View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2710R-Insertion-14 (Length: 537)

Name: NF2710R-Insertion-14
Description: NF2710R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2710R-Insertion-14
NF2710R-Insertion-14
[»] chr7 (69 HSPs)
chr7 (9-364)||(7193143-7193498)
chr7 (354-521)||(11617589-11617756)
chr7 (352-534)||(32758215-32758395)
chr7 (350-512)||(33871908-33872068)
chr7 (351-534)||(21172007-21172188)
chr7 (360-534)||(2541026-2541201)
chr7 (353-534)||(48735122-48735302)
chr7 (352-534)||(42805478-42805662)
chr7 (352-523)||(19426889-19427059)
chr7 (360-534)||(35334823-35334995)
chr7 (352-534)||(42798623-42798805)
chr7 (353-523)||(10693073-10693241)
chr7 (352-523)||(27629599-27629770)
chr7 (369-533)||(8148962-8149126)
chr7 (397-534)||(46354148-46354287)
chr7 (396-534)||(47077898-47078034)
chr7 (369-523)||(23419690-23419843)
chr7 (351-529)||(40463836-40464013)
chr7 (352-534)||(43557426-43557611)
chr7 (383-523)||(28362175-28362314)
chr7 (352-506)||(42391099-42391251)
chr7 (397-523)||(19265781-19265905)
chr7 (352-534)||(34626207-34626388)
chr7 (441-537)||(7193036-7193132)
chr7 (397-513)||(14099050-14099166)
chr7 (397-513)||(14409067-14409183)
chr7 (353-534)||(47716413-47716596)
chr7 (414-523)||(12473269-12473378)
chr7 (404-512)||(13805078-13805185)
chr7 (414-534)||(22699031-22699151)
chr7 (352-487)||(7879639-7879774)
chr7 (403-534)||(2662985-2663112)
chr7 (349-489)||(18512449-18512588)
chr7 (354-513)||(29907392-29907552)
chr7 (446-534)||(42495928-42496016)
chr7 (382-513)||(19266425-19266556)
chr7 (402-534)||(42476827-42476957)
chr7 (402-523)||(48123533-48123653)
chr7 (354-509)||(11741774-11741927)
chr7 (414-533)||(5180218-5180337)
chr7 (446-533)||(18326989-18327076)
chr7 (349-491)||(31591105-31591245)
chr7 (433-523)||(5814436-5814526)
chr7 (414-512)||(7644932-7645030)
chr7 (352-497)||(38262195-38262340)
chr7 (414-523)||(3469238-3469348)
chr7 (381-476)||(1408469-1408564)
chr7 (362-512)||(22065564-22065713)
chr7 (446-520)||(7794599-7794673)
chr7 (462-528)||(14732931-14732997)
chr7 (372-522)||(28078151-28078300)
chr7 (362-502)||(18747472-18747613)
chr7 (352-437)||(23618976-23619061)
chr7 (446-537)||(21447541-21447632)
chr7 (351-458)||(35787267-35787373)
chr7 (462-528)||(1424019-1424085)
chr7 (409-511)||(6736867-6736968)
chr7 (453-523)||(29140460-29140530)
chr7 (409-505)||(32233191-32233286)
chr7 (414-513)||(16341253-16341352)
chr7 (372-467)||(38604548-38604642)
chr7 (446-513)||(44123714-44123781)
chr7 (448-513)||(1524281-1524346)
chr7 (409-497)||(23223669-23223757)
chr7 (352-428)||(27889315-27889391)
chr7 (414-490)||(35203437-35203513)
chr7 (453-513)||(42101985-42102045)
chr7 (469-512)||(39123866-39123909)
chr7 (480-528)||(28685261-28685309)
[»] chr5 (53 HSPs)
chr5 (352-536)||(24448842-24449026)
chr5 (349-528)||(4619100-4619281)
chr5 (351-534)||(38879535-38879720)
chr5 (352-535)||(35710266-35710447)
chr5 (351-534)||(41014273-41014455)
chr5 (352-534)||(8169983-8170163)
chr5 (352-528)||(43334162-43334340)
chr5 (352-513)||(28516432-28516594)
chr5 (372-512)||(27328728-27328870)
chr5 (351-501)||(32703411-32703559)
chr5 (362-513)||(208936-209087)
chr5 (414-534)||(22187239-22187359)
chr5 (354-525)||(12006329-12006502)
chr5 (349-528)||(30006285-30006463)
chr5 (373-534)||(22600408-22600569)
chr5 (433-534)||(23974735-23974835)
chr5 (446-534)||(1565385-1565473)
chr5 (404-504)||(1850624-1850723)
chr5 (446-534)||(37024647-37024735)
chr5 (369-512)||(19142959-19143101)
chr5 (409-533)||(2838733-2838857)
chr5 (414-523)||(39301089-39301197)
chr5 (402-510)||(18426017-18426125)
chr5 (403-505)||(1405170-1405272)
chr5 (462-523)||(39079875-39079935)
chr5 (397-513)||(24903740-24903856)
chr5 (369-524)||(31694124-31694278)
chr5 (360-458)||(16880654-16880752)
chr5 (351-429)||(16957373-16957451)
chr5 (414-496)||(42924895-42924977)
chr5 (369-458)||(7097776-7097864)
chr5 (411-508)||(34074620-34074717)
chr5 (353-478)||(13801767-13801894)
chr5 (394-510)||(24323746-24323862)
chr5 (394-510)||(24360370-24360486)
chr5 (362-477)||(43574617-43574732)
chr5 (369-441)||(12477136-12477209)
chr5 (402-503)||(22907914-22908014)
chr5 (469-528)||(22861782-22861841)
chr5 (397-510)||(24313617-24313732)
chr5 (397-510)||(24355954-24356069)
chr5 (450-523)||(10634243-10634315)
chr5 (451-528)||(31299592-31299669)
chr5 (462-524)||(17419878-17419940)
chr5 (480-534)||(19438703-19438757)
chr5 (394-484)||(41425952-41426042)
chr5 (406-467)||(22226070-22226130)
chr5 (481-510)||(28208235-28208264)
chr5 (455-512)||(36200168-36200225)
chr5 (354-467)||(20135625-20135740)
chr5 (433-493)||(22025538-22025598)
chr5 (472-512)||(31362454-31362494)
chr5 (353-437)||(34154814-34154898)
[»] chr3 (62 HSPs)
chr3 (352-534)||(40272811-40272993)
chr3 (353-534)||(39203492-39203671)
chr3 (354-534)||(22609743-22609921)
chr3 (351-534)||(12914033-12914216)
chr3 (347-534)||(13730596-13730785)
chr3 (352-521)||(26869696-26869864)
chr3 (372-534)||(8247706-8247870)
chr3 (364-536)||(6411833-6412004)
chr3 (350-534)||(13628787-13628974)
chr3 (352-534)||(46421033-46421218)
chr3 (352-534)||(1217066-1217246)
chr3 (369-523)||(26573115-26573268)
chr3 (351-533)||(29366718-29366902)
chr3 (403-535)||(4495714-4495846)
chr3 (354-528)||(22122918-22123090)
chr3 (352-534)||(5173718-5173902)
chr3 (351-533)||(25517168-25517353)
chr3 (369-511)||(34420659-34420802)
chr3 (352-534)||(52926218-52926391)
chr3 (370-495)||(54374362-54374488)
chr3 (411-534)||(7696945-7697066)
chr3 (446-534)||(10870044-10870132)
chr3 (350-534)||(16735417-16735600)
chr3 (352-513)||(53996564-53996726)
chr3 (363-523)||(45948848-45949010)
chr3 (413-525)||(29106535-29106646)
chr3 (397-513)||(30928191-30928307)
chr3 (352-502)||(516417-516570)
chr3 (415-534)||(9607179-9607298)
chr3 (362-513)||(19730999-19731150)
chr3 (369-499)||(33926094-33926224)
chr3 (362-515)||(19751573-19751726)
chr3 (409-523)||(45620884-45620998)
chr3 (359-507)||(7942993-7943141)
chr3 (354-512)||(33235528-33235687)
chr3 (394-499)||(45139517-45139624)
chr3 (403-499)||(54032609-54032705)
chr3 (446-534)||(12525386-12525471)
chr3 (446-508)||(39211992-39212054)
chr3 (360-478)||(14986989-14987109)
chr3 (383-511)||(25944468-25944597)
chr3 (352-437)||(54484764-54484849)
chr3 (412-512)||(26782364-26782464)
chr3 (449-513)||(53062035-53062099)
chr3 (353-478)||(31592881-31593004)
chr3 (352-524)||(829441-829612)
chr3 (446-523)||(35417904-35417980)
chr3 (353-458)||(45786214-45786321)
chr3 (446-513)||(44403649-44403716)
chr3 (353-478)||(10795423-10795550)
chr3 (404-468)||(52952528-52952592)
chr3 (352-458)||(15797274-15797378)
chr3 (352-419)||(24851300-24851367)
chr3 (352-468)||(49013472-49013590)
chr3 (409-458)||(9276316-9276365)
chr3 (446-519)||(11461734-11461807)
chr3 (352-437)||(34771363-34771448)
chr3 (397-458)||(47624094-47624154)
chr3 (462-534)||(4537007-4537079)
chr3 (488-528)||(21875002-21875042)
chr3 (469-513)||(28904940-28904984)
chr3 (369-428)||(31904872-31904932)
[»] chr1 (77 HSPs)
chr1 (352-534)||(46247952-46248134)
chr1 (359-536)||(46991779-46991956)
chr1 (351-534)||(14617015-14617198)
chr1 (352-534)||(18944620-18944805)
chr1 (369-519)||(23768336-23768486)
chr1 (350-534)||(34725095-34725277)
chr1 (347-534)||(32632551-32632737)
chr1 (369-534)||(47214488-47214651)
chr1 (359-512)||(6925099-6925252)
chr1 (349-534)||(10668197-10668389)
chr1 (349-534)||(20004086-20004273)
chr1 (350-534)||(27474258-27474441)
chr1 (413-523)||(18724605-18724714)
chr1 (349-528)||(30395722-30395903)
chr1 (402-534)||(22930118-22930248)
chr1 (359-534)||(45812543-45812716)
chr1 (362-513)||(35117774-35117928)
chr1 (352-534)||(8197020-8197202)
chr1 (382-511)||(25468292-25468421)
chr1 (362-523)||(35019219-35019378)
chr1 (397-534)||(41319850-41319987)
chr1 (410-533)||(24564322-24564445)
chr1 (352-512)||(27201646-27201808)
chr1 (401-523)||(33222972-33223094)
chr1 (352-534)||(38478281-38478461)
chr1 (360-528)||(18741964-18742136)
chr1 (350-523)||(19932750-19932922)
chr1 (359-528)||(45402078-45402248)
chr1 (349-512)||(6983807-6983968)
chr1 (381-512)||(20036219-20036351)
chr1 (351-528)||(9939443-9939624)
chr1 (351-512)||(19414438-19414597)
chr1 (414-523)||(22327088-22327196)
chr1 (351-495)||(35005139-35005285)
chr1 (402-523)||(2435835-2435956)
chr1 (373-523)||(11596502-11596650)
chr1 (414-528)||(25290146-25290267)
chr1 (409-523)||(4430082-4430196)
chr1 (373-511)||(44485129-44485267)
chr1 (441-513)||(2435981-2436053)
chr1 (462-534)||(34714600-34714672)
chr1 (453-513)||(52910215-52910275)
chr1 (403-534)||(10163736-10163867)
chr1 (414-513)||(17470407-17470506)
chr1 (347-437)||(23796539-23796629)
chr1 (352-497)||(35253186-35253329)
chr1 (352-528)||(12126836-12127010)
chr1 (382-513)||(27136680-27136812)
chr1 (469-537)||(40424716-40424784)
chr1 (352-439)||(1517310-1517397)
chr1 (369-511)||(19701570-19701713)
chr1 (446-501)||(31272467-31272522)
chr1 (352-467)||(31382213-31382327)
chr1 (369-495)||(45264415-45264542)
chr1 (414-523)||(50811928-50812037)
chr1 (353-450)||(4349699-4349796)
chr1 (403-528)||(18335338-18335463)
chr1 (409-525)||(34679275-34679390)
chr1 (447-534)||(22151481-22151568)
chr1 (414-500)||(19974136-19974221)
chr1 (470-528)||(21006127-21006185)
chr1 (414-525)||(49545964-49546078)
chr1 (415-512)||(50760288-50760385)
chr1 (462-513)||(10378834-10378885)
chr1 (362-512)||(15511157-15511310)
chr1 (421-523)||(18335914-18336016)
chr1 (421-511)||(39215027-39215117)
chr1 (397-458)||(21910693-21910753)
chr1 (402-467)||(34149009-34149074)
chr1 (414-510)||(19656167-19656263)
chr1 (448-512)||(25554817-25554881)
chr1 (369-440)||(28894574-28894645)
chr1 (465-523)||(6358123-6358180)
chr1 (447-517)||(21723658-21723727)
chr1 (421-507)||(49722641-49722726)
chr1 (481-525)||(13082387-13082431)
chr1 (414-478)||(22324926-22324989)
[»] chr8 (49 HSPs)
chr8 (350-534)||(44530103-44530287)
chr8 (350-534)||(39460991-39461177)
chr8 (352-534)||(35261633-35261815)
chr8 (348-534)||(36720750-36720936)
chr8 (352-534)||(28817625-28817807)
chr8 (360-534)||(12670257-12670429)
chr8 (359-534)||(29521691-29521866)
chr8 (359-523)||(18164766-18164929)
chr8 (397-535)||(20869544-20869678)
chr8 (352-534)||(30454096-30454276)
chr8 (353-523)||(17823541-17823711)
chr8 (353-534)||(13160656-13160836)
chr8 (369-523)||(44781520-44781675)
chr8 (354-534)||(45071219-45071398)
chr8 (360-534)||(7136534-7136710)
chr8 (382-513)||(22598132-22598263)
chr8 (352-522)||(8897763-8897933)
chr8 (352-528)||(20284068-20284248)
chr8 (351-534)||(12625843-12626027)
chr8 (352-528)||(21070696-21070877)
chr8 (350-506)||(31457155-31457310)
chr8 (351-534)||(26954086-26954272)
chr8 (352-528)||(25250482-25250660)
chr8 (369-534)||(2626473-2626641)
chr8 (352-523)||(6760787-6760960)
chr8 (352-478)||(5135289-5135414)
chr8 (412-534)||(40604964-40605086)
chr8 (362-523)||(8483947-8484107)
chr8 (446-523)||(28407381-28407458)
chr8 (383-511)||(24365089-24365218)
chr8 (462-534)||(24245405-24245477)
chr8 (446-533)||(11748254-11748341)
chr8 (404-509)||(35105902-35106008)
chr8 (363-489)||(389642-389770)
chr8 (402-513)||(11000998-11001110)
chr8 (397-523)||(42083742-42083868)
chr8 (439-523)||(30962859-30962942)
chr8 (363-478)||(5689641-5689756)
chr8 (413-523)||(14018029-14018138)
chr8 (397-502)||(23000263-23000365)
chr8 (413-510)||(36918102-36918199)
chr8 (369-467)||(29877115-29877213)
chr8 (473-523)||(31454153-31454203)
chr8 (346-427)||(26102578-26102659)
chr8 (352-416)||(16013528-16013592)
chr8 (402-513)||(44742567-44742679)
chr8 (352-458)||(10857858-10857965)
chr8 (397-437)||(19729391-19729431)
chr8 (352-457)||(20869954-20870061)
[»] chr2 (58 HSPs)
chr2 (350-534)||(8455313-8455497)
chr2 (353-534)||(25079717-25079899)
chr2 (349-534)||(21779257-21779440)
chr2 (351-534)||(9671134-9671316)
chr2 (353-534)||(14530272-14530455)
chr2 (353-533)||(10543653-10543835)
chr2 (384-534)||(12023950-12024099)
chr2 (350-528)||(11514396-11514573)
chr2 (369-528)||(19977730-19977889)
chr2 (352-518)||(24200622-24200790)
chr2 (352-528)||(25249737-25249912)
chr2 (353-534)||(23397720-23397899)
chr2 (352-517)||(17667973-17668138)
chr2 (351-522)||(39914304-39914475)
chr2 (352-503)||(25641487-25641637)
chr2 (359-534)||(7214488-7214665)
chr2 (352-497)||(10546153-10546299)
chr2 (352-497)||(14444720-14444864)
chr2 (352-517)||(17623535-17623700)
chr2 (352-528)||(17896219-17896396)
chr2 (412-508)||(17380296-17380391)
chr2 (353-512)||(40416871-40417030)
chr2 (416-534)||(17705449-17705567)
chr2 (352-535)||(26684619-26684804)
chr2 (397-513)||(21377117-21377233)
chr2 (373-512)||(32781308-32781447)
chr2 (351-510)||(5841006-5841167)
chr2 (397-534)||(22371011-22371145)
chr2 (362-523)||(4516360-4516520)
chr2 (402-510)||(5450263-5450372)
chr2 (446-510)||(44604832-44604896)
chr2 (409-528)||(27573581-27573699)
chr2 (352-510)||(31158438-31158598)
chr2 (366-511)||(99278-99421)
chr2 (403-513)||(23145748-23145858)
chr2 (403-513)||(23557538-23557648)
chr2 (352-473)||(30826052-30826171)
chr2 (373-513)||(33795260-33795400)
chr2 (446-513)||(29419982-29420049)
chr2 (394-513)||(44521414-44521533)
chr2 (402-503)||(31821392-31821491)
chr2 (448-533)||(14544018-14544103)
chr2 (363-523)||(24859998-24860156)
chr2 (352-472)||(36871509-36871627)
chr2 (365-516)||(45235829-45235981)
chr2 (351-512)||(44643498-44643660)
chr2 (353-453)||(25632544-25632644)
chr2 (485-528)||(27466262-27466305)
chr2 (488-534)||(39189556-39189602)
chr2 (369-499)||(19614981-19615112)
chr2 (446-510)||(17472949-17473013)
chr2 (287-326)||(16542505-16542544)
chr2 (363-492)||(17471544-17471675)
chr2 (349-416)||(23488555-23488622)
chr2 (469-523)||(35017783-35017837)
chr2 (369-427)||(24890472-24890530)
chr2 (445-511)||(34752754-34752820)
chr2 (353-467)||(40762234-40762348)
[»] scaffold0057 (3 HSPs)
scaffold0057 (352-523)||(46796-46967)
scaffold0057 (352-534)||(24771-24948)
scaffold0057 (469-511)||(46999-47041)
[»] chr4 (75 HSPs)
chr4 (359-534)||(21646918-21647095)
chr4 (354-534)||(6430627-6430806)
chr4 (352-534)||(48598824-48599004)
chr4 (352-534)||(5648213-5648394)
chr4 (353-534)||(20224938-20225117)
chr4 (352-534)||(30639334-30639515)
chr4 (369-534)||(37494805-37494970)
chr4 (383-534)||(5306694-5306844)
chr4 (352-534)||(47528529-47528709)
chr4 (372-537)||(10660355-10660521)
chr4 (372-537)||(10874500-10874666)
chr4 (349-512)||(14983810-14983973)
chr4 (352-534)||(23501747-23501925)
chr4 (350-528)||(16911522-16911702)
chr4 (352-513)||(35567145-35567306)
chr4 (372-508)||(17043413-17043549)
chr4 (352-534)||(11054147-11054327)
chr4 (352-523)||(16408600-16408773)
chr4 (397-523)||(54966987-54967111)
chr4 (369-505)||(41018810-41018945)
chr4 (403-505)||(7385526-7385628)
chr4 (363-512)||(19027824-19027973)
chr4 (364-528)||(54730209-54730376)
chr4 (446-528)||(17315391-17315473)
chr4 (354-512)||(40915805-40915962)
chr4 (448-513)||(487230-487295)
chr4 (397-502)||(25463108-25463213)
chr4 (446-523)||(42164241-42164317)
chr4 (371-512)||(25343163-25343306)
chr4 (397-525)||(47441574-47441701)
chr4 (352-510)||(9832312-9832468)
chr4 (418-513)||(39029126-39029221)
chr4 (405-507)||(39077848-39077948)
chr4 (352-512)||(47443929-47444093)
chr4 (359-496)||(29207904-29208039)
chr4 (353-512)||(44363130-44363291)
chr4 (353-535)||(55766466-55766648)
chr4 (362-476)||(9987843-9987957)
chr4 (415-534)||(13256463-13256578)
chr4 (371-522)||(49938611-49938759)
chr4 (404-528)||(14590797-14590922)
chr4 (352-457)||(25629080-25629185)
chr4 (369-523)||(30581481-30581636)
chr4 (369-510)||(30690192-30690340)
chr4 (411-523)||(30496380-30496490)
chr4 (397-510)||(32478835-32478942)
chr4 (447-512)||(43035224-43035289)
chr4 (446-523)||(54640432-54640508)
chr4 (352-467)||(20639657-20639773)
chr4 (352-508)||(54175043-54175201)
chr4 (369-535)||(55830737-55830903)
chr4 (446-528)||(30352684-30352766)
chr4 (413-497)||(10380003-10380086)
chr4 (463-523)||(49938548-49938608)
chr4 (416-523)||(51420539-51420646)
chr4 (397-523)||(8473666-8473790)
chr4 (414-500)||(7038041-7038126)
chr4 (369-513)||(20908652-20908798)
chr4 (412-511)||(3580899-3580994)
chr4 (352-484)||(10277756-10277886)
chr4 (480-537)||(20405044-20405101)
chr4 (472-528)||(5313113-5313169)
chr4 (446-510)||(23580301-23580365)
chr4 (472-533)||(20373913-20373974)
chr4 (446-523)||(36589710-36589785)
chr4 (397-457)||(7909325-7909384)
chr4 (363-458)||(51865048-51865143)
chr4 (462-512)||(11579820-11579870)
chr4 (353-415)||(25388249-25388311)
chr4 (446-512)||(41549358-41549424)
chr4 (469-523)||(50856352-50856405)
chr4 (472-513)||(12257712-12257753)
chr4 (491-528)||(18969701-18969738)
chr4 (451-503)||(32629366-32629418)
chr4 (352-424)||(38786673-38786745)
[»] chr6 (39 HSPs)
chr6 (342-534)||(1354746-1354936)
chr6 (352-523)||(12221913-12222087)
chr6 (352-536)||(1346916-1347098)
chr6 (352-534)||(29355854-29356039)
chr6 (352-520)||(2166409-2166579)
chr6 (352-520)||(2178042-2178212)
chr6 (352-534)||(9161077-9161260)
chr6 (414-523)||(14553477-14553585)
chr6 (446-534)||(14975173-14975261)
chr6 (352-534)||(1941809-1941991)
chr6 (413-511)||(32728216-32728314)
chr6 (403-528)||(3815127-3815252)
chr6 (352-503)||(18277192-18277343)
chr6 (420-534)||(8409197-8409311)
chr6 (409-523)||(13905035-13905148)
chr6 (369-510)||(32068074-32068213)
chr6 (413-528)||(20400627-20400742)
chr6 (446-528)||(24734593-24734675)
chr6 (469-534)||(33922944-33923009)
chr6 (369-523)||(7947387-7947541)
chr6 (414-512)||(2755485-2755583)
chr6 (417-513)||(12889401-12889497)
chr6 (353-496)||(17432332-17432483)
chr6 (433-510)||(22967149-22967225)
chr6 (402-502)||(23240873-23240971)
chr6 (433-510)||(23821168-23821244)
chr6 (397-536)||(15866083-15866220)
chr6 (397-510)||(28007604-28007717)
chr6 (415-534)||(6024187-6024306)
chr6 (446-528)||(12063427-12063509)
chr6 (446-522)||(3116216-3116299)
chr6 (350-528)||(23930124-23930301)
chr6 (396-477)||(12228369-12228450)
chr6 (462-518)||(8417442-8417498)
chr6 (403-483)||(33138838-33138918)
chr6 (480-523)||(19649294-19649337)
chr6 (351-416)||(12885985-12886050)
chr6 (352-425)||(13267788-13267861)
chr6 (352-467)||(26097181-26097294)
[»] scaffold0258 (1 HSPs)
scaffold0258 (352-528)||(13023-13198)
[»] scaffold0168 (1 HSPs)
scaffold0168 (352-535)||(30532-30713)
[»] scaffold0254 (1 HSPs)
scaffold0254 (415-520)||(4125-4230)
[»] scaffold1176 (1 HSPs)
scaffold1176 (349-512)||(1584-1744)
[»] scaffold0311 (1 HSPs)
scaffold0311 (359-523)||(10775-10939)
[»] scaffold0187 (4 HSPs)
scaffold0187 (359-528)||(10056-10223)
scaffold0187 (359-528)||(20384-20551)
scaffold0187 (469-534)||(8899-8964)
scaffold0187 (469-534)||(19227-19292)
[»] scaffold0049 (1 HSPs)
scaffold0049 (353-528)||(58937-59114)
[»] scaffold0024 (1 HSPs)
scaffold0024 (462-534)||(83829-83901)
[»] scaffold0223 (1 HSPs)
scaffold0223 (353-523)||(11097-11264)
[»] scaffold0036 (1 HSPs)
scaffold0036 (384-535)||(35048-35201)
[»] scaffold0005 (1 HSPs)
scaffold0005 (404-528)||(226456-226581)
[»] scaffold0116 (1 HSPs)
scaffold0116 (446-512)||(8867-8933)
[»] scaffold0167 (1 HSPs)
scaffold0167 (383-523)||(23569-23704)
[»] scaffold0015 (1 HSPs)
scaffold0015 (351-478)||(48632-48757)
[»] scaffold0031 (1 HSPs)
scaffold0031 (446-520)||(43097-43171)
[»] scaffold0018 (1 HSPs)
scaffold0018 (353-523)||(72867-73031)
[»] scaffold0194 (1 HSPs)
scaffold0194 (462-510)||(24642-24690)
[»] scaffold0180 (1 HSPs)
scaffold0180 (352-437)||(24132-24217)
[»] scaffold0028 (1 HSPs)
scaffold0028 (413-513)||(32905-33005)


Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 364
Target Start/End: Complemental strand, 7193498 - 7193143
Alignment:
Q  9 cgcacaagtcagaagtcgacaattttgtattttcaattagacaaaaggtttatgatatgatgcaaaaattcaaaccactataactacaccctccatcact 108  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  7193498 cgcacaagtcagaagtcgacaattttgttttttcaattagacaaaaggtttatgatatgatgcaaaagttcaaaccactgtaattacaccctccatcact 7193399  T
Q  109 tgccaattgtcattcccactatgacaatgtcttaannnnnnncattcctgccatcttaaagttcagtgaggactaatgaatgatgttgctgggatatgaa 208  Q
    |||||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7193398 tgccaattgtcattcccactatgacaatgtcttaatttttttcattcccgccatcttaaagttcagtgaggactaatgaatgatgttgctgggatatgaa 7193299  T
Q  209 taggagtctcactgagctacatgattttattgagttaagaacaatcatataaatgaattgttcatcacattttcatttaaaatcttaagacaatgagttt 308  Q
     |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  7193298 gaggagtctcactaagctacatgattttattgagttaacaacaatcatataaatgaattgttcttcatattttcatttaaagtcttaagacaatgagttt 7193199  T
Q  309 ataagtcctcctatttatttgttgctcaaactcttcttctaataaaaggacaaccc 364  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||    
T  7193198 ataagtcctcatatttatttgttgctcaaattcttcttctaataaaagggcaaccc 7193143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 354 - 521
Target Start/End: Original strand, 11617589 - 11617756
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacaca 453  Q
    |||| ||||||||| |||||||| || |||||||||| | ||  ||| |||||| |||||||||||||||||||| ||  |||| ||| || ||||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 11617688  T
Q  454 agaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgcc 521  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11617689 agaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 32758395 - 32758215
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| ||||||||||||||||||||||| ||||| ||| ||  |||||    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtt--ttaca 32758298  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  32758297 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 32758215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 350 - 512
Target Start/End: Original strand, 33871908 - 33872068
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| ||||| ||| |||||||||||| |||||| || | ||||||| |||||| |||||||||||||||||||| || ||||||||| || ||||    
T  33871908 ataaaagg-caacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtt-ttta 33872005  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  33872006 cacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacc 33872068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 351 - 534
Target Start/End: Original strand, 21172007 - 21172188
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  ||||    
T  21172007 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttac 21172104  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||    
T  21172105 acaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 21172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 534
Target Start/End: Original strand, 2541026 - 2541201
Alignment:
Q  360 aacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggt 459  Q
    |||||||| |||||||||||  ||||||||| |  | |||| |||||| ||||||||||||||| |||| || ||||| ||| || |||||||||||||     
T  2541026 aacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggc 2541125  T
Q  460 tatttccaagacttgaacctgtgaccttt-cagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    | |||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  2541126 tgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 2541201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 353 - 534
Target Start/End: Original strand, 48735122 - 48735302
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| | | ||  ||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgtt--ttacac 48735219  T
Q  453 aagaggttatttccaag-acttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  48735220 aagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 48735302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 42805662 - 42805478
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  ||||| ||  | || |||| |||||| |||||||  |||||||||||||||| ||||| ||| || ||||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttta 42805563  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||| |||||| |||| |||||    
T  42805562 cacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctc 42805478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 352 - 523
Target Start/End: Original strand, 19426889 - 19427059
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||| ||||||| ||||| ||| | || | || ||| || |||||||||||||||||||| ||  |||| |||||| ||||||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctattttttaca 19426987  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||| | |||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  19426988 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 534
Target Start/End: Original strand, 35334823 - 35334995
Alignment:
Q  360 aacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggt 459  Q
    |||||||| ||||||||||| |||||||||| | || |||| |||||| ||||||| |||||||||||||||  |||| ||| || ||||||| |||       
T  35334823 aacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacacgagac-- 35334920  T
Q  460 tatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    | |||||| |||||||||  |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  35334921 tgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 35334995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 42798805 - 42798623
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||| | ||||| |||||  ||||| ||| | || ||||  ||||| |||||||||||||||||||| || ||||| | | || ||||||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttaca 42798706  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||  | ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  42798705 caagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 42798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 353 - 523
Target Start/End: Original strand, 10693073 - 10693241
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| |||||| || ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  ||||||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctt--ttacac 10693170  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  10693171 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaa 10693241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 352 - 523
Target Start/End: Complemental strand, 27629770 - 27629599
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||| |||||   ||||| ||| |  | |||| |||||| |||||||||||||||| ||| |||||||| ||| || ||||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttaca 27629671  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||| | |||||| |||||||||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  27629670 caagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaa 27629599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 369 - 533
Target Start/End: Original strand, 8148962 - 8149126
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttcca 467  Q
    ||||||| |||| ||||||||||| ||||||| |||||| |||||||||||||||||||| |||||||| |||||| ||| |||||||||||  ||| ||    
T  8148962 cactaaaactctcgcatacgcaag-tctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttca 8149060  T
Q  468 agacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
     |||||||||  ||||| || |||||||||||||||||| ||||| |||| ||||| |||| ||||    
T  8149061 ggacttgaactcgtgactttgcagtcacatgacaacaacattaccagttgtgccaaggttacccct 8149126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 46354287 - 46354148
Alignment:
Q  397 gggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtca 494  Q
    |||| |||||| |||||||  ||||||||||||| || ||||| ||| || ||||||||||||||| |||||| |||||||||| |||||||| || |||    
T  46354287 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatca 46354188  T
Q  495 catgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||||||||| |||||||||| |||| |||||    
T  46354187 catgacaacaactttaccagttgcgccaaggttacccctc 46354148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 534
Target Start/End: Original strand, 47077898 - 47078034
Alignment:
Q  396 tgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcac 495  Q
    ||||| |||||| |||||||| ||||||||||| |||| |||  |||||  |||||||||||  | |||||| |||||||||| ||||||||||||||||    
T  47077898 tgggaaggggtcccaccattttgtgtattgtacgcaactttactctatt--ttacacaagagactgtttccaggacttgaacccgtgacctttcagtcac 47077995  T
Q  496 atgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||||||| |||||||||| |||| |||||    
T  47077996 atgacaacaactttaccagttgcgccaaggttacccctc 47078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 369 - 523
Target Start/End: Original strand, 23419690 - 23419843
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||||||| |  ||| ||||||| ||| ||| |||||| |||||||||||||||||||| ||  |||| ||| || ||||||||||||| | ||||||     
T  23419690 cactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccag 23419789  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
     ||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  23419790 aacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgccaa 23419843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 529
Target Start/End: Complemental strand, 40464013 - 40463836
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| |||| |||| |||| ||||||  ||||||||| | || | || |||||| |||||||||||||||| ||| || ||||| ||  || |||||    
T  40464013 taaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtt-tttac 40463915  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttat 529  Q
    |||||||  | |||| | |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  40463914 acaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggttat 40463836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 43557611 - 43557426
Alignment:
Q  352 aaaaggacaacccggtacactaaa-gctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    |||||| ||||||||| ||||||| ||||  |||||||||   || |||| |||||| |||||||  ||||||||||||| || |||||  || || |||    
T  43557611 aaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttttt 43557512  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||| | |||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||| ||| |||| |||||    
T  43557511 acacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaaggttacccctc 43557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 28362175 - 28362314
Alignment:
Q  383 catacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtg 482  Q
    |||| ||||| ||||||| |||||| |||||||||||||||||||| || ||||| |   || |||||||||||||   |||| | ||||||||||||||    
T  28362175 catatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtg 28362274  T
Q  483 acctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  28362275 acctttcagccacatgacaacaactttacc-gttgcgccaa 28362314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 352 - 506
Target Start/End: Original strand, 42391099 - 42391251
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  |||||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttaca 42391196  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaac 506  Q
    ||||| | | |||||| |||||||||| |||||||||||||||||||||||||||    
T  42391197 caagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 19265905 - 19265781
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| |||||||||||||||||||| || ||||| ||| || |||||||||| || | | ||||||||||||||| ||||||||||||||||     
T  19265905 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctctt-tttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacg 19265807  T
Q  497 tgacaacaactttaccggttgcgccaa 523  Q
    |||||||||||||||| ||||||||||    
T  19265806 tgacaacaactttacc-gttgcgccaa 19265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 34626207 - 34626388
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||| |  ||||||||||  ||||||||| | || |||| ||| || ||||||||||||||||| || || ||||| ||| || ||||||    
T  34626207 aaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtt-tttaca 34626305  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    || |||| | |||||| |||||||| ||||| ||||||| ||||||||||||||||||||| ||||||| || |||| |||||    
T  34626306 caggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggttacccctc 34626388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 441 - 537
Target Start/End: Complemental strand, 7193132 - 7193036
Alignment:
Q  441 tattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctccaa 537  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||||||||||||||||||||||||||  ||| |||||| |||| ||||||||    
T  7193132 tattgtttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttacccctccaa 7193036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 397 - 513
Target Start/End: Original strand, 14099050 - 14099166
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| |||||||||||||||||||| ||  |||| ||| || ||||||||| ||| |||||||| ||||| ||||  ||||||||||||||||    
T  14099050 gggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcaca 14099149  T
Q  497 tgacaacaactttaccg 513  Q
    |||||||||||||||||    
T  14099150 tgacaacaactttaccg 14099166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 397 - 513
Target Start/End: Original strand, 14409067 - 14409183
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| |||||||||||||||||||| ||  |||| ||| || ||||||||| ||| |||||||| ||||| ||||  ||||||||||||||||    
T  14409067 gggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcaca 14409166  T
Q  497 tgacaacaactttaccg 513  Q
    |||||||||||||||||    
T  14409167 tgacaacaactttaccg 14409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 534
Target Start/End: Complemental strand, 47716596 - 47716413
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||||| ||| |||||||  ||||| ||  | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 47716497  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||| |||||||||| |||||||| |||||||||| |||||||||| || |||| ||||| |||| |||||    
T  47716496 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttacccctc 47716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 12473378 - 12473269
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||||| || ||||| ||| || || |||||||||||| ||| || ||||||||||  |||||||||||  ||||||||||||||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccg 12473279  T
Q  514 gttgcgccaa 523  Q
    ||||||||||    
T  12473278 gttgcgccaa 12473269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 404 - 512
Target Start/End: Complemental strand, 13805185 - 13805078
Alignment:
Q  404 ggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaac 503  Q
    |||| ||||||||||||||||||||||| ||||| ||  |  ||||||| ||||| |||||||| |||||||||| || |||||||||||||||||||||    
T  13805185 ggtcccaccatttggtgtattgtacacagcctta-cccctgttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaac 13805087  T
Q  504 aactttacc 512  Q
    |||||||||    
T  13805086 aactttacc 13805078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 414 - 534
Target Start/End: Original strand, 22699031 - 22699151
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||||| ||  |||| ||| || ||||||||||||  |||||||| ||||||||||  | ||||||||||||||||||||||||||||||     
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttacca 22699130  T
Q  514 gttgcgccaaagttatccctc 534  Q
    |||||| ||| |||| |||||    
T  22699131 gttgcgtcaaggttacccctc 22699151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 352 - 487
Target Start/End: Complemental strand, 7879774 - 7879639
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||| ||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| | | || ||||||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttaca 7879675  T
Q  452 caagaggttatttccaagacttgaacctgtgacctt 487  Q
    |||||| || |||||| |||||||||| ||||||||    
T  7879674 caagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 403 - 534
Target Start/End: Original strand, 2662985 - 2663112
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| |||||||||||||||||||| || ||||| |||||  ||||||||||||| | |||||| ||||||||||| ||||  | ||||||||| ||||    
T  2662985 gggtcccaccatttggtgtattgtacgcagccttaccctat--tttacacaagaggctgtttccaggacttgaacctatgac--tccagtcacataacaa 2663080  T
Q  503 caactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||  |||||||||| |||| |||||    
T  2663081 caactttactagttgcgccaaggttacccctc 2663112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 349 - 489
Target Start/End: Original strand, 18512449 - 18512588
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||| ||| |||||| || ||| |||||||  ||||||||| | || |||| |||||| ||||||| |||||||||||| || ||||| |||||| |||    
T  18512449 aataacagggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatt-ttt 18512547  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttc 489  Q
    |||||||| ||| |||||| |||||||||| ||||||||||    
T  18512548 acacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 354 - 513
Target Start/End: Complemental strand, 29907552 - 29907392
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacac 452  Q
    |||| ||||||||| |||||||||||  ||||||  | | || |||| |||||| |||||||| ||||||||| || || |||||  ||||| |||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacac 29907455  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatg--acaacaactttaccg 513  Q
    |||||| | |||| | |||||||||| |||||||||||||||||||  |||||||||||||||    
T  29907454 aagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttaccg 29907392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 42495928 - 42496016
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||| |||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||    
T  42495928 tttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctc 42496016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 19266556 - 19266425
Alignment:
Q  382 gcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgt 481  Q
    ||||||||| | || |||| ||| || ||| |||||||||||||||| || ||||| ||| || ||||| |||| || ||||| || ||||||||||       
T  19266556 gcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccac 19266457  T
Q  482 gacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||||||||||||||||||||||    
T  19266456 gacctttcagtcacatgacaacaactttaccg 19266425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 534
Target Start/End: Complemental strand, 42476957 - 42476827
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||| |||||||||||||||||||| || ||||| | | ||  |||||||||||  | ||||||  ||||||| | ||||||||| ||||||||||||    
T  42476957 ggggtcccaccatttggtgtattgtacgcagccttaccttgtt--ttacacaagagactgtttccagaacttgaatccgtgaccttttagtcacatgaca 42476860  T
Q  502 acaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| ||| |||||| |||| |||||    
T  42476859 acaactttaccagttacgccaatgttacccctc 42476827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 523
Target Start/End: Original strand, 48123533 - 48123653
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||| |||||||||||||||||||  ||   ||| ||| || ||||||||||||| | |||||| ||||||||||  ||||||||||| ||||||| |    
T  48123533 ggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgata 48123632  T
Q  502 acaactttaccggttgcgccaa 523  Q
    ||||||||||| ||||||||||    
T  48123633 acaactttacc-gttgcgccaa 48123653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 354 - 509
Target Start/End: Complemental strand, 11741927 - 11741774
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacaca 453  Q
    |||| ||||||||| ||||| |||||  ||||  |||  ||| |||| ||| || |||||||||||||||||||| || ||||| ||||||  ||||||     
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctatt--ttacact 11741830  T
Q  454 agaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttt 509  Q
    ||| | | ||| || ||||||||||  |||||||||||||||||||||||||||||    
T  11741829 agaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 414 - 533
Target Start/End: Original strand, 5180218 - 5180337
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||||| |||||||||  |||| ||| || || |||||||||| | ||||||  | |||||||  ||||||||||||||||||||||||||||||||     
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttacca 5180317  T
Q  514 gttgcgccaaagttatccct 533  Q
    |||||| ||| |||| ||||    
T  5180318 gttgcgtcaaggttacccct 5180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 446 - 533
Target Start/End: Complemental strand, 18327076 - 18326989
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
    ||||||||||||| | |||||  |||||||||| ||||||||  ||||||||||||||||||||||| |||||||||| |||| ||||    
T  18327076 tttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttacccct 18326989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 491
Target Start/End: Original strand, 31591105 - 31591245
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||||| ||||||||| ||||| |||||  ||||| ||||| || |||| |||||| ||||||||  |||||||||| || |||||  || ||  ||    
T  31591105 aataaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctgtt--tt 31591202  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcag 491  Q
    |||||||||||| |||||| |||||||||  ||||||||||||    
T  31591203 acacaagaggttgtttccaggacttgaactcgtgacctttcag 31591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 433 - 523
Target Start/End: Complemental strand, 5814526 - 5814436
Alignment:
Q  433 ccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||| |||||| |||||| |||||||| ||||||| ||||||||| ||||| || || |||||| ||||||||||||||| |||||||||    
T  5814526 ccttaccctattttttacataagaggttctttccaaaacttgaacccgtgactttccaatcacataacaacaactttaccgattgcgccaa 5814436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 414 - 512
Target Start/End: Complemental strand, 7645030 - 7644932
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||||| | | |||| ||| || ||||||||||||| | |||||| |||||||||| |||||||||||||||| | ||||||| ||||||    
T  7645030 tttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacc 7644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 497
Target Start/End: Original strand, 38262195 - 38262340
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||| ||||| |||||||||||  |||||||||   |  |||| |||||| || ||||||||||||||||  |||| ||| | |||| ||||||    
T  38262195 aaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttaca 38262294  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacat 497  Q
    ||||||  | |||||| |||||||||| |||||||| |||||||||    
T  38262295 caagagactgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 523
Target Start/End: Original strand, 3469238 - 3469348
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgttt--acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    ||||||||||||||| ||||| || ||| || |||  |||||||||  | |||| | |||||||  ||||||||||||||||||||||||||||||||||    
T  3469238 tttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttac 3469337  T
Q  512 cggttgcgccaa 523  Q
    | ||||||||||    
T  3469338 c-gttgcgccaa 3469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 476
Target Start/End: Complemental strand, 1408564 - 1408469
Alignment:
Q  381 tgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaa 476  Q
    |||||||||| | || |||| |||||| ||||||||| ||||||||||||| ||||| | | || ||||||||||||| |||||||| ||||||||    
T  1408564 tgcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 362 - 512
Target Start/End: Complemental strand, 22065713 - 22065564
Alignment:
Q  362 cccggtacactaaagctcttgcatacgca-agatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtt 460  Q
    |||||||||||||| ||| ||||||| || || || |||| |||||||||| ||||| | |||||||  || | ||| |||||| |||||||||||||||    
T  22065713 cccggtacactaaaactcctgcatacacatagttc-gggaaggggtctcactatttgctttattgtatgcagctttaccctatt-tttacacaagaggtt 22065616  T
Q  461 atttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
     ||||||| ||||||||   |||| ||||| |||| ||||||||||||||||    
T  22065615 gtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacc 22065564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 7794599 - 7794673
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgc 520  Q
    |||||| |||||| | |||||| |||||||||| |||||||| ||||||||| |||||||||||||| |||||||    
T  7794599 tttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgc 7794673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 14732931 - 14732997
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  14732931 tttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggtta 14732997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 522
Target Start/End: Original strand, 28078151 - 28078300
Alignment:
Q  372 taaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagac 471  Q
    ||||||||| ||||| ||| |||  |||| |||||| ||||||||||||||||| |  |||||||| ||| || |||  ||| |||  | |||| | |||    
T  28078151 taaagctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgttttttt-acacgagactgtttctaggac 28078249  T
Q  472 ttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgcca 522  Q
    ||||||| |||||||| |||||||||||||||||||| ||  |||||||||    
T  28078250 ttgaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgcca 28078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 502
Target Start/End: Complemental strand, 18747613 - 18747472
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatccta-ttgtttacacaagaggtt 460  Q
    |||||| |||||||||||  ||||||||| | |   ||| |||||| ||||| |||||||||| ||| || ||||| |||  || ||||||||| ||| |    
T  18747613 cccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggct 18747514  T
Q  461 atttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
     |||||||||||||| || |||||||||||||||| ||||||    
T  18747513 gtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 23618976 - 23619061
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaacctta 437  Q
    |||||| ||||||| | ||||||||||| |||| ||||||| |||| || |||||| ||||||||| |||||||||||||| ||||    
T  23618976 aaaagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtacacaagctta 23619061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 537
Target Start/End: Complemental strand, 21447632 - 21447541
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctccaa 537  Q
    ||||||||||||| | ||| ||||||||||| | |||||||| || | |||||||||||| |||| | |||||||||| |||| ||||||||    
T  21447632 tttacacaagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggttacccctccaa 21447541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 35787267 - 35787373
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| || | ||||||  ||||||||||| || |||| |||||| | |||||||||||||||||| |||||||| | | || |||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtt-tttac 35787365  T
Q  451 acaagagg 458  Q
    ||||||||    
T  35787366 acaagagg 35787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 1424019 - 1424085
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||| || ||||| | |||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  1424019 tttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 511
Target Start/End: Complemental strand, 6736968 - 6736867
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    |||||||||||||||||||  ||  |||| | | || |||| |||||||||| |||  | |||||||||| |||||||||||||| ||||||||||||||    
T  6736968 caccatttggtgtattgtatgcagtcttaccttgtt-tttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactt 6736870  T
Q  509 tac 511  Q
    |||    
T  6736869 tac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 523
Target Start/End: Original strand, 29140460 - 29140530
Alignment:
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||| || ||| ||| |||||||  |||||||||||||| ||||||||||||||||||| ||||||||||    
T  29140460 aagagattgttttcaaaacttgaatgtgtgacctttcagttacatgacaacaactttaccagttgcgccaa 29140530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 505
Target Start/End: Original strand, 32233191 - 32233286
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaa 505  Q
    |||||||||||||| | ||| |  ||||| ||| || ||||||||||||||| |||||| ||||||||||  ||||||||||||||  |||||||||    
T  32233191 caccatttggtgtaatatacgctgccttaccctgtt-tttacacaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 414 - 513
Target Start/End: Complemental strand, 16341352 - 16341253
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||||||||||||  | ||||| ||| || ||||||||||||| | |||| |  ||||||||| |||||||||||   |||||| |||||||||||||    
T  16341352 tttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttaccg 16341253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 467
Target Start/End: Complemental strand, 38604642 - 38604548
Alignment:
Q  372 taaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    ||||||||  ||||||||| | || || | ||||||||||||||||||||||||||| || ||||| ||| || ||||||||||||| | ||||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttcca 38604548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 513
Target Start/End: Original strand, 44123714 - 44123781
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||| | ||||||  ||||||||| || | ||||||||||||||||| |||||||||||    
T  44123714 tttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttaccg 44123781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 513
Target Start/End: Original strand, 1524281 - 1524346
Alignment:
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||| | |||  ||||||||||| ||||||||||||||| | ||||||| |||||||||    
T  1524281 tacacaagaggctgtttataagacttgaacttgtgacctttcagtctcgtgacaaccactttaccg 1524346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 497
Target Start/End: Complemental strand, 23223757 - 23223669
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacat 497  Q
    ||||||| | |||||||||| |||||||||  |||| ||||||||||||| | ||| || ||||  ||||||||||||| | |||||||    
T  23223757 caccattcgatgtattgtacgcaaccttattttattttttacacaagaggctcttttcaggactctaacctgtgaccttccggtcacat 23223669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 27889315 - 27889391
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtac 428  Q
    |||||| |||||||||  || |||||||  ||||||||| | || |||| |||||| ||||||||||||||||||||    
T  27889315 aaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 27889391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 490
Target Start/End: Complemental strand, 35203513 - 35203437
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttca 490  Q
    |||||| |||||||| ||  |||||||| || ||||||||||||  | |||||| |||||||||| |||||||||||    
T  35203513 tttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 42101985 - 42102045
Alignment:
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||| | |||||| ||||||||| | ||||||| ||||||| |||||||||||||||||    
T  42101985 aagaggctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttaccg 42102045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 512
Target Start/End: Complemental strand, 39123909 - 39123866
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||| ||| | |||||||||||||||||||||||||||    
T  39123909 gacttgaacccgtgtcgtttcagtcacatgacaacaactttacc 39123866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 480 - 528
Target Start/End: Original strand, 28685261 - 28685309
Alignment:
Q  480 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||| |||||||||||||||||||||||||| | ||||| | |||||||    
T  28685261 gtgatctttcagtcacatgacaacaactttaacagttgcactaaagtta 28685309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 8e-50; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 352 - 536
Target Start/End: Complemental strand, 24449026 - 24448842
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||||||||| |||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| |||||| ||||||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttaca 24448927  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcca 536  Q
    ||| ||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||||    
T  24448926 caaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctcca 24448842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 528
Target Start/End: Original strand, 4619100 - 4619281
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgt 446  Q
    ||||||||| ||||||||| |||||||||||| ||||| ||  | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |    
T  4619100 aataaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 4619199  T
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  4619200 ttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 4619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 351 - 534
Target Start/End: Complemental strand, 38879720 - 38879535
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||    
T  38879720 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 38879621  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    | |||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  38879620 atacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 38879535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 352 - 535
Target Start/End: Complemental strand, 35710447 - 35710266
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| ||||||||||||||||| || || ||||| ||||||  |||||    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctatt--ttaca 35710350  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcc 535  Q
    ||||||| | |||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||    
T  35710349 caagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctcc 35710266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 534
Target Start/End: Complemental strand, 41014455 - 41014273
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| |||||||||||  ||||| ||  | ||  ||| |||||| |||||||||||||||||||| || ||||| ||| || |||||    
T  41014455 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttac 41014357  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  41014356 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 41014273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 8169983 - 8170163
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||| || |||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  |||||    
T  8169983 aaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttaca 8170080  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||| ||| | |||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||||||| |||| |||||    
T  8170081 caaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggttagccctc 8170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 528
Target Start/End: Complemental strand, 43334340 - 43334162
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgttt- 448  Q
    |||||| ||||||||| |||||||||||  |||| |||| | || |||| |||||| ||||||||  |||||||||||| || ||||| ||| || |||     
T  43334340 aaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttt 43334242  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||| |||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  43334241 acacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 43334162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 28516432 - 28516594
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttgg-tgtattgtacacaaccttatcctattgtttac 450  Q
    |||||| ||||| ||| ||||||||||| ||||| |||| | |||||||  ||||| |||||||| | |||||||||| || || || ||| || |||||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttac 28516531  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||||| | ||||||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  28516532 acaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttaccg 28516594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 27328870 - 27328728
Alignment:
Q  372 taaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaag 469  Q
    ||||||||  ||||||||| | |  |||| |||||| |||||||  ||||||||||||| || ||||| ||| || ||||||||||||  | |||||| |    
T  27328870 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagg 27328771  T
Q  470 acttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27328770 acttgaacctgtgacctttcagtcacatgacaacaactttacc 27328728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 501
Target Start/End: Complemental strand, 32703559 - 32703411
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  ||||    
T  32703559 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttac 32703462  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||||| | |||||| |||||||||| ||||||||||||||||||||||    
T  32703461 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 362 - 513
Target Start/End: Original strand, 208936 - 209087
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggtt 460  Q
    |||||| ||||||||||||||||||| || | ||  ||| |||||| |||||||| ||||||||| |  || ||||| ||| || |||||||||||||||    
T  208936 cccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtt-tttacacaagaggtt 209034  T
Q  461 atttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
     || ||| ||||||||| |||||||||| ||||||||||||||||||||||||    
T  209035 gttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttaccg 209087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 414 - 534
Target Start/End: Complemental strand, 22187359 - 22187239
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||||| ||  |||||| | || ||||||||||||| | |||||| ||||| |||| ||||||||||||||| ||||||||||||||||      
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttacta 22187260  T
Q  514 gttgcgccaaagttatccctc 534  Q
    ||||||||||||||| |||||    
T  22187259 gttgcgccaaagttacccctc 22187239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 354 - 525
Target Start/End: Original strand, 12006329 - 12006502
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||| |||| |||| |||||||||||  ||||| ||| | ||||||| |||||| |||||||  ||||||||||||   | ||||| |||||| ||||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttaca 12006428  T
Q  452 caagaggttatttccaagacttgaacct-gtgacctttcagtcacatgacaacaactttaccggttgcgccaaag 525  Q
     |||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| | | ||||||||||||    
T  12006429 taagaggttgtttcca-gacttgaaccccgtgacctttcagtcacatgacaacaacttgagcagttgcgccaaag 12006502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 349 - 528
Target Start/End: Complemental strand, 30006463 - 30006285
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||||| ||||||||| |||||||||||  ||||||  | |  | |||| |||||| |||||||| ||||| |||||||| ||||| ||| ||||||    
T  30006463 aataaaagg-caacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgttt 30006365  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    | | |||||||| ||| |  |||||||| || ||||||||||||||||||||||||| |||| | |||||||||| ||||    
T  30006364 atataagaggttgttttccggacttgaatctatgacctttcagtcacatgacaacaaatttatcagttgcgccaatgtta 30006285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 373 - 534
Target Start/End: Complemental strand, 22600569 - 22600408
Alignment:
Q  373 aaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagact 472  Q
    |||||||  ||||||||| |||| |||| ||| || ||||||||||||||||||||||| ||||| ||| |  ||||||||| |  || |||||| ||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggact 22600470  T
Q  473 tgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||| || ||||| ||||||||||| |||||||||||| ||| || ||| |||| |||||    
T  22600469 tgaacccgtaaccttccagtcacatgataacaactttaccagttacgtcaaggttacccctc 22600408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 433 - 534
Target Start/End: Complemental strand, 23974835 - 23974735
Alignment:
Q  433 ccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccc 532  Q
    ||||| ||| || ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||    
T  23974835 ccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttacccc 23974737  T
Q  533 tc 534  Q
    ||    
T  23974736 tc 23974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 1565473 - 1565385
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||| ||||||||| |||||| |||||||||| | ||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  1565473 tttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 404 - 504
Target Start/End: Complemental strand, 1850723 - 1850624
Alignment:
Q  404 ggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaac 503  Q
    |||| ||||||||| |||||||||| || |||||| || || |||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  1850723 ggtcccaccatttgatgtattgtacgcacccttattctgtt-tttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaac 1850625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 37024647 - 37024735
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||    
T  37024647 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 37024735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 369 - 512
Target Start/End: Original strand, 19142959 - 19143101
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||||| |||  ||||||||| | || |||| |||||| |||||||||||||| ||||| || ||||| ||| || ||||||||||||||| ||||||     
T  19142959 cactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtt-tttacacaagaggttgtttccag 19143057  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||||||| | ||| |||||| ||||||||| ||||||    
T  19143058 gacttgaacctgtggcattttagtcacgtgacaacaattttacc 19143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 533
Target Start/End: Complemental strand, 2838857 - 2838733
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgaccttt-cagtcacatgacaacaact 507  Q
    |||||||||||||||||||| || ||||| ||| || ||||||||||| | | ||||  |||||||| |  ||||||||| |||||||||||||||||||    
T  2838857 caccatttggtgtattgtacgcagccttaccctgtt-tttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaact 2838759  T
Q  508 ttaccggttgcgccaaagttatccct 533  Q
    |||||||||||||||| |||| ||||    
T  2838758 ttaccggttgcgccaaggttacccct 2838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 39301197 - 39301089
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||| ||| ||| || ||||| ||| || | ||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||     
T  39301197 tttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc- 39301099  T
Q  514 gttgcgccaa 523  Q
    ||||||||||    
T  39301098 gttgcgccaa 39301089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 18426125 - 18426017
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||||||||||| | ||||||||||||||||||   ||||| |||||||||||| || ||| |||||||| |||||||||| |||||||||| | | |    
T  18426125 ggggtctcaccattcgatgtattgtacacaacctttctctattttttacacaagagattgttttcaagacttaaacctgtgacatttcagtcacgtaata 18426026  T
Q  502 acaacttta 510  Q
    |||||||||    
T  18426025 acaacttta 18426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 403 - 505
Target Start/End: Complemental strand, 1405272 - 1405170
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| |||||||||||||||||||| ||| ||||  ||||| |||| | |||||||| |||||| |||||||||| ||||||||  |||||||||||||    
T  1405272 gggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgaccttctagtcacatgacaa 1405173  T
Q  503 caa 505  Q
    |||    
T  1405172 caa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 462 - 523
Target Start/End: Original strand, 39079875 - 39079935
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  39079875 tttccaagacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaa 39079935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 513
Target Start/End: Original strand, 24903740 - 24903856
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||||||||| |||||| ||||||||||| |||| |||||| ||||||||| ||| | ||| || ||||||  ||  |||| ||||||||||     
T  24903740 gggaaggggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttttcaggacttgtgcccatgacttttcagtcacg 24903839  T
Q  497 tgacaacaactttaccg 513  Q
    ||||||||| |||||||    
T  24903840 tgacaacaaatttaccg 24903856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 524
Target Start/End: Original strand, 31694124 - 31694278
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||||| |||  ||||||||||| ||||||| || ||| || || | |||||||||||  || | ||| |||||| ||||||| || |  | ||| |||    
T  31694124 cactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctattttttacacgagtgacttttttcaa 31694223  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaa 524  Q
    ||||||||||| |||||| |||||||| |||||||||||||| | |||||||||||    
T  31694224 gacttgaacctatgacctatcagtcacgtgacaacaacttta-ctgttgcgccaaa 31694278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 360 - 458
Target Start/End: Original strand, 16880654 - 16880752
Alignment:
Q  360 aacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||||||| |||||||||||  ||||||||| | || |||| | |||| |||||||||||||||||||| || ||||| ||| || |||||||||||||    
T  16880654 aacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacacaagagg 16880752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 429
Target Start/End: Complemental strand, 16957451 - 16957373
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtaca 429  Q
    ||||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtaca 16957373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 414 - 496
Target Start/End: Original strand, 42924895 - 42924977
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    ||||||||||||||| |||||||| ||| || ||||||||||| ||| ||| || |||||||||  |||||||||||||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 7097776 - 7097864
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||||||||||  ||||||||| | |  |||| ||||||||||||||||||||||||||| |||||||| ||| || |||||||||||||    
T  7097776 cactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtt-tttacacaagagg 7097864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 508
Target Start/End: Original strand, 34074620 - 34074717
Alignment:
Q  411 ccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    ||||||||||||||| || ||||||||   | || ||||||||||||| | |||| | ||||||||| ||||||||||||||||  ||||||||||||    
T  34074620 ccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 478
Target Start/End: Original strand, 13801767 - 13801894
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||||| |||||||||||| ||||| ||  | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 13801866  T
Q  451 acaagaggttatttccaagacttgaacc 478  Q
    |||||||| |  ||||| ||||||||||    
T  13801867 acaagaggctgcttccaggacttgaacc 13801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 510
Target Start/End: Original strand, 24323746 - 24323862
Alignment:
Q  394 tctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtc 493  Q
    ||||||| |||||| ||| |||||| ||||| ||| ||| |||| ||| |  ||||||||||||||| ||||||  |||||||| | |||| ||||||||    
T  24323746 tctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaacatttgacatttcagtc 24323845  T
Q  494 acatgacaacaacttta 510  Q
    ||| || ||||||||||    
T  24323846 acacgataacaacttta 24323862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 510
Target Start/End: Original strand, 24360370 - 24360486
Alignment:
Q  394 tctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtc 493  Q
    ||||||| |||||| ||| |||||| ||||| ||| ||| |||| ||| |  ||||||||||||||| ||||||  |||||||| | |||| ||||||||    
T  24360370 tctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaacatttgacatttcagtc 24360469  T
Q  494 acatgacaacaacttta 510  Q
    ||| || ||||||||||    
T  24360470 acacgataacaacttta 24360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 477
Target Start/End: Complemental strand, 43574732 - 43574617
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtta 461  Q
    |||||| | |||||||||  ||||||||| | || |||| |||||| ||||||||||| |||||||| || ||||| ||| || | |||||||||| ||     
T  43574732 cccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattg 43574633  T
Q  462 tttccaagacttgaac 477  Q
    |||||| |||||||||    
T  43574632 tttccaggacttgaac 43574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 441
Target Start/End: Original strand, 12477136 - 12477209
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcacca-tttggtgtattgtacacaaccttatcct 441  Q
    ||||||||||||||||||||||  ||| |||| |||||| ||||| ||||||||||||||| || |||||||||    
T  12477136 cactaaagctcttgcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgcagccttatcct 12477209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 503
Target Start/End: Original strand, 22907914 - 22908014
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||| |||||||||||||||||||  ||||||||  || || ||||||||||||| | ||||   ||||||||||  ||||||||||||||||| |||    
T  22907914 ggggtcccaccatttggtgtattgtatgcaaccttactctgtt-tttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataaca 22908012  T
Q  502 ac 503  Q
    ||    
T  22908013 ac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 22861782 - 22861841
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||| | ||||||||||||||||||||||||||||||| | |||| ||||| ||||    
T  22861782 gacttgaatccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggtta 22861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 510
Target Start/End: Original strand, 24313617 - 24313732
Alignment:
Q  397 gggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagagg-ttatttccaagacttgaacctgtgacctttcagtca 494  Q
    |||| |||||| |||||||| ||||||||| || |||||||||| | || | |||| ||| || || ||||||||||||||||   ||||||||||||||    
T  24313617 gggaaggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaagggggttgtttccaagacttgaacacatgacctttcagtca 24313716  T
Q  495 catgacaacaacttta 510  Q
      ||||||||||||||    
T  24313717 tgtgacaacaacttta 24313732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 510
Target Start/End: Original strand, 24355954 - 24356069
Alignment:
Q  397 gggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagagg-ttatttccaagacttgaacctgtgacctttcagtca 494  Q
    |||| |||||| |||||||| ||||||||| || |||||||||| | || | |||| ||| || || ||||||||||||||||   ||||||||||||||    
T  24355954 gggaaggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaagggggttgtttccaagacttgaacacatgacctttcagtca 24356053  T
Q  495 catgacaacaacttta 510  Q
      ||||||||||||||    
T  24356054 tgtgacaacaacttta 24356069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 523
Target Start/End: Original strand, 10634243 - 10634315
Alignment:
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||| |||||| |||| | ||||||||||  ||||||||||||||| |||||||||||| ||| ||||||||||    
T  10634243 cacacgaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttgcgccaa 10634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 31299669 - 31299592
Alignment:
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||| | |||| | |||||||||  ||||||| | ||||||||||||||||||||||| ||||| |||| ||||    
T  31299669 acaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccagttgcaccaaggtta 31299592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 524
Target Start/End: Complemental strand, 17419940 - 17419878
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaa 524  Q
    |||||| |||||||||  || ||||||||||||||| ||||||| |||||| ||| |||||||    
T  17419940 tttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagttacgccaaa 17419878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 534
Target Start/End: Complemental strand, 19438757 - 19438703
Alignment:
Q  480 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||| |||| ||||| ||||||||||||||||| |||||||||| |||| |||||    
T  19438757 gtgatcttttagtcatatgacaacaactttaccagttgcgccaaggttacccctc 19438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 41426042 - 41425952
Alignment:
Q  394 tctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgac 484  Q
    ||||||| |||||| ||||| |||||||||||||  || ||||| ||| || ||||||||| | ||| ||||||  ||||||||| |||||    
T  41426042 tctgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgac 41425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 467
Target Start/End: Complemental strand, 22226130 - 22226070
Alignment:
Q  406 tctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    ||||| ||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||    
T  22226130 tctcatcattttgtgtattatacacaatcttatcctatt-tttacacaagaaattatttcca 22226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 510
Target Start/End: Original strand, 28208235 - 28208264
Alignment:
Q  481 tgacctttcagtcacatgacaacaacttta 510  Q
    ||||||||||||||||||||||||||||||    
T  28208235 tgacctttcagtcacatgacaacaacttta 28208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 512
Target Start/End: Complemental strand, 36200225 - 36200168
Alignment:
Q  455 gaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||| |||||||||||| ||||| |||| ||||| ||||  |||||||||||||||    
T  36200225 gaggttgtttccaagacttaaacctatgacttttcaatcacgagacaacaactttacc 36200168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 467
Target Start/End: Complemental strand, 20135740 - 20135625
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||| ||||||||| |||| |||||| |||||| ||  | || |||| |||||| |||||||  ||||||||||||| || ||||| | | || ||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  452 caagaggttatttcca 467  Q
    ||||||| | ||||||    
T  20135640 caagaggctgtttcca 20135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 493
Target Start/End: Complemental strand, 22025598 - 22025538
Alignment:
Q  433 ccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtc 493  Q
    ||||| ||| || ||||||||||||| | |||||| ||||||||||  |||||||||||||    
T  22025598 ccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 22025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 31362454 - 31362494
Alignment:
Q  472 ttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||| |||||||| || |||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacc 31362494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 34154814 - 34154898
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaacctta 437  Q
    ||||| ||||||||| ||||| ||||   ||||| ||| | || |||| |||||| |||||||||||||||||||| || |||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctta 34154898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 3e-46; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 40272811 - 40272993
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || ||||||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttaca 40272910  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| |||||| ||||||||||  ||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  40272911 caagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 40272993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 353 - 534
Target Start/End: Complemental strand, 39203671 - 39203492
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| |||||||||||  ||||| ||||| || |||| |||||| |||||||||||||||||||| |||||||| ||| ||  ||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtt--ttacac 39203574  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||  |||| ||||| |||| |||||    
T  39203573 aagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttacccctc 39203492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 354 - 534
Target Start/End: Complemental strand, 22609921 - 22609743
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacaca 453  Q
    |||| ||||||||| |||| ||||||  ||||||||||| || |||| |||||| |||||||||||||||||||| || ||||| ||| || ||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacaca 22609823  T
Q  454 agaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||| | ||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  22609822 agaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggttacccctc 22609743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 351 - 534
Target Start/End: Original strand, 12914033 - 12914216
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| || | ||||||  ||||| ||| | ||||||| ||||||||||||||||||||||||||| |  ||||| ||| || |||||    
T  12914033 taaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttac 12914132  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||| ||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||| |||| |||||    
T  12914133 acaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttacccctc 12914216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 534
Target Start/End: Original strand, 13730596 - 13730785
Alignment:
Q  347 ctaataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctatt 444  Q
    |||| |||||| ||||||||| |||||||||||  ||||| ||  | || |||| |||||| |||||||  |||||||||||||||| ||||| ||| ||    
T  13730596 ctaaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtt 13730695  T
Q  445 gtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
     ||||||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  13730696 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 13730785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 352 - 521
Target Start/End: Complemental strand, 26869864 - 26869696
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||| |||||||  ||||||||| | || || | |||||| |||||||||||||||||||| || ||||| ||| || ||||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttaca 26869766  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgcc 521  Q
    | ||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26869765 ccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 372 - 534
Target Start/End: Original strand, 8247706 - 8247870
Alignment:
Q  372 taaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaag 469  Q
    ||||||||  ||||||||| | || |||| || ||| |||||||  ||||||||||||| |||||||| ||| || ||||||||||||| | |||||| |    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagg 8247805  T
Q  470 acttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  8247806 acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8247870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 364 - 536
Target Start/End: Original strand, 6411833 - 6412004
Alignment:
Q  364 cggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatt 463  Q
    |||| |||||||||||  ||||||||||| ||||||| |||||| || ||||||||||||||||| || ||||| ||| || ||||||||||||| | ||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtt 6411931  T
Q  464 tccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcca 536  Q
    | |||||||||||||  |||||| ||||| ||||||||||||||||||| |||||| ||| |||| |||||||    
T  6411932 tacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcgtcaaggttacccctcca 6412004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 350 - 534
Target Start/End: Original strand, 13628787 - 13628974
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtt 447  Q
    |||||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| ||  |    
T  13628787 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttct 13628886  T
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaac-tttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||||||||||||||| |||||| |||| ||||| |||| |||||    
T  13628887 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttacccctc 13628974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 46421033 - 46421218
Alignment:
Q  352 aaaaggacaacccggtacact-aaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    |||||| ||| ||||| |||| |||||||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||    
T  46421033 aaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 46421132  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||| | |||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||    
T  46421133 acacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttacccctc 46421218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 1217246 - 1217066
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| | |||||||||||||||||| || ||||| ||| ||  |||||    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgtt--ttaca 1217149  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||    
T  1217148 caagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttacccctc 1217066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 369 - 523
Target Start/End: Complemental strand, 26573268 - 26573115
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    |||||||||||  ||||||||| | || |||| |||||| ||||| |||||||||||||| || ||||| ||| || |||||||| |||| | ||||||     
T  26573268 cactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccag 26573169  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  26573168 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 26573115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 351 - 533
Target Start/End: Original strand, 29366718 - 29366902
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||| |||||| || |||||||||||   |||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||    
T  29366718 taaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 29366817  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
    | |||||||| | |||||| |||||||||| ||||||||| ||||||||||||||||||||||| ||| |||||| |||| ||||    
T  29366818 atacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttacccct 29366902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 403 - 535
Target Start/End: Original strand, 4495714 - 4495846
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| |||||||||||||||||||| || ||||| ||| || ||||||||| ||| ||||| || |||||||||| |||||||| ||||||||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaa 4495813  T
Q  503 caactttaccggttgcgccaaagttatccctcc 535  Q
    |||||||||| ||||||| || |||| ||||||    
T  4495814 caactttaccagttgcgcgaaggttacccctcc 4495846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 354 - 528
Target Start/End: Original strand, 22122918 - 22123090
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacaca 453  Q
    |||| ||||||||| ||||| |||||| ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  |||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttacaca 22123015  T
Q  454 agaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||  | |||||| |||||||||| | |||||||||||||||||||||||| |||||| || ||||||| ||||    
T  22123016 agagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgccaaggtta 22123090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 5173718 - 5173902
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  ||||||||||| || |||| |||| | ||||||||  ||||||||| |  ||||||||   | || ||||    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtt-ttta 5173816  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaac-tttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||  |||||||||| |||| |||||    
T  5173817 cacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttacccctc 5173902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 533
Target Start/End: Original strand, 25517168 - 25517353
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-a 449  Q
    ||||||| ||||||||| |||||||||||  ||||||||| |||| |||| |||||| |||||||| ||||||||||| || || |||| | || ||| |    
T  25517168 taaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgttttttta 25517267  T
Q  450 cacaagaggttatttccaagact--tgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
    ||||||||| | |||||| | |   | | ||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  25517268 cacaagaggatgtttccaggtcccatcatcctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccct 25517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 369 - 511
Target Start/End: Original strand, 34420659 - 34420802
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||||||||   |||||||||| || |||| |||||| |||||||| ||||||| |||| || ||||| ||| || ||||||||||||| | ||||||    
T  34420659 cactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttcca 34420758  T
Q  468 agacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
     |||||||||| |||||||||||||||| |||||||||||||||    
T  34420759 ggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 52926218 - 52926391
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| | |||||||||  ||||||||| | || |||| || ||| |||||||||||||||||||| || |||||          ||||    
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac---------taca 52926308  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  52926309 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 52926391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 370 - 495
Target Start/End: Original strand, 54374362 - 54374488
Alignment:
Q  370 actaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||||||||  ||||| ||| | || |||| |||||| |||||||| |||| ||||||| || ||||| |||||| ||||||||||||||| |||||||    
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaa 54374461  T
Q  469 gacttgaacctgtgacctttcagtcac 495  Q
    |||||||||||||||||||||||||||    
T  54374462 gacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 411 - 534
Target Start/End: Original strand, 7696945 - 7697066
Alignment:
Q  411 ccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||||||||||||||| || ||||| ||| ||  |||||||||||  | |||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctgtt--ttacacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaacttta 7697042  T
Q  511 ccggttgcgccaaagttatccctc 534  Q
    || |||||||||| |||| |||||    
T  7697043 ccagttgcgccaaggttacccctc 7697066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 10870044 - 10870132
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  10870044 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 350 - 534
Target Start/End: Complemental strand, 16735600 - 16735417
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| |||||| || |||| |||||   |||||||||   || |||| |||||| |||||||||||||||||||| || ||||| ||| || |||     
T  16735600 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttc 16735502  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
     |||||||| | |||| | |||||||||| ||||| || |||||||||||||||||||||||| |||||||||| |||| |||||    
T  16735501 tacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 16735417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 53996564 - 53996726
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttac 450  Q
    |||||| || |||||| |||||||||||   ||||||||   || |||| |||||| |||||||| |||||||||||  || ||||| ||| || |||||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttac 53996663  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||||||| |||||| |||||||||  ||||||||||||||| |||||||||| |||||||    
T  53996664 acaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttaccg 53996726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 363 - 523
Target Start/End: Original strand, 45948848 - 45949010
Alignment:
Q  363 ccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttat 462  Q
    ||||| |||||||||||  ||||||||| | || | || |||||| ||||| |||||||||||||  || ||||| |||||| ||||||||||||||| |    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  463 ttccaagacttgaacctgtgacct---ttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||| || ||||||| |||||||   ||||||||||||| |||||||| ||| ||||||||||    
T  45948948 ttccaggaattgaacccgtgaccttccttcagtcacatgaaaacaacttcacc-gttgcgccaa 45949010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 413 - 525
Target Start/End: Complemental strand, 29106646 - 29106535
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||| ||| ||||||||| ||| |||| |||| || ||||||||||||  ||||||    
T  29106646 atttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtgatctttgagccacatgacaacatttttacc 29106547  T
Q  513 ggttgcgccaaag 525  Q
     ||||||||||||    
T  29106546 -gttgcgccaaag 29106535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 513
Target Start/End: Original strand, 30928191 - 30928307
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| | ||| |||||||||| |||||||||||| | | || ||||||||||||| | |||||| |||||||||| |||||||||||||||||    
T  30928191 gggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcaca 30928290  T
Q  497 tgacaacaactttaccg 513  Q
    |||||| ||||| ||||    
T  30928291 tgacaagaacttgaccg 30928307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 352 - 502
Target Start/End: Complemental strand, 516570 - 516417
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt---ggtgtattgtacacaaccttatcctattgttt 448  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| | ||||||   ||| |||||| | || ||||| ||| || |||    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgtttttt 516471  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    |||||||||| | |||||| |||||||||| |||||||||||||||||||||||    
T  516470 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 534
Target Start/End: Complemental strand, 9607298 - 9607179
Alignment:
Q  415 ttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccgg 514  Q
    |||||||||| ||| || ||||| ||| || ||||| ||||||| | |||||| ||||||||||  |||||||||||||||||||||||||||||||  |    
T  9607298 ttggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaag 9607199  T
Q  515 ttgcgccaaagttatccctc 534  Q
    ||||||||| |||| |||||    
T  9607198 ttgcgccaaggttacccctc 9607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 362 - 513
Target Start/End: Complemental strand, 19731150 - 19730999
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtta 461  Q
    |||||| ||||||||||| ||||||| ||   |||||||  ||||| ||||| | |||||||||||| |||||||| | | || ||||||||||||| ||    
T  19731150 cccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggcta 19731051  T
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||| |||||| | | ||||||||||| |||| ||||||||| |||||||    
T  19731050 tttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttaccg 19730999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 369 - 499
Target Start/End: Complemental strand, 33926224 - 33926094
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatt-tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||||||||| ||||| ||| | ||  ||| |||||| ||||||| |||||||||||||||| ||||| ||| || ||||||||||||| ||||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtt-tttacacaagaggctatttcca 33926126  T
Q  468 agacttgaacctgtgacctttcagtcacatga 499  Q
     ||||||||||  |||||||||||||||||||    
T  33926125 ggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 362 - 515
Target Start/End: Complemental strand, 19751726 - 19751573
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtta 461  Q
    |||||| ||||||||||| ||||||| |||  |||||||  ||||| ||||| | |||||||||||| |||||||| | |  | ||||||||||||| ||    
T  19751726 cccggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggcta 19751627  T
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggt 515  Q
    |||||| |||||| | | ||||||||||| |||| |||||| || |||||||||    
T  19751626 tttccaggacttgcatccgtgacctttcaatcacgtgacaaaaaatttaccggt 19751573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 45620884 - 45620998
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaact 507  Q
    ||||| |||||||||||||| || ||||| ||| || ||| |||||||||| | ||||||  ||||||||| |||||||||||||||| |||||||||||    
T  45620884 caccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaact 45620983  T
Q  508 ttaccggttgcgccaa 523  Q
    ||||| ||||||||||    
T  45620984 ttacc-gttgcgccaa 45620998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 359 - 507
Target Start/End: Complemental strand, 7943141 - 7942993
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||||| || |||||||||||  ||||||||| | ||||| | ||| || ||||||||| |||||||||| ||  |||| ||| || |||| |||||| |    
T  7943141 caacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatg 7943042  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaact 507  Q
     | |||||| |||||||| | |||||||| |||||||||||||||||||    
T  7943041 ctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 354 - 512
Target Start/End: Complemental strand, 33235687 - 33235528
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-acac 452  Q
    |||| ||||| ||| ||||||||||   ||||||| ||| |||| || |||||| |||||||| ||||||||||||||  |||| ||| || ||| ||||    
T  33235687 aagggcaacctggtgcactaaagcttccgcatacgtaaggtctgcga-ggggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacac 33235589  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttca-gtcacatgacaacaactttacc 512  Q
    |||||| | ||| || || |||||| |||||||||||| ||||||||||||||||||||||    
T  33235588 aagaggctctttacacgatttgaacttgtgacctttcatgtcacatgacaacaactttacc 33235528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 45139517 - 45139624
Alignment:
Q  394 tctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcag 491  Q
    ||||||| |||||| ||||||||  |||||||||||  || ||||| ||| |  ||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  45139517 tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcag 45139616  T
Q  492 tcacatga 499  Q
    ||||||||    
T  45139617 tcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 403 - 499
Target Start/End: Original strand, 54032609 - 54032705
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatga 499  Q
    ||||| ||||||| |||||||||||  || ||||| ||| || ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatga 54032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 12525471 - 12525386
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||| | |||||| |||| ||||||||||||||||||||| |||   ||||||||||| |||||||||| |||| |||||    
T  12525471 tttacacaagaggctgtttccaggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgccaaggttacccctc 12525386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 39212054 - 39211992
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||||| || |||||||    
T  39212054 tttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataacgacaactt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 478
Target Start/End: Complemental strand, 14987109 - 14986989
Alignment:
Q  360 aacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagag 457  Q
    |||||||| |||||||||||  ||||| ||||| || ||||  ||||| |||||||  ||||||||||||| || ||||| ||| || ||||||||||||    
T  14987109 aacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 14987010  T
Q  458 gttatttccaagacttgaacc 478  Q
    | | |||||| ||||||||||    
T  14987009 gctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 25944597 - 25944468
Alignment:
Q  383 catacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgt 481  Q
    |||||||| | || |||| |||||| |||||||| |||||||||||| || ||||  ||  || ||||||| |||||   |||||| ||||||||||  |    
T  25944597 catacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccat 25944498  T
Q  482 gacctttcagtcacatgacaacaactttac 511  Q
    |||||||||||||| |||||||||||||||    
T  25944497 gacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 437
Target Start/End: Complemental strand, 54484849 - 54484764
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaacctta 437  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || |||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctta 54484764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 512
Target Start/End: Complemental strand, 26782464 - 26782364
Alignment:
Q  412 catttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    ||||||||||||| || ||| | ||| |||||| |||||||||||| || |||| | |||||||| | ||||||||||| || |||||||| ||||||||    
T  26782464 catttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttac 26782365  T
Q  512 c 512  Q
    |    
T  26782364 c 26782364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 449 - 513
Target Start/End: Complemental strand, 53062099 - 53062035
Alignment:
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||| |||| | |||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  53062099 acacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttaccg 53062035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 478
Target Start/End: Complemental strand, 31593004 - 31592881
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| ||||| |||||  ||||| ||| | || |||| || ||| |||||||||||||||||||| || ||||| ||| |  |||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgt--tttacac 31592907  T
Q  453 aagaggttatttccaagacttgaacc 478  Q
    |||||| | |||||| ||||||||||    
T  31592906 aagaggctgtttccaggacttgaacc 31592881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 524
Target Start/End: Original strand, 829441 - 829612
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcacca-tttggtgtattgtacacaaccttatcctattgtttac 450  Q
    |||||||||  ||||| ||||||||||| |||||||||| | |  |||| |||||| ||||| ||||||||||||||| |||| |||   | || ||||     
T  829441 aaaaggacagaccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttag 829540  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaa 524  Q
    |||||||||| |||| |  ||||||| ||  |  |||||| |||| |||||||||||||||| |||||||||||    
T  829541 acaagaggttgtttctagaacttgaa-ctcgggtctttcaatcacgtgacaacaactttacc-gttgcgccaaa 829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 35417980 - 35417904
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||||||| | |||||| || ||||||  ||||||| |||||||||||| |||||||||||| ||||||||||    
T  35417980 tttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgccaa 35417904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 458
Target Start/End: Original strand, 45786214 - 45786321
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||||| |||||||||||  |||| |||| | || |||| |||||| ||||||||  |||||||||||| || ||||| ||| || |||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 45786313  T
Q  451 acaagagg 458  Q
    ||||||||    
T  45786314 acaagagg 45786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 513
Target Start/End: Original strand, 44403649 - 44403716
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||| || ||| |||||| ||||||||||    
T  44403649 tttacacaagaggctattcccaggactttaacctgtgaccttttagccacgtgacaataactttaccg 44403716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 478
Target Start/End: Original strand, 10795423 - 10795550
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||| ||| |||| ||||||  ||||||||| | ||  ||| |||||| ||||||||  |||||||||||| || ||||| ||| |  |||||    
T  10795423 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 10795522  T
Q  451 acaagaggttatttccaagacttgaacc 478  Q
    |||||||| | |||||| ||||||||||    
T  10795523 acaagaggctgtttccaggacttgaacc 10795550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 52952592 - 52952528
Alignment:
Q  404 ggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    |||| ||| |||||||||||||||||||  |||||| |||| |||||| |||||||| |||||||    
T  52952592 ggtcccactatttggtgtattgtacacagtcttatcatattttttacataagaggttgtttccaa 52952528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 458
Target Start/End: Complemental strand, 15797378 - 15797274
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||   |||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| |  ||||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--tttaca 15797281  T
Q  452 caagagg 458  Q
    |||||||    
T  15797280 caagagg 15797274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 419
Target Start/End: Original strand, 24851300 - 24851367
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggt 419  Q
    |||||| ||||||||| |||||||||||  ||||| ||| |||| |||| |||||| |||||||||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttggt 24851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 468
Target Start/End: Original strand, 49013472 - 49013590
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  || || ||  | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || ||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 49013571  T
Q  450 cacaagaggttatttccaa 468  Q
    ||||||||| | |||||||    
T  49013572 cacaagaggctgtttccaa 49013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 458
Target Start/End: Complemental strand, 9276365 - 9276316
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||||||||||||||||||| || ||||| ||| || |||||||||||||    
T  9276365 caccatttggtgtattgtacgcagccttaccctgttttttacacaagagg 9276316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 11461734 - 11461807
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcg 519  Q
    ||||||||| ||  ||||||||  |||| ||||||| ||||| | |||| ||||||||||||||||| ||||||    
T  11461734 tttacacaaaagactatttccagaacttaaacctgtaaccttcctgtcatatgacaacaactttaccagttgcg 11461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 34771363 - 34771448
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaacctta 437  Q
    |||||| || |||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || |||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctta 34771448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 458
Target Start/End: Complemental strand, 47624154 - 47624094
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||| |||||| |||||||||||||||||||| || ||||| ||| || |||||||||||||    
T  47624154 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagagg 47624094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 462 - 534
Target Start/End: Complemental strand, 4537079 - 4537007
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| |||| |||| ||||||||||| ||||||||| ||||| |||||| ||  ||||| |||| |||||    
T  4537079 tttccaaaacttaaacccgtgacctttcaatcacatgaccacaacattaccgattatgccaaggttacccctc 4537007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 488 - 528
Target Start/End: Complemental strand, 21875042 - 21875002
Alignment:
Q  488 tcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||||||||||||||||||||| |||||| ||| ||||    
T  21875042 tcagtcacatgacaacaactttaccagttgcgtcaaggtta 21875002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 469 - 513
Target Start/End: Complemental strand, 28904984 - 28904940
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||| ||| |||||| ||| ||||||||||||||||||||||||    
T  28904984 gacttaaacatgtgactttttagtcacatgacaacaactttaccg 28904940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 31904872 - 31904932
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacgggg-tctcaccatttggtgtattgtac 428  Q
    |||||||||||  ||| ||| ||||||||||| |||| || ||||||||||||||||||||    
T  31904872 cactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtac 31904932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 46247952 - 46248134
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||||||||||||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| ||  |||| ||| || ||||||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttaca 46248051  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||| |||| |||||    
T  46248052 caagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttacccctc 46248134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 359 - 536
Target Start/End: Complemental strand, 46991956 - 46991779
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||||||| |||||||||||   |||||||| | || |||| |||||| ||||||| ||||||||||||||| ||||| ||| || |||||||||||||    
T  46991956 caacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaagagg 46991857  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcca 536  Q
    || |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||| |||| |||| |||||||    
T  46991856 ttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctcca 46991779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 351 - 534
Target Start/End: Complemental strand, 14617198 - 14617015
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    |||||||  |||||||| |||||||||||  ||||| ||| | || |||| ||| || |||||||||||||||||||| |||||||| | | || |||||    
T  14617198 taaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttac 14617099  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  14617098 acaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccctc 14617015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 18944805 - 18944620
Alignment:
Q  352 aaaaggacaacccggtacactaaa-gctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    |||||| ||||||||| ||||||| ||||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||    
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttttt 18944706  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||| | |||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  18944705 acacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 18944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 369 - 519
Target Start/End: Original strand, 23768336 - 23768486
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    |||||||||||  ||||||||| | ||||||| || ||| |||||||||||||||||||| || ||||| ||| || ||||||||||||| | ||||||     
T  23768336 cactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccat 23768435  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcg 519  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  23768436 gacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcg 23768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 350 - 534
Target Start/End: Original strand, 34725095 - 34725277
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||| ||||||||||| || ||||| ||| ||  |||    
T  34725095 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgtt--tta 34725192  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  34725193 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 34725277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 347 - 534
Target Start/End: Original strand, 32632551 - 32632737
Alignment:
Q  347 ctaataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgt 446  Q
    |||||||||||  |||| ||| |||| ||||||  ||||| ||| | | ||||| |||||| |||||||||||||||||||| || ||||| ||| || |    
T  32632551 ctaataaaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-t 32632649  T
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||    
T  32632650 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctc 32632737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 369 - 534
Target Start/End: Complemental strand, 47214651 - 47214488
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||| |||||  ||||| ||| | ||||||| |||||| |||||||||||||||||||| |||||||| ||| ||  ||| |||||||  | ||||||     
T  47214651 cactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtt--ttaaacaagagactgtttccag 47214554  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  47214553 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 47214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 512
Target Start/End: Complemental strand, 6925252 - 6925099
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||| |||| |||||||||||  ||||||||| |  | |||| |||||| ||||||| |||||||||| | || ||||| |||||| |||||||||||||    
T  6925252 caactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagagg 6925153  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
     |||||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  6925152 ctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 6925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 349 - 534
Target Start/End: Complemental strand, 10668389 - 10668197
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgt 446  Q
    ||||||||| ||||||||| |||||||||||  ||||||||| |  | |||| |||||| |||||||  ||||||||||||| |||||||| | | || |    
T  10668389 aataaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtttt 10668290  T
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtc-----acatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||||     ||||||||||||||||||| |||||||||| |||| |||||    
T  10668289 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggttacccctc 10668197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 349 - 534
Target Start/End: Original strand, 20004086 - 20004273
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgt 446  Q
    ||||||||| ||||||||| |||||||||||  ||||| ||  | ||||||| |||||| |||||||  ||||||||||||| || ||||| | | || |    
T  20004086 aataaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttt 20004185  T
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||| ||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||| |||| |||| |||||    
T  20004186 ttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 20004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 534
Target Start/End: Complemental strand, 27474441 - 27474258
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| ||| ||||| |||||||||||  ||||||||| | || |||| |||||| |||||||  ||||||||||| || | ||  ||| || ||||    
T  27474441 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtt-ttta 27474343  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |||| |||||    
T  27474342 cacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttacccctc 27474258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 18724605 - 18724714
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||||||||| ||||| ||| || ||||||||||||| | |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  18724605 atttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T
Q  513 ggttgcgccaa 523  Q
     ||||||||||    
T  18724705 -gttgcgccaa 18724714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 349 - 528
Target Start/End: Original strand, 30395722 - 30395903
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgt 446  Q
    ||||||||| |||| |||| |||||||||||  ||||| ||  | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |    
T  30395722 aataaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 30395821  T
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||||||| | |||||| |||||||||| ||||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  30395822 ttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 534
Target Start/End: Original strand, 22930118 - 22930248
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||| |||||||||||||||||| |||||||||| ||| || ||||||||| ||| | |||||| ||||||||||  |||||||||||||||||||||    
T  22930118 ggggtcccaccatttggtgtattgt-cacaaccttaccctgtt-tttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgaca 22930215  T
Q  502 acaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| |||||||||| |||| |||||    
T  22930216 acaactttaccagttgcgccaaggttacccctc 22930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 45812543 - 45812716
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||||||| ||||| |||||  ||||| ||| | | ||||| |||||| |||||||||||||||||||  || ||||| ||| ||  |||||||||||     
T  45812543 caacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctctt--ttacacaagaga 45812640  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
     | ||| || |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| |||||    
T  45812641 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccctc 45812716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 362 - 513
Target Start/End: Original strand, 35117774 - 35117928
Alignment:
Q  362 cccggtacactaaagctcttgcat-acgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||||| ||||||||||| ||||| ||||| | || |||| |||||| || |||||  ||||||||||||||| ||||| ||| |  |||||||||||||    
T  35117774 cccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagagg 35117873  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
     |||||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  35117874 ctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 35117928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 8197202 - 8197020
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||||||||||||||||||||   |||||||| | || | || ||||||  ||||||||||||| |||||  | ||||| | | || ||||||    
T  8197202 aaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttaca 8197103  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||  ||| ||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||| |||| |||||    
T  8197102 caagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttacccctc 8197020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 25468292 - 25468421
Alignment:
Q  382 gcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgt 481  Q
    ||||||||| | ||||||| | ||||  ||||||||||||||||||| |||||||| |||  | ||||||||||||||| |||||| ||||||||||  |    
T  25468292 gcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccat 25468391  T
Q  482 gacctttcagtcacatgacaacaactttac 511  Q
    ||||||||| ||||||||||||||||||||    
T  25468392 gacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 362 - 523
Target Start/End: Complemental strand, 35019378 - 35019219
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtta 461  Q
    |||||| |||||||||||| ||||||||| | ||||||| |||||| ||||| |||||||||||||  || |||||| ||  | |||| ||||||||||     
T  35019378 cccggtgcactaaagctctcgcatacgcagggtctggga-ggggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttg 35019280  T
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||| || |||||||| |||||||||||||||||  |||||||||||||||| ||||||||||    
T  35019279 tttacaggacttgaatctgtgacctttcagtcatgtgacaacaactttacc-gttgcgccaa 35019219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 41319850 - 41319987
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| || ||||||||||||||||| || ||||| ||| || ||||||||||||  | |||||| ||||| ||||||||||||||||||||||    
T  41319850 gggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcaca 41319949  T
Q  497 tgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||||||| |||| | ||| |||| |||||    
T  41319950 tgacaacaactttaccagttgtgtcaaggttacccctc 41319987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 410 - 533
Target Start/End: Complemental strand, 24564445 - 24564322
Alignment:
Q  410 accatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttt 509  Q
    ||||||||||| ||||||| || ||||| ||| || ||||||||||||||| ||||||||||||||| ||| ||||||||| ||||| |||| |||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttcaatcacaagacatcaacttt 24564346  T
Q  510 accggttgcgccaaagttatccct 533  Q
    || ||||||||||| |||| ||||    
T  24564345 actggttgcgccaaggttacccct 24564322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 352 - 512
Target Start/End: Complemental strand, 27201808 - 27201646
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||  | |||||||||||  ||||||||||| || |||| |||||| ||||||||  |||||||||||| || ||||| ||| ||  | |    
T  27201808 aaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctga 27201709  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||| | |||||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  27201708 cacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 27201646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 401 - 523
Target Start/End: Complemental strand, 33223094 - 33222972
Alignment:
Q  401 cggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatga 499  Q
    ||||||| |||||||| |||||||||||| |||||||  ||| || ||||||||||||| | |||||| ||||| || | ||||||||||||||||||||    
T  33223094 cggggtcccaccattttggtgtattgtacgcaacctttccctgtt-tttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatga 33222996  T
Q  500 caacaactttaccggttgcgccaa 523  Q
    ||||||||||||||||||||||||    
T  33222995 caacaactttaccggttgcgccaa 33222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 38478281 - 38478461
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || | || |||||  |||||||||||||||||||| || ||||| ||| ||  |||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgtt--ttaca 38478378  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||| | |||||||||| |||||||||||||||||||||||||| |||||  |||||||||| |||| |||||    
T  38478379 caagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttacccctc 38478461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 528
Target Start/End: Original strand, 18741964 - 18742136
Alignment:
Q  360 aacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgttt-acacaaga 456  Q
    |||||||| |||||||||||| ||||||||| | ||||||| |||||| ||||||||  |||||||||||| || ||||| ||| || ||| | |||| |    
T  18741964 aacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttatacaaaa 18742063  T
Q  457 ggttatttcc-aagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |  | ||||| |||| |||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  18742064 gactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 18742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 350 - 523
Target Start/End: Original strand, 19932750 - 19932922
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtt 447  Q
    |||| ||| ||||| ||| |||||| | ||||||||||||| | || |||| |||||| ||||||||  |||||||||||| || ||||| ||| || ||    
T  19932750 ataatagggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 19932849  T
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||| ||||| | |||||  ||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  19932850 tacacaa-aggttgtatccaa--cttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaa 19932922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 528
Target Start/End: Complemental strand, 45402248 - 45402078
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacaca-acctt--atcctattgtttacacaag 455  Q
    ||||||||| |||||||||||  ||||||||| | ||||||| |||||| |||||||||||||||||||| || | |||  | ||| || ||||||||||    
T  45402248 caacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctgtt-tttacacaag 45402150  T
Q  456 aggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||| | |||||| |||||||||| || ||||| || ||||||||||||||||||||| |||||||||| ||||    
T  45402149 aggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgccaaggtta 45402078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 349 - 512
Target Start/End: Original strand, 6983807 - 6983968
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||||| || |||||| ||| ||||||| ||| |||||| | || || | |||||| |||||||||||||||||||| ||  |||| ||| || |||    
T  6983807 aataaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgtttttt 6983906  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    | ||  |||| | |||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  6983907 atac--gaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacc 6983968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 381 - 512
Target Start/End: Complemental strand, 20036351 - 20036219
Alignment:
Q  381 tgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctat-tgtttacacaagaggttatttccaagacttgaacct 479  Q
    |||||||||| | || |||| |||||  ||||||||||||||||| || ||| |||| ||| | | |||||||||||| || |||||| ||||||||||     
T  20036351 tgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaaccc 20036252  T
Q  480 gtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||||||||||||||||||||||||||    
T  20036251 gtgacctttcagtcacatgacaacaactttacc 20036219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 351 - 528
Target Start/End: Complemental strand, 9939624 - 9939443
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctg-ggacggggtctcacca--tttggtgtattgtacacaaccttatcctattgtt 447  Q
    |||||||  |||||||| |||||||||||  ||||||||| | || | | | |||||| |||||  |||||||||||| || |||||||| | | ||  |    
T  9939624 taaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttct 9939525  T
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaac-tttaccggttgcgccaaagtta 528  Q
    || |||||||||| |||||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9939524 taaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 351 - 512
Target Start/End: Complemental strand, 19414597 - 19414438
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| ||||| |||||  ||||| ||| | |  |||| |||||| |||||||||||||||||||| || ||||| ||| ||  ||||    
T  19414597 taaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgtt--ttac 19414500  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    | |||||| | |||| | |||||||||| ||||||||||||||| |||||||||||||||||    
T  19414499 ataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 19414438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 22327196 - 22327088
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||| || ||||||| ||||| ||| || ||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||| ||     
T  22327196 tttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttgcc- 22327098  T
Q  514 gttgcgccaa 523  Q
    ||||||||||    
T  22327097 gttgcgccaa 22327088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 495
Target Start/End: Complemental strand, 35005285 - 35005139
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||| ||||||||| ||||||||| |  ||||||||| | || |||| |||||| ||||||||  |||||||||||  || ||||| ||| || |||    
T  35005285 taaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttt 35005186  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcac 495  Q
    |||||||||| | ||| ||||||||||||| ||||||||||||||||    
T  35005185 acacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 402 - 523
Target Start/End: Original strand, 2435835 - 2435956
Alignment:
Q  402 ggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgac 500  Q
    |||||| |||||||| |||||||||||| ||  |||| |||||| || ||||| |||| | |||||| |||||||||| |||||||||||||||| ||||    
T  2435835 ggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgac 2435934  T
Q  501 aacaactttaccggttgcgccaa 523  Q
    |||||||||||| ||||||||||    
T  2435935 aacaactttacc-gttgcgccaa 2435956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 523
Target Start/End: Complemental strand, 11596650 - 11596502
Alignment:
Q  373 aaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagact 472  Q
    |||||||  ||||||||| | ||  ||| |||||| |||||||||||||||| ||| || ||||| ||| || ||||||||||||||| |||| | ||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtt-tttacacaagaggttgtttctaggact 11596552  T
Q  473 tgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||| ||||| |||||||||||||||| | |||||||| ||||||||||    
T  11596551 tgaacccgtgacatttcagtcacatgacagccactttacc-gttgcgccaa 11596502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 414 - 528
Target Start/End: Complemental strand, 25290267 - 25290146
Alignment:
Q  414 tttggtgtattgtacacaacctt-----atcctattgtttacacaagaggttat--ttccaagacttgaacctgtgacctttcagtcacatgacaacaac 506  Q
    |||||||||||||||||||||||     | ||| || ||||||||||||| | |  |||||||||||||||  |||||||||||||||||||||||||||    
T  25290267 tttggtgtattgtacacaaccttgccttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaac 25290168  T
Q  507 tttaccggttgcgccaaagtta 528  Q
    |||||| |||||||||| ||||    
T  25290167 tttacctgttgcgccaaggtta 25290146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 4430082 - 4430196
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    |||||||||||||||||||| ||  |||| ||| || |||||||||||   | ||| |||||||| |||| |||||||| ||||||||||||||||||||    
T  4430082 caccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaactt 4430181  T
Q  509 taccggttgcgccaa 523  Q
    |||| | ||||||||    
T  4430182 taccagctgcgccaa 4430196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 373 - 511
Target Start/End: Original strand, 44485129 - 44485267
Alignment:
Q  373 aaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagact 472  Q
    |||||||  ||||||| | |||| |||| ||||||  ||||||||||||||||||| || ||||| | | |  |||||||||| |||| |||||| ||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggact 44485228  T
Q  473 tgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
      |||| ||||||||||| ||||||||||||||||||||    
T  44485229 ataacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 441 - 513
Target Start/End: Original strand, 2435981 - 2436053
Alignment:
Q  441 tattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||| |||||||| |||||| |||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  2435981 tattttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccg 2436053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 462 - 534
Target Start/End: Complemental strand, 34714672 - 34714600
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||| |||||    
T  34714672 tttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttacccctc 34714600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 453 - 513
Target Start/End: Complemental strand, 52910275 - 52910215
Alignment:
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52910275 aagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttaccg 52910215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 403 - 534
Target Start/End: Complemental strand, 10163867 - 10163736
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| ||||||||| ||||||||| |||| |||||| |||| |||||| |||||||| ||| ||  |||| ||| ||| || ||| || ||||||||||    
T  10163867 gggtcccaccatttgatgtattgtatacaatcttatcatattttttacataagaggttgttttcagaacttaaacttgtaacattttagccacatgacaa 10163768  T
Q  503 caactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||||||| |||| |||||    
T  10163767 caactttatcagttgcgccaatgttacccctc 10163736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 414 - 513
Target Start/End: Original strand, 17470407 - 17470506
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||||| || ||||| ||| || ||||||||||||| | |||| | ||||||||||  ||||| ||||||||| |||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttaccg 17470506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 437
Target Start/End: Complemental strand, 23796629 - 23796539
Alignment:
Q  347 ctaataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaacctta 437  Q
    |||| |||||| || |||||| |||||||||||  ||||| ||| | ||||||| ||||||||||||||||||||||||||| ||||||||    
T  23796629 ctaaaaaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaacctta 23796539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 497
Target Start/End: Original strand, 35253186 - 35253329
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||| ||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| |  ||||||    
T  35253186 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--tttaca 35253283  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacat 497  Q
    ||||||| | |||| | |||||||||| |||| |||||||||||||    
T  35253284 caagaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 528
Target Start/End: Original strand, 12126836 - 12127010
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||| | || ||||| |||||  ||||| ||| | || |||| |||||| ||| |||||||||||||||| || ||||| ||| ||  |||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgtt--ttaca 12126933  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||| | | ||||||  |||| |||| ||||||||||| | ||||||||||||||||||  |||||||||| ||||    
T  12126934 caagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 27136680 - 27136812
Alignment:
Q  382 gcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctg 480  Q
    |||||| || ||||| ||| |||||| |||||||| |||||||||||| |||||||| | | || ||||||||||||||| || |||  ||||||||  |    
T  27136680 gcatacacatgatctaggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcg 27136779  T
Q  481 tgacctttcagtcacatgacaacaactttaccg 513  Q
    || |||| || |||| |||||||||||||||||    
T  27136780 tgtccttccaatcacgtgacaacaactttaccg 27136812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 469 - 537
Target Start/End: Complemental strand, 40424784 - 40424716
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctccaa 537  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  40424784 gacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttaccccaccaa 40424716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 352 - 439
Target Start/End: Original strand, 1517310 - 1517397
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatc 439  Q
    |||||| ||||||||| ||||||||||| |||||||||| | |||| || |||||| ||||| |||||||||||||| || |||||||    
T  1517310 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatc 1517397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 511
Target Start/End: Complemental strand, 19701713 - 19701570
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||||||||  ||||||||| | || |||| |||| | |||||||| |||||||||||| || ||||| |   || ||||||||||||| | ||| ||    
T  19701713 cactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgttttca 19701614  T
Q  468 agacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
     ||||| |||| ||||| ||||||||||| ||||||||||||||    
T  19701613 tgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 31272467 - 31272522
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  31272467 tttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 352 - 467
Target Start/End: Original strand, 31382213 - 31382327
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||||||||||| ||||||||  ||||| ||| | ||  ||| |||||| |||||||||||||||||||| || ||||||||| || ||||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtt-tttaca 31382311  T
Q  452 caagaggttatttcca 467  Q
    ||||||| | ||||||    
T  31382312 caagaggctgtttcca 31382327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 495
Target Start/End: Original strand, 45264415 - 45264542
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||||||||  ||||| ||| | |||| || |||||| |||||||| ||||||||| ||||| |||||  || || ||| ||||||||||| ||||||    
T  45264415 cactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttcca 45264514  T
Q  468 agacttgaacctgtgacctttcagtcac 495  Q
     ||||||||| |||||||||||| ||||    
T  45264515 ggacttgaacatgtgacctttcaatcac 45264542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 50812037 - 50811928
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||||| |||||||| ||| || ||| |||||||| | | |||||| ||| |||  | |||||||||||||||| ||||||||||||||||    
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T
Q  513 ggttgcgccaa 523  Q
     ||||||||||    
T  50811937 -gttgcgccaa 50811928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 4349796 - 4349699
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || |||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 528
Target Start/End: Original strand, 18335338 - 18335463
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| || |||||| |||||||||| |||| ||| |||| | |||| |||||||  | |||||| ||||| ||| ||||||||||||| ||||||||||    
T  18335338 gggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgacaa 18335437  T
Q  503 caactttaccggttgcgccaaagtta 528  Q
     ||||||| |  ||||||||| ||||    
T  18335438 aaactttatcacttgcgccaaggtta 18335463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 525
Target Start/End: Original strand, 34679275 - 34679390
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    ||||||||| ||||| |||| ||  |||| ||| || ||||||||||||||| |||| | || | |||| |||||  ||||||||||||||||| |||||    
T  34679275 caccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctaggaatggaacatgtgatatttcagtcacatgacaataactt 34679374  T
Q  509 taccggttgcgccaaag 525  Q
    |||| ||||||||||||    
T  34679375 tacc-gttgcgccaaag 34679390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 534
Target Start/End: Complemental strand, 22151568 - 22151481
Alignment:
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||| |||||| | ||||||  |||||||||| ||||||| |||||| ||||||||||||||| | ||||||| ||| |||||||||    
T  22151568 ttacataagaggctgtttccagaacttgaacctatgaccttacagtcagatgacaacaactttatcagttgcgctaaaattatccctc 22151481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 414 - 500
Target Start/End: Original strand, 19974136 - 19974221
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgac 500  Q
    ||||||||||||||| |||||||  |||||| |||||||  |||| | ||||||||||||||||| |||| ||||||||||| ||||    
T  19974136 tttggtgtattgtacgcaaccttgccctatt-tttacacttgaggctgtttccaagacttgaacccgtgatctttcagtcacgtgac 19974221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 470 - 528
Target Start/End: Complemental strand, 21006185 - 21006127
Alignment:
Q  470 acttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||| ||||    
T  21006185 acttgaacctttgacctttcagtcgcatgacaacaattttaccggttgcgtcaaggtta 21006127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 525
Target Start/End: Original strand, 49545964 - 49546078
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgttt-acacaa---gaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttt 509  Q
    |||||||||||||||||||  ||| |||||| ||| ||||||   |||||| |||  |  |||||||||||| ||||||||| ||| |||||||||||||    
T  49545964 tttggtgtattgtacacaattttaccctatttttttacacaattagaggttgttttaagaacttgaacctgtaacctttcagccacgtgacaacaacttt 49546063  T
Q  510 accggttgcgccaaag 525  Q
    ||| ||||||||||||    
T  49546064 acc-gttgcgccaaag 49546078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 512
Target Start/End: Original strand, 50760288 - 50760385
Alignment:
Q  415 ttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||| ||| || ||||| ||  || | ||||||||||| | ||| || |||||||||| ||||||| |||||||||||||||| ||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 513
Target Start/End: Original strand, 10378834 - 10378885
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||| |||||||||| || ||||||||||||| |||||||||||||||||    
T  10378834 tttccaggacttgaacccgtaacctttcagtcacgtgacaacaactttaccg 10378885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 512
Target Start/End: Original strand, 15511157 - 15511310
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgta--cacaaccttatcctattgtttacacaagagg 458  Q
    |||||| |||||||||||   |||||||| | ||  ||| |||||  |||||||| |||||||||||  | || ||||| ||| || |||||||||||||    
T  15511157 cccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttacacaagagg 15511256  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
       |||||| ||||| ||  ||||||||||||| ||||| ||||||||||||||    
T  15511257 cggtttccaggacttcaatatgtgacctttcagccacattacaacaactttacc 15511310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 18335914 - 18336016
Alignment:
Q  421 tattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgc 520  Q
    |||||||| || ||||| ||| || |||| |||| || |||||| ||  |||||||| ||||||||||||| |||||| ||||||||||| |  ||||||    
T  18335914 tattgtacgcagccttaccctgttctttaaacaatagattattttcagaacttgaacatgtgacctttcagacacatggcaacaactttatcacttgcgc 18336013  T
Q  521 caa 523  Q
    |||    
T  18336014 caa 18336016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 511
Target Start/End: Original strand, 39215027 - 39215117
Alignment:
Q  421 tattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    |||||||| || ||||| ||  || ||||||||||||||| ||||||  |||||||| || ||||||| |||||| |||||| ||||||||    
T  39215027 tattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaacttgggaccttttagtcacgtgacaataactttac 39215117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 21910693 - 21910753
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||| |||||| |||||||||||||||||||| |||||||| |||||| |||||| ||||||    
T  21910693 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatt-tttacataagagg 21910753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 467
Target Start/End: Original strand, 34149009 - 34149074
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||||||||||||||| | |||||| |||||||| |||||| | ||||||||||| | ||||||    
T  34149009 ggggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttcca 34149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 19656167 - 19656263
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||||||||||||| | | ||| | | || ||||||||||||| | |||||||| ||||| |  ||||||||| ||||||  |||||||||||||    
T  19656167 tttggtgtattgtacatagcgttaccatgttttttacacaagaggctgtttccaagccttgagctagtgacctttgagtcacgcgacaacaacttta 19656263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 512
Target Start/End: Original strand, 25554817 - 25554881
Alignment:
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||| |||||| ||||| |||  ||| ||||| |||||| ||||||||||||||||    
T  25554817 tacacaagaggttgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttacc 25554881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 28894574 - 28894645
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcc 440  Q
    |||||||||||| ||||| ||| | ||| ||| ||||| | |||||||| |||||||||| |||||||||||    
T  28894574 cactaaagctctcgcatatgcagggtctaggaaggggttttaccatttgatgtattgtacgcaaccttatcc 28894645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 523
Target Start/End: Complemental strand, 6358180 - 6358123
Alignment:
Q  465 ccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||| |||||||||||||||||||||||  ||| ||||| |||||| ||||||||||    
T  6358180 ccaagatttgaacctgtgacctttcagtcatgtgaaaacaaatttacc-gttgcgccaa 6358123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 517
Target Start/End: Complemental strand, 21723727 - 21723658
Alignment:
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttg 517  Q
    |||||||||||| | |||||| |||| |||| ||| ||| | |||||||||||||||||||||||| ||||    
T  21723727 ttacacaagaggctgtttccaggact-gaacttgtaaccatccagtcacatgacaacaactttaccagttg 21723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 507
Target Start/End: Original strand, 49722641 - 49722726
Alignment:
Q  421 tattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaact 507  Q
    |||||||| ||| |||| |||||| |||  |||||||||| ||| || ||||| |||| ||||||||||| |||| |||||||||||    
T  49722641 tattgtacgcaatcttaccctattatttt-acaagaggttgtttacatgacttaaacccgtgacctttcattcacgtgacaacaact 49722726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 13082431 - 13082387
Alignment:
Q  481 tgacctttcagtcacatgacaacaactttaccggttgcgccaaag 525  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  13082431 tgacctttcaatcacatgataacaattttaccggttgcgcgaaag 13082387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 478
Target Start/End: Complemental strand, 22324989 - 22324926
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacc 478  Q
    ||||||||||||||  || ||||| ||| || ||||||||||||| | |||||||||||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtt-tttacacaagaggctgtttccaagacttgaacc 22324926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 350 - 534
Target Start/End: Complemental strand, 44530287 - 44530103
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| ||||||||| |||||||||||  ||||||||| | ||  ||| |||||| |||||||||||||||||||| || ||||| ||| || ||||    
T  44530287 ataaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttta 44530188  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| ||||||||||||||||| ||||||||  |||||||||||| |||||||||| |||||||||| |||| |||||    
T  44530187 cacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttacccctc 44530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 350 - 534
Target Start/End: Original strand, 39460991 - 39461177
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtt 447  Q
    |||||||| ||||||||| |||||||||||  ||||||||| | || |||| ||||||||||||||  ||||||||||||| || |||||  || || ||    
T  39460991 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttt 39461090  T
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||| |||||    
T  39461091 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttacccctc 39461177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 35261815 - 35261633
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||||||||||  ||||||||| | ||  ||| |||||| |||||||||||||||||||| |||||||| ||| || ||||||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttaca 35261716  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||  | |||||| | |||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  35261715 caagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 35261633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 348 - 534
Target Start/End: Complemental strand, 36720936 - 36720750
Alignment:
Q  348 taataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtt 447  Q
    |||||||||| ||||| ||| ||||||||||   ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || ||    
T  36720936 taataaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 36720837  T
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||| |||||| |||| |||||    
T  36720836 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctc 36720750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 28817625 - 28817807
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||| | |||||||||||  ||||||||| | || |||| |||||| ||||||| |||||||||||| || ||||| ||| || ||||||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttaca 28817724  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||| |||| |||| |||||    
T  28817725 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 28817807  T

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Target: chr8; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 534
Target Start/End: Original strand, 12670257 - 12670429
Alignment:
Q  360 aacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggt 459  Q
    |||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  ||||||||||||     
T  12670257 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttacacaagaggc 12670354  T
Q  460 tatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  12670355 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 29521691 - 29521866
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||||||| |||||||||||  ||||||||| | ||||||| ||| || |||||||||||||||||||| || ||||| ||| || |||| ||||||||    
T  29521691 caacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagagg 29521790  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
     | |||||| |||||||||| |||||||| |||||||| ||||||||||||| | |||||||||| |||| |||||    
T  29521791 ctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttacccctc 29521866  T

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Target: chr8; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 359 - 523
Target Start/End: Original strand, 18164766 - 18164929
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||||||| |||||||||||  ||||||||| | || ||||   |||| || | ||||||||||||||| |||||||| ||| || |||||||||||||    
T  18164766 caacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtt-tttacacaagagg 18164864  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
     | |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  18164865 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaa 18164929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 397 - 535
Target Start/End: Original strand, 20869544 - 20869678
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||||||||  ||||||||||||||||| ||||| ||| ||  |||||||||||| | |||||| |||||||||| |||||||||||||||||    
T  20869544 gggaaggggtctcacc--ttggtgtattgtacacagccttaccctgtt--ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcaca 20869639  T
Q  497 tgacaacaactttaccggttgcgccaaagttatccctcc 535  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  20869640 tgacaacaactttaccagttgcgccaaggttatccctcc 20869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 30454096 - 30454276
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| ||||||||||||||| |||| || ||||| | | ||  |||||    
T  30454096 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgtt--ttaca 30454193  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  30454194 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30454276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 353 - 523
Target Start/End: Complemental strand, 17823711 - 17823541
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| ||||||||||| |||||| ||| | |  |||| |||||  |||||||||||||||| ||| ||  ||||||||  | |||||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacac 17823612  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||| | |||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  17823611 aagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 17823541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 353 - 534
Target Start/End: Complemental strand, 13160836 - 13160656
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||  |||| ||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || |||||||    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacac 13160738  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||| | |||| | |||||||||| |||||||| |||||||||||||||||||||||| |||||||| | |||| |||||    
T  13160737 aagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttacccctc 13160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 369 - 523
Target Start/End: Original strand, 44781520 - 44781675
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcc 466  Q
    |||||||||||  ||||||||| | |||||||||||||| || |||||  ||||||||||||||| ||||| ||| |  ||||||||||||||| |||||    
T  44781520 cactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttcc 44781619  T
Q  467 aagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    | |||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||    
T  44781620 aggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgccaa 44781675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 354 - 534
Target Start/End: Complemental strand, 45071398 - 45071219
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacaca 453  Q
    |||| ||||||||| |||| ||||||  ||||||||||| || |||| |||||| |||||||||||||||||||| || ||||| ||| || ||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacaca 45071300  T
Q  454 agaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||| | ||||||  ||||||||| |||||||| || ||||||||||||||||||||| ||  |||||| |||| |||||    
T  45071299 agaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttacccctc 45071219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 534
Target Start/End: Original strand, 7136534 - 7136710
Alignment:
Q  360 aacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagag 457  Q
    |||||||| |||||||||||  ||||| ||  | || |||| |||||| |||||||  ||||||||||||| || ||||| |||  | ||||||||||||    
T  7136534 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagag 7136633  T
Q  458 gttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||| |||||| ||||||||||  ||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  7136634 gttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 7136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 22598263 - 22598132
Alignment:
Q  382 gcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgt 481  Q
    ||||||||||| || ||||  ||||||||||| ||||||||||||||| | ||||| ||| || ||||||||||||||| |||||| || ||||||| ||    
T  22598263 gcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgt 22598164  T
Q  482 gacctttcagtcacatgacaacaactttaccg 513  Q
    |||||||||||||  |||||||||||||||||    
T  22598163 gacctttcagtcatgtgacaacaactttaccg 22598132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 522
Target Start/End: Original strand, 8897763 - 8897933
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||| ||| || ||||||||  ||||| ||| | || |||| |||||| ||||||||||||||||||||  | ||||| |||||| ||||||    
T  8897763 aaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttaca 8897862  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgcca 522  Q
    |||| |||| |||||| ||||| |||| |||||||| | |||||||||||||||||||||| |||| ||||    
T  8897863 caagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttgtgcca 8897933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 528
Target Start/End: Original strand, 20284068 - 20284248
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt- 448  Q
    ||||| |||||||||| ||||||| |||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||     
T  20284068 aaaagaacaacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttt 20284167  T
Q  449 -acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
     | |||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  20284168 tatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggtta 20284248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 351 - 534
Target Start/End: Complemental strand, 12626027 - 12625843
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcct-attgttta 449  Q
    ||||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||  ||  |||| |||  || ||||    
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgttttttta 12625928  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||| |||||| ||||||| || |||||||   ||||||| ||||||||||||||| ||||||  || ||||||||||    
T  12625927 cacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagttgcgtgaacgttatccctc 12625843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 352 - 528
Target Start/End: Original strand, 21070696 - 21070877
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt- 448  Q
    ||||| |||||||||| ||||||| |||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||     
T  21070696 aaaagaacaacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttt 21070795  T
Q  449 --acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
      | |||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  21070796 ttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggtta 21070877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 506
Target Start/End: Complemental strand, 31457310 - 31457155
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| ||| ||||| ||||| |||||  ||||||||| | | ||||| ||||||  |||||||| |||||||||| || |||| ||||||| ||||    
T  31457310 ataaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctatt-ttta 31457212  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaac 506  Q
    ||||||||||| ||| || |||||||||| |||||||||||| ||||||||||||||    
T  31457211 cacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 534
Target Start/End: Complemental strand, 26954272 - 26954086
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||| |||||| || |||||||||||  ||||| || || ||||||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||    
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 26954173  T
Q  449 -acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
     |||||||||| | |||||| |||||||||| ||||||||  | |||||||||||||||||||||  || ||||||||||| |||||    
T  26954172 tacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaattacgccaaagttacccctc 26954086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 352 - 528
Target Start/End: Complemental strand, 25250660 - 25250482
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| ||||||| |||  ||||| ||  | |  |||| |||||| |||||||  ||||||||||||| || || || |||||| ||||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatttttta 25250561  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||| ||| | |||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| ||||    
T  25250560 cacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaaggtta 25250482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 369 - 534
Target Start/End: Complemental strand, 2626641 - 2626473
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcc---tattgtttacacaagaggttatttc 465  Q
    |||| ||||||  ||||| ||| | ||||||| |||||| || ||||||||||||||||| ||  |||| ||   | || ||||||||||||| | ||||    
T  2626641 cactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttc 2626542  T
Q  466 caagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    || |||||||||| |||||||||| ||||||||||||||||||||||  ||||||||| |||| |||||    
T  2626541 caggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttacccctc 2626473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 352 - 523
Target Start/End: Complemental strand, 6760960 - 6760787
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  ||||| ||  | || | || |||||| |||||||  |||||||||||||  | ||||| ||| || ||||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgtttttta 6760861  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||| | |||||| |||||||||| ||||||||  ||||| ||||||||||||||||| ||||||||||    
T  6760860 cacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaa 6760787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 478
Target Start/End: Original strand, 5135289 - 5135414
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| || |||||| ||| ||||||| |||||||||| | || |||| |||||| ||||||||||||||||||||||| ||||| ||| || ||||||    
T  5135289 aaaagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttaca 5135387  T
Q  452 caagaggttatttccaagacttgaacc 478  Q
    ||||||| | |||||| ||||||||||    
T  5135388 caagaggctgtttccaggacttgaacc 5135414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 412 - 534
Target Start/End: Original strand, 40604964 - 40605086
Alignment:
Q  412 catttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    ||||| ||||||||||| ||||||||||| ||| ||||||||| || || |||||| ||||||||||  | | | | || ||||||||||||||||||||    
T  40604964 catttagtgtattgtacgcaaccttatccaattttttacacaaaagattgtttccatgacttgaacccataatcatccaatcacatgacaacaactttac 40605063  T
Q  512 cggttgcgccaaagttatccctc 534  Q
    | ||||||||||||||| |||||    
T  40605064 cagttgcgccaaagttacccctc 40605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 362 - 523
Target Start/End: Original strand, 8483947 - 8484107
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtta 461  Q
    |||||| | |||||||||  ||||||||| | ||||||| |||||| ||||| |||||||||||||| || ||||  ||| || |||||||||||||||     
T  8483947 cccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttg 8484046  T
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||| ||||||||||  |||| ||| |||||| || ||||  ||||||| ||||||||||    
T  8484047 tttccaggacttgaacccatgacatttaagtcacgtggcaaccgctttacc-gttgcgccaa 8484107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 28407458 - 28407381
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  28407458 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 28407381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 24365089 - 24365218
Alignment:
Q  383 catacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcct-attgtttacacaagaggttatttccaagacttgaacctgt 481  Q
    |||||||| | || |||| |||||| |||||||||||||||||| | || ||||| ||| ||| ||||||||||||| | |||| | | |||||||| ||    
T  24365089 catacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgt 24365188  T
Q  482 gacctttcagtcacatgacaacaactttac 511  Q
    ||| ||| ||||||||||||||||||||||    
T  24365189 gacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 462 - 534
Target Start/End: Complemental strand, 24245477 - 24245405
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||    
T  24245477 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttacccctc 24245405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 446 - 533
Target Start/End: Complemental strand, 11748341 - 11748254
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
    |||||| |||||| | ||||||||||||||||| ||||| |||||||||||||||||||| || ||| ||||| ||||||||| ||||    
T  11748341 tttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgcaccaaagttacccct 11748254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 509
Target Start/End: Complemental strand, 35106008 - 35105902
Alignment:
Q  404 ggtctcaccatt-tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    |||| ||||||| ||||||||||||| || |||||  || |  ||||||||||||||| |||||| |||||||||| |||||||||||| ||| ||||||    
T  35106008 ggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaa 35105909  T
Q  503 caacttt 509  Q
    |||||||    
T  35105908 caacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 489
Target Start/End: Complemental strand, 389770 - 389642
Alignment:
Q  363 ccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt--acacaagaggtt 460  Q
    ||||| |||||||||||| ||||||||| | || || | ||| || || ||||||||||||||||| |||||||| ||| || |||  |||||||||| |    
T  389770 ccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggt 389671  T
Q  461 atttccaagacttgaacctgtgacctttc 489  Q
     |||||| |||||||||| ||||||||||    
T  389670 gtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 513
Target Start/End: Original strand, 11000998 - 11001110
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcct-attgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgac 500  Q
    |||||| ||||||||||||||||||||||| ||||||| |  || ||||||||  ||||| ||| ||  | ||||||| | ||||||||| |||||||||    
T  11000998 ggggtcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaatttgaacccgcgacctttcaatcacatgac 11001097  T
Q  501 aacaactttaccg 513  Q
    |||||||||||||    
T  11001098 aacaactttaccg 11001110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 42083742 - 42083868
Alignment:
Q  397 gggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcac 495  Q
    |||| |||||| |||||||| ||| || ||||| || ||||  || ||| ||||||||| ||| | |||||| |||||||||| ||||||||||||||||    
T  42083742 gggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcac 42083841  T
Q  496 atgacaacaactttaccggttgcgccaa 523  Q
     ||||||||| |||||| ||||||||||    
T  42083842 gtgacaacaattttacc-gttgcgccaa 42083868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 30962859 - 30962942
Alignment:
Q  439 cctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||| ||||||||||||| | |||||| ||||||||   ||||||||||| |||||||||||||||||| || ||||||||||    
T  30962859 cctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttttcc-gttgcgccaa 30962942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 478
Target Start/End: Complemental strand, 5689756 - 5689641
Alignment:
Q  363 ccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttat 462  Q
    ||||| |||||||||||   |||||||| | |  |||| |||||  |||||||||||||||||||| || ||||| |||  | ||||||||||||| |||    
T  5689756 ccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctat 5689657  T
Q  463 ttccaagacttgaacc 478  Q
    || |||||||||||||    
T  5689656 ttacaagacttgaacc 5689641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 14018029 - 14018138
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||| ||||||||||| ||  || | ||| || ||||||||||||  | |||||||||||||||||  |||||||||| |||| |||||||||| |||||    
T  14018029 atttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattacc 14018128  T
Q  513 ggttgcgccaa 523  Q
     ||||||||||    
T  14018129 -gttgcgccaa 14018138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 23000263 - 23000365
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| |||||||||||||||||||   ||||||| | | || ||||||||||||| | |||||| |||||  ||| |||||||||||||||||    
T  23000263 gggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtt-tttacacaagaggctgtttccaggactt--acccgtgacctttcagtcaca 23000359  T
Q  497 tgacaa 502  Q
    ||||||    
T  23000360 tgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 36918199 - 36918102
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    ||||||||||||||||||| ||||| ||| || |||||| ||||  || ||||||  |||||||| ||||||||||||||  ||| ||||||| ||||    
T  36918199 atttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttcagttccataacaacaatttta 36918102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 467
Target Start/End: Complemental strand, 29877213 - 29877115
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||| ||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || ||||||||| ||| | ||||||    
T  29877213 cactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttcca 29877115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 31454203 - 31454153
Alignment:
Q  473 tgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||| ||||||||||||  ||||||||||||||| |||||||||||||||    
T  31454203 tgaacatgtgacctttcaaccacatgacaacaactataccggttgcgccaa 31454153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 26102659 - 26102578
Alignment:
Q  346 tctaataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgta 427  Q
    ||||| |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||    
T  26102659 tctaaaaaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 16013592 - 16013528
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt 416  Q
    |||||||||||||||| |||||||||||  ||||| ||| | ||||||| |||||| ||||||||    
T  16013592 aaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccattt 16013528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 513
Target Start/End: Original strand, 44742567 - 44742679
Alignment:
Q  402 ggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgac 500  Q
    |||||| |||||||| |||||||||||| || ||||| ||| || |||||||| ||| || ||||||  ||||||||   ||||||| || ||||  |||    
T  44742567 ggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgac 44742666  T
Q  501 aacaactttaccg 513  Q
    |||||||||||||    
T  44742667 aacaactttaccg 44742679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 458
Target Start/End: Complemental strand, 10857965 - 10857858
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcct-attgtttac 450  Q
    |||||| ||||||||| |||||||||||  ||||||||||| ||  ||| | |||| ||||| |||||||||||| | || ||||| |||  || |||||    
T  10857965 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttac 10857866  T
Q  451 acaagagg 458  Q
    ||||||||    
T  10857865 acaagagg 10857858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 19729431 - 19729391
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaacctta 437  Q
    |||| |||||| ||||||||||||||||||||||| |||||    
T  19729431 gggaaggggtcccaccatttggtgtattgtacacagcctta 19729391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 20870061 - 20869954
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  ||||| ||  | ||  ||| |||||| |||||||  ||||||||||||| || ||||| ||| || ||||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 20869962  T
Q  450 cacaagag 457  Q
    ||||||||    
T  20869961 cacaagag 20869954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 5e-45; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 350 - 534
Target Start/End: Original strand, 8455313 - 8455497
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| |  ||||    
T  8455313 ataaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgtttta 8455412  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  8455413 cacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8455497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 353 - 534
Target Start/End: Original strand, 25079717 - 25079899
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-aca 451  Q
    ||||| ||||||||| |||||||||||||||||||||| | || |||| |||||| ||||||| |||||||||||| || ||||| | | || ||| |||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttaca 25079816  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| |||| |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  25079817 caagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 25079899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 349 - 534
Target Start/End: Original strand, 21779257 - 21779440
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| |||||||| ||| ||  ||    
T  21779257 aataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtt--tt 21779354  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||| | | |||| |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||| |||||    
T  21779355 acacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttacccctc 21779440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 534
Target Start/End: Complemental strand, 9671316 - 9671134
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| |  |||||    
T  9671316 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--tttac 9671219  T
Q  451 acaagaggttatttccaagacttgaacctgtgaccttt-cagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||| || ||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  9671218 acaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttacccctc 9671134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 534
Target Start/End: Complemental strand, 14530455 - 14530272
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||  |||||||||||||  | ||||| ||| || ||||     
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttat 14530356  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  14530355 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 14530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 353 - 533
Target Start/End: Complemental strand, 10543835 - 10543653
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| ||||||||  |||||||||||| || ||||| ||| || |||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 10543736  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
    ||||||||   |||||| |||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||| ||||    
T  10543735 acaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccct 10543653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 384 - 534
Target Start/End: Original strand, 12023950 - 12024099
Alignment:
Q  384 atacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtga 483  Q
    ||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || ||||||||||||| | |||||| |||||||||| ||||    
T  12023950 atacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacttgaacccgtga 12024048  T
Q  484 cctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  12024049 cctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12024099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 350 - 528
Target Start/End: Complemental strand, 11514573 - 11514396
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| ||| ||||| |||||||||||  ||||||||| | ||||||| ||| || |||||||||||||||||||| || |||||   | || ||||    
T  11514573 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgtttttta 11514475  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||||| | |||||| || ||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  11514474 cacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 11514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 369 - 528
Target Start/End: Original strand, 19977730 - 19977889
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    |||||||||||  |||||| |||| |  |||| ||| || |||||||||||||||||||| ||||||||||||||| |||||| |||||| | ||||||     
T  19977730 cactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccag 19977829  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
     ||||||||| |||||||||| |||||||||||||||||| ||| ||| |||||| ||||    
T  19977830 aacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggtta 19977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 518
Target Start/End: Original strand, 24200622 - 24200790
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| ||||||||||||  ||||| || | || |||| ||| || ||||||||  |||||||||||| || ||||| ||| || ||||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttta 24200721  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgc 518  Q
    ||||||||| | |||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  24200722 cacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 528
Target Start/End: Original strand, 25249737 - 25249912
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||||||||||  ||||||||| | |  |||| ||| || |||||||||||||||||||| || ||||| ||| || | ||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtt-tgtaca 25249835  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||  | |||||| |||||||||| |||||||| ||||||||||||||||||||||||  ||||||||| ||||    
T  25249836 caagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggtta 25249912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 353 - 534
Target Start/End: Complemental strand, 23397899 - 23397720
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| ||||| |||||  ||||| | | | || | || |||||| ||||||||||||||||||||  | ||||| ||||||  ||||||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctatt--ttacac 23397802  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||| | |||||| ||||||||||  |||||||||||||||||||||||||||||||| ||||| |||| |||| |||||    
T  23397801 aagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 23397720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 352 - 517
Target Start/End: Complemental strand, 17668138 - 17667973
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||||||||||    ||||||| | |  | || |||||  |||||||||||||||||||| || ||||| |||  | ||||||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttaca 17668039  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttg 517  Q
    ||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  17668038 caagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 351 - 522
Target Start/End: Original strand, 39914304 - 39914475
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-a 449  Q
    ||||||| ||||||| | |||||||||||  ||||||||| | || || | |||||| ||||||| ||||||||||||||| ||||| ||| || ||| |    
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcagggtcaggaa-ggggtcccaccattcggtgtattgtacacatccttaccctgttttttta 39914402  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgcca 522  Q
    ||||||||||| ||||||  |||||| || |||||||| |||||||||||||||||||||||| | |||||||    
T  39914403 cacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 352 - 503
Target Start/End: Complemental strand, 25641637 - 25641487
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||||||| ||||| |||||||||||| ||||||||| |||  |||| |||||| ||| |||||||||||||||| |||| ||| ||| || || |||    
T  25641637 aaaaggacaatccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgtt-ttcaca 25641539  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaac 503  Q
    ||| | | | |||||| |||||||||| ||||||||||||||||||||||||    
T  25641538 caaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 7214665 - 7214488
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttg--gtgtattgtacacaaccttatcctattgtttacacaaga 456  Q
    ||||| ||| ||||||| |||| |||||||||   || | || ||| |||||||||||   ||||||||||| || ||||| ||| |  |||||||||||    
T  7214665 caacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaaga 7214566  T
Q  457 ggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |  | |||||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  7214565 gactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaaagttacccctc 7214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 10546299 - 10546153
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcct-attgtttac 450  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| |||  || ||||     
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttat 10546200  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacat 497  Q
    |||||||| | |||||| |||||||||| ||||||||||||||||||    
T  10546199 acaagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 352 - 497
Target Start/End: Complemental strand, 14444864 - 14444720
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||| ||| |||||||||||  ||||||||| | || |||| |||||| ||||||||||||||| ||||||| ||||| ||| || ||||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtt-tttaca 14444766  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacat 497  Q
    ||||||| | |||||| |||||||||| |||||||| |||||||||    
T  14444765 caagaggctgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 352 - 517
Target Start/End: Complemental strand, 17623700 - 17623535
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||||| || ||||||||||    |||||||| |||  |||| |||||  |||||||||||||||||||| || ||||| |||  | ||||||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttaca 17623601  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttg 517  Q
    ||||||||| |||| | |||||||||| |||||||| ||||| |||||||||||||||||| ||||    
T  17623600 caagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 352 - 528
Target Start/End: Complemental strand, 17896396 - 17896219
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-ac 450  Q
    |||||| |||| || | |||||||||||   |||||||| | || | || |||||| ||||||||||| |||||||| || ||||| |||||| ||| ||    
T  17896396 aaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttac 17896297  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||||| |||| | |||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  17896296 acaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgtcaaggtta 17896219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 412 - 508
Target Start/End: Original strand, 17380296 - 17380391
Alignment:
Q  412 catttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    |||||||||||||| ||||||||||| ||| || | ||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  17380296 catttggtgtattgcacacaaccttaccctgtt-tatacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 512
Target Start/End: Original strand, 40416871 - 40417030
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| |||||||||||| ||||| ||| | ||    |  ||||| || || ||||||||||||||||| ||||  ||| || |||| ||    
T  40416871 aaagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttatac 40416970  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  40416971 aagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacc 40417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 416 - 534
Target Start/End: Complemental strand, 17705567 - 17705449
Alignment:
Q  416 tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggt 515  Q
    |||||||||||||||| |||||  || ||||||||||||||||   |||||| |||||||||| ||||||||  ||||||||||||||||||||||| ||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagt 17705468  T
Q  516 tgcgccaaagttatccctc 534  Q
    ||| |||| |||| |||||    
T  17705467 tgcaccaaggttacccctc 17705449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 352 - 535
Target Start/End: Original strand, 26684619 - 26684804
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-ac 450  Q
    |||||||||| ||||| || ||||||||  ||||||||| | |  |||| | |||| |||||||| || |||||||| || ||||| | |||| ||| ||    
T  26684619 aaaaggacaatccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttac 26684718  T
Q  451 acaagaggt-tatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcc 535  Q
    ||||||||| | ||| || ||||| ||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||    
T  26684719 acaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgctaaagttacccctcc 26684804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 513
Target Start/End: Original strand, 21377117 - 21377233
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| |||||||||||| ||||||| || ||||| ||| || ||||||||||||| | |||| | |||||||||  || ||||||||||||||    
T  21377117 gggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcaca 21377216  T
Q  497 tgacaacaactttaccg 513  Q
    |||||||||||||||||    
T  21377217 tgacaacaactttaccg 21377233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 373 - 512
Target Start/End: Original strand, 32781308 - 32781447
Alignment:
Q  373 aaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagact 472  Q
    |||||||  |||||| || | ||||||| |||||| |||||||||||||||||||| ||  |||| ||| || ||||||||||||||| ||||| |||||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagact 32781407  T
Q  473 tgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||  ||||||||||||  ||||  |||||||||||||    
T  32781408 tgaactcgtgacctttcagcaacattgcaacaactttacc 32781447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 510
Target Start/End: Complemental strand, 5841167 - 5841006
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||| |||| |||| |||||||||||  ||||| ||  | || |||| |||||| |||||||  || |||||||||| || ||||| |||||| |||    
T  5841167 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctatttttt 5841068  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||| ||| | |||| | |||||||||| |||||||| ||||||||||||||||||||||    
T  5841067 acacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 22371145 - 22371011
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| |||||||||||||||||||| || ||||| ||| || |||||||  |||| | |||||| |||||||||| |||||||  ||||||||    
T  22371145 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacac--gaggctgtttccaggacttgaacccgtgacctcccagtcaca 22371049  T
Q  497 tgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||||||| |||| ||||| |||| |||||    
T  22371048 tgacaacaactttaccagttgggccaaggttacccctc 22371011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 362 - 523
Target Start/End: Original strand, 4516360 - 4516520
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtta 461  Q
    |||||||||||||||||    |||||||| | || |||| |||||| ||||| |||||||||||||| || | ||  ||| || ||||||||||||| |     
T  4516360 cccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctg 4516459  T
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||| |  |||||||  ||||||||||||||||| |||||||||||||||| ||||||||||    
T  4516460 tttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 4516520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 5450372 - 5450263
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgac 500  Q
    |||||| |||| ||||||||||||||| || ||||| | | || ||| |||||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  5450372 ggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgac 5450273  T
Q  501 aacaacttta 510  Q
    ||||||||||    
T  5450272 aacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 446 - 510
Target Start/End: Complemental strand, 44604896 - 44604832
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  44604896 tttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 409 - 528
Target Start/End: Complemental strand, 27573699 - 27573581
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    |||||||||||||||||||| || ||||| | | || | ||||||||||| | || ||  ||||||||||  ||||||||||||||||||||||||||||    
T  27573699 caccatttggtgtattgtacgcagccttaccatgtt-tatacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactt 27573601  T
Q  509 taccggttgcgccaaagtta 528  Q
    |||| |||||||||| ||||    
T  27573600 taccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 510
Target Start/End: Original strand, 31158438 - 31158598
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||||| | |||  ||||||||||  ||||||||| | ||||||| |||||| ||||||||  ||| |||||||  ||| |||| ||| || ||||    
T  31158438 aaaaggacaatcaggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgtttttta 31158537  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    | ||||||| | |||  ||||||| ||||  ||||||||||||||||||||||||||||||    
T  31158538 cgcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 511
Target Start/End: Original strand, 99278 - 99421
Alignment:
Q  366 gtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttc 465  Q
    ||||||||||||||  |||||| || | |||| || |||||  |||||||||||||||||||| || ||||  | | || |||  |||||||| | ||||    
T  99278 gtacactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtttttt--acaagaggctgtttc 99375  T
Q  466 caagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
     | |||||||||| |||||||||||||||| |||||||||||||||    
T  99376 taggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 403 - 513
Target Start/End: Original strand, 23145748 - 23145858
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| ||||| |||||||||||||| || |||||  || || ||||||||||||  | ||| ||||||||||||| ||||||||||||||||   ||||    
T  23145748 gggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaa 23145847  T
Q  503 caactttaccg 513  Q
    |||||||||||    
T  23145848 caactttaccg 23145858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 403 - 513
Target Start/End: Original strand, 23557538 - 23557648
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| ||||| |||||||||||||| || |||||  || || ||||||||||||  | ||| ||||||||||||| ||||||||||||||||   ||||    
T  23557538 gggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaa 23557637  T
Q  503 caactttaccg 513  Q
    |||||||||||    
T  23557638 caactttaccg 23557648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 473
Target Start/End: Complemental strand, 30826171 - 30826052
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||||||| | ||| |||||||||||  ||||| | | | ||||||| ||| || |||||||||||||||||||| |||||||| |||||| ||||||    
T  30826171 aaaaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaagggttc-caccatttggtgtattgtacgcaaccttaccctatt-tttaca 30826074  T
Q  452 caagaggttatttccaagactt 473  Q
    ||||||| | ||||||||||||    
T  30826073 caagaggctgtttccaagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 513
Target Start/End: Complemental strand, 33795400 - 33795260
Alignment:
Q  373 aaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtatt-gtacacaaccttatcctattgtttacacaagaggttatttccaagac 471  Q
    |||||||  |||||| || | ||||||| |||||| ||||||  |||||||| |||| || ||||| ||| || ||||| ||||||||| |||||  |||    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccata-ggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggac 33795302  T
Q  472 ttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||| ||||||||||| |||| |||||||||||||||||    
T  33795301 ttgaacccgtgacctttcaatcacgtgacaacaactttaccg 33795260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 446 - 513
Target Start/End: Original strand, 29419982 - 29420049
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||||| |||||| |||||||||  |||||||||||||||  |||||||||||||||||    
T  29419982 tttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttaccg 29420049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 513
Target Start/End: Original strand, 44521414 - 44521533
Alignment:
Q  394 tctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtc 493  Q
    ||||||| ||| || | |||||||||||||| ||  || ||||| | | || |||||||||||| || ||||||||| ||||||  ||||||||||||||    
T  44521414 tctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtc 44521513  T
Q  494 acatgacaacaactttaccg 513  Q
    || ||| |||||||||||||    
T  44521514 acgtgataacaactttaccg 44521533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 503
Target Start/End: Original strand, 31821392 - 31821491
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||| || |||||||||||||||||||||||||| |||||| ||||||||   || | |||| | |||||||||  |||||||||||||||||| |||    
T  31821392 ggggtcccatcatttggtgtattgtacacaaccttaccctattttttacaca--cggctgtttctacgacttgaactcgtgacctttcagtcacataaca 31821489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 533
Target Start/End: Complemental strand, 14544103 - 14544018
Alignment:
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
    ||||||||||| | ||||||  || || |||||| ||||||||||||||||||||||||||||||  ||||||||| |||| ||||    
T  14544103 tacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggttacccct 14544018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 523
Target Start/End: Original strand, 24859998 - 24860156
Alignment:
Q  363 ccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttat 462  Q
    ||||| |||||||||||  ||||||||| | || | || |||||   ||||||||||||||||||| || ||| | | | || ||||||| ||||||| |    
T  24859998 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcagcct-accatgtt-tttacaccagaggttgt 24860095  T
Q  463 ttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||| | ||| |||| || ||||| ||||||||||||||||| |||||| ||||||||||    
T  24860096 ttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgccaa 24860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 472
Target Start/End: Complemental strand, 36871627 - 36871509
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || || |||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-ttcaca 36871530  T
Q  452 caagaggttatttccaagact 472  Q
    ||||||| | |||||| ||||    
T  36871529 caagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 516
Target Start/End: Original strand, 45235829 - 45235981
Alignment:
Q  365 ggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctatt-gtttacacaagaggttatt 463  Q
    ||||||||||||||| |||||||| | | ||||| | |||||| |||||||| |||||||  ||  | ||||| ||||||  |||||| |||||  | ||    
T  45235829 ggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtt 45235928  T
Q  464 tccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggtt 516  Q
    || | |||||||||  |||| ||||||||||||||| ||||||||||| ||||    
T  45235929 tctaggacttgaactcgtgatctttcagtcacatgagaacaactttactggtt 45235981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 351 - 512
Target Start/End: Complemental strand, 44643660 - 44643498
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaacctta-tcctattgttta 449  Q
    ||||||| || |||||| |||||| ||||  ||||||||| | ||||||| |||||| |||||||||||  ||||||| || ||||| ||   || ||||    
T  44643660 taaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgttttttta 44643561  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |  |||||| | |||| |  ||||||||  ||||||||||||||||||||  |||||||||||    
T  44643560 cggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacc 44643498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 453
Target Start/End: Complemental strand, 25632644 - 25632544
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| |||||||||||  ||||||| ||| |  |||| ||  || |||||||||||||||||||| || ||||||||| || |||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttttacac 25632545  T
Q  453 a 453  Q
    |    
T  25632544 a 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 528
Target Start/End: Original strand, 27466262 - 27466305
Alignment:
Q  485 ctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  27466262 ctttcagtcacatgacaacaactttaccagttgcgccaatgtta 27466305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 534
Target Start/End: Original strand, 39189556 - 39189602
Alignment:
Q  488 tcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 39189602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 499
Target Start/End: Complemental strand, 19615112 - 19614981
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcc 466  Q
    ||||||||||| |||||||||| | |  |||| |||||| ||| |||  |||| |||||||| ||  |||| ||| || |||| |||||||| | ||||     
T  19615112 cactaaagctcctgcatacgcagggttcgggaaggggtc-cactattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttca 19615014  T
Q  467 aagacttgaacctgtgacctttcagtcacatga 499  Q
    | |||||||||| ||||||||||||||||||||    
T  19615013 aggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 510
Target Start/End: Complemental strand, 17473013 - 17472949
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    ||||||||| ||| |||||| ||||| |||||| ||||||||||| |||  ||||||||||||||    
T  17473013 tttacacaataggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaacttta 17472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 16542544 - 16542505
Alignment:
Q  287 aaaatcttaagacaatgagtttataagtcctcctatttat 326  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  16542544 aaaatcttaaggcaatgagtttataagtcctcttatttat 16542505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 492
Target Start/End: Complemental strand, 17471675 - 17471544
Alignment:
Q  363 ccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgttt-acacaagaggtt 460  Q
    ||||| ||||||| |||  ||||| ||| | || |||| ||||||||| ||||| ||| |||||||| ||  |||||||| || ||| |||||||||| |    
T  17471675 ccggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggct 17471576  T
Q  461 atttccaagacttgaacctgtgacctttcagt 492  Q
     ||||  ||||||||||||||||| |||||||    
T  17471575 gtttctgagacttgaacctgtgacatttcagt 17471544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 416
Target Start/End: Complemental strand, 23488622 - 23488555
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt 416  Q
    ||||||||  ||||||||| |||||||||||| ||||||||| | || |||| |||||| ||||||||    
T  23488622 aataaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattt 23488555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 523
Target Start/End: Complemental strand, 35017837 - 35017783
Alignment:
Q  469 gacttgaacctgtgacctttca-gtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  35017837 gacttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgccaa 35017783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 24890530 - 24890472
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgta 427  Q
    ||||||||||| |||||||||| | || |||| |||||| ||||| |||||||||||||    
T  24890530 cactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgta 24890472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 34752754 - 34752820
Alignment:
Q  445 gtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    |||| ||||||||||| ||||||  |||||||   |||||||||||||||||||| ||||| |||||    
T  34752754 gtttccacaagaggttgtttccagaacttgaattcgtgacctttcagtcacatgataacaagtttac 34752820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 40762234 - 40762348
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| |||||||||||   |||||||| | ||  |||  ||||| ||||||||||||||||||||  | ||||| ||  || |||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacac 40762333  T
Q  453 aagaggttatttcca 467  Q
    |||||| | ||||||    
T  40762334 aagaggctgtttcca 40762348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 352 - 523
Target Start/End: Complemental strand, 46967 - 46796
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| |||||||| |||||| ||||||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaca 46868  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||| ||||||  ||||||||| ||||||||  |||||||||||||||||||||||  |||||||||    
T  46867 caagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaa 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 24771 - 24948
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||| | | |||||||||||  ||||||||| | |  |||| |||||| ||||||||||||| |||||| || ||||| ||| || ||||||    
T  24771 aaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttaca 24870  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | ||     ||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  24871 caagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 24948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 511
Target Start/End: Original strand, 46999 - 47041
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    |||||||||  |||||||||||||||| |||||||||||||||    
T  46999 gacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 21647095 - 21646918
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaaga 456  Q
    ||||||||| |||||||||||  ||||| ||  | ||||||| |||||| |||||||  |||| |||||||| || ||||| |||||| |||||||||||    
T  21647095 caacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaaga 21646996  T
Q  457 ggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    || | |||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  21646995 ggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 21646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 354 - 534
Target Start/End: Original strand, 6430627 - 6430806
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacaca 453  Q
    |||| ||||||||| | |||||||||  ||||||||| | || |||| | |||| |||||||||||||||||||| || ||||| ||| || ||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacaca 6430725  T
Q  454 agaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  6430726 agaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 6430806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 48598824 - 48599004
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  |||||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttaca 48598921  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  48598922 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 48599004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 5648394 - 5648213
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||||| || |||| ||||||  ||||||||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || ||||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttaca 5648296  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||| |||||    
T  5648295 caagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 5648213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 353 - 534
Target Start/End: Complemental strand, 20225117 - 20224938
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  ||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttacac 20225020  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  20225019 aagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 20224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 30639515 - 30639334
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||||| || |||||||||||  ||||| ||| | || |||| ||||||||||||||||||||||||||| || ||||| ||| || ||||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtt-tttaca 30639417  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||  | |||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||    
T  30639416 caagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttacccctc 30639334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 369 - 534
Target Start/End: Complemental strand, 37494970 - 37494805
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||||||||| |||||||||| | ||  | | |||||| ||||||||||| |||||||  |||||||| ||| || ||||||||||||||| ||||||     
T  37494970 cactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccag 37494871  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||| |||| |||||    
T  37494870 gacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttacccctc 37494805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 383 - 534
Target Start/End: Original strand, 5306694 - 5306844
Alignment:
Q  383 catacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtg 482  Q
    |||||||| | || |||| |||||| |||||||||||||||||||| |||||||| |||  | ||||||||||||| | |||||| |||||||||| |||    
T  5306694 catacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgat-tttacacaagaggctgtttccaggacttgaacccgtg 5306792  T
Q  483 acctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||| |||||    
T  5306793 acctttcagtcacatgacatcaactttaccagttgcgccaaggttacccctc 5306844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 47528529 - 47528709
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||   ||||  || | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  |||||    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttaca 47528626  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||    
T  47528627 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 47528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 372 - 537
Target Start/End: Complemental strand, 10660521 - 10660355
Alignment:
Q  372 taaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaag 469  Q
    ||||||||  ||||||||| | ||| ||| ||||||||||||||  ||||||||||||  || || || |||||| |||||| |||||||| |||||| |    
T  10660521 taaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagg 10660423  T
Q  470 acttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctccaa 537  Q
    |||||||| ||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  10660422 acttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctccaa 10660355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 372 - 537
Target Start/End: Complemental strand, 10874666 - 10874500
Alignment:
Q  372 taaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaag 469  Q
    ||||||||  ||||||||| | ||| ||| ||||||||||||||  ||||||||||||  || || || |||||| |||||| |||||||| |||||| |    
T  10874666 taaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagg 10874568  T
Q  470 acttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctccaa 537  Q
    |||||||| ||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  10874567 acttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctccaa 10874500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 349 - 512
Target Start/End: Complemental strand, 14983973 - 14983810
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||||| ||||  |||||||||||||||  ||||||||| | || |||| |||||| |||||||| ||||||||||  |||||||| |||||| |||    
T  14983973 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctatttttt 14983874  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||| | |||| |||||||||| | |||||||| || ||| |||||||||||||||||    
T  14983873 acacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttacc 14983810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 23501925 - 23501747
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  ||||| ||| | || |||| |||||| |||||||  ||||||||||||| |||||||| ||| || ||||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtttttta 23501826  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| | |      |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  23501825 cacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 23501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 350 - 528
Target Start/End: Complemental strand, 16911702 - 16911522
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgtt 447  Q
    |||||||| |||||||||| ||||||||||  || |||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| |||  | |     
T  16911702 ataaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttg 16911603  T
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||||||| | |||| | |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  16911602 tacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggtta 16911522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 35567306 - 35567145
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| || |||||| |||||||||||  ||| ||||| | |  |||| |||||| ||||||||||||| ||||||||| ||||| ||| || ||||||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttaca 35567207  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||| || | |||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  35567206 caagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttaccg 35567145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 372 - 508
Target Start/End: Original strand, 17043413 - 17043549
Alignment:
Q  372 taaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagac 471  Q
    ||||||||  ||||| ||| | ||||||| |||||| |||||||||||||||||||| || ||||| ||| |  ||||||||||||| | |||||| |||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggac 17043512  T
Q  472 ttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17043513 ttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 11054147 - 11054327
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||  | |||||||||||||||||| ||  |||| ||| ||  |||||    
T  11054147 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgtt--ttaca 11054244  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||  | ||| || |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  11054245 caagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 11054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 523
Target Start/End: Original strand, 16408600 - 16408773
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  ||||| ||  | || |||| |||||  |||||||  ||||||||||||| ||  |||| ||| || ||||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtttttta 16408699  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  16408700 cacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 16408773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 54967111 - 54966987
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| ||||||||||| |||||||  |||||||| ||| || ||||||||||||||| ||||||  |||||||| ||||||||||||||||||    
T  54967111 gggaaggggtcccaccatttggtatattgtag-caaccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcaca 54967013  T
Q  497 tgacaacaactttaccggttgcgccaa 523  Q
    |||||||||||||||| ||||||||||    
T  54967012 tgacaacaactttacc-gttgcgccaa 54966987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 369 - 505
Target Start/End: Original strand, 41018810 - 41018945
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||||||| | | |||||||||| ||||||| |||||| ||| ||||||||||||||||  | ||||| |||| | ||||||||||||||| ||||||     
T  41018810 cactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaat-tttacacaagaggttgtttccag 41018908  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaa 505  Q
    |||||||||| |||||||||||||||| |||||||||    
T  41018909 gacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 7385526 - 7385628
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| ||||||||||||||||| ||||||||||| |||||| |||||||| |||| | |||||| | |||||||| |||||||||||||||||||||||    
T  7385526 gggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgacaa 7385625  T
Q  503 caa 505  Q
    |||    
T  7385626 caa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 512
Target Start/End: Complemental strand, 19027973 - 19027824
Alignment:
Q  363 ccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttat 462  Q
    ||||| |||||||||||   ||||||||   ||||| | |||||| ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||| |    
T  19027973 ccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgt 19027874  T
Q  463 ttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||| ||||    
T  19027873 ttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacc 19027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 364 - 528
Target Start/End: Complemental strand, 54730376 - 54730209
Alignment:
Q  364 cggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt-acacaagaggtt 460  Q
    |||| |||||||||||  ||||||||| | || |||| |||||  || ||||  ||||||||| ||| || |||||||||||| ||| |||||||||| |    
T  54730376 cggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggct 54730277  T
Q  461 atttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
     |||| | |||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  54730276 gtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagtta 54730209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 446 - 528
Target Start/End: Original strand, 17315391 - 17315473
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||||||||||| |||| | || ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17315391 tttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 17315473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 354 - 512
Target Start/End: Complemental strand, 40915962 - 40915805
Alignment:
Q  354 aaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacaca 453  Q
    |||| ||| ||||| |||| ||||||  ||||||||| | || |||| ||| || |||||||||||||||||||| || ||||| | | || ||||||||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtt-tttacaca 40915864  T
Q  454 agaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||| | |||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  40915863 agaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttacc 40915805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 448 - 513
Target Start/End: Original strand, 487230 - 487295
Alignment:
Q  448 tacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  487230 tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccg 487295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 25463213 - 25463108
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| ||||||||||||| |||||| |||||||  ||  || ||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  25463213 gggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcaca 25463114  T
Q  497 tgacaa 502  Q
    ||||||    
T  25463113 tgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 42164241 - 42164317
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  42164241 tttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 512
Target Start/End: Complemental strand, 25343306 - 25343163
Alignment:
Q  371 ctaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    ||||||||||  |||||||| ||||| ||| ||||||  ||| |||  |||||||||||| || ||||| ||| || ||||||||||||  ||||||||     
T  25343306 ctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccag 25343207  T
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
     ||||||||||||||||| |||||||| ||||||||||||||||    
T  25343206 aacttgaacctgtgacctatcagtcacgtgacaacaactttacc 25343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 525
Target Start/End: Original strand, 47441574 - 47441701
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| ||||||  |||||||||||||||||||||| ||||| |||  | |||||| |||||  | ||||   |||||||||||||||||||||||||||     
T  47441574 gggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcacg 47441673  T
Q  497 tgacaacaactttaccggttgcgccaaag 525  Q
    |||||||||||||||| ||||||||||||    
T  47441674 tgacaacaactttacc-gttgcgccaaag 47441701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 352 - 510
Target Start/End: Original strand, 9832312 - 9832468
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| || || |||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| |  ||||||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--tttaca 9832409  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    ||||||| | ||| || |||||||||| ||||||||||||||| || ||||||| ||||    
T  9832410 caagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 418 - 513
Target Start/End: Original strand, 39029126 - 39029221
Alignment:
Q  418 gtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||||||||||| ||||| ||| || ||||||||||||| | |||||||| ||||||||| |||||||| ||||||| ||||||||||||||||    
T  39029126 gtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaacaactttaccg 39029221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 405 - 507
Target Start/End: Original strand, 39077848 - 39077948
Alignment:
Q  405 gtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaaca 504  Q
    ||||||||||||||| |||||||| |||||||| ||| ||  |||||||||||| | |||||| |||||||||| ||||||||||| |||||||||||||    
T  39077848 gtctcaccatttggtatattgtacgcaaccttaccctgtt--ttacacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaaca 39077945  T
Q  505 act 507  Q
    |||    
T  39077946 act 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 352 - 512
Target Start/End: Complemental strand, 47444093 - 47443929
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||||| || |||| |||||| |||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| || |||||     
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacg 47443994  T
Q  452 caagaggttatttccaagacttgaacctgtgacctt----tcagtcacatgacaacaactttacc 512  Q
    ||||||| | |||||| |||||||||| ||||||||    || ||||||||| ||||||||||||    
T  47443993 caagaggctgtttccaggacttgaacccgtgacctttcggtcggtcacatgagaacaactttacc 47443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 359 - 496
Target Start/End: Original strand, 29207904 - 29208039
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  ||||||||||||    
T  29207904 caacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttacacaagagg 29208001  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
      ||||||| |||||||||| |||||||||||||||||    
T  29208002 caatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 512
Target Start/End: Original strand, 44363130 - 44363291
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| ||||||||  ||||  |||||| || || || ||| || |||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttac 44363229  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||| |||| | ||| || |||||||||  |||||||||||||||||||||||||||||||||    
T  44363230 acacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 44363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 535
Target Start/End: Original strand, 55766466 - 55766648
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| || |||||| |||||||||||| ||||||||||| || |||| |||||  |||||||  ||||||||||| || ||||| ||| || |  ||||    
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgtt-tacacac 55766564  T
Q  453 aagaggttatttccaagacttgaacct-gtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcc 535  Q
    ||||   | ||||||| |||||||||  |||||||| | |||||||||||||||||||||| |||||| ||| |||| ||||||    
T  55766565 aagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttacccctcc 55766648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 362 - 476
Target Start/End: Original strand, 9987843 - 9987957
Alignment:
Q  362 cccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggtta 461  Q
    |||||| || ||||||||  ||||| ||||| ||  ||| |||||| |||||||||||||||||||  || ||||| ||||||||||||||||||||||     
T  9987843 cccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttg 9987942  T
Q  462 tttccaagacttgaa 476  Q
    |||||| ||||||||    
T  9987943 tttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 13256463 - 13256578
Alignment:
Q  415 ttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccgg 514  Q
    |||||||||||||| || ||||| ||| || |||||||||||||     |||| ||||||||||| ||||||| |||||||||||||||||||||||| |    
T  13256463 ttggtgtattgtacgcagccttaccctgttttttacacaagagg----ctccaggacttgaacctatgaccttccagtcacatgacaacaactttaccag 13256558  T
Q  515 ttgcgccaaagttatccctc 534  Q
    |||| |||| |||| |||||    
T  13256559 ttgcaccaaggttacccctc 13256578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 371 - 522
Target Start/End: Original strand, 49938611 - 49938759
Alignment:
Q  371 ctaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaag 469  Q
    |||||||||  ||||| ||| | | ||||| |||||| |||||||| ||||||||||||||   |||| ||  || ||||||||||||| | |||||| |    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtt-tttacacaagaggctgtttccagg 49938706  T
Q  470 acttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgcca 522  Q
    |||||||||||||||||||||||||| |||||||||||||  | |||||||||    
T  49938707 acttgaacctgtgacctttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 404 - 528
Target Start/End: Complemental strand, 14590922 - 14590797
Alignment:
Q  404 ggtctcaccatttggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    |||| ||||||||| |||||||||  || ||||| ||| || ||| | |||||||| | |||| | |||||||| | |||||||||||||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaa 14590823  T
Q  503 caactttaccggttgcgccaaagtta 528  Q
    |||||||||| |||||||||| ||||    
T  14590822 caactttaccagttgcgccaaggtta 14590797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 25629185 - 25629080
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| |||||||||||  ||||| | | | || |||| |||||| ||||||||||||||||||||||| ||||| |||||| ||||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttaca 25629086  T
Q  452 caagag 457  Q
    ||||||    
T  25629085 caagag 25629080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 523
Target Start/End: Original strand, 30581481 - 30581636
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttcc 466  Q
    ||||||||||| | |||| ||| | || |||| |||||| |||||||| ||||||||||||||| ||||| ||| || ||| |||||||||||| |||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttcc 30581580  T
Q  467 aagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    | ||||||||||  |||||||| ||| |  |||||||||||||| | ||||||||||    
T  30581581 acgacttgaacccttgaccttttagtgatgtgacaacaactttagc-gttgcgccaa 30581636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 510
Target Start/End: Original strand, 30690192 - 30690340
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcct-------attgtttacacaagaggtta 461  Q
    |||||||||||  ||||||||| | || |||| |||||| ||||| |||||||||||||  || ||||| |||       ||| ||||||||||||| |     
T  30690192 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttattttttacacaagaggctt 30690291  T
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||| |||||||||| |||||||||||||||| ||||||| ||||||    
T  30690292 tttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 411 - 523
Target Start/End: Original strand, 30496380 - 30496490
Alignment:
Q  411 ccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||||||||||||||  || ||||| ||   ||||||||||||||| | |||||| |||||||||  |||||||||||||||| |||||||||||||     
T  30496380 ccatttggtgtattgtatgcagccttacccg--tgtttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaactttt 30496477  T
Q  511 ccggttgcgccaa 523  Q
     | ||||||||||    
T  30496478 acagttgcgccaa 30496490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 510
Target Start/End: Original strand, 32478835 - 32478942
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| ||||||||||||||||     || ||||| ||| || ||||||| ||||||| |||||| |||||||||||||||||| || ||||||    
T  32478835 gggaaggggtcccaccatttggtgtatt-----cagccttaccctgtt-tttacactagaggttgtttccaggacttgaacctgtgacctctcggtcaca 32478928  T
Q  497 tgacaacaacttta 510  Q
    ||||||||||||||    
T  32478929 tgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  447 ttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||||||| |||||  |||||||||| |||||||||||||||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 54640432 - 54640508
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||| ||| ||||||||| |||||| ||||||||||    
T  54640432 tttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgccaa 54640508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 467
Target Start/End: Original strand, 20639657 - 20639773
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcacca-tttggtgtattgtacacaaccttatcctattgtttac 450  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| ||||| ||||||||||||||| || ||||| ||| || |||||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttac 20639756  T
Q  451 acaagaggttatttcca 467  Q
    |||||||| | ||||||    
T  20639757 acaagaggctgtttcca 20639773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 352 - 508
Target Start/End: Complemental strand, 54175201 - 54175043
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctggg-acggggtctcaccattt-ggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| || |||||| |||||||||||  ||||| ||| | || ||| | |||||| |||||||| |||||||||||| || ||||| ||| || ||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtt-ttta 54175103  T
Q  450 cacaagaggttattt-ccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    ||||||||| | ||| ||| |||||||| | ||||| |||||||||||||||||||||||    
T  54175102 cacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 535
Target Start/End: Original strand, 55830737 - 55830903
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaa 468  Q
    |||||||||||| ||||||||||| || |||| |||||  |||||||  ||||||||||| || | ||| ||| || |  |||||||||  | |||||||    
T  55830737 cactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgtt-tacacacaagagactgtttccaa 55830835  T
Q  469 gacttgaac-ctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcc 535  Q
     |||||||| | |||||||| |  ||||||||||||||||||||| |||||| ||| |||| ||||||    
T  55830836 aacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcgtcaaggttacccctcc 55830903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 528
Target Start/End: Original strand, 30352684 - 30352766
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||||||||| | |||||| ||||  |||| |||||||||| ||||| |||||||||||||||| |||||||||| ||||    
T  30352684 tttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggtta 30352766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 10380003 - 10380086
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacat 497  Q
    |||||||||||||||| |||  |||||||||| ||||||||||||||| |||  | |||||||||  ||||||||||||||||||    
T  10380003 atttggtgtattgtacgcaattttatcctatt-tttacacaagaggttgtttgtaggacttgaacaagtgacctttcagtcacat 10380086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 49938548 - 49938608
Alignment:
Q  463 ttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||  | ||||||||||    
T  49938548 ttccaagacttgaatctgtgacctttcagtcacgtgacaacaacttttaccgttgcgccaa 49938608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 523
Target Start/End: Complemental strand, 51420646 - 51420539
Alignment:
Q  416 tggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaa-cctgtgacctttcagtcacatgacaacaactttaccgg 514  Q
    ||||||||||||| || ||||| ||| || | ||||||||||||| |||||| |||||||| |   ||||||||||||||| |||||||||||| ||| |    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaatcaactgacctttcagtcacgtgacaacaacttcacc-g 51420548  T
Q  515 ttgcgccaa 523  Q
    |||||||||    
T  51420547 ttgcgccaa 51420539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 8473666 - 8473790
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| |||||||||||||||||||  || ||||| ||| ||    |||||||||| | |||||| |||||||||| |  ||||| | |||| |    
T  8473666 gggaaggggtcccaccatttggtgtattgtatgcagccttaccctgttaa--acacaagaggctgtttccaggacttgaacccgcaaccttccggtcata 8473763  T
Q  497 tgacaacaactttaccggttgcgccaa 523  Q
    |||||||||||||||| ||||||||||    
T  8473764 tgacaacaactttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 414 - 500
Target Start/End: Complemental strand, 7038126 - 7038041
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgac 500  Q
    |||||||||||||||  |  |||| |||||| ||||||||||| | | |||| | ||||||||||||||||||||||||||||||||    
T  7038126 tttggtgtattgtacgaagtcttaccctattttttacacaagaagctgtttc-aggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 369 - 513
Target Start/End: Original strand, 20908652 - 20908798
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||||||||  ||||||||| | |  |||| |||||| |||||||| |||||||||||| || ||||| | | || |||| | |||| | | ||||||    
T  20908652 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgtttcca 20908751  T
Q  468 agacttgaacctgtgaccttt-cagtcacatgacaacaactttaccg 513  Q
     ||||||||| ||| || ||| |||||||||||||||||||||||||    
T  20908752 tgacttgaacatgtaacattttcagtcacatgacaacaactttaccg 20908798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 511
Target Start/End: Original strand, 3580899 - 3580994
Alignment:
Q  412 catttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    |||||||||||||| ||||| ||||| | |  | |||||||||||||||   |||| |||||||||  ||||| ||||||||||||||||||||||||||    
T  3580899 catttggtgtattgcacacagccttaccatggtttttacacaagaggtt---tcca-gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 484
Target Start/End: Original strand, 10277756 - 10277886
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||| ||||| ||||| | |||  ||||| ||| | ||||||| ||||| ||||||||||||||||||||| || |||||||||||  |||| |    
T  10277756 aaaagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcctat--tttata 10277853  T
Q  452 caagaggttatttccaagacttgaacctgtgac 484  Q
    ||||||| | |||| | || ||||||| |||||    
T  10277854 caagaggctgtttcaaggatttgaacccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 480 - 537
Target Start/End: Complemental strand, 20405101 - 20405044
Alignment:
Q  480 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctccaa 537  Q
    |||||||| |||||||||||||||||||||||| |||||| ||| |||| ||||||||    
T  20405101 gtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttacccctccaa 20405044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 528
Target Start/End: Original strand, 5313113 - 5313169
Alignment:
Q  472 ttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||| |||||| ||||    
T  5313113 ttgaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggtta 5313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 510
Target Start/End: Original strand, 23580301 - 23580365
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    ||||||||||||| | |||| |  ||||||||| |||||||||||||||| ||||||||||||||    
T  23580301 tttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 472 - 533
Target Start/End: Original strand, 20373913 - 20373974
Alignment:
Q  472 ttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccct 533  Q
    |||||| |||||| ||||||||| |||| |||||||| ||| ||||||||||||||| ||||    
T  20373913 ttgaacatgtgacatttcagtcatatgagaacaacttgaccagttgcgccaaagttacccct 20373974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 36589785 - 36589710
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    ||||||||||||| | |||||| |||||||||||| ||| |||||||||  ||||| |||||||||| ||||||||||    
T  36589785 tttacacaagaggctgtttccaggacttgaacctg-gacgtttcagtcatgtgacatcaactttacc-gttgcgccaa 36589710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 7909325 - 7909384
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagag 457  Q
    |||| |||||| |||||||||||||||||||| |||||||| ||| || ||||||||||||    
T  7909325 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtt-tttacacaagag 7909384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 458
Target Start/End: Original strand, 51865048 - 51865143
Alignment:
Q  363 ccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||| || ||||||||  ||||||||| | || |||| |||| | |||||||||||||||||||| || ||||| | | || |||||||||||||    
T  51865048 ccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaagagg 51865143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 512
Target Start/End: Complemental strand, 11579870 - 11579820
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||||| ||||| || | ||||| |||||||||||||||||||||    
T  11579870 tttccaagacttaaacctatgccatttcaatcacatgacaacaactttacc 11579820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 415
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt 415  Q
    ||||| ||||||||| ||||||||||| |||||||||| | || |||| |||||| |||||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 512
Target Start/End: Complemental strand, 41549424 - 41549358
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||||| ||||||  ||||||||| ||||| ||||| |||  || |||||||||||||    
T  41549424 tttacacaagaggttgtttccagaacttgaacccgtgacatttcaatcatgtgtcaacaactttacc 41549358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 50856352 - 50856405
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||||||| ||||||||||| |||  |||||||||||||||| ||||||||||    
T  50856352 gacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgccaa 50856405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 513
Target Start/End: Original strand, 12257712 - 12257753
Alignment:
Q  472 ttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||| ||||||||||| |||| |||||||||||||||||    
T  12257712 ttgaacccgtgacctttcaatcacgtgacaacaactttaccg 12257753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Complemental strand, 18969738 - 18969701
Alignment:
Q  491 gtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggtta 18969701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 503
Target Start/End: Original strand, 32629366 - 32629418
Alignment:
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaac 503  Q
    |||||||| | |||| | || ||||||| ||||||||||||||||||||||||    
T  32629366 acaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 38786745 - 38786673
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtatt 424  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| ||||||||||||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 7e-41; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 342 - 534
Target Start/End: Original strand, 1354746 - 1354936
Alignment:
Q  342 ttcttctaataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcct 441  Q
    |||||| | ||||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| |||    
T  1354746 ttcttcaattaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 1354845  T
Q  442 attgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
     ||  |||||||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  1354846 gtt--ttacacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1354936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 352 - 523
Target Start/End: Original strand, 12221913 - 12222087
Alignment:
Q  352 aaaaggacaacccggtacactaaa-gctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttt 448  Q
    |||||| ||||||||| ||||||| ||||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| || |||    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 12222012  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  12222013 acacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 12222087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 352 - 536
Target Start/End: Complemental strand, 1347098 - 1346916
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| ||  |||||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--ttaca 1347001  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcca 536  Q
    |||| || | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  1347000 caagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcca 1346916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 352 - 534
Target Start/End: Original strand, 29355854 - 29356039
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  ||||||||| | || |||| |||||| |||||||  ||||||||||||| || ||||| ||| ||  |||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctta 29355953  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaa-ctttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| | |||||| |||||||||| ||||||||||||||||||||||||||  |||||| |||| ||||| |||| |||||    
T  29355954 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttacccctc 29356039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 352 - 520
Target Start/End: Original strand, 2166409 - 2166579
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  | |||   | | || |||| |||||| |||||||  ||||||||||||| |||||||||||| |  ||||    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatttta 2166508  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgc 520  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||| |||||||||||||  |||||||    
T  2166509 cacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 352 - 520
Target Start/End: Original strand, 2178042 - 2178212
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||||||| |||||||||||  | |||   | | || |||| |||||| |||||||  ||||||||||||| |||||||||||| |  ||||    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatttta 2178141  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgc 520  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||| |||||||||||||  |||||||    
T  2178142 cacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2178212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 9161260 - 9161077
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatt--tggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||| ||||| ||| ||||||||||   ||||||||| | || | || |||||| |||||||  || |||||||||| || |||||  || || ||||    
T  9161260 aaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtt-ttta 9161162  T
Q  450 cacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| |||||    
T  9161161 cacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttacccctc 9161077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 14553585 - 14553477
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    ||||||||||| |||||| ||||| |||||| ||||||||||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||||     
T  14553585 tttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt-agtcacatgacaacaactttacca 14553487  T
Q  514 gttgcgccaa 523  Q
    ||||| ||||    
T  14553486 gttgcaccaa 14553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 14975173 - 14975261
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||| | |||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  14975173 tttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttatccctc 14975261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 352 - 534
Target Start/End: Complemental strand, 1941991 - 1941809
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| |||| |||| ||| ||| |||  |||||| |||||||  ||| |||||| ||||||| |||||||||||| || ||||| ||| || ||||||    
T  1941991 aaaagggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgttttttaca 1941892  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||| ||| || ||||| || | | |||||| |||||| ||||||||||||||||| ||||| |||| |||| |||||    
T  1941891 caagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaacaactttaccagttgcaccaaggttacccctc 1941809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 413 - 511
Target Start/End: Original strand, 32728216 - 32728314
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttac 511  Q
    ||||||| |||||||||||  |||| ||| || |||||| |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  32728216 atttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 403 - 528
Target Start/End: Original strand, 3815127 - 3815252
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    ||||| |||||||||||||||||||| ||  | || | |||| ||||||||| ||  | |||||| |||||||||| ||||| |||||||||||||||||    
T  3815127 gggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaa 3815226  T
Q  503 caactttaccggttgcgccaaagtta 528  Q
    |||||||||| |||||||||| ||||    
T  3815227 caactttaccagttgcgccaaggtta 3815252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 352 - 503
Target Start/End: Original strand, 18277192 - 18277343
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||||||||||||| || ||||||||  ||||||| |   ||| ||| |||||| |||||||||||||  ||||| |||||||| |||  | ||||||    
T  18277192 aaaaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttaca 18277291  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaac 503  Q
    ||||||| | ||||||||| ||||||| ||||||||| ||||||| ||||||    
T  18277292 caagaggctgtttccaagatttgaacccgtgaccttttagtcacaggacaac 18277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 534
Target Start/End: Complemental strand, 8409311 - 8409197
Alignment:
Q  420 gtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcg 519  Q
    ||||||||| || ||||| ||| || |||||||||||||   |||||| |||||||| | |||||||||||||||||| |||||||||||||| ||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcg 8409212  T
Q  520 ccaaagttatccctc 534  Q
    |||| |||| |||||    
T  8409211 ccaaggttacccctc 8409197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 13905035 - 13905148
Alignment:
Q  409 caccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactt 508  Q
    |||||||||||| ||||||  || ||||| ||| || ||||||||||||||  ||| || ||||||| || |||||||||||||||||||||||||||||    
T  13905035 caccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaactt 13905134  T
Q  509 taccggttgcgccaa 523  Q
    |||| ||||||||||    
T  13905135 tacc-gttgcgccaa 13905148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 369 - 510
Target Start/End: Complemental strand, 32068213 - 32068074
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||| ||||| |||||||||| |||    | |||||| |||||||| ||||||||||| ||| | ||||||| || |||||||||||||||   ||||    
T  32068213 cactaacgctctagcatacgcaaaatccaaaaaggggtcccaccattttggtgtattgtaaacagcattatcctgttttttacacaagaggtt---tcca 32068117  T
Q  468 agacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||    
T  32068116 agacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 413 - 528
Target Start/End: Complemental strand, 20400742 - 20400627
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||| ||||| ||||| ||  |||| ||| || |||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  20400742 atttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactatacc 20400643  T
Q  513 ggttgcgccaaagtta 528  Q
      ||||||||| ||||    
T  20400642 aattgcgccaaggtta 20400627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 446 - 528
Target Start/End: Complemental strand, 24734675 - 24734593
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||||||||||| |||| | || |||||| | |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  24734675 tttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgccaatgtta 24734593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 469 - 534
Target Start/End: Original strand, 33922944 - 33923009
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  33922944 gacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttacccctc 33923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 369 - 523
Target Start/End: Original strand, 7947387 - 7947541
Alignment:
Q  369 cactaaagctcttgcatacgcaagatctgggacggggtctcaccattt-ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttcca 467  Q
    |||||||||||   |||||||||| || |||| |||| | |||||||| |||||||||||| || ||||| |||  | |||||||| |||||| ||||||    
T  7947387 cactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttcca 7947486  T
Q  468 agacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
     || ||||||| ||||||||||||||||   ||| |||||||||| ||||||||||    
T  7947487 ggagttgaaccggtgacctttcagtcacgcaacaccaactttacc-gttgcgccaa 7947541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 414 - 512
Target Start/End: Original strand, 2755485 - 2755583
Alignment:
Q  414 tttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||||| || ||||| |||||| ||   | |||||| | ||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  2755485 tttggtgtattgtacgcagccttagcctatttttggtataagaggatgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 513
Target Start/End: Complemental strand, 12889497 - 12889401
Alignment:
Q  417 ggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccg 513  Q
    |||||||||||  || ||||  ||| || || |||||||||| | ||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  12889497 ggtgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttaccg 12889401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 496
Target Start/End: Complemental strand, 17432483 - 17432332
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttg--gtgtattgtacacaaccttatccta------tt 444  Q
    ||||| ||||||||| |||||||||||  |||| | || |||| ||||   |||||||||||||   |||||||||||||| ||||| |||       ||    
T  17432483 aaagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgtt 17432384  T
Q  445 gtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
     ||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  17432383 ttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 510
Target Start/End: Complemental strand, 22967225 - 22967149
Alignment:
Q  433 ccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||||||||| ||||||||||| ||| |||||| |||||||||  |||||||| |||||||||||||| |||||||    
T  22967225 ccttatcctatt-tttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataacttta 22967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 23240873 - 23240971
Alignment:
Q  402 ggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgaca 501  Q
    |||||| ||||| ||||| |||||||| ||| |||| ||| ||  |||||||||||| | |||||| |||||| |||||||||||||||||||| |||||    
T  23240873 ggggtcccaccaattggtatattgtacgcaaacttaccctgtt--ttacacaagaggctgtttccaggacttgcacctgtgacctttcagtcacgtgaca 23240970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 510
Target Start/End: Original strand, 23821168 - 23821244
Alignment:
Q  433 ccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||||||||| ||||||||||| ||| |||||| |||||||||  |||||||| |||||||||||||| |||||||    
T  23821168 ccttatcctatt-tttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataacttta 23821244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 536
Target Start/End: Original strand, 15866083 - 15866220
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcaca 496  Q
    |||| |||||| ||||||||||||||||  || || | ||| ||| || |||||  |||||| | |||||| || |||||||  |||||||||| |||||    
T  15866083 gggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcaca 15866180  T
Q  497 tgacaacaactttaccggttgcgccaaagttatccctcca 536  Q
    || ||||||||||||| |||| ||||| |||| |||||||    
T  15866181 tgccaacaactttaccagttgggccaaggttacccctcca 15866220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 510
Target Start/End: Complemental strand, 28007717 - 28007604
Alignment:
Q  397 gggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacc-tttca-gtca 494  Q
    |||| |||||| || ||||||||||||||||| || ||| | ||| ||  |||||||||||| | |||||| |||||||||| |||||| ||||| ||||    
T  28007717 gggaaggggtcccagcatttggtgtattgtacgcagcctgaccctgtt--ttacacaagaggctctttccaggacttgaacccgtgaccttttcatgtca 28007620  T
Q  495 catgacaacaacttta 510  Q
    ||||||||||||||||    
T  28007619 catgacaacaacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 534
Target Start/End: Complemental strand, 6024306 - 6024187
Alignment:
Q  415 ttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccgg 514  Q
    |||||||||||||| ||  |||| | | || ||||||||||||| | |||| | || ||||| | |||||||| || ||||||||||||||||||||| |    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccag 6024207  T
Q  515 ttgcgccaaagttatccctc 534  Q
    ||||| |||| ||| |||||    
T  6024206 ttgcgtcaaaattacccctc 6024187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 528
Target Start/End: Complemental strand, 12063509 - 12063427
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||| |||||||| |||||| | |||||||||| |||||||||||||| ||||| |||||||||| | ||||| |||| ||||    
T  12063509 tttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggtta 12063427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 522
Target Start/End: Original strand, 3116216 - 3116299
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtc-------acatgacaacaactttaccggttgcgcca 522  Q
    |||| |||||||||| |||||| ||||||||||  |||||||||||||       |||||||||||||||||||||||||||||    
T  3116216 tttatacaagaggttgtttccatgacttgaacccatgacctttcagtcgcaactcacatgacaacaactttaccggttgcgcca 3116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 528
Target Start/End: Original strand, 23930124 - 23930301
Alignment:
Q  350 ataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttta 449  Q
    |||||||| |||| |||| |||||||||||  ||||| ||| | || | || |||||| |||||| ||||||||||||| ||||  |||| | || ||||    
T  23930124 ataaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgcaac--tatcttgtttttta 23930221  T
Q  450 cacaagaggttatttccaagactt-gaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||| |||  | |||||| ||||| ||||  ||||||||| || |||||||||||| |||||   |||||||||| ||||    
T  23930222 cacatgagactgtttccatgacttggaactcgtgacctttgagacacatgacaacatctttatgagttgcgccaaggtta 23930301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 477
Target Start/End: Complemental strand, 12228450 - 12228369
Alignment:
Q  396 tgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaac 477  Q
    ||||| |||||| ||| || ||||||||||||| |||| |||||||||| |||| |||||||  | ||||||| ||||||||    
T  12228450 tgggaaggggtcccactatctggtgtattgtacgcaactttatcctattttttaaacaagagtctgtttccaaaacttgaac 12228369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 8417498 - 8417442
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgc 518  Q
    |||||| ||| |||||  ||||| ||||||||||||||||||||||||||| |||||    
T  8417498 tttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 483
Target Start/End: Complemental strand, 33138918 - 33138838
Alignment:
Q  403 gggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtga 483  Q
    ||||| |||||||||||||||||||| |  |||||  || || |||| |||||||||| |||||| |||||||||| ||||    
T  33138918 gggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 523
Target Start/End: Original strand, 19649294 - 19649337
Alignment:
Q  480 gtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||| |||||||||||||||||||||||||| | ||||||||||    
T  19649294 gtgatctttcagtcacatgacaacaactttatcagttgcgccaa 19649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 416
Target Start/End: Complemental strand, 12886050 - 12885985
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt 416  Q
    ||||||| ||||||||| |||||||||||   |||||||| | ||||||| |||||| ||||||||    
T  12886050 taaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattt 12885985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Complemental strand, 13267861 - 13267788
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattg 425  Q
    |||||| ||||||||| |||| ||||||  ||||||||| | ||  ||| |||||| |||||||||||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 467
Target Start/End: Complemental strand, 26097294 - 26097181
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |  ||||||||||||||||| || ||||| ||| |  ||||||    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgt--tttaca 26097197  T
Q  452 caagaggttatttcca 467  Q
    ||||||| | ||||||    
T  26097196 caagaggctgtttcca 26097181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 352 - 528
Target Start/End: Original strand, 13023 - 13198
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||||||| |  ||||||||| | ||||||| |||||| ||||||| |||||||||||| || ||||| | | || |||||     
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtt-tttacg 13121  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    ||||||| | |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13122 caagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 13198  T

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Target: scaffold0168 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 352 - 535
Target Start/End: Complemental strand, 30713 - 30532
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttaca 451  Q
    |||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || || || ||| ||  |||||    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgtt--ttaca 30616  T
Q  452 caagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctcc 535  Q
    ||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  30615 caagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcc 30532  T

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Target: scaffold0254 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 415 - 520
Target Start/End: Complemental strand, 4230 - 4125
Alignment:
Q  415 ttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccgg 514  Q
    |||||||||||||| |||||||||||| |  ||||||||||||||| |||||| |||||||||| |||||||||||||||||| |||||||||||||  |    
T  4230 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactag 4131  T
Q  515 ttgcgc 520  Q
    ||||||    
T  4130 ttgcgc 4125  T

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Target: scaffold1176 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 512
Target Start/End: Original strand, 1584 - 1744
Alignment:
Q  349 aataaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt 448  Q
    ||||||||| ||||| ||| |||||||||||  ||||||||  | || |||| |||||| || ||||||||||||||||  || ||||||||| ||  ||    
T  1584 aataaaagg-caacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgtt--tt 1680  T
Q  449 acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    |||||||||||| ||| || ||||||||||  ||||||||||||||||||||||||||||||||    
T  1681 acacaagaggttgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttacc 1744  T

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Target: scaffold0311 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 359 - 523
Target Start/End: Complemental strand, 10939 - 10775
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    |||||| || |||||||||||  ||||||||| | || |||| |||||| ||||||||||||||||| || || || || ||| || |||||||||||||    
T  10939 caacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagagg 10840  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    || ||| ||   |||||||| |||||||| |||||||||||||||||||||||| ||||| ||||    
T  10839 ttgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaa 10775  T

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Target: scaffold0187 (Bit Score: 63; Significance: 4e-27; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 528
Target Start/End: Original strand, 10056 - 10223
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||||||| ||||  ||||| |||||| ||| | || |||| |||||| ||| |||||||||||||||| ||  ||||  || ||  ||||||||||||    
T  10056 caacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgtt--ttacacaagagg 10153  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
     | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  10154 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 10223  T

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Target: scaffold0187; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 528
Target Start/End: Original strand, 20384 - 20551
Alignment:
Q  359 caacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagagg 458  Q
    ||||||||| ||||  ||||| |||||| ||| | || |||| |||||| ||| |||||||||||||||| ||  ||||  || ||  ||||||||||||    
T  20384 caacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgtt--ttacacaagagg 20481  T
Q  459 ttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
     | |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  20482 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 20551  T

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Target: scaffold0187; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 469 - 534
Target Start/End: Complemental strand, 8964 - 8899
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctc 8899  T

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Target: scaffold0187; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 469 - 534
Target Start/End: Complemental strand, 19292 - 19227
Alignment:
Q  469 gacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctc 19227  T

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Target: scaffold0049 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 353 - 528
Target Start/End: Complemental strand, 59114 - 58937
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccattt--ggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||| ||||||| | |||||||||||  |||||||||   ||||||| |||||| ||||||||  |||||||||||| ||  |||| ||| || ||||     
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttat 59015  T
Q  451 acaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagtta 528  Q
    |||||||| | |||||| |||||||||| ||||||||||||||||||||||| || |||||| ||||| |||| ||||    
T  59014 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggtta 58937  T

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Target: scaffold0024 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 462 - 534
Target Start/End: Complemental strand, 83901 - 83829
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaaagttatccctc 534  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  83901 tttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttacccctc 83829  T

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Target: scaffold0223 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 523
Target Start/End: Complemental strand, 11264 - 11097
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||| ||| ||||| |||||  ||||| ||| | || |||| || ||| |||||||||||||||||||  || |||||  || |  |||||||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagcctta--ctttgttttacac 11167  T
Q  453 aagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||| | |||||| |||||||||| |||||||||||||||||| | |||||||||||| ||||||||||    
T  11166 aagaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaa 11097  T

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Target: scaffold0036 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 535
Target Start/End: Original strand, 35048 - 35201
Alignment:
Q  384 atacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttccaagacttgaacctgtg 482  Q
    ||||||||||||  |||  ||||| |||||||||||||||||||| || ||||| ||| || |   |||||||||  | ||| || |||||||||| |||    
T  35048 atacgcaagatccaggaaagggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtg 35147  T
Q  483 acctttcagtcacatgacaa-caactttaccggttgcgccaaagttatccctcc 535  Q
    ||||| ||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  35148 accttacagtcacatgacaataaactttaccagttgcaccaaagttatccctcc 35201  T

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Target: scaffold0005 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 404 - 528
Target Start/End: Original strand, 226456 - 226581
Alignment:
Q  404 ggtctcaccatttggtgtattgtacacaaccttatcctattgttt-acacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaa 502  Q
    |||| ||||||||| |||||||||  || ||||| ||| || ||| | |||||||| | |||| | |||||||| | |||||||||||||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaa 226555  T
Q  503 caactttaccggttgcgccaaagtta 528  Q
    |||||||||| |||||||||| ||||    
T  226556 caactttaccagttgcgccaaggtta 226581  T

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Target: scaffold0116 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 446 - 512
Target Start/End: Complemental strand, 8933 - 8867
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||| ||| |||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  8933 tttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacc 8867  T

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Target: scaffold0167 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 23704 - 23569
Alignment:
Q  383 catacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtg 482  Q
    ||||| |||| ||||||| |||||| ||||||||| |  ||||||| || ||| | ||| || ||||||||||||||| ||| ||||||||||||| ||     
T  23704 catactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgta 23605  T
Q  483 acctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
     ||||||||||||||    ||||||||||| ||||||||||    
T  23604 ccctttcagtcacat----acaactttacc-gttgcgccaa 23569  T

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Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 478
Target Start/End: Original strand, 48632 - 48757
Alignment:
Q  351 taaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttac 450  Q
    ||||||| ||||||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || ||||| ||| |  |||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--tttac 48729  T
Q  451 acaagaggttatttccaagacttgaacc 478  Q
    |||||||| | ||||||  |||||||||    
T  48730 acaagaggctgtttccaccacttgaacc 48757  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 520
Target Start/End: Complemental strand, 43171 - 43097
Alignment:
Q  446 tttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgc 520  Q
    ||||||||||||| | |||| | ||| |||||  ||||||||||| ||||||||||| ||||||||| |||||||    
T  43171 tttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgc 43097  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 353 - 523
Target Start/End: Original strand, 72867 - 73031
Alignment:
Q  353 aaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaaccttatcctattgtttacac 452  Q
    ||||| ||||| ||| |||||||||||  ||||||||| | || |||| |||||   ||||||||||||||||||  || ||||| | | || |||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacac 72966  T
Q  453 aagag-gttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 523  Q
    |||||  || |||| | |||||||||| |||||        |||||||||||||||||||| ||||||||||    
T  72967 aagagacttgtttctaggacttgaacccgtgac-------acacatgacaacaactttaccagttgcgccaa 73031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 24690 - 24642
Alignment:
Q  462 tttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 510  Q
    |||||| |||||||||| |||||||| ||||||| ||||||||||||||    
T  24690 tttccaggacttgaacccgtgaccttacagtcacttgacaacaacttta 24642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 24132 - 24217
Alignment:
Q  352 aaaaggacaacccggtacactaaagctcttgcatacgcaagatctgggacggggtctcaccatttggtgtattgtacacaacctta 437  Q
    |||||| ||| ||||| ||||| |||||  ||||| ||| | || |||| |||||| |||||||||||||||||||| || |||||    
T  24132 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctta 24217  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 33005 - 32905
Alignment:
Q  413 atttggtgtattgtacacaaccttatcctattgtttacacaagaggttatttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 512  Q
    ||||||||||||||| |||  ||||  || || |||||| |||||||| ||||   ||||||||||  |||||||| |||||| || |||||||| ||||    
T  33005 atttggtgtattgtatacagtcttactctgttttttacagaagaggttttttcgcggacttgaacccatgacctttaagtcacgtggcaacaactatacc 32906  T
Q  513 g 513  Q
    |    
T  32905 g 32905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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