View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2709_low_8 (Length: 249)
Name: NF2709_low_8
Description: NF2709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2709_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 2394726 - 2394964
Alignment:
| Q |
1 |
aaaagggattttacacttatctattttgaagttgaacttagacatgtacatgttggatttgtagaaatctttcgaatatgtttgaaaattgaatagatat |
100 |
Q |
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| T |
2394726 |
aaaagggattttacacttatctattttgaagttgaacttagacatgtacatgttggatttgtagaaatctttcgaatatgtttgaaaattgaatagatag |
2394825 |
T |
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| Q |
101 |
gtttaatagtgtaatggttaaaagatatgccttagatcagaaggttctaggtttgagttgcactataaatattgaagaaagatatttgtaagcacgttct |
200 |
Q |
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| T |
2394826 |
gtttaatagtgtaatggttaaaagatatgccttagattagaaggttctaggtttgggttccactttaaatattgaacaaagatatttgtaagcacgttct |
2394925 |
T |
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| Q |
201 |
gaattctaagggttttcctaccttatattagggcttcat |
239 |
Q |
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| T |
2394926 |
gaattctaagggttttcctaccttatactagagcttcat |
2394964 |
T |
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