View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2711_high_37 (Length: 241)
Name: NF2711_high_37
Description: NF2711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2711_high_37 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 45592597 - 45592819
Alignment:
| Q |
1 |
tcttcagatgctgtgcttacaagagttgcaacagaaaagaggctgtcactaatcaaagcatgggaagaaagtgaaaagtcaaaagcagagaacaagtaag |
100 |
Q |
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| T |
45592597 |
tcttcagatgctgtgcttacaagagttgcaacagaaaagaggctgtcactaatcaaagcatgggaagaaagtgaaaagtcaaaagcagagaacaagtaag |
45592696 |
T |
|
| Q |
101 |
agctttcaccatctaatgtttaattttcaaatttttagaaccttattacatcgagtcatgaatttgatgagcagagctcagagaagactttcaaccataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45592697 |
agctttcaccatctaatgtttaattttcaaatttttagaaccttattacatcgagtcatgaatttgatgagcagagctcagagaagactttcaaccataa |
45592796 |
T |
|
| Q |
201 |
cagcatgggagaacagtaagaaa |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
45592797 |
cagcatgggagaacagtaagaaa |
45592819 |
T |
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