||||||||||    
T  18592196 gcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 409 - 491
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  409 gcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaatt 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 23292933 - 23293019
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  23292933 gcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgt 23293019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 21945610 - 21945529
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||| |||||||| ||||| |||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgt 21945529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 35161148 - 35161062
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||  | |||||||||||||||||||||||||||||||| || |||||| | || |||| |||||||||||||||||||    
T  35161148 gcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgt 35161062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 49431134 - 49431052
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| |||| ||| |||| ||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||    
T  49431134 ggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgt 49431052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 38846975 - 38847040
Alignment:
Q  156 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaat 221  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  38846975 gattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaat 38847040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 3947708 - 3947798
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatg 225  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||| || ||     |||||| ||||||||||||||||||||||||||    
T  3947708 gcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatg 3947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 28964199 - 28964281
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| |||||||| |||| || |||||||| | |||| || |||||||| |||||||||||||||||||||||||||    
T  28964199 ggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgt 28964281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 2361922 - 2362008
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||| |  ||||||||||||  ||||||| |||||| || || |||||||||||||||| |||||||||| ||||||||    
T  2361922 gcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgt 2362008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4157261 - 4157175
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||||||||| | ||||||||| |  |||||||||||| |||| || |||||||||||||||||||||| |||| ||||||||    
T  4157261 gcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgt 4157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 4672032 - 4672118
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| |||||||||||||||||   |||||| |||||| |||||| ||||||||||||||||||| | ||  |||||||||||||||    
T  4672032 gcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatatagctacactgaattatgt 4672118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 8423665 - 8423751
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| ||  ||||||| |||| |||||||||||||  ||| || ||||||||||||| || |||||||||||||||||||    
T  8423665 gcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgt 8423751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 29205532 - 29205470
Alignment:
Q  164 gtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||||||||||||| |||| || ||| ||||||||||||||||||||||||||||||||    
T  29205532 gtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgt 29205470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 35157932 - 35158018
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| || |||||| | |||||||||||| ||||| |||| || || ||||||||||||| |||||||||| ||||||||    
T  35157932 gcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgt 35158018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 42640636 - 42640555
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||| |||||| |||||||| |||| | |||| |||||||||||     |||||||||||||||||||||||||||||||||||    
T  42640636 gcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgt-----ccgacaccgacacttgtaattacactgaattatgt 42640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 715552 - 715640
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || | |  |||||| ||||||||||||||||||||||||||    
T  715552 gcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgt 715640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 752878 - 752966
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || | |  |||||| ||||||||||||||||||||||||||    
T  752878 gcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgt 752966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 16073502 - 16073421
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatg 225  Q
    |||||||||| |||||||| ||||    |||||||||| || | || |||||||||||||||||||||||||||||||||||    
T  16073502 ggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatg 16073421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 34306767 - 34306828
Alignment:
Q  156 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacact 217  Q
    ||||||| ||||  ||||||||||||||||| || |||||||||||||||||||||||||||    
T  34306767 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 34306828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 30982814 - 30982878
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||| || || |||||||||||    
T  30982814 gcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 9996936 - 9996866
Alignment:
Q  156 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||| |||||||||||||||| | || |||||||| || | |||||| ||||||||||||    
T  9996936 gattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgt 9996866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 12797285 - 12797371
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||| |||| |||||||   ||| |||||||| |||| || | || ||||||||||||||||||||||||||||||||||||    
T  12797285 gcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgt 12797371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 12895221 - 12895307
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| |||||||| |||||||| |||| ||| ||||||| || ||| || |||||||||||||||| |||||||||  ||||||||    
T  12895221 gcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgt 12895307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 54580006 - 54580056
Alignment:
Q  176 cggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgt 54580056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 4157543 - 4157462
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||| | |||||| || |  |||||||||||| |||| || |||||||||||||||||||||| |||| ||||||||    
T  4157543 gacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgt 4157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 40481743 - 40481662
Alignment:
Q  150 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccg-----acacttgtaattacactgaattatgt 226  Q
    |||| |||||| ||||||| ||||||||||||||||| || ||| ||||||     ||||||||||||||||||||||||||    
T  40481743 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgt 40481662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 5414108 - 5414172
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||||||| |||||||| || ||||| ||||||||| || |||||||| |||||    
T  5414108 gcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 848073 - 848015
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacacc 199  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| | || |||||||||    
T  848073 cacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacacc 848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 20743213 - 20743259
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 186  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  20743213 gcacggacactcatcggattagatgtgttccggtgtcggacacgtgt 20743259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 28084636 - 28084548
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt--tgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| || |||||||||||||||     |  |||||| |||||||||||||||| ||||||||||    
T  28084636 gcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgacacgacacagacacttgtaattacattgaattatgt 28084548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 30299006 - 30298973
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgt 30298973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 30327874 - 30327841
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgt 30327841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 53381537 - 53381602
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt-tgtatccgacaccgacac 204  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||| ||  || ||||||||||||||    
T  53381537 gcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 15724498 - 15724554
Alignment:
Q  148 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||| |||||||| |||||  |||||| |||||||||||| ||||||||||||||    
T  15724498 actcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacac 15724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 19482791 - 19482727
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||||| || ||| | ||||||||    
T  19482791 gcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacac 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 6879463 - 6879498
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6879463 tccgacaccgacacttgtaattacacttaattatgt 6879498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 482194 - 482271
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||| | |||||||  |||||| |||||| |||||||||     |||||||||||| || |||||||||||||||||||    
T  482194 ggacactcatcggattagacgtgttcaggtgtcagacacgtgt-----ccgacaccgacagttataattacactgaattatgt 482271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 18966621 - 18966567
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccg 194  Q
    ||||||||||||||| ||||||| || | ||| ||||||||||||||||| ||||    
T  18966621 gcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 224
Target Start/End: Original strand, 28000743 - 28000773
Alignment:
Q  194 gacaccgacacttgtaattacactgaattat 224  Q
    |||||||||||||||||||||||||||||||    
T  28000743 gacaccgacacttgtaattacactgaattat 28000773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 11596352 - 11596385
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||| ||||||||||||||||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgt 11596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 11931403 - 11931362
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggaca 181  Q
    ||||||||||||| |||||||||||||| | |||||||||||    
T  11931403 gcacggacactccatggattaggtgtgtcctggtgtcggaca 11931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 12324032 - 12323967
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacact 205  Q
    |||||||||||||| |||| ||||||||||| ||| |  ||||||||  | |||||||||||||||    
T  12324032 gcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacact 12323967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 17876278 - 17876237
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggaca 181  Q
    |||| ||||||||||||||||||||||| | |||||||||||    
T  17876278 gcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 21873306 - 21873355
Alignment:
Q  137 tatgcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 186  Q
    |||||||  ||||||||||||||||  |||| ||||||||||||||||||    
T  21873306 tatgcacaaacactccttggattagacgtgtcccggtgtcggacacgtgt 21873355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 21929167 - 21929216
Alignment:
Q  137 tatgcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 186  Q
    |||||||  ||||||||||||||||  |||| ||||||||||||||||||    
T  21929167 tatgcacaaacactccttggattagacgtgtcccggtgtcggacacgtgt 21929216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 7424765 - 7424722
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttg 188  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||    
T  7424765 ggacactccttggattaggcgtg-tacggtgtcggacacgtgttg 7424722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 22234826 - 22234890
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||| ||||| || ||||||| ||||| | |||||||||||||||| || || |||||||||||    
T  22234826 gcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 40784065 - 40784029
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtc 176  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  40784065 gcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 18190061 - 18190141
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||| ||||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgt 18190141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 18337441 - 18337355
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||| |||  ||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18337441 gcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgt 18337355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 51410129 - 51410051
Alignment:
Q  148 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||| ||||  |||||||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  51410129 actccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 51410051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 22515834 - 22515920
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| ||||  |||||||||| | |||| || ||||||||||||||||||||||||||| ||||||||    
T  22515834 gcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgt 22515920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 37598943 - 37598861
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||||||||||||| |||||||| |||| ||  |||||||||||||| || |||||||||||||||| |||||||||||||||    
T  37598943 gcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt 37598861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 40258884 - 40258966
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| |||||||| |||| | ||||||||||| |||| || || |||||||||||||||||||||||||||||||||    
T  40258884 ggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgt 40258966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 42359396 - 42359478
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||||||||||||| |||||||| |||| ||||||||||||||  ||  | ||||||||||||||||||||||||||||||||    
T  42359396 gcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaatt 42359478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 1815368 - 1815283
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| |||||||  ||||||| |||| ||||||||||||| |||| || || |||||||||||||||||||||||||||||||||    
T  1815368 cacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgt 1815283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 46348330 - 46348414
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||||||| ||| |||| ||| ||||  ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||    
T  46348330 gcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattat 46348414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 40181976 - 40181897
Alignment:
Q  147 cactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||| |||||||| |||| ||||||| ||||||||||||| ||||||||||| || | |||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgt 40181897  T

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Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1486651 - 1486742
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||||||||| |||||||| |||| |||||||||||||||||| || ||     |||||||||||||| |||||||||||||||||||    
T  1486651 gcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgt 1486742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 19562567 - 19562626
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacac 19562626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 5898213 - 5898299
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||  |||| ||||||| |||||||||| || || ||||||||| | | |||||||||||||||||||    
T  5898213 gcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgt 5898299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 18471405 - 18471326
Alignment:
Q  142 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||| | |||||||||||| ||||||||||||||||| || |     ||||||||||||||||| ||||||||||||    
T  18471405 acggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgt-----accgacacttgtaattatactgaattatgt 18471326  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 1704946 - 1705025
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||| ||||  |||||||||||||||  || |  |||||||||||||||||||||| |||||||||||    
T  1704946 ggacactccttggattaggcgtgtctcggtgtcggacacgt--tg-acacgacaccgacacttgtaattaccctgaattatgt 1705025  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 38078616 - 38078694
Alignment:
Q  148 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||| |||| | ||||| | ||| |||| || ||||||||||||||||||||||||| ||||||||||    
T  38078616 actcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgt 38078694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 19058854 - 19058890
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgtt 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  19058854 tccgacaccgacacttgtaattacactgaattatgtt 19058890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 31694646 - 31694710
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||  ||||||| |||||||||||||| | | ||||||| ||||||||||||||    
T  31694646 gcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 32461400 - 32461464
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||| ||||||||||| |||| || ||||| ||||||||| || ||||||||||||||    
T  32461400 gcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 40917872 - 40917808
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||| |||| |||||||| |||| |||||||||||||||||| || ||| ||||||||||    
T  40917872 gcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 2896072 - 2896154
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||| |||||||||||||||| ||||| |||||||| ||| || || ||||||||||  | ||  |||||||||||||||    
T  2896072 ggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgt 2896154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 21378642 - 21378604
Alignment:
Q  188 gtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21378642 gtatccaacaccgacacttgtaattacactgaattatgt 21378604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 225
Target Start/End: Original strand, 24334703 - 24334737
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatg 225  Q
    |||||||||||||||||||||||||||||||||||    
T  24334703 tccgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 6612171 - 6612204
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgt 6612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 15323275 - 15323234
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgt 186  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  15323275 gacactcctcggattaggtgtgtttcggtgtcggacacgtgt 15323234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 24577186 - 24577219
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgt 24577219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 47989556 - 47989523
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatgt 47989523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 9828167 - 9828103
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||  |||| |||||||||||||||||| || || ||||| |||||    
T  9828167 gcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 25934739 - 25934675
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||||||| ||| || | || ||||| ||||||||| || ||||||||||||||    
T  25934739 gcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 39130718 - 39130798
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||||| |||||||| | |||| ||  |||||  |||||||||| |||||||||||||| | |||||||||| ||||||    
T  39130718 ggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacacatataattacactaaattat 39130798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 43492456 - 43492524
Alignment:
Q  155 ggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 223  Q
    |||||||| |||| ||||||||||||| ||||||| || |||||||||||   ||||||||| ||||||    
T  43492456 ggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaatta 43492524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 47989620 - 47989556
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||| |||| ||| |||| |||| |||| || ||||||||||||||    
T  47989620 gcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 16297228 - 16297312
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacacc---gacacttgtaattacactgaatt 222  Q
    |||||||||||||| |||||||| |||| | ||||||||||||  || || |||||||||   |||| ||||||||||||||||||    
T  16297228 gcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaatt 16297312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 22881614 - 22881649
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22881614 tccgacaccgacacttgtaattacactaaattatgt 22881649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 41877468 - 41877503
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||| ||||||||    
T  41877468 tccgacaccgacacttgtaattacactaaattatgt 41877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 46940755 - 46940798
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacg 183  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||    
T  46940755 gcacgaacactcctcggattaggcgtgttccggtgtcggacacg 46940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 5376500 - 5376534
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgtt 227  Q
    |||||||||||||| ||||||||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgtt 5376534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 10577682 - 10577760
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 218  Q
    ||||||||||||||||||| ||| |||| || ||||| |||||| || || |||| | ||||||| | |||||||||||    
T  10577682 gcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactg 10577760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 26830699 - 26830614
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||  ||||||| |||| ||||| ||| |||||||| || || |||| |||||||| |||||||| | ||||||||    
T  26830699 gcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgaca-cgacacttataattacatttaattatgt 26830614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 224
Target Start/End: Original strand, 28273089 - 28273119
Alignment:
Q  194 gacaccgacacttgtaattacactgaattat 224  Q
    |||||||||||||||||||||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattat 28273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 29144327 - 29144369
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacac 182  Q
    |||||||||||| | |||||||| |||||||||||||||||||    
T  29144327 gcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 31015140 - 31015069
Alignment:
Q  149 ctccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||| ||| |||| ||||||||| || ||||||||      ||||||||||||||||||||||    
T  31015140 ctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgt 31015069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 113358 - 113325
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||| ||||||||||||||||||||||||||    
T  113358 cgacacctacacttgtaattacactgaattatgt 113325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 2218298 - 2218265
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||| ||||||||    
T  2218298 cgacaccgacacttgtaattacactaaattatgt 2218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 5944342 - 5944309
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||||||||||||||    
T  5944342 cgacaccgacacttataattacactgaattatgt 5944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 6332729 - 6332696
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||| ||||||||||||||||||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgt 6332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 30173762 - 30173795
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||| ||||||    
T  30173762 cgacaccgacacttgtaattacactgagttatgt 30173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 31694710 - 31694743
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||| ||||||||||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgt 31694743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 5927287 - 5927371
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||||||||  |||||||  |||| || |||||||||  |||  | |||||||| |||||||||||||||| | ||||||    
T  5927287 gcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattat 5927371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 5944406 - 5944342
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||| |||||||| |||||||| || | ||||||||||||| ||||||| |||| || ||||||    
T  5944406 gcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacac 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 6427587 - 6427531
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgac 196  Q
    |||||||||||| |  ||||||| |||| |||||||||||||||||| || ||||||    
T  6427587 gcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 11605898 - 11605966
Alignment:
Q  156 gattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||||||||||||||| |||| || |  |||| || ||| |||| ||||||| |||||||||||    
T  11605898 gattaggtgtgttccggtgtcagacatgtatcatatctgataccaacacatgtaatttcactgaattat 11605966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 31672893 - 31672925
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaatta 223  Q
    ||||||||||| |||||||||||||||||||||    
T  31672893 tccgacaccgagacttgtaattacactgaatta 31672925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 55401187 - 55401101
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| ||||  ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  55401187 gcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgt 55401101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 15999955 - 16000050
Alignment:
Q  138 atgcacggacactccttggattaggtgtgttccggtgtcggacacgtgt--tgta----tccgacaccgacacttgtaattacactgaattatgtt 227  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||    ||||||||||||||||||| |||||||||||||||||    
T  15999955 atgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgtt 16000050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 20503577 - 20503491
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| |||||||| |||| |||| || ||| ||||||||||||||||||||||||||||||||    
T  20503577 gcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgt 20503491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 28918111 - 28918027
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||| |||| || ||||||||||||||| || |||  |||||||||||||||||||||||||||||||||    
T  28918111 ggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgt 28918027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 7171607 - 7171529
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||||||||||| ||||  ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattat 7171529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 10955056 - 10954978
Alignment:
Q  148 actccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||| |||| || ||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgt 10954978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 40993286 - 40993368
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| |||||||| |||| ||||||||||||| |||| || |||||||||||||| | |||||||||||||||||||    
T  40993286 ggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgt 40993368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 18427060 - 18426975
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||  |||||||||||| |||||| ||||||||||| ||||||||||||||||  | ||||||||| |||||||||    
T  18427060 cacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgt 18426975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 51206300 - 51206386
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||  || | |||||||||||| ||   ||| ||||||||||||||||||| ||||||||||||||||    
T  51206300 gcacggacactccttggattagaggtatcccggtgtcggacgcgacatgtgtccgacaccgacacttgtatttacactgaattatgt 51206386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 11252088 - 11252004
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||||||||| |||||||| |||||||| || |||||||||||||| || |||||||||||   |||||||||||||||||||    
T  11252088 gcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac--ataattacactgaattatgt 11252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 25775619 - 25775535
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| |||||||| |||||||| |||| | |||||||||||||   |||  |||||||||||||||||||||||||||||||||||    
T  25775619 gcacgaacactcctcggattaggcgtgtcctggtgtcggacacgacgtgt--ccgacaccgacacttgtaattacactgaattatgt 25775535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 27505363 - 27505272
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||||| || ||     ||||||||||||||||||||||||| ||||||||    
T  27505363 gcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgt 27505272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 15796230 - 15796294
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||| |||||| |||||||||| |||||||||||| ||||||||||||| ||||||||| ||||    
T  15796230 gcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacac 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 3631796 - 3631710
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| ||| |||| |||| | ||||||||||| |||| || |||||||| | ||| | |||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgt 3631710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 4987229 - 4987291
Alignment:
Q  142 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| || ||| ||||||||||    
T  4987229 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 14209236 - 14209172
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||| |||||||||||||| | ||| ||||| |||||||| || ||||||||||||||    
T  14209236 gcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 13845472 - 13845550
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 218  Q
    ||||||||||||||||||| ||| ||||  | ||||| ||||||| | || |||||||||||||| | |||||||||||    
T  13845472 gcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactg 13845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 25093582 - 25093532
Alignment:
Q  172 gtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||||||||| ||||||| |||||||||||||| | |||||||||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatt 25093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 35223050 - 35222964
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||| | | |||| || ||||| |||||||||  | |||||||||||||| | |||||||| ||||||||||    
T  35223050 gcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgt 35222964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 3865749 - 3865700
Alignment:
Q  177 ggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| || || |||||||||||||||||||| ||||||||||||    
T  3865749 ggacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgt 3865700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 8789495 - 8789583
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgtt--gtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| ||||  ||||||| |||| ||||   || |||||||||||||| | ||||||||| |||||||||    
T  8789495 gcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgt 8789583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 41961586 - 41961650
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||| || |||||||| |||| || ||||||||||||||| || ||||| ||||||||    
T  41961586 gcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 55213085 - 55213021
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||| ||| ||||||||| | ||||  ||||||||||||||||||||  |||||||||||||    
T  55213085 gcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac 55213021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 8039324 - 8039265
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtg-ttgtatccgacaccgacac 204  Q
    |||||||||||||||||||||| |||| |||||||||| | |||||| |||||| |||||    
T  8039324 acactccttggattaggtgtgtcccggagtcggacacgcgtttgtattcgacactgacac 8039265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 8587019 - 8587054
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||| ||||||||    
T  8587019 tccgacaccgacacttgtaattacacttaattatgt 8587054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 8593198 - 8593163
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8593198 tccgacaccgacacttgtaattatactgaattatgt 8593163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 24204988 - 24205074
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt-tgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| | |||||| |||| | ||||||||||||| ||  || ||||||| |||||||| ||||||||||| |||||||    
T  24204988 gcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatgt 24205074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 26492183 - 26492234
Alignment:
Q  171 ggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||||| |||| |||| || ||||||||||| ||||||||||||||||||||    
T  26492183 ggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaatt 26492234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 14217015 - 14216957
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 198  Q
    ||||||||||| || ||||||||||||| || |||||| |||||||| || ||||||||    
T  14217015 gcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 14223144 - 14223086
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac 198  Q
    ||||||||||| || ||||||||||||| || |||||| |||||||| || ||||||||    
T  14223144 gcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 15505775 - 15505821
Alignment:
Q  178 gacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||| ||||||| ||||||||| |||||| |||||||||||||||||    
T  15505775 gacatgtgttgtgtccgacaccaacacttataattacactgaattat 15505821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 23657849 - 23657767
Alignment:
Q  142 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||||||  | ||||||||||||| ||||| |||||||  |||  | ||||||||||| | || |||||||||||||||||    
T  23657849 acggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattat 23657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 26508166 - 26508136
Alignment:
Q  196 caccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgt 26508136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 34185059 - 34185101
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacac 182  Q
    |||||||||||||| |||||||| |||| ||||||||||||||    
T  34185059 gcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 1509598 - 1509565
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||| ||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgt 1509565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 4990967 - 4991000
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| |||||||||||||||||||||||||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgt 4991000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 8383318 - 8383285
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattat 224  Q
    |||||||||||||||| |||||||||||||||||    
T  8383318 tccgacaccgacacttataattacactgaattat 8383285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 12100381 - 12100297
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||| ||||||| ||| ||||||||| ||||||||||||||| ||| || || |||| |||||| | | |||||||||||||||    
T  12100381 gcacgggcactcctcggactaggtgtgtcccggtgtcggacacgcgttagtgtcagaca-cgacacctattattacactgaattat 12100297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 12704598 - 12704663
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacac 204  Q
    |||||||||||||| |||||||  |||||| ||||||||||| | ||| || ||||||||||||||    
T  12704598 gcacggacactcctaggattagacgtgttctggtgtcggacatgcgttggtgtccgacaccgacac 12704663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 25074907 - 25074842
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacac 204  Q
    ||||| |||||||| ||||||||||||| || |||||||||||| ||| || || |||||||||||    
T  25074907 gcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacac 25074842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 28812574 - 28812541
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||| |||||||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgt 28812541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 34185123 - 34185152
Alignment:
Q  193 cgacaccgacacttgtaattacactgaatt 222  Q
    ||||||||||||||||||||||||||||||    
T  34185123 cgacaccgacacttgtaattacactgaatt 34185152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 34910376 - 34910343
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| |||||||||||||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgt 34910343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 37077482 - 37077441
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggaca 181  Q
    ||||||||| |||||||||||||||||| || ||||||||||    
T  37077482 gcacggacattccttggattaggtgtgtccccgtgtcggaca 37077441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 49651786 - 49651819
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||| ||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgt 49651819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 4466547 - 4466631
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||||||||||| | || ||  |||| || ||||||||||| | ||||||||||||||| ||| | ||  |||||||||||||    
T  4466547 gcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattat 4466631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 226
Target Start/End: Complemental strand, 35312108 - 35312080
Alignment:
Q  198 ccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||||||    
T  35312108 ccgacacttgtaattacactgaattatgt 35312080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 40052424 - 40052380
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgt 184  Q
    ||||| |||||||| |||||||| |||| ||||||||||||||||    
T  40052424 gcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 9778617 - 9778526
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||     ||||||||||||||||||||| ||||||||||||    
T  9778617 gcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgt 9778526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 13770808 - 13770717
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacac-----cgacacttgtaattacactgaattatgt 226  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||     ||||||||||||||||||||||||||||    
T  13770808 gcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgt 13770717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 21880264 - 21880178
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| || |||||||| |||| | ||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  21880264 gcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 21880178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 5409778 - 5409869
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||| || ||     |||||||||||||||||||| |||||||||||||    
T  5409778 gcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgt 5409869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 15680921 - 15680835
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| | |||||  ||||  ||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||    
T  15680921 gcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgt 15680835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 32287410 - 32287496
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||  | |||||||||||||| | || || |||||||||||||    
T  32287410 gcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgt 32287496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 33994323 - 33994238
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||||||||||||||||| ||||  |||||| ||||| |||| || || ||||||||||||||||||| |||||||||||||    
T  33994323 cacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgt 33994238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 21864920 - 21864836
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||| ||||||||| | |||||  |||| |||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  21864920 gcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattat 21864836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 24105784 - 24105709
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaat 221  Q
    |||||||| || ||||| |||| |||||||||||||| ||||||  ||||| ||||||||||||||||||||||||    
T  24105784 acactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaat 24105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 7197273 - 7197327
Alignment:
Q  169 ccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 223  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  7197273 ccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaatta 7197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 8234245 - 8234171
Alignment:
Q  153 ttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgtt 227  Q
    |||||||||| ||||  |||||||||||| |||| || |||||||||| ||||||||| ||||||||||||||||    
T  8234245 ttggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgtt 8234171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 598320 - 598245
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 215  Q
    ||||||||||| || |||||||| |||| |||||||||||||||||| || || |||||||||||||  |||||||    
T  598320 gcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattaca 598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 12278943 - 12278861
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgtt-gtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||| || ||||||| |||||| | |||||||||||||||||||    
T  12278943 ggacactcctaggattaggtgtgtcccggtgtcagacacgcgttggtgtccgaca-cgacacatataattacactgaattatgt 12278861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 20549903 - 20549820
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatta 223  Q
    |||||| ||||||| |||||||| ||||  |  ||||||||| ||||||| |||||||||||||| | ||||||||||||||||    
T  20549903 gcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatta 20549820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 43027411 - 43027502
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||| | |||||||| |||| |||||||||||||||||| || ||     ||||||||||||||||| |||||||| |||||||    
T  43027411 gcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgt 43027502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 40287309 - 40287385
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaat 221  Q
    |||||||||||||| ||||||||  ||| |||||||||||||     ||| ||||| |||||||||||||||||||||||||    
T  40287309 gcacggacactcctcggattaggcatgtcccggtgtcggaca-----tgtgtccgataccgacacttgtaattacactgaat 40287385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 24339765 - 24339701
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||| ||||||| |||||||| |||| ||||||||||| |||||| || ||||||||||||||    
T  24339765 gcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 32093961 - 32094053
Alignment:
Q  140 gcacggacactccttggattaggtgtgttcc-ggtgtcggacacgtgttgtatc-----cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| |||||||| |||||||| |||| || |||||||||||||||| || ||     ||||||||||| ||||||||||||||||||||||    
T  32093961 gcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgt 32094053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 1401131 - 1401051
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||  |||||||||||| ||| |||||||||  ||| || || |||||||| |||| |||||||||||||||||||    
T  1401131 ggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatacttataattacactgaattatgt 1401051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 25482014 - 25481928
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||| |||| ||| |||| | ||||| |  |||||||||| | | || ||||||||| ||||||||||||||||||||||||||    
T  25482014 gcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgt 25481928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 18039058 - 18039025
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgt 18039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 21560562 - 21560529
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgt 21560529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 24339701 - 24339668
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgt 24339668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 26733411 - 26733330
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||| |||||||| ||||||| || ||||||| | || || |||||||||||||| | |||||| ||||||||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgt 26733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 27945100 - 27945067
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgt 27945067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 224
Target Start/End: Original strand, 11272586 - 11272617
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattat 224  Q
    ||||||||||||||||||||||||||||||||    
T  11272586 cgacaccgacacttgtaattacactgaattat 11272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 11665376 - 11665439
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca 203  Q
    ||||||||| |||| | ||||| |||||| ||||||||||||||||| || | |||||||||||    
T  11665376 gcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgaca 11665439  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 26033398 - 26033461
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||| |||||||||||||  |||| ||||||||||||  | || |||||||||||    
T  26033398 cacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacac 26033461  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 28155631 - 28155596
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||| |||||||||    
T  28155631 tccgacaccgacacttgtaattacaccgaattatgt 28155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 17852112 - 17852066
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 186  Q
    |||||||||||||| | |||||||||||  |||||||||||||||||    
T  17852112 gcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgt 17852066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 18035812 - 18035897
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||  ||||||| ||||| |||| ||||  ||||  |||| ||||| ||||||||| |||||||||||    
T  18035812 gcacggacactcctcggattagacgtgttcc-gtgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatgt 18035897  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 2334309 - 2334276
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||| ||||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgt 2334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 3991383 - 3991350
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||| ||||||||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgt 3991350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 8842286 - 8842323
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcg 177  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  8842286 gcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 9408334 - 9408367
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||| ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgt 9408367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 21930736 - 21930687
Alignment:
Q  155 ggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||||||| ||||||||||| |||| ||| |||| |||||    
T  21930736 ggattaggtgtgttccggcgtcggacacgtcttgtgtccaacactgacac 21930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 22868155 - 22868110
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgt 189  Q
    |||||||||| |||||| |||||| |||||||| ||||||||||||    
T  22868155 ggacactcctcggattatgtgtgtcccggtgtctgacacgtgttgt 22868110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 25822714 - 25822685
Alignment:
Q  193 cgacaccgacacttgtaattacactgaatt 222  Q
    ||||||||||||||||||||||||||||||    
T  25822714 cgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 226
Target Start/End: Original strand, 26033465 - 26033494
Alignment:
Q  197 accgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgt 26033494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 7438764 - 7438732
Alignment:
Q  194 gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||| ||||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgt 7438732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 40332302 - 40332217
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||| |||||||| | || ||||||| |||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  40332302 cacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgt 40332217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 15023208 - 15023288
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||||||| |||||||  ||||||| |  |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  15023208 ggacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 5813704 - 5813618
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||   |||||| |||| |||||||||||||||||| || ||||||||||||||||||| ||||||| || |||||    
T  5813704 gcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgt 5813618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 31557104 - 31557022
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||||||| |||| | ||||||||||| |||| || || |||||||| ||||||||||||||||||||||||    
T  31557104 ggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgt 31557022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 36450701 - 36450783
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||| ||||||||| |||||||| |||| | ||||||||||||| || || ||||||||| ||||||||||||||||||||||    
T  36450701 gcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaatt 36450783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 29510240 - 29510305
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacact 205  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| || || |||||||||||||||    
T  29510240 gcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacact 29510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 20679346 - 20679428
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||| || | ||| |||| ||||||||||||||||||||  || ||||||||||||| ||||||||||||| |||||    
T  20679346 ggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgt 20679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 4498415 - 4498342
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaatta 213  Q
    ||||||||||||||  ||||||||||||| |||||||||| || |||| ||| |||||||||||||| ||||||    
T  4498415 gcacggacactcctctgattaggtgtgtttcggtgtcggatacatgttatattcgacaccgacacttataatta 4498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 926735 - 926815
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaa 220  Q
    |||||||||||||| |||| | |  ||| |||||||||||||||||| |  |||||||||||||||| |||||||||||||    
T  926735 gcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaa 926815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 3025663 - 3025577
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||  ||||  | ||||| ||||||||| || |||||||| ||||| | |||||||||||||||||||    
T  3025663 gcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgt 3025577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 3951483 - 3951561
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 218  Q
    ||||||| ||||||||||||||| ||||||| ||||| ||||||||| || || ||||||||||| | ||| |||||||    
T  3951483 gcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactg 3951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 18407831 - 18407745
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||   |||||| |||| |  |||||||||| |||| || |||| || ||||||||||||||||||||||||||||    
T  18407831 gcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgt 18407745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 33405331 - 33405417
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||| |||||||||  |||| | |||||| |||| |||| || |||||||||||||| | |||||||||| ||||||||    
T  33405331 gcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgt 33405417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 20873151 - 20873095
Alignment:
Q  170 cggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| |||||||||| | || ||||||||||||||||||||||||||| ||||||||    
T  20873151 cggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgt 20873095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 22652099 - 22652035
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||  |||| |||||||||||||| ||| || ||||||||||||||    
T  22652099 gcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 34450968 - 34451032
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||||||||| ||| |||| || ||||| ||||||||| || ||||||||||||||    
T  34450968 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 4948713 - 4948678
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||||    
T  4948713 tccgacaccgacacttgtaattacactgaattatgt 4948678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 22596070 - 22596019
Alignment:
Q  176 cggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgtt 227  Q
    ||||||||||| |  ||||||||| |||||||||||||||||||||||||||    
T  22596070 cggacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgtt 22596019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 24205756 - 24205819
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||||| |||||||| ||||||||||||| |||| | ||||| | ||||||||||||    
T  24205756 cacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacac 24205819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 8343079 - 8342998
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||||||| | |||||||| |||| |||||||||||||| |||      ||||||||||||||||||||||||| ||||||||    
T  8343079 gcacagacactcttcggattaggcgtgtcccggtgtcggacacatgta-----cgacaccgacacttgtaattacactaaattatgt 8342998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 8798804 - 8798842
Alignment:
Q  144 ggacactccttggattaggtgtgttccggtgtcggacac 182  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  8798804 ggacactccttggattaggcgtgttccggtgtcggacac 8798842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 26434292 - 26434206
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| |||||| |||| |||| |||||||  ||||| |||||||| |||| ||| |||||||||||| |||||| | ||||||||||    
T  26434292 gcacagacacttcttgaattatgtgtgttttggtgttggacacgtattgtgtccaacaccgacacttttaattatattgaattatgt 26434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 30077382 - 30077420
Alignment:
Q  188 gtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30077382 gtatccgacacggacacttgtaattacactgaattatgt 30077420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 43737758 - 43737836
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactg 218  Q
    ||||||||||||||||||| ||| || | || ||||| ||||| ||| || |||||||||||||| | |||||||||||    
T  43737758 gcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactg 43737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 6065593 - 6065650
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgaca 197  Q
    |||||||||||||||| |||| | |||||||||||||||||| |||| || |||||||    
T  6065593 gcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 14134810 - 14134725
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||| | |||||| |||| | |||| ||||||||||| || |  ||||||||||  | |||||||||||||||||||    
T  14134810 cacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgt 14134725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 24669492 - 24669459
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgt 24669459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 25566900 - 25566867
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgt 25566867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 31580080 - 31580160
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||| |||||||||||||| |||||||| ||| |||| |  ||||||| |||||| | |||||||||| ||||||||    
T  31580080 acacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgt 31580160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 4673361 - 4673400
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcgga 179  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  4673361 gcacagacactccttggattaggcgtgttccggtgtcgga 4673400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 4786324 - 4786371
Alignment:
Q  179 acacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    |||| ||| ||||||||||||||||| | |||||||||||||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgt 4786371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 24613581 - 24613546
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||| ||||||||    
T  24613581 tccgacaccgacacttgtaattacacttaattatgt 24613546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 29447046 - 29447109
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca 203  Q
    |||||||||||||| |||||||| |||| | |||||| ||||| ||| || |||||||||||||    
T  29447046 gcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 126295 - 126369
Alignment:
Q  141 cacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 215  Q
    ||||||||||||| |||||||  |||| ||||| | |||||||||| || |||||||| ||||| | ||||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 22197678 - 22197724
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgt 186  Q
    ||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  22197678 gcacggacactcctcagattaggcgtgatccggtgtcggacacgtgt 22197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 24413506 - 24413592
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| || |||||||  |||| ||| ||| |||||||  | || |||||||| ||||||| ||||||| |||||||||||    
T  24413506 gcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgt 24413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 225
Target Start/End: Original strand, 30271253 - 30271287
Alignment:
Q  191 tccgacaccgacacttgtaattacactgaattatg 225  Q
    |||||||||||||||||||||||||||| ||||||    
T  30271253 tccgacaccgacacttgtaattacactgcattatg 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 40064074 - 40064032
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacac 182  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||    
T  40064074 gcacggacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 2572056 - 2572089
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||| ||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgt 2572089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 181
Target Start/End: Original strand, 14513127 - 14513156
Alignment:
Q  152 cttggattaggtgtgttccggtgtcggaca 181  Q
    ||||||||||||||||||||||||||||||    
T  14513127 cttggattaggtgtgttccggtgtcggaca 14513156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 22943301 - 22943342
Alignment:
Q  145 gacactccttggattaggtgtgttccggtgtcggacacgtgt 186  Q
    ||||||||| |||||||| |||| ||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgt 22943342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 11803382 - 11803318
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||  |||| || |||||||||| |||| |||||| ||||| ||||    
T  11803382 gcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacac 11803318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 15816065 - 15816129
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||| || |||||||| |||| |||||||||||  ||||| || ||||||||| ||||    
T  15816065 gcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 34127179 - 34127215
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtc 176  Q
    |||||||||||||||||||||||||||| | ||||||    
T  34127179 gcacggacactccttggattaggtgtgtccaggtgtc 34127215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 70390 - 70303
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgtt 227  Q
    ||||| |||||| | ||||||||  ||| | |||||||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  70390 gcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtt 70303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 45477 - 45563
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||| || ||||||||||  |||  ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  45477 gcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 8910 - 8833
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacact 217  Q
    ||||||| ||||||  ||||||| ||||  ||||||||||||||||| || |||||||||||||||||||||||||||    
T  8910 gcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 14639 - 14556
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||| ||||||||| ||||||| ||||  ||||||||||||||||| || ||||||||   |||||||||||||||||||||||||    
T  14639 gcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgt 14556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 4828 - 4916
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatcc--gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||| |||| || |||||||||| |||| || | |  |||||| ||||||||||||||||||||||||||    
T  4828 gcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgt 4916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 71848 - 71784
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||| ||||||||| |||||||  |||| ||||||||||||||||||||| ||||||||||||||    
T  71848 gcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 174510 - 174586
Alignment:
Q  150 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||| |||||||| |||||||||| ||  || ||| ||||||||| |||||||||| |||||||||||    
T  174510 tccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgt 174586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 180023 - 180099
Alignment:
Q  150 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||| |||||||| |||||||||| ||  || ||| ||||||||| |||||||||| |||||||||||    
T  180023 tccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgt 180099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 90949 - 90871
Alignment:
Q  146 acactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaattat 224  Q
    |||||| |||||||||| |||||  ||||||||||||||||||| || |||| |||||  | |||||||||||||||||    
T  90949 acactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattat 90871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 13518 - 13426
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca------cttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||||| |  ||||| ||| ||||| || |||||||||||||      ||||||||| |||||||||||||    
T  13518 gcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgt 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 19682 - 19601
Alignment:
Q  150 tccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccg-----acacttgtaattacactgaattatgt 226  Q
    |||| |||||| ||||||| ||||||||||||||||| || ||| ||||||     ||||||||||||||||||||||||||    
T  19682 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgt 19601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 21809 - 21901
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgaca------cttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||||| |  ||||| ||| ||||| || |||||||||||||      ||||||||| |||||||||||||    
T  21809 gcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgt 21901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 3051 - 2987
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||| || || || ||||||||    
T  3051 gcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 241717 - 241653
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    ||||||||||| || |||||||| |||| |||||||||||||||||| || ||||||||| ||||    
T  241717 gcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 4983 - 5058
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 215  Q
    |||| ||||||||| ||||||||  |||  |  |||||||||||||| || |||||||||||||||||||||||||    
T  4983 gcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 3420 - 3338
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattacactgaatt 222  Q
    |||||||||||||| |||||||| |||| || |||||   |||||||  | |||||||| |||||||||||||||||| ||||    
T  3420 gcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 53304 - 53239
Alignment:
Q  139 tgcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||| |||||||||   |||| ||||||||||||||||||  | ||||||||||||||    
T  53304 tgcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 23829 - 23796
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||||||||||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgt 23796  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 123686 - 123654
Alignment:
Q  194 gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgt 123654  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 83219 - 83186
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| ||||||||||||||||||||||    
T  83219 cgacaccgacatttgtaattacactgaattatgt 83186  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 8713 - 8638
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacacttgtaattaca 215  Q
    ||||||||||||||||||||||| || | || ||||||||||||||| || | | |||| |||||  |||||||||    
T  8713 gcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacacgagtaattaca 8638  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 13534 - 13472
Alignment:
Q  142 acggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||| ||||||||||| | ||| ||||| | |||||| || ||||||||||||||    
T  13534 acggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 130538 - 130508
Alignment:
Q  196 caccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgt 130508  T

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Target: scaffold0722 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 7020 - 7065
Alignment:
Q  181 acgtgttgtatccgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||| ||||||||| ||||||||||||| ||| ||||||||    
T  7020 acgtgttgtgtccgacacctacacttgtaattatactaaattatgt 7065  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 20231 - 20198
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||||||||||||||||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgt 20198  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 23479 - 23446
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||| |||||||||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgt 23446  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 3849 - 3882
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    |||||| |||||||||||||||||||||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgt 3882  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 46741 - 46708
Alignment:
Q  193 cgacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||| ||||||||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgt 46708  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 8571 - 8635
Alignment:
Q  140 gcacggacactccttggattaggtgtgttccggtgtcggacacgtgttgtatccgacaccgacac 204  Q
    |||||||||||||| | |||||| |||| || ||||||||||||| | || ||||| ||||||||    
T  8571 gcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 63831 - 63799
Alignment:
Q  194 gacaccgacacttgtaattacactgaattatgt 226  Q
    ||||||||||||||||||| |||||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgt 63799  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 17750 - 17782
Alignment:
Q  194 gacaccgacacttgtaattacactgaattatgt 226  Q
    |||||||||||||||||||||||| ||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgt 17782  T

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