View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2707_high_14 (Length: 314)
Name: NF2707_high_14
Description: NF2707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2707_high_14 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 43744492 - 43744790
Alignment:
| Q |
1 |
atagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43744492 |
atagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccac |
43744591 |
T |
|
| Q |
101 |
caacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43744592 |
caacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgat |
43744691 |
T |
|
| Q |
201 |
ttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcct |
299 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43744692 |
ttcctcaaacttagtacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcct |
43744790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 262
Target Start/End: Original strand, 12528182 - 12528441
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| | || ||||| || ||||| ||||||||||| || | ||||| ||||||||||| ||||||||| |
|
|
| T |
12528182 |
agcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccacca |
12528281 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| |||| ||||| || | |||||||||||||| ||||| || | |||||| ||||| | | || ||||| | ||||| |||||||| | || |
|
|
| T |
12528282 |
acaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaacggtctccatacacttttcaaagaggtccatattcagtt |
12528381 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatcta |
262 |
Q |
| |
|
||| ||||| || |||||||||| || |||| |||||||||||| ||| || ||||| |
|
|
| T |
12528382 |
gctcgaacttggctcgagtgattgatgagcagaagtcaatgccctcacatatagcatcta |
12528441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 3 - 299
Target Start/End: Original strand, 28219596 - 28219892
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
28219596 |
agcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagcctcca |
28219695 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||||||| ||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
28219696 |
acaagaacaacatcgtgtacagccctcttgtccatattggcatcagtgagacacctctcaacagttttcaaacactcattgaaaagatccatattgattt |
28219795 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcct |
299 |
Q |
| |
|
||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |
|
|
| T |
28219796 |
cctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcct |
28219892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 3146942 - 3147231
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| | ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
3146942 |
agcaacggcctcatcagggttgatgctgttacacagatgcttccctgcaaaaaattcctgcaatagttgttgcacttttggaattctagacgagccaccg |
3147041 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| || |||||||||||||| || |||||||| | | |||||| | |||||||| |||| ||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
3147042 |
acaaggacgacatcatgtatagcacttttgtccatttcgacatcagcgaaacaactcttaacagtttccaaacactcagtgaaaagatccatattgattt |
3147141 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagata |
292 |
Q |
| |
|
|||||||||| ||||||||||||| || ||| || |||| |||| |||||||||||||| |||||| ||||||| ||||||||||||| |
|
|
| T |
3147142 |
cctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaataaagaatctatctcaatggtggtgatgacagcaaaagata |
3147231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 70 - 299
Target Start/End: Original strand, 8646622 - 8646851
Alignment:
| Q |
70 |
tgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattt |
169 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||| |
|
|
| T |
8646622 |
tgttgtacttttggaattctagaggagccaccaacaagaacaacatcatggatagaactcttgtccatcttggcatcattatgacaactctcaacagttt |
8646721 |
T |
|
| Q |
170 |
tcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaat |
269 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||| | ||||| || ||||||||||||| || || || |||||||| | |||||||||||||| ||||| |
|
|
| T |
8646722 |
ccaaacattcgatgaacagatccatattgattgcgtcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaataaagaatctaattcaat |
8646821 |
T |
|
| Q |
270 |
agtggtgacaacagcaaaagataatgtcct |
299 |
Q |
| |
|
|||||| | ||||||||||| |||||| |
|
|
| T |
8646822 |
ggtggtgcaagaagcaaaagatagtgtcct |
8646851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 27831365 - 27831069
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| ||||||||||| || ||| |||| ||||||||||| || ||||| ||| |||||| || || ||||| |||||||| || ||||||||| |
|
|
| T |
27831365 |
agcaacagcctcatcaggattgatgctcttgcacaaatcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccacca |
27831266 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| |||||||||| |||| |||||||||||||| | ||||| ||||||||||||||| | | || ||| || ||||| || ||||||||||||| |
|
|
| T |
27831265 |
acaaggacaacatcatctatactactcttgtccatcttagagtcagtgagacaactctcaacagtctccatacattcattgaaaaggtccatattgattt |
27831166 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcct |
299 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||| ||||||||||||||||| | ||||| ||||||||| ||| |||||| |||||| | |||||| |
|
|
| T |
27831165 |
cctcaaactttgcacgagtgatcattgaaaagaagtcaatgccctcaaataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcct |
27831069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 278
Target Start/End: Original strand, 8616358 - 8616634
Alignment:
| Q |
2 |
tagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
101 |
Q |
| |
|
||||||| ||||||||||| || |||||||| |||||||||||||| | ||||| || |||||||| || ||||| ||||||||||| |||||||| |
|
|
| T |
8616358 |
tagcaacagcctcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccacc |
8616457 |
T |
|
| Q |
102 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
201 |
Q |
| |
|
|||||||||| ||||| || | ||||| || ||||| | |||| ||| ||||||||||||| | || | ||||||||| || || |||||||||||| |
|
|
| T |
8616458 |
gacaagaacaatatcatctacactactcttctctatcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgatt |
8616557 |
T |
|
| Q |
202 |
tcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgac |
278 |
Q |
| |
|
|||||||||||| |||||||||||| || | ||||||| ||||||||| ||||| |||| | ||||||||| ||||| |
|
|
| T |
8616558 |
tcctcaaacttaacacgagtgattgatgaagagaaatcgatgccctcacataaataatcaatctcaatagtagtgac |
8616634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 290
Target Start/End: Original strand, 6789190 - 6789477
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| || | ||||||||||| || |||| ||| |||||||||||||| ||||| ||||| ||||| || |||||| |
|
|
| T |
6789190 |
agcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccacca |
6789289 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| |||||||||| || | |||||||||||||| || ||| ||||||||||||||| | |||| |||||| || || | |||||||||||||| |
|
|
| T |
6789290 |
acaaggacaacatcatttacaatactcttgtccatcttagcgtcaacaagacaactctcaacggtcttcatacactcattaaaaatatccatattgattt |
6789389 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaaga |
290 |
Q |
| |
|
|||||||||| || ||||| | || || || ||| || ||||||| ||||||||| |||||||||||||| ||||| ||| ||||||| |
|
|
| T |
6789390 |
cctcaaacttggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacctcaatagtagtgacgacaacaaaaga |
6789477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 8674043 - 8673894
Alignment:
| Q |
71 |
gttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaatttt |
170 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| || ||||||||||||||||| |||||||| |||||||| ||| |
|
|
| T |
8674043 |
gttgtacttttggaattctagaggagccaccaacaaggacaacataatggataaaacttatgtccatcttggcatcaataagacaattctcaacagtttc |
8673944 |
T |
|
| Q |
171 |
caaacactcgttgaagagatccatattgatttcctcaaacttagcacgag |
220 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||| ||||||| |
|
|
| T |
8673943 |
caaacactcgttgaaaagattgatattgatttcctcaaacttggcacgag |
8673894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 149 - 301
Target Start/End: Original strand, 8659187 - 8659339
Alignment:
| Q |
149 |
taagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctc |
248 |
Q |
| |
|
||||||||||||||||| |||||| |||||| || || ||||||||||| |||||||||||| | |||||||||||| || | |||| || || |||| |
|
|
| T |
8659187 |
taagacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagtctattccctg |
8659286 |
T |
|
| Q |
249 |
aaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctct |
301 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| ||||||||| | |||||||| |
|
|
| T |
8659287 |
aaataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctct |
8659339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 71 - 280
Target Start/End: Original strand, 8664081 - 8664288
Alignment:
| Q |
71 |
gttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaatttt |
170 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| ||||||| ||| ||| ||| ||||||||| |||| | ||||||||||||||||| ||| |
|
|
| T |
8664081 |
gttgtactttcggaattctagaggagccaccaacaaggacaacataatggataaaactcatgtccatctcggcagtaataagacaactctcaacagtttc |
8664180 |
T |
|
| Q |
171 |
caaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaata |
270 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| ||| |||| ||||||| || | | |||||| | | || || ||| ||||||||||||| |||| |
|
|
| T |
8664181 |
caaaca--cgttgaaaagatccatattgatttcatcatacttggcacgagcgaaggataaaaagaagtttaagcgctgaaacaaagaatctaccttaata |
8664278 |
T |
|
| Q |
271 |
gtggtgacaa |
280 |
Q |
| |
|
|||||||||| |
|
|
| T |
8664279 |
gtggtgacaa |
8664288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 17259919 - 17260142
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatcctt-ccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
101 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| || || ||||| |||| || |||| ||||||||||||| || ||||| ||||||||||| || ||||| |
|
|
| T |
17259919 |
agcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaat-cctgcaatagttgctgcactttcggaatcctagaagatccacc |
17260017 |
T |
|
| Q |
102 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
201 |
Q |
| |
|
|||||| |||||||||| || ||||||||| ||||| ||||| ||||||| |||||||||| | || ||||| | || || |||||||||||| |
|
|
| T |
17260018 |
aacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcactcataaaaaaggtccatattgatt |
17260117 |
T |
|
| Q |
202 |
tcctcaaacttagcacgagtgattg |
226 |
Q |
| |
|
|| |||||||| ||||||||||||| |
|
|
| T |
17260118 |
tcttcaaacttggcacgagtgattg |
17260142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 268
Target Start/End: Original strand, 17267674 - 17267882
Alignment:
| Q |
60 |
ctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactc |
159 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||| || ||||||||||| |||||||||| | ||||||||| ||||| |||||| ||||||| || |
|
|
| T |
17267674 |
ctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttc |
17267773 |
T |
|
| Q |
160 |
tcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaat |
259 |
Q |
| |
|
|||||||| | || ||||| | || || ||||||||||||||||||||||| ||||||||||||| | | | ||||||| |||| |||||||| | |
|
|
| T |
17267774 |
tcaacaatctccatgcactcatcaaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgt |
17267873 |
T |
|
| Q |
260 |
ctacctcaa |
268 |
Q |
| |
|
||||||||| |
|
|
| T |
17267874 |
ctacctcaa |
17267882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 299
Target Start/End: Original strand, 1301211 - 1301434
Alignment:
| Q |
76 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
175 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||| ||||| ||| | ||| || || || | ||| |||||||||||||||| |||| || |
|
|
| T |
1301211 |
actttgggaatcctagacgagccacccacaagaacaatatcatcgatatcactcatgcatatttttgaatcgctaagacaactctcaacggtttttgtac |
1301310 |
T |
|
| Q |
176 |
actcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggt |
275 |
Q |
| |
|
|||| || || ||||||||||| |||||||||||||| |||||||||||| || | |||| || || |||| |||||||||||| ||||||| ||||| |
|
|
| T |
1301311 |
actcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaaataaagaatcgacctcaacggtggt |
1301410 |
T |
|
| Q |
276 |
gacaacagcaaaagataatgtcct |
299 |
Q |
| |
|
||| | ||||||||| | |||||| |
|
|
| T |
1301411 |
gactaaagcaaaagagagtgtcct |
1301434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 8654201 - 8654415
Alignment:
| Q |
76 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
175 |
Q |
| |
|
||||| ||||||||||| |||||||| || || |||||||||| ||| | |||||| ||||| | ||| | |||||||| |||||||| || | || |
|
|
| T |
8654201 |
actttgggaatcctagacgagccacccacgagtacaacatcatcaatatcattcttgtatatctttgaatctctgagacaactgtcaacaatattgatac |
8654300 |
T |
|
| Q |
176 |
actcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggt |
275 |
Q |
| |
|
|||| ||||| | |||||||| ||||||||||| |||||||||||||||| || | | || || || ||| |||||||| ||||||||||| |||||| |
|
|
| T |
8654301 |
actcattgaaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggt |
8654400 |
T |
|
| Q |
276 |
gacaacagcaaaaga |
290 |
Q |
| |
|
||||| || |||||| |
|
|
| T |
8654401 |
gacaaaagtaaaaga |
8654415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 8636833 - 8636699
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||| ||| ||| ||||||||| |||||| | ||||| ||||| |||||||| || || |||||||||||||||||||||||| |
|
|
| T |
8636833 |
agcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacctttggaatcctagaggagccacca |
8636734 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccat |
137 |
Q |
| |
|
||||| |||||||||| |||| |||||| ||||| |
|
|
| T |
8636733 |
acaaggacaacatcatctatattgctcttatccat |
8636699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 278
Target Start/End: Complemental strand, 8586197 - 8585921
Alignment:
| Q |
2 |
tagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
101 |
Q |
| |
|
||||||| ||||||||||| || |||||||| || ||||| ||||| || || || |||||||| |||||||| ||||| || || |||||||| |
|
|
| T |
8586197 |
tagcaacagcctcatcaggattgatgttcttgcataaatctttcccattgaagaagtcactcaatagttcctgtactttgggaattctggacgagccacc |
8586098 |
T |
|
| Q |
102 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
201 |
Q |
| |
|
||||| |||| ||| | || | | |||| || ||||| | ||| |||||||||||||||||| | || | |||||| || || || |||||||||||| |
|
|
| T |
8586097 |
gacaaggacaatatcgtctacaccattcttctctatcttagaatcggtaagacaactctcaacagtatttatacactcattaaaaaggtccatattgatt |
8585998 |
T |
|
| Q |
202 |
tcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgac |
278 |
Q |
| |
|
||||||||||| |||| ||||||| || | ||||||| | ||||||| ||||| |||| | |||||||| ||||| |
|
|
| T |
8585997 |
tcctcaaacttgacacgcgtgattgatgaagagaaatcgacgccctcacataaataatcaatttcaatagtagtgac |
8585921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 290
Target Start/End: Complemental strand, 10494791 - 10494577
Alignment:
| Q |
76 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
175 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||| ||||| ||| | |||||| ||||| | ||| | |||||||| |||||||| |||| || |
|
|
| T |
10494791 |
actttgggaatcctagacgagccacccacaagaacaatatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatac |
10494692 |
T |
|
| Q |
176 |
actcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggt |
275 |
Q |
| |
|
||||| |||| | || ||||| ||||||||||| || ||||||||||||| || | | || || || ||| |||||||| ||| ||||||| ||||| |
|
|
| T |
10494691 |
actcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggt |
10494592 |
T |
|
| Q |
276 |
gacaacagcaaaaga |
290 |
Q |
| |
|
||||| || |||||| |
|
|
| T |
10494591 |
gacaaaagaaaaaga |
10494577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 7878175 - 7878066
Alignment:
| Q |
51 |
aaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagta |
150 |
Q |
| |
|
|||||| ||||||||||| || || ||||| |||||||||| || ||||||||||| |||||||||| || | | ||||||||||| | ||||||||| |
|
|
| T |
7878175 |
aaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagtacaacatcatctacattgttcttgtccatcatagcatcagta |
7878076 |
T |
|
| Q |
151 |
agacaactct |
160 |
Q |
| |
|
|||||||||| |
|
|
| T |
7878075 |
agacaactct |
7878066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 8576004 - 8576213
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| || |||||||| |||| ||||| ||||| ||| ||||| ||||||||||| || |||||| |
|
|
| T |
8576004 |
agcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcactttaggaatcctagaagaaccacca |
8576103 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| |||||||||| || | ||||||||||||| ||||||| ||||||| | | |||| | |||| ||||| | ||||| | |||||| |||| |
|
|
| T |
8576104 |
acaaggacaacatcatctacactattcttgtccatcttagcatcagcaagacaaatattaacagtattcatacacttttcaaagaggttcatattcattt |
8576203 |
T |
|
| Q |
203 |
cctcaaactt |
212 |
Q |
| |
|
|||||||||| |
|
|
| T |
8576204 |
cctcaaactt |
8576213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 8545311 - 8545465
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||||||| |||| || || |||||||| |||||| ||||| ||||| ||| ||||| ||||||||||| || || ||| |
|
|
| T |
8545311 |
agcaacagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccgcca |
8545410 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaac |
157 |
Q |
| |
|
||||| |||||||||| || | | |||||||||||| |||||| |||||||| |
|
|
| T |
8545411 |
acaaggacaacatcatctacactacccttgtccatcttagcatcaacaagacaac |
8545465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 262
Target Start/End: Original strand, 8601701 - 8601911
Alignment:
| Q |
52 |
aaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaa |
151 |
Q |
| |
|
|||||||| | || || |||||| ||||| ||||||||||| || || |||||||| ||| |||||| | | ||||| || |||| |||||| ||| |
|
|
| T |
8601701 |
aaaaattctttcagtaattgttgcactttgggaatcctagaagaaccgccaacaaggacagcatcatccacactactcttttcgatctgagcatcactaa |
8601800 |
T |
|
| Q |
152 |
gacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaa |
251 |
Q |
| |
|
||||||| |||||| | | | ||||| || ||||| |||| ||||| || ||||||||| || |||||||||| || | ||||||||| |||||||| |
|
|
| T |
8601801 |
gacaactttcaacagtctctatacacttcttaaagaggtccacattgagttgctcaaacttggcccgagtgattgatgaatggaaatcaataccctcaaa |
8601900 |
T |
|
| Q |
252 |
taaagaatcta |
262 |
Q |
| |
|
||| ||||||| |
|
|
| T |
8601901 |
taaggaatcta |
8601911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 8667170 - 8667384
Alignment:
| Q |
76 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
175 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||| |||||||||| ||| | |||||| ||||| | ||| | ||||| | ||||| || |||| || |
|
|
| T |
8667170 |
actttgggaatcctagacgagccaccgacaagtacaacatcatcaatatcattcttgtatatctttgaatccctgagacaggtgtcaactatattcatac |
8667269 |
T |
|
| Q |
176 |
actcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggt |
275 |
Q |
| |
|
|||| ||||| | ||||| || | ||||||||| ||||||||||| |||| || | | || || || ||| |||||||| ||||||||||| |||||| |
|
|
| T |
8667270 |
actcattgaaaaagtccatgttaagttcctcaaatttagcacgagtaattgatgaacaaaagtcgattcccgtaaataaagcatctacctcaacagtggt |
8667369 |
T |
|
| Q |
276 |
gacaacagcaaaaga |
290 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
8667370 |
aacaaaagcaaaaga |
8667384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 8102403 - 8102488
Alignment:
| Q |
61 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatc |
146 |
Q |
| |
|
||||| ||||| || ||||| |||||||||| || ||||||||||||||||||||||| | | ||||||||||||||| ||||| |
|
|
| T |
8102403 |
tgcaacagttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttagcatc |
8102488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 8569989 - 8570198
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||||||| | || || || |||||||| ||||| || || ||||| || ||||| ||||||||||| || |||||| |
|
|
| T |
8569989 |
agcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccacca |
8570088 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| |||||||||| || | |||| |||||||| ||||||| ||||||||| | |||| ||| || ||||| | ||||| | |||||| |||| |
|
|
| T |
8570089 |
acaaggacaacatcatctacactattcttttccatcttagcatcagcaagacaactattaacagtttccatacacttttcaaagaggttcatattcattt |
8570188 |
T |
|
| Q |
203 |
cctcaaactt |
212 |
Q |
| |
|
|||||||||| |
|
|
| T |
8570189 |
cctcaaactt |
8570198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 280
Target Start/End: Complemental strand, 13333798 - 13333669
Alignment:
| Q |
151 |
agacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaa |
250 |
Q |
| |
|
|||||||| |||||||| |||| ||||||| |||| | || ||||| ||||||||||| || ||||||||||||| || | | || || || ||| || |
|
|
| T |
13333798 |
agacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataa |
13333699 |
T |
|
| Q |
251 |
ataaagaatctacctcaatagtggtgacaa |
280 |
Q |
| |
|
|||||| |||||| |||| ||||||||||| |
|
|
| T |
13333698 |
ataaagcatctacttcaacagtggtgacaa |
13333669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 29582331 - 29582231
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| || | |||||||||||||| |||||||| |||||||| || || ||||| ||||| ||||| ||||||||| |
|
|
| T |
29582331 |
agcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaattctagaagagccacca |
29582232 |
T |
|
| Q |
103 |
a |
103 |
Q |
| |
|
| |
|
|
| T |
29582231 |
a |
29582231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 8581378 - 8581493
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| || || |||||||| ||||| ||||| ||||| ||| ||||| ||||||||||| || |||||| |
|
|
| T |
8581378 |
agcaacagcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccacca |
8581477 |
T |
|
| Q |
103 |
acaagaacaacatcat |
118 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
8581478 |
acaaggacaacatcat |
8581493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 8590364 - 8590458
Alignment:
| Q |
51 |
aaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcat |
145 |
Q |
| |
|
|||||| || |||||||| || || ||||| ||||||||||| || ||||||||||| |||||||||| || | | ||||||||||||| |||| |
|
|
| T |
8590364 |
aaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 8383308 - 8383204
Alignment:
| Q |
61 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactct |
160 |
Q |
| |
|
|||||||| | ||| ||||| |||||||| || || ||||| | ||||||||||||| || | ||||||| |||||| |||||||||||||| |||| |
|
|
| T |
8383308 |
tgcaatagctcttgcactttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctct |
8383209 |
T |
|
| Q |
161 |
caaca |
165 |
Q |
| |
|
||||| |
|
|
| T |
8383208 |
caaca |
8383204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 8017845 - 8017760
Alignment:
| Q |
61 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatc |
146 |
Q |
| |
|
||||| ||||| || ||||| ||||| |||| || || |||||||||||||||||||| | || | ||||||||||||| ||||| |
|
|
| T |
8017845 |
tgcaacagttgctgaactttgggaattctagttgaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatc |
8017760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 8e-58; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 52 - 273
Target Start/End: Original strand, 43625139 - 43625360
Alignment:
| Q |
52 |
aaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaa |
151 |
Q |
| |
|
||||| |||||||| || |||| |||||||||||| ||||||||||| |||||||| |||||||| || ||||| |||||||||| |||||||||| ||| |
|
|
| T |
43625139 |
aaaaactcctgcaacagctgttttacttttggaattctagaggagccgccaacaaggacaacatcgtggatagcactcttgtccaacttggcatcaataa |
43625238 |
T |
|
| Q |
152 |
gacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaa |
251 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||| || ||||||||||||| || |||||| ||||| || || |
|
|
| T |
43625239 |
gacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaataccacggaa |
43625338 |
T |
|
| Q |
252 |
taaagaatctacctcaatagtg |
273 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
43625339 |
taaagaatctacctcaatagtg |
43625360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 76 - 301
Target Start/End: Complemental strand, 16657934 - 16657709
Alignment:
| Q |
76 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
175 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||| |||| ||| | | ||| |||||| | |||| ||||||| |||||||| |||||| || |
|
|
| T |
16657934 |
actttgggaatcctagatgagccacccacaagaacaacgtcatcaatatcaccaatgtgcatctttgaatcacgaagacaattctcaacagttttcatac |
16657835 |
T |
|
| Q |
176 |
actcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggt |
275 |
Q |
| |
|
|||| ||||| ||||||||||| |||||||||||||| ||||| ||||||| || | | || ||||| |||| |||||||||||||||||||| |||||| |
|
|
| T |
16657834 |
actcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctcaacagtggt |
16657735 |
T |
|
| Q |
276 |
gacaacagcaaaagataatgtcctct |
301 |
Q |
| |
|
||||| ||||||||| | |||||||| |
|
|
| T |
16657734 |
gacaaaagcaaaagagagtgtcctct |
16657709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 272
Target Start/End: Complemental strand, 12245896 - 12245627
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| ||||| |||||||||||| |||| ||||| |||||||| ||||| ||||| ||||| ||||| ||||| ||||||||||| || |||||| |
|
|
| T |
12245896 |
agcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccacca |
12245797 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| |||| ||||| ||||| |||||||||||||| ||||| ||| ||||||||||||| | || | ||| || || | ||||| | ||| | || |
|
|
| T |
12245796 |
acaagtacaaaatcatctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaatt |
12245697 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagt |
272 |
Q |
| |
|
|||||||||| || ||| |||| | || | | ||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
12245696 |
cctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaatagt |
12245627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 14703096 - 14703364
Alignment:
| Q |
13 |
tcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaa |
112 |
Q |
| |
|
||||||||||||||| | || ||||| |||||||| ||||| ||||| |||| ||| |||||||| ||||||| ||| || ||||| |||||||||| |
|
|
| T |
14703096 |
tcatcagggttaatgctgttgcacaactccttcccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaa |
14703195 |
T |
|
| Q |
113 |
catcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaactt |
212 |
Q |
| |
|
|||||| || |||||||||||||| |||||| ||||||||||||||||||| |||| |||||| || || | |||||||| ||||| |||||||| |
|
|
| T |
14703196 |
catcatctactctactcttgtccatcttagcatcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttcaaactt |
14703295 |
T |
|
| Q |
213 |
agcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaac |
281 |
Q |
| |
|
|| | | |||| | || | | || ||||||| | |||||||| ||||||||||||||||| |||||| |
|
|
| T |
14703296 |
ggccctattgatcgatgaagaaaagtcaatgcattgaaataaagcatctacctcaatagtggcgacaac |
14703364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 272
Target Start/End: Original strand, 11999093 - 11999354
Alignment:
| Q |
10 |
gcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaa |
109 |
Q |
| |
|
|||||||||||||||||| |||| ||||| |||||||| ||||| || || ||||| ||||| ||||| ||| ||||||| || ||||||||||| | |
|
|
| T |
11999093 |
gcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggactttggga-tcctagaagatccaccaacaagta |
11999191 |
T |
|
| Q |
110 |
caacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaa |
209 |
Q |
| |
|
||||||||| ||||| |||||||||||||| ||||| ||| ||||||||||||| | || | ||| || || | ||||| | ||| | ||||||||| |
|
|
| T |
11999192 |
caacatcatctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaa |
11999291 |
T |
|
| Q |
210 |
cttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagt |
272 |
Q |
| |
|
||| || ||| |||| | || | | ||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
11999292 |
ctttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaatagt |
11999354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 269
Target Start/End: Original strand, 12234368 - 12234633
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| ||||| ||||||||||| |||| |||| |||||||| ||||| |||||||||||||| || ||||| |||||||||||||| || ||| |
|
|
| T |
12234368 |
agcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggacccgcca |
12234466 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
| ||| ||||| |||| | || ||||||||||| |||||| ||||||||||||||||||| |||| |||||| | | ||||||||||| |||| |
|
|
| T |
12234467 |
ataaggacaacttcatccaccctacttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaataagaagatccatattcattt |
12234566 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaat |
269 |
Q |
| |
|
|||||||||| || | | |||| | || | | ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12234567 |
cctcaaacttggccctattgatcgatgaagaaaaatcaatgccttcaaataaagaatctacctcaat |
12234633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 272
Target Start/End: Complemental strand, 12259064 - 12258802
Alignment:
| Q |
10 |
gcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaa |
109 |
Q |
| |
|
||||||||||| |||||| |||| ||||| || ||||| ||||| ||||| ||||| || || ||||| |||||||||| || ||||| ||||| | |
|
|
| T |
12259064 |
gcctcatcaggattaatgctcttgcacaactctttccccttgaaaaaatcctgtaatagctgctgcactttgagaatcctagaagacccacctacaagga |
12258965 |
T |
|
| Q |
110 |
caacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaa |
209 |
Q |
| |
|
||||||||| || | ||||||||| | || ||||| |||||||||||||||||| | |||| || || ||||| || |||| ||| ||||||||||| |
|
|
| T |
12258964 |
caacatcatctacattactcttgtccgtgttagcatccgtaagacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttcctcaaa |
12258865 |
T |
|
| Q |
210 |
cttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagt |
272 |
Q |
| |
|
||| |||||| |||||| || | | ||||||||||| ||| |||||||||||| ||||||||| |
|
|
| T |
12258864 |
cttggcacgattgattgatgcagaaaaatcaatgccatcacataaagaatctatctcaatagt |
12258802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 16662482 - 16662207
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccc-tgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
101 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| ||||| |||||||| | || || || | |||||| || || ||||||||||||||||| ||||| || |
|
|
| T |
16662482 |
agcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttac-gcaataattcctgcacttttggaatcctagacgagccccc |
16662384 |
T |
|
| Q |
102 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
201 |
Q |
| |
|
|||||||||| |||||||| | | | |||||||||||| | ||| || ||||||||||||||| |||| ||||||||| || || ||||||||||| |
|
|
| T |
16662383 |
gacaagaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggcccatattgatt |
16662284 |
T |
|
| Q |
202 |
tcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgac |
278 |
Q |
| |
|
|| |||||||| ||||||||| || |||| |||| |||||| |||| ||||| |||| | |||||||| |||||| |
|
|
| T |
16662283 |
tcttcaaacttgacacgagtgagtgatgtagagaagtcaatgtcctcgtataaataatcaatctcaatagcggtgac |
16662207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 274
Target Start/End: Original strand, 7541904 - 7542175
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| ||||||||||| |||||| |||| ||||| ||||| || ||||| |||| ||||| || |||||| | |||||||| || || || || |
|
|
| T |
7541904 |
agcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccg |
7542003 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
||||| |||||||||| ||| |||||||||||| || |||||| ||||||| || ||||||| ||| ||||||||| || ||||||||||| || | |
|
|
| T |
7542004 |
acaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatattcatct |
7542103 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtgg |
274 |
Q |
| |
|
|||||||||| || | | |||| | || | | || |||||||| | |||||||||||||||||||||||||| |
|
|
| T |
7542104 |
cctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaatagtgg |
7542175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 39373366 - 39373417
Alignment:
| Q |
111 |
aacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctca |
162 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
39373366 |
aacatcatgtatagcaatcttgtccatcttggcatcagtgagacaactctca |
39373417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 30774930 - 30775153
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccc-tgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
101 |
Q |
| |
|
|||||||||||||||||| || ||| |||| |||||||||||||| | || ||||| | ||||||||| || ||||| ||||||||||| || ||||| |
|
|
| T |
30774930 |
agcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattac-gcaatagttcctgcactttgggaatcctagaagaaccacc |
30775028 |
T |
|
| Q |
102 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
201 |
Q |
| |
|
|||||||||| ||||| || | |||||||| | ||| | |||||||||||||||||||||| | | | |||||| || || || |||||||||||| |
|
|
| T |
30775029 |
gacaagaacaatatcatctacactactcttgtctacctttgaatcagtaagacaactctcaacagtctgtatacactcattaaaaaggtccatattgatt |
30775128 |
T |
|
| Q |
202 |
tcctcaaacttagcacgagtgattg |
226 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
30775129 |
tcctcaaacttgacacgagtgattg |
30775153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 10 - 270
Target Start/End: Original strand, 35132141 - 35132402
Alignment:
| Q |
10 |
gcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaa |
109 |
Q |
| |
|
|||||||| ||||||||| |||| ||||| ||||||||| ||||| | |||||||| || || ||||| ||||||||||| || || |||||||||| |
|
|
| T |
35132141 |
gcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaagaa |
35132240 |
T |
|
| Q |
110 |
caacatcatgta-tagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaa |
208 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||| | ||||||||||| || | |||| |||||| || || || || ||| |||||||||| |
|
|
| T |
35132241 |
caacatcatctacccttgctcttgtccatcttagcatcaatgagacaactctctacggtattcatacactcattaaaaaggtctgcattcatttcctcaa |
35132340 |
T |
|
| Q |
209 |
acttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaata |
270 |
Q |
| |
|
|||| || ||| |||||| || | | ||||||||||| | ||||||||||||||| |||||| |
|
|
| T |
35132341 |
acttggcgcgattgattgatgaagaaaaatcaatgccttgaaataaagaatctacttcaata |
35132402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 290
Target Start/End: Complemental strand, 9336332 - 9336094
Alignment:
| Q |
52 |
aaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaa |
151 |
Q |
| |
|
|||||||| ||||||||| ||| ||||| ||||||||||| |||||||| |||||||||| ||||| ||| ||||||| ||||| | ||| | | |
|
|
| T |
9336332 |
aaaaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaatatcatcaatattactcttgtatatctttgaatccctga |
9336233 |
T |
|
| Q |
152 |
gacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaa |
251 |
Q |
| |
|
|||| | |||||||| |||| |||||| ||||| | ||||| || | ||||||||| || ||||||||||||| || | | || || || ||| ||| |
|
|
| T |
9336232 |
gacaggtgtcaacaatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaa |
9336133 |
T |
|
| Q |
252 |
taaagaatctacctcaatagtggtgacaacagcaaaaga |
290 |
Q |
| |
|
||||| ||||||||||| |||||| |||| ||||||||| |
|
|
| T |
9336132 |
taaagcatctacctcaacagtggtaacaaaagcaaaaga |
9336094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 23588165 - 23588107
Alignment:
| Q |
61 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatg |
119 |
Q |
| |
|
||||| |||||||| || || |||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
23588165 |
tgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacatcatg |
23588107 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 23597075 - 23596960
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| | |||||||| || || || ||||| |||||||| || || |||||||||| || || ||| |
|
|
| T |
23597075 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
23596976 |
T |
|
| Q |
103 |
acaagaacaacatcat |
118 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
23596975 |
acaagaacaacatcat |
23596960 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 54396156 - 54396217
Alignment:
| Q |
58 |
tcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatg |
119 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| | || ||||||||||||||||| ||||| |
|
|
| T |
54396156 |
tcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcatg |
54396217 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 301
Target Start/End: Complemental strand, 4679047 - 4678750
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||| ||||| || |||| ||||||||||||| |||||| || |||||||| | || ||||| |||||||| || || ||||| |
|
|
| T |
4679047 |
agcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccaccc |
4678948 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
|||||||||||||||| ||| ||| | |||||| | |||| |||||||||||| |||| ||| || |||||||||||| || |||||||| |||| |
|
|
| T |
4678947 |
acaagaacaacatcatcaatattactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaattt |
4678848 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctct |
301 |
Q |
| |
|
|||||||||| |||||||| || | || | | || || || |||| |||||||||||||| ||||| ||||||||||| || ||||| | |||||||| |
|
|
| T |
4678847 |
cctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatcta-ctcaacagtggtgacaaaggcgaaagagagtgtcctct |
4678750 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 279
Target Start/End: Original strand, 15594712 - 15594988
Alignment:
| Q |
3 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
102 |
Q |
| |
|
|||||| |||||||||||||| ||| || | ||||| ||||| || | ||||| |||| |||||||||||| ||||| ||||||||||| || |||||| |
|
|
| T |
15594712 |
agcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccacca |
15594811 |
T |
|
| Q |
103 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
202 |
Q |
| |
|
|||| |||| ||||| || | ||||| | |||||| |||||| ||||||||||||||| || |||| ||| || || || | ||||| ||||||| |
|
|
| T |
15594812 |
acaatgacaatatcatttacactactcttattcatcttagcatcatcaagacaactctcaactatcttcatacaatccttaaaaaagtccatgttgattt |
15594911 |
T |
|
| Q |
203 |
cctcaaacttagcacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgaca |
279 |
Q |
| |
|
| |||||||| | |||||| | | || |||||| ||||| || | ||||||| ||||||||||||| || |||||| |
|
|
| T |
15594912 |
cttcaaacttggaacgagtaaccgatgaaaagaagtcaataccgttaaataaacaatctacctcaatggtagtgaca |
15594988 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 34467229 - 34467052
Alignment:
| Q |
52 |
aaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaa |
151 |
Q |
| |
|
||||| ||| ||||||| || || ||||| ||||||||||| ||||| || ||||| ||| ||||||| | | ||| |||||||||| |||||| || |
|
|
| T |
34467229 |
aaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcatgcacactactcgtgtccatcttagcatcaacaa |
34467130 |
T |
|
| Q |
152 |
gacaactctcaacaattttcaaacact---cgttgaagagatccatattgatttcctcaaacttagcacgagtgattg |
226 |
Q |
| |
|
|||||||| ||||||| ||| || | | || |||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
34467129 |
gacaactcacaacaatcctcatgcattaatctttaaagaagtccatattgatttcctcaaacttggcacgagtgattg |
34467052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 52549353 - 52549293
Alignment:
| Q |
152 |
gacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaactt |
212 |
Q |
| |
|
||||||| |||||||| |||| |||||| || || || |||||||| |||||||||||||| |
|
|
| T |
52549353 |
gacaactttcaacaatcttcatacactccttaaaaaggtccatattcatttcctcaaactt |
52549293 |
T |
|
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