View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2706_low_7 (Length: 293)

Name: NF2706_low_7
Description: NF2706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2706_low_7
NF2706_low_7
[»] scaffold0288 (2 HSPs)
scaffold0288 (97-280)||(3767-3950)
scaffold0288 (1-99)||(4091-4187)
[»] chr8 (3 HSPs)
chr8 (199-280)||(1674229-1674310)
chr8 (199-280)||(20863891-20863972)
chr8 (199-261)||(16686334-16686396)
[»] chr6 (28 HSPs)
chr6 (199-280)||(4617025-4617106)
chr6 (198-281)||(4299787-4299870)
chr6 (147-280)||(4625902-4626035)
chr6 (199-277)||(4601792-4601870)
chr6 (198-280)||(4267214-4267296)
chr6 (199-277)||(4480696-4480774)
chr6 (202-280)||(4570978-4571056)
chr6 (199-280)||(4557128-4557209)
chr6 (202-280)||(4504445-4504523)
chr6 (199-261)||(4505860-4505922)
chr6 (198-280)||(3171743-3171825)
chr6 (198-280)||(4256660-4256742)
chr6 (199-273)||(4563714-4563788)
chr6 (202-280)||(4585642-4585720)
chr6 (202-280)||(4592237-4592315)
chr6 (199-261)||(4606958-4607020)
chr6 (199-280)||(4492958-4493039)
chr6 (199-280)||(4516324-4516405)
chr6 (199-279)||(4560509-4560589)
chr6 (202-280)||(4490403-4490481)
chr6 (198-280)||(4622144-4622226)
chr6 (199-280)||(4613766-4613847)
chr6 (200-280)||(4392074-4392154)
chr6 (198-280)||(4260202-4260284)
chr6 (199-280)||(4515169-4515250)
chr6 (215-280)||(4568072-4568137)
chr6 (199-247)||(4461126-4461174)
chr6 (200-284)||(4598175-4598259)
[»] chr5 (2 HSPs)
chr5 (199-279)||(28000148-28000228)
chr5 (198-280)||(24103001-24103083)
[»] scaffold0477 (1 HSPs)
scaffold0477 (197-280)||(4734-4817)
[»] chr7 (1 HSPs)
chr7 (193-255)||(3086417-3086479)
[»] chr3 (1 HSPs)
chr3 (199-273)||(1281117-1281191)


Alignment Details
Target: scaffold0288 (Bit Score: 184; Significance: 1e-99; HSPs: 2)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 97 - 280
Target Start/End: Complemental strand, 3950 - 3767
Alignment:
Q  97 ttatattggtcaactcaaataactaaatgtatcatatttgattgactgtcaaacaaaatcaagaggatatcgatgaatacacaaccacattttaagttaa 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3950 ttatattggtcaactcaaataactaaatgtatcatatttgattgactgtcaaacaaaatcaagaggatatcgatgaatacacaaccacattttaagttaa 3851  T
Q  197 cattgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3850 cattgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 3767  T

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Target: scaffold0288; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4187 - 4091
Alignment:
Q  1 tttctgcacttctgttgagggtgtatagtagcttgtgaaattgatcaatatttgcttgtaatgtaagatgcttatgaaccgatattggtccttgtgtta 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  4187 tttctgcacttctgttgagtgtgtatagtagcttgtgaaattgatcaatatttgcttgta--gtaagatgcttatgaaccgatattggtccttgtgtta 4091  T

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Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 1674229 - 1674310
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||||||| || |||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  1674229 ttgtttaagcaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttc 1674310  T

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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 20863972 - 20863891
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||||||| ||||||||||| |||||||||| |||||| ||||||| |||  | ||||| |||| |||||||||||||    
T  20863972 ttgtttaagcaacacctccttaatcactttgtccaagttcatatatgaaccaccttccggtcttgtgtcctcctctgccttc 20863891  T

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Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 16686396 - 16686334
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtct 261  Q
    ||||||||||||||||||| |||| ||||| |||| |||||||||||||| |||||| |||||    
T  16686396 ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtct 16686334  T

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Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 4617025 - 4617106
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||||||| || |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  4617025 ttgtttaagcaacacatccttaataactttgttcaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttc 4617106  T

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Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 4299870 - 4299787
Alignment:
Q  198 attgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttca 281  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||  |||||||||||||||||||||    
T  4299870 attgtttaagcagaacctccttaataactttgtccaagttcatgtacgaacaaccacctggattagtgttctcctctgccttca 4299787  T

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Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 280
Target Start/End: Original strand, 4625902 - 4626035
Alignment:
Q  147 aaacaaaatcaagaggatatcgatgaatacacaaccacattttaagttaacattgtttaagcaaaacctccttaataactttgtccaggttcatgtatga 246  Q
    |||| |||||||||||  || ||||||||||||||||||||||||  ||| ||||||||||||| || || ||||| | ||| ||||  |||||||||||    
T  4625902 aaaccaaatcaagaggggattgatgaatacacaaccacattttaatctaatattgtttaagcaagacatcattaatcagtttatccatattcatgtatga 4626001  T
Q  247 acgaccacctggtctagtgttctcctctgccttc 280  Q
    || |||||| || ||| |||||||||||||||||    
T  4626002 acaaccaccgggactaatgttctcctctgccttc 4626035  T

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Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 4601792 - 4601870
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgcc 277  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||| ||||    
T  4601792 ttgtttaagcaacacctccttaataactttgtccaggttcttgtatgaacaaccacctagtctagtgctctcctttgcc 4601870  T

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Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 4267296 - 4267214
Alignment:
Q  198 attgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||  |||||| ||||| |||||||| |||||||||    
T  4267296 attgtttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttc 4267214  T

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Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 4480696 - 4480774
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgcc 277  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||| |||||| ||||| |||| ||||||||||    
T  4480696 ttgtttaagcaagacctccttaatcactttgtccaagttcatgtatgaacaaccaccaggtcttgtgtcctcctctgcc 4480774  T

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Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 4570978 - 4571056
Alignment:
Q  202 tttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||| |||||| ||||| |||| |||||| ||||||    
T  4570978 tttaagcaaaacctccttaatcactttttccaagttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttc 4571056  T

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Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 4557128 - 4557209
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||||||||||||||||||| ||||| ||||  ||||||||||||| |||||| ||||| |||| |||||| ||||||    
T  4557128 ttgtttaagcaaaacctccttaatcactttttccaaattcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttc 4557209  T

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Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4504523 - 4504445
Alignment:
Q  202 tttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||| || |||||||| |||||||||| |||||||||||||| ||||||  |||| |||| |||||||||||||    
T  4504523 tttaagcaagacgtccttaatcactttgtccaagttcatgtatgaacaaccaccaagtcttgtgtcctcctctgccttc 4504445  T

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Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 4505860 - 4505922
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtct 261  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||| |||||    
T  4505860 ttgtttaagcaacacctccttaataactttgtccaagttcatgaatgaacaaccaccaggtct 4505922  T

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Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 3171743 - 3171825
Alignment:
Q  198 attgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||| ||||||||||| ||||| |||| |||||||||||||| ||||||   ||| || | |||||||||||||    
T  3171743 attgtttaagcaagacctccttaatcactttatccaagttcatgtatgaacaaccaccaaatcttgtatcctcctctgccttc 3171825  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 4256742 - 4256660
Alignment:
Q  198 attgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||  |||||||||||||||||||||| ||||||  ||||| ||||| |||| || ||||||| ||||| ||||    
T  4256742 attgtttaagcatgacctccttaataactttgtccaagttcatcaatgaatgaccagctgggctggtgttcttctctgtcttc 4256660  T

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Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 4563714 - 4563788
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctc 273  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||| ||| || | ||| ||||| |||||    
T  4563714 ttgtttaagcaaaacctccttgatcactttgtccaagttcatgtatgaacaacctccagctctcgtgttttcctc 4563788  T

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Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 4585642 - 4585720
Alignment:
Q  202 tttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| || ||||| |||| |||||| ||||||    
T  4585642 tttaagcaaaacctccttaatcactttttccaagtttatgtatgaacaacctccaggtctcgtgtcctcctccgccttc 4585720  T

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Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 4592237 - 4592315
Alignment:
Q  202 tttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||| |||||||| || | |||||||| |||||| ||||||| ||| || ||||| ||||||||||||||||||    
T  4592237 tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgttctcctctgccttc 4592315  T

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Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 4607020 - 4606958
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtct 261  Q
    ||||||||||||||||| |||||| ||||| |||| |||||||||||||  ||||||||||||    
T  4607020 ttgtttaagcaaaaccttcttaatcactttttccaagttcatgtatgaaaaaccacctggtct 4606958  T

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Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 4492958 - 4493039
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||||||| || ||||| || |||||||||| |||||||||||||| |||||| |||   |||| |||||||||||||    
T  4492958 ttgtttaagcaagacatccttgatcactttgtccaagttcatgtatgaacaaccaccaggtactgtgtcctcctctgccttc 4493039  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 4516324 - 4516405
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||| ||||  ||||||||||| ||||| |||| |||||  ||||||| |||||||||||| |||| |||||||||||||    
T  4516324 ttgtttgagcagcacctccttaatcactttttccaagttcacatatgaacaaccacctggtcttgtgtcctcctctgccttc 4516405  T

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Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 4560509 - 4560589
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgcctt 279  Q
    |||||||||||| ||||||||||| ||||| |||| |||||||||||||| ||| || ||||| |||| | |||| |||||    
T  4560509 ttgtttaagcaacacctccttaatcactttctccaagttcatgtatgaacaacctccaggtctcgtgtacacctccgcctt 4560589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4490481 - 4490403
Alignment:
Q  202 tttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||  || |||||||| |||||||||| |||||||||||||| ||||||  |||| |||| |||| ||||||||    
T  4490481 tttaagcatgacatccttaatcactttgtccaagttcatgtatgaactaccaccgagtctcgtgtcctccgctgccttc 4490403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 4622144 - 4622226
Alignment:
Q  198 attgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||  |||||||||||||||||||||| |||  ||||||||| |||||| || || ||  |||| |||||||||    
T  4622144 attgtttaagcatgacctccttaataactttgtccaagttgttgtatgaacaaccaccagggctggtcgtctcatctgccttc 4622226  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 4613847 - 4613766
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||| ||||  ||||| || || |||||||||| |||||| ||||||| ||| |||||||| |||| |||||||||||||    
T  4613847 ttgtttcagcagcacctcattgatcactttgtccaagttcatatatgaacaacctcctggtctcgtgtcctcctctgccttc 4613766  T

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Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 4392154 - 4392074
Alignment:
Q  200 tgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||| ||||||||||| | |||||||| ||||||| |||||  |||||| ||||  |||| ||||| |||||||    
T  4392154 tgtttaagcaagacctccttaatcagtttgtccaagttcatgaatgaagaaccaccaggtcatgtgtcctcctttgccttc 4392074  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 4260284 - 4260202
Alignment:
Q  198 attgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||| ||||  |||| ||||||||||||||||| ||||||  |||||  ||||  ||| || ||||||||||||||||||    
T  4260284 attgtttgagcatgacctgcttaataactttgtccaagttcatcaatgaataaccagatggactggtgttctcctctgccttc 4260202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 4515250 - 4515169
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||||||| |||||||| || |||||||||| ||||| |||||||   || ||  ||||||||| ||| |||||||||    
T  4515250 ttgtttaagcaacacctccttgatcactttgtccaagttcaagtatgaagacccgccaagtctagtgtcctcgtctgccttc 4515169  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 4568072 - 4568137
Alignment:
Q  215 tccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||| |||||||||| |||||||||||||  | |||| ||||| |||| || ||||||||||    
T  4568072 tccttaatcactttgtccaagttcatgtatgaagaatcaccaggtcttgtgtccttctctgccttc 4568137  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 4461126 - 4461174
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaa 247  Q
    |||||||||||| || |||||||| |||||||||| |||| ||||||||    
T  4461126 ttgtttaagcaagacatccttaatgactttgtccaagttcttgtatgaa 4461174  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 4598175 - 4598259
Alignment:
Q  200 tgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttcatct 284  Q
    |||||||| || ||||||||||| ||||| || | |||||||||||||| ||| ||  |||| || | |||||| ||||||||||    
T  4598175 tgtttaagaaacacctccttaatcactttctctaagttcatgtatgaacaacctccaagtctcgtttcctcctccgccttcatct 4598259  T

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Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 28000228 - 28000148
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgcctt 279  Q
    |||||||| ||| || |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  28000228 ttgtttaaacaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgcctt 28000148  T

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Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 24103001 - 24103083
Alignment:
Q  198 attgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||  |||||| | ||| |||||||| |||||||||    
T  24103001 attgtttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccagatcttgtgttctcttctgccttc 24103083  T

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Target: scaffold0477 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 4817 - 4734
Alignment:
Q  197 cattgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttc 280  Q
    |||||||||||||  ||||||||||| |||||||||| ||||||||||||||  ||||| |  || ||||||||||||||||||    
T  4817 cattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccaccagaactggtgttctcctctgccttc 4734  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 3086417 - 3086479
Alignment:
Q  193 ttaacattgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacc 255  Q
    |||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||    
T  3086417 ttaatattttttaagcaagacctccttaataactttgtccaagttcatgtatgaacaaccacc 3086479  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 1281117 - 1281191
Alignment:
Q  199 ttgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctc 273  Q
    |||||||||||| |  |||||||| |||||||| | |||||||||||||| |||||| |||||||||||||||||    
T  1281117 ttgtttaagcaacatttccttaatcactttgtcgaagttcatgtatgaacaaccacccggtctagtgttctcctc 1281191  T

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