View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2710_high_26 (Length: 248)
Name: NF2710_high_26
Description: NF2710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2710_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 43936961 - 43936720
Alignment:
| Q |
1 |
atgctcccgatgataaaacagcggaggtgacagaaccgaaaatatccaacgggaaatcagaagagacgacaaagaaaaagccaggtttatttttctcaat |
100 |
Q |
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| T |
43936961 |
atgctcccgatgataaaacagcggaggtgacagaaccgaaaatatccaacgggaaatcagaagagacgacaaagaaaaagccaggtttatttttctcaat |
43936862 |
T |
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| Q |
101 |
attttctttagaagactattagtgacacctgtgatgcagatgttacgagaaaacactgttttttgttttgaatgcatgatggcattgccatgacaacttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43936861 |
attttctttagaagactattagtgacacctgtgatgtagatgttacgagaaaacactgttttttgttttgaatgcatgatggcattgccatgacaacttt |
43936762 |
T |
|
| Q |
201 |
ctttctgaaaataatataagaattaagcttcgatctctgctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
43936761 |
ctttctgaaaataatataagaattaagcttcgatctctgctc |
43936720 |
T |
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