View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2710_low_16 (Length: 357)
Name: NF2710_low_16
Description: NF2710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2710_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 18 - 319
Target Start/End: Original strand, 1240855 - 1241156
Alignment:
| Q |
18 |
acaaatagggttgtgaagagaggaacaatgaaagtaaggaagatgaaggaaacataagaaatgagttttccaacacaagatgagtgatcaagagcacacc |
117 |
Q |
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| T |
1240855 |
acaaatagggttgtgaagagaggaacaacgaaagtaaggaagatgaaggaaacataagaaatgagttttccaacacaagatgagtgatcaagagcacacc |
1240954 |
T |
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| Q |
118 |
atttaagacatatccgaaagtttcttagttcatcaaagatcatggattttgatcttgcataagatggttgaagtaacaaaggaacattgtgttggtgctg |
217 |
Q |
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| T |
1240955 |
atttaagacatatccgaaagtttcttagttcatcaaagatcatggattttgatcttgcataagatggctgaagtaacaaaggaacattgtgttggtgctg |
1241054 |
T |
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| Q |
218 |
ttgctgttggtcagagaaagatactcttttggaagatgaattatcaatgtcaatggctgtgtccttggttgattctgttgaaggtttcatattgagtttt |
317 |
Q |
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| T |
1241055 |
ttgctgttggtcagagaaagatactcttttggaagatgaattatcaatgtcaatggttgtgtccttggttgattctgttgaaggtttcatattgagtttt |
1241154 |
T |
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| Q |
318 |
tt |
319 |
Q |
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| T |
1241155 |
tt |
1241156 |
T |
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