View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2711_low_28 (Length: 301)
Name: NF2711_low_28
Description: NF2711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2711_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 19 - 291
Target Start/End: Complemental strand, 40229744 - 40229471
Alignment:
| Q |
19 |
gcttgttgattcgggtgcatattatgtttaaatatataagtgctcatatagattgcttcaaaaaa-taattgcttatatagacttaaatggaaattttaa |
117 |
Q |
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| T |
40229744 |
gcttgttgattcgggtgcatattatgtttaaatatataagtgctcatatagattgcttcaaaaaaataattgcttatatagacttaaatggaaattttaa |
40229645 |
T |
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| Q |
118 |
ttgatggctccaaacttaaagtcatacccgttttagaatgagaactaaataatatacaaatcatctaattatacactcgggcaaagatacacccaaaccc |
217 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40229644 |
ttgatggctccaaacttaaggtcatacccgttttagaatgagaactaaataatatacaaatcatctaattatacactcgggcaaagatacacccaaaccc |
40229545 |
T |
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| Q |
218 |
taaacatattgctattttcaatcaacactccgttagtcttcatgcgtctttatatacaattactacatcttcat |
291 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40229544 |
taaacatattgctattttcaatcaacacaccgttagtcttcatgcgtctttatatacaattactacatcttcat |
40229471 |
T |
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