View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2711_high_30 (Length: 286)
Name: NF2711_high_30
Description: NF2711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2711_high_30 |
 | |
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| [»] chr3 (29 HSPs) |
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|
| [»] scaffold2156 (1 HSPs) |
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| [»] scaffold0640 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 286
Target Start/End: Original strand, 17727798 - 17728066
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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|
| T |
17727798 |
ggtgagattaaaaaatccaccagg-aagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatactcaatagatgga |
17727896 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
17727897 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcaatacttgaagccaatttgtttccttatgaagat |
17727996 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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|
| T |
17727997 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaagccaatgaagactatccatgtgcag |
17728066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 286
Target Start/End: Original strand, 19029027 - 19029295
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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|
| T |
19029027 |
ggtgagattaaaaaatccaccagg-aagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatactcaatagatgga |
19029125 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
19029126 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcaatacttgaagccaatttgtttccttatgaagat |
19029225 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19029226 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaagccaatgaagactatccatgtgcag |
19029295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 18144124 - 18143862
Alignment:
| Q |
18 |
gtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggat |
117 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||| | ||| ||||||| ||||||||||||||| |||||||||||||| | ||| |||| | |
|
|
| T |
18144124 |
gtgagattaaaaaacctatcaggtaaatgagaggtgaagttgtttaaagaaagatcaagagttacaattgacgacaaattcaaatacttgatatatgggt |
18144025 |
T |
|
| Q |
118 |
tgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatc |
217 |
Q |
| |
|
|||||| |||||||| ||||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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|
| T |
18144024 |
tgatcattaagttgttcaggttacaagaactcaactgtaattctaatagtgaaggaagtgtattcactatttgaagccaattggtttccttatgaagatc |
18143925 |
T |
|
| Q |
218 |
aattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccat |
280 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
18143924 |
aattccactgaggttgagatattttaaggaagaaagtggagaaagccaatcaagattatccat |
18143862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 19380775 - 19380516
Alignment:
| Q |
18 |
gtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggat |
117 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||| | ||| ||||||| |||||||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
19380775 |
gtgagattaaacaacccatctggtaagtgagaggtgaagttgtttccagaaagatggagagttacaagtgaagacaaattcaaatactcaacagatgg-- |
19380678 |
T |
|
| Q |
118 |
tgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatc |
217 |
Q |
| |
|
||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
19380677 |
-------gaagttgttcaggttacaatgactcaactgtaattctaatagtgaaggaagtgtattcactacttgaaaccaattattttccttatgaagata |
19380585 |
T |
|
| Q |
218 |
aattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||| |
|
|
| T |
19380584 |
aattccatcgaggttgagatattttaaggaagaaagtggagaaagccaatcaagattatccatgtgcag |
19380516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 18165039 - 18164776
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||| | || ||||| |
|
|
| T |
18165039 |
ggtgagattaaaaaatccatcaagtaagtgagaggtgaaatagttgtaagaaagatcaagagttacaattgaagacaaattcacatacttaaaagatgtt |
18164940 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
|| | ||||||||| |||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
18164939 |
ccaattatgaagttgttcaggttgcaattactcaactgtaattctaatagtgaaggaagtgtactcactgcttgaatccaattggtttccttatgaagat |
18164840 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccat |
280 |
Q |
| |
|
|||| | | ||||||||||||| ||||||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
18164839 |
caataaaactaaggttgagatatttcaaggaagaaagtggagaaagccaatcaagattatccat |
18164776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 19436913 - 19436731
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| ||||| | |||||||||| |
|
|
| T |
19436913 |
ggtgagattaaaaaacccatccggtaagtgagaggtgaaatcgttatctgaaagataaagagttacaagtgaagacaaatttaaatactgaatagatgga |
19436814 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaatt |
199 |
Q |
| |
|
|| |||| ||||||||| ||| ||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
19436813 |
ttaatcacgaagttgttcaggctgcacccactcaactttaattctaatagtgaaggaagtgaattcactatttgaagccaatt |
19436731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 286
Target Start/End: Complemental strand, 19399591 - 19399331
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||| |||||||||||||||||||| ||| ||||||| | |||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| |
|
|
| T |
19399591 |
ggtgaaattaaaaaacccatcaggtatatgaaaggtgaagttgttgtttgaaagatcaagagttacaagtgaagacaaattcaaatactcaagagatgga |
19399492 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||| |||| ||| ||||||||| | |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
19399491 |
---------aagttgttcaggttacatgcactcaactgtaattcaaacaatgacggaagtgtacttactacttgaaaccagttggtttccttatgaagat |
19399401 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
|||| | ||| ||||||||||||| |||||||||||||||||||| ||||| |||| ||||||| ||||| |
|
|
| T |
19399400 |
caatccaattaaggttgagatattttaaggaagaaagtggagaaagccaatcaagattatccatttgcag |
19399331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 14 - 286
Target Start/End: Complemental strand, 18103316 - 18103053
Alignment:
| Q |
14 |
ataggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagat |
113 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||| | ||||||| ||| | |||||||| ||| |||||||||||| ||||||||||||| |||| ||| |
|
|
| T |
18103316 |
ataggtgagattaaaaaacccatcatgtaaatgaaaagtgaaattgttttctgaaagatcaagggttacaattgaatacaaattcaaatactcaactgat |
18103217 |
T |
|
| Q |
114 |
ggattgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaa |
213 |
Q |
| |
|
|| ||||||||| ||||| || |||||||||||||||||||| ||||||||||||| | |||||||||| ||| |||||||||||||||| |
|
|
| T |
18103216 |
gg---------gaagttgttcaggttacaataactcaactgtaattctaacaatgaaggaagtgtacttactacttgaaaccagttggtttccttatgaa |
18103126 |
T |
|
| Q |
214 |
gatcaattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
||||||| | | | ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
18103125 |
gatcaatccaactaaggttgagatattttaaggaagaaagtggagaaagccagtgaagactatccatgtgcag |
18103053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 19461415 - 19461158
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||| | |||||||||||||||| |||| |||||| |
|
|
| T |
19461415 |
ggtgagattaaaaaacccatcaggtaaatgagaggtgaaattgtttaaagaaagatcaagagttacaagtaaagacaaattcaaatactcaacagatgg- |
19461317 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
19461316 |
--------gaaattgttcaggttacaatgactcaactgtaattctaatagtgaaggaagtgtattcactatttgaagccaattggtttccttatgaagat |
19461225 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
||||||| | |||| |||||||| ||||||||| ||||||||| |||| |||| |||||||||| |
|
|
| T |
19461224 |
gaattccactaaggtcgagatatttcaaggaagaatgtggagaaagccaaccaagattatccatgtg |
19461158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 14896508 - 14896776
Alignment:
| Q |
18 |
gtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggat |
117 |
Q |
| |
|
||||||||||||||||||| || || ||||||||||| | ||| ||||||| |||| ||||||||||||||||||||||||| |||| ||||| | |
|
|
| T |
14896508 |
gtgagattaaaaaacccatttggcaaatgagaggtgaagttgtttaaagaaagattaagaattacaattgaagacaaattcaaatactcaaaagatgagt |
14896607 |
T |
|
| Q |
118 |
tgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatc |
217 |
Q |
| |
|
||| || ||||||||| || ||||| || |||| |||| |||||| ||||| ||||||||| ||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
14896608 |
tgaacatgaagttgttcagtttgcaatcagtcaattgtagttctaatagtgagggaagtgtactcactacttgaagccaattggattccttgtgaagatc |
14896707 |
T |
|
| Q |
218 |
aattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
||||||| | ||| ||||||||| ||||||||| ||||||||| ||||| |||| ||||||||||||| |
|
|
| T |
14896708 |
aattccactaaggatgagatatttcaaggaagaatgtggagaaagccaatcaagattatccatgtgcag |
14896776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 18015977 - 18015720
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| | |||| |||||| |||||||||||| ||||| |||||||||||| |||| |||||| |
|
|
| T |
18015977 |
ggtgagattaaaaaacccatcaggtatatgagaggtgaagttgttgaaagaaagagaaagagttacaagtgaaggcaaattcaaatactcaacagatgg- |
18015879 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18015878 |
--------gaagttgttcaggttgcacccactcaactctaattctaatagtgaaggaagtgaattcactatttgaagccaattggtttccttatgaagat |
18015787 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
|||| | | | ||||||||||||| || || ||| |||| |||| ||||| ||| |||||||||| |
|
|
| T |
18015786 |
caatccaactaaggttgagatatttcaacgacgaatgtggtgaaagccaatccagattatccatgtg |
18015720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 18115844 - 18115591
Alignment:
| Q |
21 |
agattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattga |
120 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | ||| ||||||| ||||||||||| | |||||||||||||||| |||| |||||| |
|
|
| T |
18115844 |
agattaaaaaacccatcaggtaaatgagaggtgaagttgtttaaagaaagatcaagagttacaagtaaagacaaattcaaatactcaacagatgg----- |
18115750 |
T |
|
| Q |
121 |
tcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaat |
220 |
Q |
| |
|
||||||||| ||||| || |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
18115749 |
----gaagttgttcaggttacaatgactcaactgtaattctaatagtgaaggaagtgtattcactatttgaagccaattggtttccttatgaagatgaat |
18115654 |
T |
|
| Q |
221 |
tccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
|||| | |||| |||||||| ||||||||| ||||||||| |||| |||| |||||||||| |
|
|
| T |
18115653 |
tccactaaggtcgagatatttcaaggaagaatgtggagaaagccaaccaagattatccatgtg |
18115591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 22 - 280
Target Start/End: Complemental strand, 19393027 - 19392769
Alignment:
| Q |
22 |
gattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattgat |
121 |
Q |
| |
|
||||||||||||||| ||||| | |||||||| | ||||| ||||||| ||||||||||| |||||||||||||||||| |||| |||||| ||||| |
|
|
| T |
19393027 |
gattaaaaaacccattaggtatattggaggtgaagttgttgtaagaaagatcaagagttacaagtgaagacaaattcaaatactcaaaagatggcttgat |
19392928 |
T |
|
| Q |
122 |
caggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaatt |
221 |
Q |
| |
|
| |||||| | ||||| || |||| || ||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
19392927 |
cttgaagttttcgaggttacattcacttaattgtaattctaacagtgaagaaagtatactcactgcttgaagccaattggtttccttatgaagatcaatt |
19392828 |
T |
|
| Q |
222 |
ccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccat |
280 |
Q |
| |
|
||| | ||| |||||||| || |||||||||||||||| ||||| |||||||||||| |
|
|
| T |
19392827 |
ccacttaggaagagatatttcaatgaagaaagtggagaaagccaatcaagactatccat |
19392769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 19414067 - 19413821
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| | ||||| ||||||| ||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
19414067 |
ggtgagattaaaaaacccatcaggtatatgagaggtgaagttgttgtaagaaagatcaagagttacaattgaagacaaattcaaatgctcaacagatgg- |
19413969 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
|||||| |||||||| || ||||| |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
19413968 |
--------gaagttatttaggttacaatgactcatctgtaattctaatagtgaaggaagtgtattcactatttgaggccaattggtttccttatgaagat |
19413877 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaaga |
272 |
Q |
| |
|
|||| | | | ||| ||||||||| || |||||||||||| ||| |||||||||| |
|
|
| T |
19413876 |
caatccaactaagggtgagatatttcaacgaagaaagtggataaagccaatgaaga |
19413821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 18022685 - 18022419
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||| | |||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
18022685 |
ggtgagattaaaaaacccatttggtaaatgagaggtgaagttgttgaaagaaagatcaagagttacaagtgaagacaaattcaaatactcaatagatggg |
18022586 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||| |||| | || | || || | ||||||||||||| ||| ||||||||||||| ||| | |||||||| ||| ||||||||||||||||||| |
|
|
| T |
18022585 |
ttgatcatgaagctattcaatttacaatcgctcaactgtaattgtaatagtgaaggaagtgaattgattacttgaaaccagttggtttccttatgaagat |
18022486 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
||| |||| |||||| |||||||| ||||||||||||| ||||| ||| | |||| |||| ||||| |
|
|
| T |
18022485 |
caagtccactgaggtcgagatatttcaaggaagaaagtgaagaaagccagtcaagattatctatgtg |
18022419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 21 - 286
Target Start/End: Complemental strand, 19333888 - 19333632
Alignment:
| Q |
21 |
agattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattga |
120 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| || | ||| | ||||||| |||||||||||||||||||||||||||||| ||| | |||| |
|
|
| T |
19333888 |
agattaaaaaacccatcaagtaaatgagaggtaaagttgtttctagaaagatcaagagttacaattgaagacaaattcaaatactcatcaaatgg----- |
19333794 |
T |
|
| Q |
121 |
tcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaat |
220 |
Q |
| |
|
||||||||| | || || ||||||||||||||||||| ||||||||||||| |||||||| ||||| | |||||||||||||| |||||||||| |
|
|
| T |
19333793 |
----gaagttgttcaatttacaatcactcaactgtaattctaatagtgaaggaagtgaattcactatttgaaacaaattggtttccttaggaagatcaat |
19333698 |
T |
|
| Q |
221 |
tccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
| | ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
19333697 |
gttactaaggttgagatattttaaggaagaaagtgaagaaagccaatgaagactatccatgtgcag |
19333632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 67 - 272
Target Start/End: Complemental strand, 19351227 - 19351031
Alignment:
| Q |
67 |
aaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattgatcaggaagttgtttaggttgcacccactcaactgtaattctaacag |
166 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| |||| |||||| ||||||||| ||||| || ||| ||||||||||| |||||| |
|
|
| T |
19351227 |
aaagatcaagagttacaagtgaagacaaattcaaatactcaacagatgg---------gaagttgttcaggttacattcacccaactgtaattttaacag |
19351137 |
T |
|
| Q |
167 |
tgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaa |
266 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
19351136 |
tgaaggaagtgaattcactatttgaagccaattggtttccttatgaagatcaattccaccgaggttgagatattttatggaagaaagtggagaaagccaa |
19351037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 286
Target Start/End: Complemental strand, 19375577 - 19375308
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||| |||| ||||||||||||||||||||||| | |||| ||||||| |
|
|
| T |
19375577 |
ggtgagattaaaaaacccatcaggtaaatgaaaggtgaaattgtttgaagaaagatcaagacttacaattgaagacaaattcaaaaactcaacagatgga |
19375478 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
|||||||| ||||| |||| |||||||||||||||||| ||||||||||||| | ||||||||| || |||||||||| |||||||||||| |
|
|
| T |
19375477 |
---------aagttgttcaggttacaccgactcaactgtaattctaatagtgaaggaagtgaagtcactacttcaaaccaattggttaccttatgaagat |
19375387 |
T |
|
| Q |
217 |
ca---------attccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
|| | |||| |||||||||||||| ||||||||||||| ||||| ||| |||||| ||||||||||||| |
|
|
| T |
19375386 |
caactccaaagactccaccgaggttgagatatttcaaggaagaaagtgaagaaagccattgaagattatccatgtgcag |
19375308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 19424499 - 19424233
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||| |||| ||||||| ||| |||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
19424499 |
ggtgagattaaaaaacccatcaggtaaatgagaggcgaaattgttgaaagaaagatcaagtgttacaattgaagacaaattcaaatactcaattgatggg |
19424400 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||| |||||||||| | || || |||| | ||||||| ||| ||||||||||||||| | ||| |||||| ||||||| |||| ||| ||||| |
|
|
| T |
19424399 |
ttgatcatgaagttgtttggtttccaatcacttatttgtaattgtaatagtgaaggaagtgtactgactccttgaatccaattgctttctttagaaagat |
19424300 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
|||||||| | |||| |||| | || |||||||||| ||||| ||||| |||| |||||||||| |
|
|
| T |
19424299 |
caattccactaaggtaaagattctccaacgaagaaagtgaagaaagccaatcaagattatccatgtg |
19424233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 24493535 - 24493801
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
|||||| |||||||| ||| ||||| |||||| |||| | ||| | ||||||| ||||||||||| ||||||||||||| |||| |||| | ||| |
|
|
| T |
24493535 |
ggtgaggttaaaaaatgcatttggtaactgagagctgaagttgttttcagaaagatcaagagttacaagtgaagacaaattcgaatactcaaaaaatgag |
24493634 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||| ||||||||||||||| || || ||| |||||||||| ||||||||||||||| |||| ||||||||||||||||||||| | |||||| |
|
|
| T |
24493635 |
ttgatcatgaagttgtttaggttacaatcaatcatacgtaattctaatagtgaaggaagtgtagccacttcttgaagccaattggtttcctcacgaagat |
24493734 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
| |||||| | ||||||||||||| || ||||||||||||| || |||||||||| |||||||||| |
|
|
| T |
24493735 |
cgattccactaaggttgagatatttcaacgaagaaagtggaggaagccaatgaagattatccatgtg |
24493801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 25462930 - 25462667
Alignment:
| Q |
20 |
gagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattg |
119 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| | ||||| ||||||| |||||||| || ||||||||||||||||| ||||||||| ||| |
|
|
| T |
25462930 |
gagattaaaaaaaccatcaggtaaatgagaggtgaagttgttgtaagaaagatcaagagttaaaagcgaagacaaattcaaatacccaatagatgatttg |
25462831 |
T |
|
| Q |
120 |
atcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaa |
219 |
Q |
| |
|
||| ||||||||| | | || | ||| || || || || ||||||| ||| ||| |||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
25462830 |
gtcatgaagttgttcaaatcacaagcttgcaagtgcaactcgaatagtgaagaaagagtagacactgcttgaagccaattagtttccttatgaagatcaa |
25462731 |
T |
|
| Q |
220 |
ttccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
|| |||||||||||||||||| ||||||||| | |||||||| |||||||||| |||||||||| |
|
|
| T |
25462730 |
ttgcattgaggttgagatattttaaggaagataatggagaaagccaatgaagattatccatgtg |
25462667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 17941621 - 17941364
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||||| ||| | |||||| |||||||||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
17941621 |
ggtgagattaaaaaacccatcaggtatataagaggtgaaattgtttctagaaagagaaagagttacaagtgaagacaaattcaaatattcaacagatgg- |
17941523 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||||| ||||| || | | || |||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |
|
|
| T |
17941522 |
--------gaagttgttcaggttacaactttttaatcgtaactctaatagtgaaggaagtgtattcactgcttgaagccaattagtttcctcatgaagat |
17941431 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
|||| ||| | ||| |||||||| |||| ||||| |||||||| |||||||||| |||||||||| |
|
|
| T |
17941430 |
caatgccactaaggcggagatatttcaaggtagaaaatggagaaagccaatgaagattatccatgtg |
17941364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 286
Target Start/End: Complemental strand, 18146709 - 18146444
Alignment:
| Q |
21 |
agattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattga |
120 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| |||| || |||||||| |||||||| || |||||||||||||||||| ||||||||| || | |
|
|
| T |
18146709 |
agattaaaatacccatcaggtaaatgagaggttaaattatttcctgaaagatcaagagttataagtgaagacaaattcaaatacccaatagatgtgttaa |
18146610 |
T |
|
| Q |
121 |
tcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaat |
220 |
Q |
| |
|
| | ||||||||| ||||| || | ||||| ||||| ||| ||||||||||||| ||| |||||||||| ||| ||||||||||| ||||||||||| |
|
|
| T |
18146609 |
ttatgaagttgttcaggttacaattaaacaactttaattttaatagtgaaggaagtgaatttactacttgaaaccagttggtttccttgtgaagatcaat |
18146510 |
T |
|
| Q |
221 |
tccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
|| | ||| |||||||| ||||||||||||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
18146509 |
ctcactaagggagagatatttcaaggaagaaagtggagaaagccaatgaagattatgcatgtgcag |
18146444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 16677102 - 16676839
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||| |||||||| | |||| ||| |||| |||| ||||| ||||||| |||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
16677102 |
ggtgagatttaaaaacccgtttagtaactgaaaggttaaattgttgtaagaaagatcaagagttacaattgaagaggaattcaaatacccaatagatgag |
16677003 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
|||| || ||||||||| | || || ||||||| | |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
16677002 |
ttgagcatgaagttgttcaatttacaagaactcaaccgcaattctaatagtgaaggaagtgtattcactttctgaatccaattggtttccttatgaagat |
16676903 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccat |
280 |
Q |
| |
|
||| |||| | |||| |||||| | |||||||||||| | ||| |||||||||| ||||||| |
|
|
| T |
16676902 |
caagtccactaaggtcgagatacttcaaggaagaaagtataaaaagccaatgaagattatccat |
16676839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 149 - 286
Target Start/End: Complemental strand, 17949579 - 17949441
Alignment:
| Q |
149 |
caactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttat-gaagatcaattccattgaggttgagatattgtaagga |
247 |
Q |
| |
|
||||| ||||||||| ||||||| ||||| |||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||| | |||||| |
|
|
| T |
17949579 |
caactttaattctaatagtgaagaaagtgaattcactacttgaaaccaattattttccttattgaagatcaattccaccgaggttgagataatttaagga |
17949480 |
T |
|
| Q |
248 |
agaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
17949479 |
agaaagtggagaaagccaatgaagattatccatgtgcag |
17949441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 149 - 286
Target Start/End: Complemental strand, 19436628 - 19436491
Alignment:
| Q |
149 |
caactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattgaggttgagatattgtaaggaa |
248 |
Q |
| |
|
||||||||||||||| ||||||| ||||| ||||||| |||||| ||| |||||||||||||||||||||||| || | ||||||||||||| ||||||| |
|
|
| T |
19436628 |
caactgtaattctaatagtgaagaaagtgaattcactgcttgaaaccagttggtttccttatgaagatcaatttcagtaaggttgagatattttaaggaa |
19436529 |
T |
|
| Q |
249 |
gaaagtggagaaaaccaatgaagactatccatgtgcag |
286 |
Q |
| |
|
||||| | ||||| ||||| |||| ||| ||||||||| |
|
|
| T |
19436528 |
gaaagggaagaaagccaatcaagattattcatgtgcag |
19436491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 18108322 - 18108067
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
||||||||| |||||||||| ||||| || |||||||| | ||| | ||||| ||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
18108322 |
ggtgagattgaaaaacccatttggtaaatgggaggtgaagttgttttcatcaagattaagagttacaagtgaagacaaattcaaatatctgatagatgtt |
18108223 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
|||| |||||| || ||||| | || ||||||||||||||| ||||||| ||||| |||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
18108222 |
ccaatcaagaagttattaaggttatagtcaaacaactgtaattctaatagtgaagaaagtgaattcactacttgaaaccagttggtttccttatgaagat |
18108123 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaaga |
272 |
Q |
| |
|
||| |||| ||| ||||||||| ||||||||| ||| ||||| |||||||||| |
|
|
| T |
18108122 |
caactccaccaaggctgagatatttcaaggaagaatgtgaagaaagccaatgaaga |
18108067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 17941837 - 17941740
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
17941837 |
ggtgagattaaaaaacccatcaggtatatgagaggtgaaattgtttccagaaagagaaagagttacaagtgaagacaaattcaaatactcaatagatg |
17941740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 19419684 - 19419603
Alignment:
| Q |
202 |
tttccttatgaagatcaattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||| ||| |||||| |
|
|
| T |
19419684 |
tttccttatgaagatcaattccaccgaggttgagatattttaaggaagaaagtggagaaagccaatcaagattatacatgtg |
19419603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2156 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold2156
Description:
Target: scaffold2156; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 66 - 283
Target Start/End: Original strand, 94 - 310
Alignment:
| Q |
66 |
gaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattgatcaggaagttgtttaggttgcacccactcaactgtaattctaaca |
165 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||| || || ||||| ||||||||||| | |
|
|
| T |
94 |
gaaagataaagagttacaagtgaagacaaattgaaatactcaatagatggattgatcatgaagttgtttagtttacagtaactcagttgtaattctaata |
193 |
T |
|
| Q |
166 |
gtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattgaggttgagatattgtaaggaagaaagtggagaaaacca |
265 |
Q |
| |
|
||||||||| ||| | ||| |||||||||| |||||||||||| |||||||||| ||| | ||| ||||||||| |||||| ||||||| ||||| ||| |
|
|
| T |
194 |
gtgaaggaaaggtacttactgcttgaagccagttggtttccttacgaagatcaatcccaataaggatgagatatt-taaggatgaaagtgaagaaagcca |
292 |
T |
|
| Q |
266 |
atgaagactatccatgtg |
283 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
293 |
atgaagattatccatgtg |
310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 66 - 283
Target Start/End: Complemental strand, 5237 - 5020
Alignment:
| Q |
66 |
gaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattgatcaggaagttgtttaggttgcacccactcaactgtaattctaaca |
165 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||| |||||||||||| || || ||||| ||||||||||| | |
|
|
| T |
5237 |
gaaagataaagagttacaagtgaagacaaattgaaatactcaatagatggtttgatcatgaagttgtttagtttacagtaactcagttgtaattctaata |
5138 |
T |
|
| Q |
166 |
gtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattgaggttgagatattgtaaggaagaaagtggagaaaacca |
265 |
Q |
| |
|
|||||||||| ||| | ||| |||||||||| |||||||||||| |||||||||| ||| | ||| ||||||||| ||||| ||||||| ||||| ||| |
|
|
| T |
5137 |
gtgaaggaagggtacttactgcttgaagccagttggtttccttacgaagatcaatcccactaaggatgagatatttcaaggatgaaagtgaagaaagcca |
5038 |
T |
|
| Q |
266 |
atgaagactatccatgtg |
283 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
5037 |
atgaagattatccatgtg |
5020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 2710693 - 2710959
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||| | ||| ||||| | |||||||| || |||||||||||||||||| ||||||| || |
|
|
| T |
2710693 |
ggtgagattaaaaaacccatttggtaaaggagaggtgaagttgttccaagaaagttcaagagttataagtgaagacaaattcaaatatgcaatagacggg |
2710792 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||| ||||||| |||| || || | ||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
2710793 |
ttgatcatgaagttgcttagtttacaaaaagacaattgtacttctaatagtgaaggaagtgtattcactatttgaagccaattggtttctttatgaagat |
2710892 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
|||| || ||||||||||||||| || |||||||||||||||| ||||| |||| |||| ||||| |
|
|
| T |
2710893 |
caataccgctgaggttgagatatttcaaagaagaaagtggagaaagccaattaagattatctatgtg |
2710959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 283
Target Start/End: Complemental strand, 15532185 - 15531977
Alignment:
| Q |
66 |
gaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattgatcaggaagttgtttaggttgcacccactcaactgtaattctaaca |
165 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||| || |||||||| ||||||||| || || || |||||||| ||| ||||| | |
|
|
| T |
15532185 |
gaaagatcaagagttacaagtgaagacaaattcaaatactcgatagatgg---------gaagttgttcagtttacagtcactcaaccttaaatctaata |
15532095 |
T |
|
| Q |
166 |
gtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattgaggttgagatattgtaaggaagaaagtggagaaaacca |
265 |
Q |
| |
|
|||||||||||||| || || |||||| ||| ||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||||| ||| |
|
|
| T |
15532094 |
gtgaaggaagtgtactctctgcttgaatccagttggtttccttatgaagatcaatccaattaaggttgagatatttcaaggatgaaagtggagaaagcca |
15531995 |
T |
|
| Q |
266 |
atgaagactatccatgtg |
283 |
Q |
| |
|
|| |||| |||||||||| |
|
|
| T |
15531994 |
atcaagattatccatgtg |
15531977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 272
Target Start/End: Complemental strand, 8459355 - 8459107
Alignment:
| Q |
21 |
agattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatggattga |
120 |
Q |
| |
|
|||||||||||||||| |||||| |||| ||||| | ||| ||||||| ||||||||||| |||||||||||||||||| |||| |||||| |||| |
|
|
| T |
8459355 |
agattaaaaaacccattaggtaaaggagatgtgaagttgttccaagaaagatcaagagttacaagtgaagacaaattcaaatactcaagagatgggttga |
8459256 |
T |
|
| Q |
121 |
tcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaat |
220 |
Q |
| |
|
| | ||||||| || || ||| ||| || ||||| ||||| || |||| ||||||| |||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
8459255 |
taa---agttgttcagtttacacttacttaagtgtaactctaatagggaagaaagtgtagccactgcttgaagccaattagtttccttatgaagatcaat |
8459159 |
T |
|
| Q |
221 |
tccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaaga |
272 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||| ||| |||||| |
|
|
| T |
8459158 |
tccattgaggttgagattttttaaggaagaaagtggagaaagccattgaaga |
8459107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 13666997 - 13667254
Alignment:
| Q |
17 |
ggtgagattaaaaaacccatcaggtaagtgagaggtgaaatcgttgtttgaaagataaagagttacaattgaagacaaattcaaatagtcaatagatgga |
116 |
Q |
| |
|
|||||||||||||||| ||| ||||| ||||||||||| | ||| | ||||||| ||||||||| | ||||||||||||||||| |||| |||||| |
|
|
| T |
13666997 |
ggtgagattaaaaaactcattaggtatatgagaggtgaagttgttttcagaaagatcaagagttaccagcgaagacaaattcaaatactcaagagatgg- |
13667095 |
T |
|
| Q |
117 |
ttgatcaggaagttgtttaggttgcacccactcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagat |
216 |
Q |
| |
|
||||||||| ||||| || || |||||| |||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
13667096 |
--------gaagttgttcaggttacaacctctcaaccgtaattctaattgtgaaggaagtgtattcactacttggagccaattagtttccttatgaagat |
13667187 |
T |
|
| Q |
217 |
caattccattgaggttgagatattgtaaggaagaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
|||| ||||| | |||||||| |||||||||| ||||||||||||||||||| |||| ||||| |
|
|
| T |
13667188 |
caatgccattaaaccggagatatttcaaggaagaaaatggagaaaaccaatgaagattatcaatgtg |
13667254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 2509754 - 2509635
Alignment:
| Q |
159 |
tctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattg------aggttgagatattgtaaggaagaaa |
252 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||| | || ||||||||||||| ||||||||||| |
|
|
| T |
2509754 |
tctaatagtgaaggaagtgtactcactacttgtacccaattggttttcttatgaagatcaatggtactgaaaccaaggttgagatattttaaggaagaaa |
2509655 |
T |
|
| Q |
253 |
gtggagaaaaccaatgaaga |
272 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
2509654 |
gtggagaaagccaatgaaga |
2509635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 283
Target Start/End: Complemental strand, 16436148 - 16436013
Alignment:
| Q |
148 |
tcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattgaggttgagatattgtaagga |
247 |
Q |
| |
|
|||| |||||||||||||| |||||||| || || | ||||||||||||||||| |||| | ||||||||| ||| ||||||| ||||||| | | | |
|
|
| T |
16436148 |
tcaattgtaattctaacagggaaggaagcttagccattgcttgaagccaattggttgccttgttaagatcaatcccactgaggtttagatattttcaaca |
16436049 |
T |
|
| Q |
248 |
agaaagtggagaaaaccaatgaagactatccatgtg |
283 |
Q |
| |
|
||||| |||||||| ||| | |||| |||||||||| |
|
|
| T |
16436048 |
agaaaatggagaaacccagtcaagattatccatgtg |
16436013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 16436664 - 16436795
Alignment:
| Q |
148 |
tcaactgtaattctaacagtgaaggaagtgtattcactacttgaagccaattggtttccttatgaagatcaattccattgaggttgagatattgtaagga |
247 |
Q |
| |
|
|||| ||||||||||| || |||||||| || || | ||||||||||||||||| | || ||||||||| ||| |||| |||||||||| |||| | |
|
|
| T |
16436664 |
tcaattgtaattctaatagggaaggaagcttagccattgcttgaagccaattggttgctttgctaagatcaataccactgagattgagatattttaagca |
16436763 |
T |
|
| Q |
248 |
agaaagtggagaaaaccaatgaagactatcca |
279 |
Q |
| |
|
||||| || ||||| ||| | |||| |||||| |
|
|
| T |
16436764 |
agaaaatgtagaaacccagtcaagattatcca |
16436795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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