View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2715_high_27 (Length: 248)
Name: NF2715_high_27
Description: NF2715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2715_high_27 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 50463551 - 50463798
Alignment:
| Q |
1 |
taactcctcgtaccaatgtctccaatgattcgccgtcgttgtagcaatagtaatcttctgattctgttgagaaacttgcagattcagatgatgttgtgaa |
100 |
Q |
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| T |
50463551 |
taactcctcgtaccaatgtctccaatgattcgccgtcgttgtagcaatagtaatcttctgattctgttgagaaacttgcagattcagatgatgttgtgaa |
50463650 |
T |
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| Q |
101 |
ccatgattttggtgtttctatattaatgttgtctgtttggtcaaaaaacacagaattaaccgttttgaatatgtgatcatcagcagcagaagcagaagca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
50463651 |
ccatgattttggtgtttctatattaatgttgtctgtttggtcaaaaaacacagaattaaccgttttgaatatgtgatcatcagcagcagaagtagaagca |
50463750 |
T |
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| Q |
201 |
gcaccaactcgaaaagaaagagtttttggatgggcacaagagggtaag |
248 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
50463751 |
gcaccaactcgaaaagaaagagtttttggatggccacaagagggtaag |
50463798 |
T |
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