View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2710R-Insertion-25 (Length: 334)

Name: NF2710R-Insertion-25
Description: NF2710R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2710R-Insertion-25
NF2710R-Insertion-25
[»] chr5 (1 HSPs)
chr5 (9-334)||(29220333-29220658)


Alignment Details
Target: chr5 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 9 - 334
Target Start/End: Original strand, 29220333 - 29220658
Alignment:
Q  9 aatctccctatcacaactttggtccaaccaacctactataggtttgggcccttgttttcacttagagcacatatggctgaagcaaggctaggttctagtg 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29220333 aatctccctatcacaactttggtccaaccaacctactataggtttgagcccttgttttcacttagagcacatatggctgaagcaaggctaggttctagtg 29220432  T
Q  109 attcattcactaaacattgcatgacggtgattcgagaacattacttgaaggtgtatacgtcgtcttcgaagtggtccacgactcaaattattggccccgg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |    
T  29220433 attcattcactaaacattgcatgacggtgattcgagaacattacttgaaggtgtatacgtcgtctttgaagtggtccacgactcaaattattggcccgag 29220532  T
Q  209 tataaaggtttgtcaatatgccacaatccaaccatgtgaaggttaaagaaagatttcccaaacaatactcgcattacgattgaaatggacgccttagaaa 308  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29220533 tataaaggtttgtcaatatgccacaatccaaccatgcgaaggttaaagaaagatttcccaaacaatagtcgcattacgattgaaatggacgccttagaaa 29220632  T
Q  309 aacagtcaagataaatatgaactgtg 334  Q
    |||||| |||||||||||||||||||    
T  29220633 aacagttaagataaatatgaactgtg 29220658  T

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