View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2706_high_7 (Length: 292)

Name: NF2706_high_7
Description: NF2706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2706_high_7
NF2706_high_7
[»] chr1 (9 HSPs)
chr1 (99-278)||(4472108-4472287)
chr1 (16-82)||(6411846-6411912)
chr1 (16-82)||(39639899-39639965)
chr1 (16-82)||(30108996-30109062)
chr1 (16-82)||(30107233-30107299)
chr1 (16-82)||(39638288-39638354)
chr1 (16-59)||(6406291-6406334)
chr1 (16-66)||(49617142-49617192)
chr1 (16-69)||(30344088-30344141)
[»] chr7 (10 HSPs)
chr7 (16-82)||(37168684-37168750)
chr7 (16-82)||(37632144-37632210)
chr7 (16-82)||(37632373-37632439)
chr7 (16-81)||(34831723-34831788)
chr7 (16-82)||(34828978-34829044)
chr7 (16-82)||(37172084-37172150)
chr7 (16-82)||(46047398-46047464)
chr7 (16-69)||(46489326-46489379)
chr7 (16-69)||(46484311-46484364)
chr7 (11-66)||(26844004-26844059)
[»] chr6 (6 HSPs)
chr6 (16-82)||(9664318-9664384)
chr6 (16-82)||(13649748-13649814)
chr6 (16-82)||(9663393-9663459)
chr6 (16-82)||(13653998-13654064)
chr6 (16-69)||(22028860-22028913)
chr6 (16-69)||(22022496-22022549)
[»] chr5 (18 HSPs)
chr5 (16-82)||(764363-764429)
chr5 (16-82)||(1381910-1381976)
chr5 (16-82)||(19426586-19426652)
chr5 (16-82)||(20084830-20084896)
chr5 (16-82)||(20091457-20091523)
chr5 (16-81)||(31910928-31910993)
chr5 (16-82)||(1378020-1378086)
chr5 (16-82)||(5956985-5957051)
chr5 (16-82)||(5957965-5958031)
chr5 (16-82)||(30820247-30820313)
chr5 (16-82)||(30826793-30826859)
chr5 (16-82)||(31910749-31910815)
chr5 (16-82)||(766913-766978)
chr5 (16-82)||(19420094-19420160)
chr5 (16-69)||(19685681-19685734)
chr5 (16-69)||(19678829-19678882)
chr5 (16-69)||(41372946-41372999)
chr5 (16-66)||(13827598-13827648)
[»] chr3 (8 HSPs)
chr3 (16-82)||(53135973-53136039)
chr3 (16-82)||(53345449-53345515)
chr3 (16-82)||(43196833-43196899)
chr3 (16-82)||(53135361-53135427)
chr3 (37-82)||(53346269-53346314)
chr3 (11-66)||(52606438-52606493)
chr3 (11-66)||(52609550-52609605)
chr3 (16-69)||(26527831-26527885)
[»] chr2 (16 HSPs)
chr2 (16-82)||(11745126-11745192)
chr2 (16-82)||(11752593-11752659)
chr2 (16-82)||(43800605-43800671)
chr2 (16-82)||(43804538-43804604)
chr2 (16-82)||(1245617-1245683)
chr2 (16-82)||(6901568-6901634)
chr2 (16-82)||(37013505-37013571)
chr2 (16-82)||(37020031-37020097)
chr2 (16-69)||(44339011-44339064)
chr2 (16-69)||(18812831-18812884)
chr2 (16-69)||(36626413-36626466)
chr2 (16-69)||(44332604-44332657)
chr2 (16-66)||(1734611-1734661)
chr2 (16-69)||(18814475-18814528)
chr2 (16-66)||(25367202-25367252)
chr2 (16-69)||(36631905-36631958)
[»] chr8 (6 HSPs)
chr8 (16-82)||(42607899-42607965)
chr8 (16-82)||(42614440-42614506)
chr8 (16-69)||(34362386-34362439)
chr8 (16-68)||(34362718-34362770)
chr8 (16-69)||(4390743-4390796)
chr8 (11-66)||(31304718-31304773)
[»] chr4 (4 HSPs)
chr4 (16-82)||(26196841-26196907)
chr4 (16-82)||(26252227-26252293)
chr4 (16-69)||(20174641-20174696)
chr4 (11-69)||(48465357-48465415)
[»] scaffold0636 (1 HSPs)
scaffold0636 (16-82)||(8982-9048)
[»] scaffold0773 (1 HSPs)
scaffold0773 (16-66)||(44-94)


Alignment Details
Target: chr1 (Bit Score: 176; Significance: 7e-95; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 99 - 278
Target Start/End: Original strand, 4472108 - 4472287
Alignment:
Q  99 ggccatggatcatttacaaaattacaattaaggaaggaaggaacacaaatttaattttgatctaactggcttattttaatgtgtttaaaaatcgtacttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4472108 ggccatggatcatttacaaaattacaattaaggaaggaaggaacacaaatttaattttgatctaactggcttattttaatgtgtttaaaaatcgtccttt 4472207  T
Q  199 gtaaatgagtttcaaggagcttaatatatttgcttattttcacttaaataaaccaaataatttgctaacaacataaaaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4472208 gtaaatgagtttcaaggagcttaatatatttgcttattttcacttaaataaaccaaataatttgctaacaacataaaaat 4472287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 6411846 - 6411912
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6411846 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 6411912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 39639899 - 39639965
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39639899 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 39639965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 30108996 - 30109062
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30108996 agtagggcatttatgcaatttttttcaaaattagggcatttttgtatttttggaattaaataagggc 30109062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 30107299 - 30107233
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  30107299 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 30107233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 39638354 - 39638288
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  39638354 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 39638288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 6406334 - 6406291
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttg 59  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  6406334 agtagggcatttatgcaatttttttcaaaactagggtatttttg 6406291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 49617192 - 49617142
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||||||||||| ||||||||||   |||| ||||||||||||||||||||    
T  49617192 agtagggcatttgtgcaatttttcgaaaaagtagggcatttttgtattttt 49617142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 30344141 - 30344088
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||    
T  30344141 agtaggacatttgtgcaattttttgcaaaagtgggacatttttgtatttttgga 30344088  T

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Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 37168750 - 37168684
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37168750 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 37168684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 37632210 - 37632144
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37632210 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 37632144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 37632373 - 37632439
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37632373 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 37632439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 34831723 - 34831788
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataaggg 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34831723 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataaggg 34831788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 34829044 - 34828978
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  34829044 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 34828978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 37172084 - 37172150
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  37172084 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 37172150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 46047464 - 46047398
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  46047464 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 46047398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 46489326 - 46489379
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    ||||||||||||||||||||||||  |||| | |||||||||||||||||||||    
T  46489326 agtagggcatttatgcaattttttgtaaaagtggggcatttttgtatttttgga 46489379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 46484364 - 46484311
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||| ||||| |  || |||||||||||||||||    
T  46484364 agtagggcatttatgcaattttttgcaaaaatgaggtatttttgtatttttgga 46484311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 26844059 - 26844004
Alignment:
Q  11 cagagagtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||| |||||||||||| |||||||||||  |||| | ||||||||||||||||||    
T  26844059 cagaaagtagggcatttgtgcaattttttgaaaaagtggggcatttttgtattttt 26844004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 9664318 - 9664384
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9664318 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 9664384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 13649814 - 13649748
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13649814 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 13649748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 9663459 - 9663393
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9663459 agtagggcatttatgcaattttttttaaaactagggcatttttgtatttttggaattaaataagggc 9663393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 13653998 - 13654064
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  13653998 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 13654064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 22028860 - 22028913
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  22028860 agtagggcatttatgcaattttttgcaaaagtggggcatttttgtatttttgga 22028913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 22022549 - 22022496
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||| ||||||||||| ||||| | |||||||||||||||||||||    
T  22022549 agtagggcatttgtgcaattttttgcaaaagtggggcatttttgtatttttgga 22022496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 764429 - 764363
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  764429 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 764363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 1381910 - 1381976
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1381910 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 1381976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 19426586 - 19426652
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19426586 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 19426652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 20084896 - 20084830
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20084896 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 20084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 20091457 - 20091523
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20091457 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 20091523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 31910928 - 31910993
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataaggg 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31910928 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataaggg 31910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 1378086 - 1378020
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1378086 agtagggcatttatgcaatttttttcaaaactagagcatttttgtatttttggaattaaataagggc 1378020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 5957051 - 5956985
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5957051 agtagagcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 5956985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 5957965 - 5958031
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5957965 agtagggtatttatgcaattttttttaaaactagggcatttttgtatttttggaattaaataagggc 5958031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 30820313 - 30820247
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  30820313 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 30820247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 30826793 - 30826859
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  30826793 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 30826859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 31910815 - 31910749
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31910815 agtaggacatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 31910749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 766913 - 766978
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  766913 agtagggcatttatgcaatttt-ttcaaaactagggtatttttgtatttttgaaattaaataagggc 766978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 19420160 - 19420094
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  19420160 agtagagcatttatgaaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 19420094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 19685681 - 19685734
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  19685681 agtagggcatttatgcaattttttgcaaaagtggggcatttttgtatttttgga 19685734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 19678882 - 19678829
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||| ||||| | |  ||||||||||||||||||    
T  19678882 agtagggcatttatgcaattttttgcaaaagtggaacatttttgtatttttgga 19678829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 41372999 - 41372946
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||| ||||||||||||||||| ||||| | |||||||||| ||||||||||    
T  41372999 agtaggacatttatgcaattttttgcaaaagtggggcatttttatatttttgga 41372946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 13827648 - 13827598
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||||||||||| ||||||||||   |||| ||||||||||||||||||||    
T  13827648 agtagggcatttttgcaatttttcgaaaaagtagggcatttttgtattttt 13827598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 53135973 - 53136039
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53135973 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 53136039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 53345515 - 53345449
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53345515 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 53345449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 43196833 - 43196899
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43196833 agtagggtatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 43196899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 53135427 - 53135361
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53135427 agtagggcatttatgcaattttttttaaaactagggcatttttgtatttttggaattaaataagggc 53135361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 53346269 - 53346314
Alignment:
Q  37 ttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||    
T  53346269 ttttcaaaagtggggcatttttgtatttttggaattaaataagggc 53346314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 52606493 - 52606438
Alignment:
Q  11 cagagagtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||| |||||||||||| |||||||||||  |||| | ||||||||||||||||||    
T  52606493 cagaaagtagggcatttgtgcaattttttgaaaaagtggggcatttttgtattttt 52606438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 52609550 - 52609605
Alignment:
Q  11 cagagagtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||| |||||||||||| |||||||||||  |||| | ||||||||||||||||||    
T  52609550 cagaaagtagggcatttgtgcaattttttgaaaaagtggggcatttttgtattttt 52609605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 26527831 - 26527885
Alignment:
Q  16 agtagggcatttatgcaatttt-tttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||| ||||||||| |||||||| |  ||||||||||||||||||||    
T  26527831 agtagggcatttgtgcaattttttttcaaaagtgaggcatttttgtatttttgga 26527885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 11745192 - 11745126
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11745192 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 11745126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 11752593 - 11752659
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11752593 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 11752659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 43800671 - 43800605
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43800671 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 43800605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 43804538 - 43804604
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43804538 agtagggcatttatgcaatttttttcaaaactaggacatttttgtatttttggaattaaataagggc 43804604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 1245617 - 1245683
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  1245617 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 1245683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 6901568 - 6901634
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  6901568 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 6901634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 37013571 - 37013505
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  37013571 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 37013505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 37020031 - 37020097
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  37020031 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 37020097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 44339011 - 44339064
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  44339011 agtagggcatttatgcaattttttgcaaaagtggggcatttttgtatttttgga 44339064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 18812884 - 18812831
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    ||||||||||||||||||||||||  |||| | |||||||||||||||||||||    
T  18812884 agtagggcatttatgcaattttttgtaaaagtggggcatttttgtatttttgga 18812831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 36626466 - 36626413
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  36626466 agtagggcatttatgcaattttttgcaaaagtgaggcatttttgtatttttgga 36626413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 44332657 - 44332604
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||| ||||||||||| ||||| | |||||||||||||||||||||    
T  44332657 agtagggcatttgtgcaattttttgcaaaagtggggcatttttgtatttttgga 44332604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 1734661 - 1734611
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    ||||||||||||||||||||||||||||||   ||||||||||| ||||||    
T  1734661 agtagggcatttatgcaatttttttcaaaaggggggcatttttggattttt 1734611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 18814475 - 18814528
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    ||||||||||| ||||| |||||| ||||| | |||||||||||||||||||||    
T  18814475 agtagggcattgatgcatttttttgcaaaagtggggcatttttgtatttttgga 18814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 25367202 - 25367252
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||||||||||| |||||||||||||||||   ||||||||||| ||||||    
T  25367202 agtagggcatttgtgcaatttttttcaaaaggggggcatttttggattttt 25367252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 36631905 - 36631958
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||| ||||||||||||||||| ||||| |   |||||||||||||||||||    
T  36631905 agtaggacatttatgcaattttttgcaaaagtgaagcatttttgtatttttgga 36631958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 42607965 - 42607899
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42607965 agtatggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 42607899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 42614440 - 42614506
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42614440 agtagggcatttatacaatttttttcaaaactagggtatttttgtatttttggaattaaataagggc 42614506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 34362439 - 34362386
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||| ||||||||||| ||||| | |||||||||||||||||||||    
T  34362439 agtagggcatttgtgcaattttttgcaaaagtggggcatttttgtatttttgga 34362386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34362718 - 34362770
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgg 68  Q
    |||||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  34362718 agtagggcatttgtgcaattttttgcaaaaatggggcatttttgtatttttgg 34362770  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 4390796 - 4390743
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||| ||||| |  ||||||||| ||||||||||    
T  4390796 agtagggcatttatgcaattttttgcaaaagtgaggcatttttatatttttgga 4390743  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 31304718 - 31304773
Alignment:
Q  11 cagagagtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||| ||||||| |||| |||||||||||  |||| ||||||||||||||||||||    
T  31304718 cagaaagtagggtatttgtgcaattttttgaaaaagtagggcatttttgtattttt 31304773  T

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Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 26196841 - 26196907
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26196841 agtagggcatttatgcaatttttttcaaaactagggcatttttatatttttggaattaaataagggc 26196907  T

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Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 26252227 - 26252293
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26252227 agtagggcatttatgcaattttttttaaaactagggcatttttgtatttttggaattaaataagggc 26252293  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 20174641 - 20174696
Alignment:
Q  16 agtagggcatttatgcaattttttt--caaaactagggcatttttgtatttttgga 69  Q
    |||||||||||||||||||||||||  ||||| || ||||||||||||||||||||    
T  20174641 agtagggcatttatgcaattttttttgcaaaagtaaggcatttttgtatttttgga 20174696  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 48465357 - 48465415
Alignment:
Q  11 cagagagtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttgga 69  Q
    |||| ||||||| |||| |||||||||||  |||| | |||||||||||||||||||||    
T  48465357 cagaaagtagggtatttgtgcaattttttgaaaaagtggggcatttttgtatttttgga 48465415  T

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Target: scaffold0636 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 9048 - 8982
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtatttttggaattaaataagggc 82  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  9048 agtagggcatttatgcaatttttttcaaaagtggggcatttttgtatttttggaattaaataagggc 8982  T

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Target: scaffold0773 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 44 - 94
Alignment:
Q  16 agtagggcatttatgcaatttttttcaaaactagggcatttttgtattttt 66  Q
    |||||||||||| |||||||||||||||||   ||||||||||| ||||||    
T  44 agtagggcatttgtgcaatttttttcaaaaggggggcatttttggattttt 94  T

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