View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2716_low_8 (Length: 303)

Name: NF2716_low_8
Description: NF2716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2716_low_8
NF2716_low_8
[»] chr1 (51 HSPs)
chr1 (1-292)||(41147210-41147502)
chr1 (1-52)||(34874649-34874700)
chr1 (1-52)||(49508707-49508758)
chr1 (166-216)||(43380545-43380595)
chr1 (166-218)||(51465752-51465804)
chr1 (2-52)||(29966906-29966956)
chr1 (2-51)||(42607298-42607347)
chr1 (1-52)||(22346210-22346261)
chr1 (169-216)||(29373965-29374012)
chr1 (1-51)||(2125681-2125731)
chr1 (1-51)||(27209695-27209745)
chr1 (168-218)||(39841273-39841323)
chr1 (1-51)||(43433857-43433907)
chr1 (232-292)||(30856162-30856220)
chr1 (166-218)||(171446-171498)
chr1 (1-53)||(11385782-11385834)
chr1 (166-218)||(46728722-46728774)
chr1 (1-52)||(7190448-7190499)
chr1 (233-292)||(39840581-39840640)
chr1 (166-287)||(39958001-39958122)
chr1 (1-47)||(932135-932181)
chr1 (168-218)||(1743209-1743259)
chr1 (58-116)||(11645730-11645788)
chr1 (1-51)||(24140855-24140904)
chr1 (1-51)||(28850884-28850934)
chr1 (166-218)||(26252813-26252864)
chr1 (232-292)||(39025442-39025502)
chr1 (166-218)||(39840511-39840563)
chr1 (1-53)||(50295405-50295457)
chr1 (166-218)||(51466469-51466521)
chr1 (1-52)||(4940713-4940764)
chr1 (1-52)||(32213862-32213913)
chr1 (232-287)||(36005823-36005878)
chr1 (1-52)||(47655344-47655395)
chr1 (232-287)||(50126384-50126439)
chr1 (1-39)||(8244170-8244208)
chr1 (2-52)||(33930049-33930099)
chr1 (1-47)||(40845333-40845379)
chr1 (166-216)||(46046439-46046489)
chr1 (232-292)||(1743952-1744011)
chr1 (233-292)||(7649093-7649153)
chr1 (232-288)||(7649772-7649828)
chr1 (166-218)||(16878746-16878798)
chr1 (166-218)||(19439278-19439330)
chr1 (166-218)||(21081049-21081101)
chr1 (232-280)||(29373204-29373252)
chr1 (260-288)||(36005304-36005332)
chr1 (166-218)||(37910741-37910793)
chr1 (166-218)||(43379770-43379822)
chr1 (166-218)||(46727929-46727981)
chr1 (166-218)||(51994719-51994771)
[»] chr8 (35 HSPs)
chr8 (168-292)||(42093429-42093552)
chr8 (1-53)||(19389285-19389337)
chr8 (5-52)||(18808953-18809000)
chr8 (166-218)||(7601715-7601767)
chr8 (166-217)||(30427081-30427132)
chr8 (233-287)||(32637333-32637387)
chr8 (168-218)||(40784809-40784859)
chr8 (1-50)||(45338086-45338135)
chr8 (166-218)||(11596579-11596631)
chr8 (1-53)||(21016316-21016368)
chr8 (166-218)||(39529569-39529621)
chr8 (166-291)||(14445983-14446108)
chr8 (1-52)||(21016033-21016084)
chr8 (2-53)||(35930219-35930270)
chr8 (166-215)||(35627058-35627107)
chr8 (3-51)||(5129433-5129481)
chr8 (232-292)||(30136651-30136711)
chr8 (166-218)||(36187188-36187240)
chr8 (166-218)||(39528864-39528916)
chr8 (166-218)||(41723209-41723261)
chr8 (1-52)||(4990015-4990066)
chr8 (166-287)||(24700422-24700543)
chr8 (166-215)||(5876148-5876197)
chr8 (19-52)||(22488765-22488798)
chr8 (258-287)||(24701064-24701093)
chr8 (181-218)||(37321157-37321194)
chr8 (166-218)||(5339868-5339920)
chr8 (232-292)||(7601634-7601694)
chr8 (166-218)||(10499858-10499910)
chr8 (166-218)||(15224752-15224804)
chr8 (19-47)||(27982289-27982317)
chr8 (19-47)||(28039591-28039619)
chr8 (232-288)||(36186547-36186603)
chr8 (166-218)||(37727102-37727154)
chr8 (232-292)||(41723928-41723988)
[»] chr5 (28 HSPs)
chr5 (166-292)||(40366260-40366385)
chr5 (166-218)||(19432549-19432601)
chr5 (1-50)||(4421942-4421991)
chr5 (166-218)||(16899910-16899962)
chr5 (2-50)||(39567986-39568034)
chr5 (2-53)||(338739-338790)
chr5 (1-47)||(35653236-35653282)
chr5 (167-216)||(3098306-3098355)
chr5 (1-52)||(16315510-16315561)
chr5 (166-217)||(31558239-31558290)
chr5 (168-218)||(6895206-6895256)
chr5 (1-47)||(15915914-15915960)
chr5 (234-292)||(32694705-32694763)
chr5 (1-50)||(28143101-28143150)
chr5 (1-53)||(104904-104956)
chr5 (166-218)||(3099095-3099147)
chr5 (2-50)||(8410225-8410273)
chr5 (166-218)||(31559042-31559094)
chr5 (1-36)||(25017283-25017318)
chr5 (1-52)||(34546860-34546911)
chr5 (261-292)||(39084245-39084276)
chr5 (10-49)||(40099422-40099461)
chr5 (166-216)||(32694780-32694830)
chr5 (1-51)||(35945328-35945378)
chr5 (168-218)||(39084320-39084370)
chr5 (258-287)||(11120302-11120331)
chr5 (260-288)||(19825485-19825513)
chr5 (166-218)||(38914282-38914334)
[»] chr4 (54 HSPs)
chr4 (1-53)||(55669821-55669873)
chr4 (1-52)||(35808372-35808423)
chr4 (1-52)||(26040336-26040387)
chr4 (1-51)||(27839283-27839333)
chr4 (2-51)||(2362714-2362763)
chr4 (166-218)||(865416-865468)
chr4 (1-53)||(41956188-41956240)
chr4 (2-49)||(31487804-31487851)
chr4 (2-53)||(34316697-34316748)
chr4 (2-52)||(31755021-31755071)
chr4 (168-218)||(54110489-54110539)
chr4 (166-218)||(29517840-29517892)
chr4 (5-53)||(51290516-51290564)
chr4 (168-218)||(9170694-9170744)
chr4 (171-217)||(11701690-11701736)
chr4 (1-47)||(16559975-16560021)
chr4 (1-51)||(19328724-19328774)
chr4 (1-51)||(32131224-32131274)
chr4 (1-51)||(34016707-34016757)
chr4 (2-52)||(46695938-46695988)
chr4 (166-288)||(29144786-29144907)
chr4 (166-215)||(39263627-39263676)
chr4 (166-292)||(44876066-44876190)
chr4 (240-293)||(47864564-47864617)
chr4 (240-293)||(52477719-52477772)
chr4 (166-218)||(572177-572229)
chr4 (3-51)||(23765662-23765710)
chr4 (166-218)||(29145243-29145295)
chr4 (2-50)||(54339195-54339243)
chr4 (232-287)||(53534958-53535013)
chr4 (258-288)||(572106-572136)
chr4 (258-292)||(4730658-4730692)
chr4 (166-216)||(6056410-6056460)
chr4 (1-51)||(19876160-19876210)
chr4 (234-292)||(24573795-24573853)
chr4 (1-51)||(26831763-26831813)
chr4 (2-48)||(30475508-30475554)
chr4 (1-51)||(31168216-31168266)
chr4 (167-217)||(38658508-38658558)
chr4 (1-47)||(45688825-45688871)
chr4 (233-287)||(46620173-46620227)
chr4 (168-217)||(866279-866328)
chr4 (258-287)||(16836306-16836335)
chr4 (15-52)||(34334626-34334663)
chr4 (253-290)||(42712065-42712102)
chr4 (169-218)||(42712140-42712189)
chr4 (2-47)||(54400291-54400336)
chr4 (166-218)||(6711120-6711172)
chr4 (2-42)||(9693368-9693408)
chr4 (166-218)||(38657828-38657880)
chr4 (253-289)||(42711518-42711554)
chr4 (166-218)||(48615226-48615278)
chr4 (166-218)||(51162918-51162970)
chr4 (168-212)||(53119583-53119627)
[»] chr2 (40 HSPs)
chr2 (2-54)||(23685637-23685689)
chr2 (1-52)||(765126-765177)
chr2 (1-52)||(39401511-39401562)
chr2 (166-292)||(2075674-2075799)
chr2 (2-53)||(27495206-27495257)
chr2 (166-217)||(39233938-39233989)
chr2 (166-216)||(44075836-44075886)
chr2 (6-51)||(4023353-4023398)
chr2 (232-289)||(11735722-11735779)
chr2 (4-53)||(17056033-17056082)
chr2 (4-53)||(17068480-17068529)
chr2 (1-53)||(1321250-1321302)
chr2 (166-218)||(3834927-3834979)
chr2 (166-218)||(5429050-5429102)
chr2 (166-218)||(16011366-16011418)
chr2 (1-53)||(17074463-17074515)
chr2 (166-218)||(18234191-18234243)
chr2 (2-37)||(33726463-33726498)
chr2 (167-213)||(914381-914427)
chr2 (2-52)||(33864438-33864488)
chr2 (232-289)||(19281793-19281850)
chr2 (166-218)||(5429803-5429855)
chr2 (166-218)||(15994487-15994539)
chr2 (1-53)||(17095042-17095094)
chr2 (260-292)||(28783899-28783931)
chr2 (170-217)||(2215046-2215093)
chr2 (166-216)||(4069609-4069659)
chr2 (1-47)||(16361648-16361694)
chr2 (1-47)||(39085773-39085819)
chr2 (1-38)||(17603893-17603930)
chr2 (19-52)||(31921207-31921240)
chr2 (19-47)||(168680-168708)
chr2 (1-49)||(862671-862719)
chr2 (1-53)||(2966622-2966674)
chr2 (166-218)||(8873686-8873738)
chr2 (15-47)||(9991421-9991453)
chr2 (166-218)||(26241021-26241073)
chr2 (166-218)||(26882744-26882796)
chr2 (166-218)||(28784823-28784875)
chr2 (2-42)||(35445276-35445316)
[»] chr3 (48 HSPs)
chr3 (1-52)||(41346356-41346407)
chr3 (2-52)||(29915551-29915601)
chr3 (2-52)||(29964704-29964754)
chr3 (166-218)||(54280853-54280905)
chr3 (1-52)||(32415651-32415702)
chr3 (2-53)||(36730128-36730179)
chr3 (3-50)||(37509195-37509242)
chr3 (167-218)||(54295102-54295153)
chr3 (1-51)||(1803970-1804020)
chr3 (166-218)||(4996371-4996423)
chr3 (166-218)||(21103610-21103662)
chr3 (166-218)||(42489286-42489338)
chr3 (9-48)||(10854953-10854992)
chr3 (1-52)||(25102298-25102349)
chr3 (166-217)||(43656221-43656272)
chr3 (1-52)||(48136699-48136750)
chr3 (166-213)||(53427408-53427455)
chr3 (1-51)||(8847429-8847479)
chr3 (167-217)||(41354414-41354464)
chr3 (1-51)||(44570363-44570413)
chr3 (166-290)||(11058378-11058499)
chr3 (1-42)||(35306414-35306455)
chr3 (166-215)||(42121747-42121796)
chr3 (166-211)||(53427978-53428023)
chr3 (166-218)||(31090674-31090726)
chr3 (166-288)||(41780331-41780453)
chr3 (168-216)||(42488454-42488502)
chr3 (166-218)||(44706911-44706963)
chr3 (166-218)||(54281704-54281756)
chr3 (234-289)||(21102671-21102726)
chr3 (241-292)||(43655413-43655464)
chr3 (233-288)||(53427907-53427962)
chr3 (261-292)||(54281624-54281655)
chr3 (1-51)||(4759827-4759877)
chr3 (233-287)||(4996834-4996888)
chr3 (1-51)||(8715479-8715528)
chr3 (1-51)||(9067366-9067415)
chr3 (240-290)||(25166681-25166731)
chr3 (168-218)||(48045648-48045698)
chr3 (181-218)||(23142821-23142858)
chr3 (258-287)||(31091270-31091299)
chr3 (166-215)||(43631220-43631269)
chr3 (2-51)||(44695648-44695697)
chr3 (166-218)||(23485500-23485552)
chr3 (233-289)||(25913294-25913350)
chr3 (166-210)||(41354792-41354836)
chr3 (166-218)||(44707556-44707608)
chr3 (166-218)||(44878995-44879047)
[»] chr7 (35 HSPs)
chr7 (1-51)||(48454799-48454849)
chr7 (1-50)||(40763331-40763380)
chr7 (1-53)||(24359683-24359735)
chr7 (166-218)||(37796598-37796650)
chr7 (168-292)||(14419392-14419516)
chr7 (1-50)||(8258621-8258670)
chr7 (166-288)||(32497001-32497124)
chr7 (2-49)||(8380524-8380571)
chr7 (2-53)||(29034770-29034821)
chr7 (1-52)||(43567482-43567533)
chr7 (166-218)||(41345437-41345489)
chr7 (1-50)||(5240310-5240359)
chr7 (166-215)||(40193861-40193910)
chr7 (166-218)||(789299-789351)
chr7 (166-218)||(17995850-17995902)
chr7 (166-218)||(21985584-21985636)
chr7 (166-218)||(26828766-26828818)
chr7 (232-288)||(48540675-48540730)
chr7 (233-288)||(41567402-41567457)
chr7 (166-217)||(47723485-47723536)
chr7 (1-51)||(7322930-7322980)
chr7 (1-51)||(8292827-8292877)
chr7 (259-289)||(8408085-8408115)
chr7 (1-51)||(30538457-30538507)
chr7 (2-52)||(36279202-36279252)
chr7 (258-292)||(37796690-37796724)
chr7 (166-211)||(26829629-26829674)
chr7 (166-218)||(6822605-6822657)
chr7 (166-218)||(11337039-11337091)
chr7 (232-288)||(26585541-26585597)
chr7 (1-53)||(27053468-27053520)
chr7 (166-218)||(34458856-34458908)
chr7 (190-218)||(35088398-35088426)
chr7 (260-288)||(46196678-46196706)
chr7 (258-290)||(47723410-47723442)
[»] chr6 (14 HSPs)
chr6 (1-51)||(26572059-26572109)
chr6 (1-49)||(10855514-10855562)
chr6 (172-292)||(3184691-3184808)
chr6 (1-52)||(5578356-5578407)
chr6 (1-51)||(29692318-29692368)
chr6 (1-51)||(32786298-32786347)
chr6 (169-218)||(544343-544392)
chr6 (167-217)||(2812504-2812554)
chr6 (258-287)||(477013-477042)
chr6 (1-50)||(16437568-16437617)
chr6 (166-218)||(477656-477708)
chr6 (166-218)||(1175109-1175161)
chr6 (2-30)||(6866998-6867026)
chr6 (166-218)||(32403976-32404028)
[»] scaffold0062 (3 HSPs)
scaffold0062 (1-52)||(16748-16799)
scaffold0062 (1-52)||(26916-26967)
scaffold0062 (1-52)||(37082-37133)
[»] scaffold0785 (1 HSPs)
scaffold0785 (166-217)||(1578-1629)
[»] scaffold0141 (1 HSPs)
scaffold0141 (240-290)||(10381-10431)
[»] scaffold0187 (1 HSPs)
scaffold0187 (166-218)||(28284-28336)


Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 41147502 - 41147210
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcctacaacttatagtacacctccaactaaccctattcataacaagttatga 100  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  41147502 ctatttttatccccttatccaatgccccaaggacaatggttagcattctcctacgaattatagtacacctccaactaaccctattcataacaagttatga 41147403  T
Q  101 ttcttagacccttttactcacaaattaccatttaaattatatcatcatataaagaaat-nnnnnnngcttaaatatgataatcgttcctgtaatttggat 199  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||| | ||||||||||      
T  41147402 ttcttagacccttttactcacaaattaccagttaaattatatcatcatataaagaaataaaaaaaggcttaaatatgataatcgtccttgtaatttgggc 41147303  T
Q  200 cagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||||| ||| |          |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  41147302 cagttttgattttcgttccggtaaaaaaaaaactttgaaatacatctctataaaaaaaattttgtttgaaaaaggtccctgaccccacttcat 41147210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34874649 - 34874700
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34874649 ctatttttatccccttatccaatgccccaagggcaatggttagcattctcct 34874700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 49508758 - 49508707
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49508758 ctatttttatccccttatccaatgccccaagggcaatggttaacattttcct 49508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 43380595 - 43380545
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43380595 gcttaaatatgataatcgtccctgtaatttggatcagttttgattttcgtc 43380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 51465752 - 51465804
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  51465752 gcttaaatatgataatagtccctgtaatttggatcagttttgattttcgtccc 51465804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 29966906 - 29966956
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  29966906 tatttttatccccttatccaatgctccaaggacaatggttaacattctcct 29966956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 42607347 - 42607298
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  42607347 tatttttatccccttatccaataccctaagggcaatggttaacattctcc 42607298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22346261 - 22346210
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  22346261 ctatttttattcccttatccaaagccccaagggcaatggttagcattctcct 22346210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 29374012 - 29373965
Alignment:
Q  169 taaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||    
T  29374012 taaatatgataatcgtccttgtaatttggatcagttttgattttcgtc 29373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2125731 - 2125681
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  2125731 ctatttttatccccttatccaatgccccaagaacaatggttagcattctcc 2125681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27209745 - 27209695
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||    
T  27209745 ctatttttatccctttatccaatgccccaaggacaatggttagcattctcc 27209695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 39841323 - 39841273
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  39841323 ttaaatatgataatcgtccctgtaatttggtccagttttgattttcgtccc 39841273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43433857 - 43433907
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  43433857 ctatttttatccccttatccaatgccccaagagcaatagttagcattctcc 43433907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 30856162 - 30856220
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||| ||||||||||  ||  ||||||||||||||||||||||||||||||    
T  30856162 ctttgaaatacatccctataaaaaaaatt--gtttgaaaaaggtccctgaccccacttcat 30856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 171498 - 171446
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||||||||||    
T  171498 gcttaaatatgataatcgtctctgtaatttgagtcagttttgattttcgtccc 171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11385834 - 11385782
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||||||||||||||||  ||||||||||||| | ||||||||||    
T  11385834 ctatttttatccccttatccaatgctgcaagggcaatggtcagcattctccta 11385782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 46728774 - 46728722
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||||||||||    
T  46728774 gcttaaatatgataatcgtcactgtagtttgggtcagttttgattttcgtccc 46728722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7190499 - 7190448
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||| |||| |||||||||||||||||| ||||| |||||||||    
T  7190499 ctatttttatcctcttaaccaatgccccaagggcaaaggttagcattctcct 7190448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 39840581 - 39840640
Alignment:
Q  233 tttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    ||||||||||||| || ||||    |||||||||||||||||||||||||||||||||||    
T  39840581 tttgaaatacatccctgtaaatttttttttgtttgaaaaaggtccctgaccccacttcat 39840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 287
Target Start/End: Original strand, 39958001 - 39958122
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    |||||||||||||| | || |||||||||||| || ||||||| ||||||||| ||          ||||||| |||||| || |||||||   ||||||    
T  39958001 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccctataaaaaaaaaactttgaattacatccctgtaaaaaaaaatttgtt 39958100  T
Q  266 tgaaaaaggtccctgaccccac 287  Q
    ||||||||||||||| ||||||    
T  39958101 tgaaaaaggtccctggccccac 39958122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 932181 - 932135
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  932181 ctatttttatccccttatccaatgccccaagaacaatgattaacatt 932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 1743209 - 1743259
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  1743209 ttaaatatgataatcgtccctataatttagttcagttttgattttcgtccc 1743259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 11645730 - 11645788
Alignment:
Q  58 ttatagtacacctccaactaaccctattcataacaagttatgattcttagaccctttta 116  Q
    ||||||||||||||  ||||||| |||||||||||| |||| ||||||||| |||||||    
T  11645730 ttatagtacacctctgactaaccatattcataacaaattataattcttagagcctttta 11645788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24140855 - 24140904
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  24140855 ctatttttatccccttatc-aatgccccaaaggcaatggttagcattctcc 24140904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28850934 - 28850884
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||| | |||||| |||||||||||||||||||||| ||||||||    
T  28850934 ctatttttattctcttatctaatgccccaagggcaatggttagcattctcc 28850884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 26252864 - 26252813
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||| || |||||||||||  ||||||||||||||||||||    
T  26252864 gcttaaatatgataattgt-cctgtaatttgagtcagttttgattttcgtccc 26252813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 39025442 - 39025502
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||| ||  |||||  ||||||||||||||||||||||| || ||||||||    
T  39025442 ctttgaaatacatccctgcaaaaatttttttgtttgaaaaaggtccctggccacacttcat 39025502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 39840511 - 39840563
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| | | |||||||| | ||||||||||||||||||||    
T  39840511 gcttaaatatgataatcatccatgtaattttggtcagttttgattttcgtccc 39840563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 50295457 - 50295405
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||| |||||||||||||||||||| | | ||| ||||||||||||||    
T  50295457 ctatttttacccccttatccaatgccccaaagacgatgattaacattctccta 50295405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 51466521 - 51466469
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| | | |||||| | ||||||||||||||||||||    
T  51466521 gcttaaatatgataatcgtccttataatttaggtcagttttgattttcgtccc 51466469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 4940764 - 4940713
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||||| || |  |||||||||| |||||||||    
T  4940764 ctatttttatccccttatccaatgcgcctaaagcaatggttagcattctcct 4940713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32213913 - 32213862
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||| |||| |||||| ||||||||||  ||||||||    
T  32213913 ctatttttatccccttatctaatgtcccaagagcaatggttagtattctcct 32213862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 36005878 - 36005823
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||| ||||||||||||||    ||||||||||||||||||||||| ||||||    
T  36005878 ctttgaattacatctctataaattcttttttgtttgaaaaaggtccctggccccac 36005823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 47655395 - 47655344
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||| ||||| |  |||||||||||||| |||||||||    
T  47655395 ctatttttatccccttattcaatgtcttaagggcaatggttagcattctcct 47655344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 50126439 - 50126384
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||| |||||| || ||||||| ||||||||||||||||||| ||| ||||||    
T  50126439 ctttgaattacatccctgtaaaaaattttttgtttgaaaaaggtcactggccccac 50126384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8244170 - 8244208
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatgg 39  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  8244170 ctatatttatccccttatccaatgccccaagagcaatgg 8244208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 33930049 - 33930099
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||  | ||| | |||||||||||||||||||    
T  33930049 tatttttatccccttatccaatatctcaaagacaatggttaacattctcct 33930099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40845333 - 40845379
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||||||||||| ||||| | ||||||||||||||| ||||    
T  40845333 ctatttttatccccttattcaatgtctcaagggcaatggttagcatt 40845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 46046439 - 46046489
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    |||||||||||||||||||   |||||||||| ||||||||||||| ||||    
T  46046439 gcttaaatatgataatcgtcgttgtaatttggctcagttttgatttccgtc 46046489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 1744011 - 1743952
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||| |||||||    |||||||||||||| |||| |||||||||||||||    
T  1744011 ctttgaaatacatccctataaattt-tttttgtttgaaaatggtcgctgaccccacttcat 1743952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 7649093 - 7649153
Alignment:
Q  233 tttgaaatacatctctataaaaaagtt-tttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||||| |||||||    ||||||||||||||||| ||| |||||||||||    
T  7649093 tttgaaatacatctctgtaaaaaaaaaatttgtttgaaaaaggtctctgtccccacttcat 7649153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 7649828 - 7649772
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccact 288  Q
    |||||||||||||| || |||||||  ||||||||||||||| || ||| |||||||    
T  7649828 ctttgaaatacatccctgtaaaaaatattttgtttgaaaaagatctctggccccact 7649772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 16878746 - 16878798
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||| | | |||||||||||||||||    
T  16878746 gcttaaatatgattttcgtccctgtaatttgaacccgttttgattttcgtccc 16878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 19439330 - 19439278
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||||| ||||||||||  | |||||||||||||||||    
T  19439330 gcttaaatatgattttcgttcttgtaatttgggcccgttttgattttcgtccc 19439278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 21081101 - 21081049
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | || |||||||||||| |||||||| | |||||||||    
T  21081101 gcttaaatatgatattagtccctgtaatttgggtcagttttaaatttcgtccc 21081049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 29373204 - 29373252
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctg 280  Q
    |||||||||||||| || |||||||   |||||||||||||||||||||    
T  29373204 ctttgaaatacatccctgtaaaaaaaaatttgtttgaaaaaggtccctg 29373252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Original strand, 36005304 - 36005332
Alignment:
Q  260 tttgtttgaaaaaggtccctgaccccact 288  Q
    |||||||||||||||||||||||||||||    
T  36005304 tttgtttgaaaaaggtccctgaccccact 36005332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 37910793 - 37910741
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||| ||  |||| || |||||||||||| |||||||||||||||||    
T  37910793 gcttaaatatcattttcgtccccgtaatttggatccgttttgattttcgtccc 37910741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 43379770 - 43379822
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||| ||| ||||||||||    |||||||||||||||||||    
T  43379770 gcttaaatatgataaacgtccctgtaatttttgacagttttgattttcgtccc 43379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 46727929 - 46727981
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||| ||  ||| |||||||  |||||||||||||||||||    
T  46727929 gcttaaatatgataatagtcactggaatttgggacagttttgattttcgtccc 46727981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 51994771 - 51994719
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| | |||||||||| ||| ||||||||||||||||    
T  51994771 gcttaaatatgatgttcgtacttgtaatttgggtcaattttgattttcgtccc 51994719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 292
Target Start/End: Original strand, 42093429 - 42093552
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtttg 267  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||  |          ||||||||||||||||| |||||||    |||||||    
T  42093429 ttaaatatgataatcgtccctgtaatttgaaccagttttgattttcgtccctgtaaaaaaaaa-ctttgaaatacatctctgtaaaaaaaaaattgtttg 42093527  T
Q  268 aaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||||||||||||||    
T  42093528 aaaaaggtccctgaccccacttcat 42093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19389337 - 19389285
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19389337 ctatttttatccccttatccaatgccccaagggcaatggttagcattctccta 19389285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 18808953 - 18809000
Alignment:
Q  5 ttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18808953 ttttatccccttatccaatgccccaagggcaatggttaacattatcct 18809000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 7601767 - 7601715
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  7601767 gcttaaatatgataatcgtccctgtaatttgggccagttttgattttcgtccc 7601715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 30427081 - 30427132
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  30427081 gcttaaatatgataatcgtccctgtaatttggttcagtttttattttcgtcc 30427132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 32637333 - 32637387
Alignment:
Q  233 tttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||| |||||||| |||||||  |||||||||||||||||||||||||||||    
T  32637333 tttgaaaaacatctctgtaaaaaaaattttgtttgaaaaaggtccctgaccccac 32637387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 40784809 - 40784859
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  40784809 ttaaatatgataatcgtccctgtaatttggtccagttttgattttcgtccc 40784859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45338086 - 45338135
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    ||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  45338086 ctatttttatccccttatccaatgcccaaaggacaatggttagcattctc 45338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 11596631 - 11596579
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||| |||||| || |||||||||| |||||||||||||||||||    
T  11596631 gcttaaatatgagaatcgtcccagtaatttggaccagttttgattttcgtccc 11596579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21016316 - 21016368
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||||||||||||| ||||||| ||||||||||| |||| |||||    
T  21016316 ctatttttatccccttatccaaagccccaaaggcaatggttagcattatccta 21016368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 39529621 - 39529569
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  | || |||||||||||||||||||||||||||||||||    
T  39529621 gcttaaatatgatttttgtccctgtaatttggatcagttttgattttcgtccc 39529569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 14446108 - 14445983
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    ||||||||||||||||||| ||||||||||||  || ||||||||||| ||||  |          ||||||||||||||  | |||||||   ||||||    
T  14446108 gcttaaatatgataatcgtccctgtaatttgggccaattttgattttcatccccgtaaaaaaaaaactttgaaatacatccttgtaaaaaaaaatttgtt 14446009  T
Q  266 tgaaaaaggtccctgaccccacttca 291  Q
    |||||||||||| || ||||||||||    
T  14446008 tgaaaaaggtccttggccccacttca 14445983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21016084 - 21016033
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  21016084 ctatttttatccccttatccaaagcctcaaaggcaatggttagcattctcct 21016033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 35930219 - 35930270
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||||  |||||||||||| |||||||||||||||| ||||||||||    
T  35930219 tatttttatcttcttatccaatgctccaagggcaatggttatcattctccta 35930270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 35627107 - 35627058
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgt 215  Q
    ||||||| |||||  |||| ||||||||||||||||||||||||||||||    
T  35627107 gcttaaacatgattttcgtccctgtaatttggatcagttttgattttcgt 35627058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 5129481 - 5129433
Alignment:
Q  3 atttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||||||||    
T  5129481 atttttatccccttatcaaatgctctaagggcaatggttagcattctcc 5129433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 30136711 - 30136651
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||| || |||||||    ||||||||||||||||| ||||||||||||||    
T  30136711 ctttgaaatacatccctgtaaaaaaaaaattgtttgaaaaaggtccatgaccccacttcat 30136651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 36187240 - 36187188
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| |||||||||| ||||||||||||||||| ||||    
T  36187240 gcttaaatatgattttcgtccctgtaatttagatcagttttgattttcatccc 36187188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 39528864 - 39528916
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| |||||||||||| |||||||||||||| |||||    
T  39528864 gcttaaatatgattttcgtccctgtaatttgggtcagttttgatttttgtccc 39528916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 41723209 - 41723261
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||| ||||||    
T  41723209 gcttaaatatgataatcgtccctgtaatttggtcaagttttgatttccgtccc 41723261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4990015 - 4990066
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||||  ||||| ||||| ||| |||||||||    
T  4990015 ctatttttatccccttatccaatgctacaaggacaatgattagcattctcct 4990066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 287
Target Start/End: Original strand, 24700422 - 24700543
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    |||||||||||||| | || |||||||||||| || ||||||| |||||||||  |          ||||||| |||||| || |||||||    |||||    
T  24700422 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccctgtaaaaaaaaaactttgaattacatccctgtaaaaaaaaaattgtt 24700521  T
Q  266 tgaaaaaggtccctgaccccac 287  Q
    ||||||||||||||||||||||    
T  24700522 tgaaaaaggtccctgaccccac 24700543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 5876197 - 5876148
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgt 215  Q
    |||||||||||||  | |||||| ||||||||| ||||||||||||||||    
T  5876197 gcttaaatatgatttttgttcctctaatttggaccagttttgattttcgt 5876148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 22488798 - 22488765
Alignment:
Q  19 ccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||| |||||||||    
T  22488798 ccaatgccccaagggcaatggttagcattctcct 22488765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Complemental strand, 24701093 - 24701064
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||||||||||||||||||||||||||    
T  24701093 tttttgtttgaaaaaggtccctgaccccac 24701064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 37321157 - 37321194
Alignment:
Q  181 tcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  37321157 tcgttgctgtaatttcgatcagttttgattttcgtccc 37321194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 5339868 - 5339920
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | || |||||||||||| || ||||||| |||||||||    
T  5339868 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccc 5339920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 7601694 - 7601634
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||| || |||||||    |||||||||||||||| ||| |||||||||||    
T  7601694 ctttgaaatacatccctgtaaaaaaaaaattgtttgaaaaaggtctctggccccacttcat 7601634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 10499858 - 10499910
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | || |||||||||||| || ||||||| |||||||||    
T  10499858 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccc 10499910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 15224752 - 15224804
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||||  | |||||||||||||||||    
T  15224752 gcttaaatatgattttcgtccctgtaatttgggcccgttttgattttcgtccc 15224804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 27982317 - 27982289
Alignment:
Q  19 ccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||||||||||||||||||||||    
T  27982317 ccaatgccccaagggcaatggttaacatt 27982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 28039619 - 28039591
Alignment:
Q  19 ccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||||||||||||||||||||||    
T  28039619 ccaatgccccaagggcaatggttaacatt 28039591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 36186547 - 36186603
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccact 288  Q
    |||||||| ||||||||||||||||    |||||||||||||||| ||| |||||||    
T  36186547 ctttgaaaaacatctctataaaaaaaaaattgtttgaaaaaggtctctggccccact 36186603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 37727102 - 37727154
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| | |||||||| || |||||||||||||||||||    
T  37727102 gcttaaatatgattttcgtccatgtaatttagaccagttttgattttcgtccc 37727154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 41723988 - 41723928
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||| || |||||||  ||||  |||||||||||| ||| |||||||||||    
T  41723988 ctttgaaatacatccctgtaaaaaaaattttaattgaaaaaggtctctggccccacttcat 41723928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 40366260 - 40366385
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||  |          ||||||||||| || || |||||||    |||||    
T  40366260 gcttaaatatgataatcgtccctgtaatttgggtcagttttgattttcgtccctgtaaaaaaagaactttgaaatacttccctgtaaaaaa-aaattgtt 40366358  T
Q  266 tgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||||||||||||||||    
T  40366359 tgaaaaaggtccctgaccccacttcat 40366385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 19432601 - 19432549
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  19432601 gcttaaatatgataatcgttcctgtaatttggttcagttttgatttttgtccc 19432549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4421991 - 4421942
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  4421991 ctatttttatcctcttatccaatgccctaagggcaatggttaacattctc 4421942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 16899910 - 16899962
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  16899910 gcttaaatatgataatcgtccctgtaatttggtccagttttgattttcgtccc 16899962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 39567986 - 39568034
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  39567986 tatttttatcccattatccaatgccccaagggcaatggttatcattctc 39568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 338790 - 338739
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||||    
T  338790 tatttttatccctttatccaatgccccaagggcaatggttaggattctccta 338739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35653282 - 35653236
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  35653282 ctatttttatccccttatccaatgcaccaagggcaatggttagcatt 35653236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 3098306 - 3098355
Alignment:
Q  167 cttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  3098306 cttaaatatgataatcgtccctgtaatttaggtcagttttgattttcgtc 3098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16315561 - 16315510
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||| |||||| ||||||| |||||| |||||||||    
T  16315561 ctatttttatccccttatccgatgcccaaagggcagtggttagcattctcct 16315510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 31558239 - 31558290
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||||    
T  31558239 gcttaaatatgataatcgtcactgtaatttgagtcagttttgattttcgtcc 31558290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 6895256 - 6895206
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| | ||||||||||  |||||||||||||||||||    
T  6895256 ttaaatatgataatcgtccttgtaatttggtccagttttgattttcgtccc 6895206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15915914 - 15915960
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||| |||||||||||||||||||| |||||||||| ||||    
T  15915914 ctatttttattcccttatccaatgccccaagtgcaatggttagcatt 15915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 32694763 - 32694705
Alignment:
Q  234 ttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||| || |||||||    ||||||||||||||||||||||||||||||||    
T  32694763 ttgaaatacatccctgtaaaaaaaaaattgtttgaaaaaggtccctgaccccacttcat 32694705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28143150 - 28143101
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    ||||||||||| |||||| ||||| ||||||||||||||||| |||||||    
T  28143150 ctatttttatctccttattcaatgtcccaagggcaatggttagcattctc 28143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 104956 - 104904
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||  |||||||||||| ||||||| |||||||||| ||||||||||    
T  104956 ctatttttactcccttatccaataccccaagagcaatggttagcattctccta 104904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 3099147 - 3099095
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| | ||||||||||  ||||||| |||||||||||    
T  3099147 gcttaaatatgataatcgtccatgtaatttggtccagttttaattttcgtccc 3099095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 8410225 - 8410273
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||||||||| ||| |||||| ||||||||||| |||||||    
T  8410225 tatttttatccccttatctaataccccaaaggcaatggttagcattctc 8410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 31559094 - 31559042
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||||||  ||||||||| |  |||||||||||||||||||    
T  31559094 gcttaaatatgataatcgtcactgtaattttggccagttttgattttcgtccc 31559042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 25017318 - 25017283
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaa 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  25017318 ctatttttatccccttatccaatgcctcaagggcaa 25017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34546860 - 34546911
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||| | |||||| ||||| ||| |||||||||    
T  34546860 ctatttttatccccttatccaatactccaaggacaatgattatcattctcct 34546911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 292
Target Start/End: Complemental strand, 39084276 - 39084245
Alignment:
Q  261 ttgtttgaaaaaggtccctgaccccacttcat 292  Q
    ||||||||||||||||||||||||||||||||    
T  39084276 ttgtttgaaaaaggtccctgaccccacttcat 39084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 40099422 - 40099461
Alignment:
Q  10 tccccttatccaatgccccaagggcaatggttaacattct 49  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  40099422 tccccttatccaatgccacaaggacaatggttaacattct 40099461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 32694830 - 32694780
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    ||||||||||||||||||  |||||| |||||  |||||||||||||||||    
T  32694830 gcttaaatatgataatcgcccctgtagtttgggccagttttgattttcgtc 32694780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35945328 - 35945378
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||| |||||||||||| ||||||| |||||| ||| ||||||||    
T  35945328 ctatttttattcccttatccaataccccaagagcaatgattagcattctcc 35945378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 39084370 - 39084320
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| ||| ||||||||  || ||||||||||||||||    
T  39084370 ttaaatatgataatcgtccctctaatttgggccaattttgattttcgtccc 39084320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 11120302 - 11120331
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||||||||||||||||||||||||||    
T  11120302 tttttgtttgaaaaaggtccctgaccccac 11120331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Complemental strand, 19825513 - 19825485
Alignment:
Q  260 tttgtttgaaaaaggtccctgaccccact 288  Q
    |||||||||||||||||||||||||||||    
T  19825513 tttgtttgaaaaaggtccctgaccccact 19825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 38914334 - 38914282
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||| |||||| || |||||||||||||||||||    
T  38914334 gcttaaatatgattttcgtccctataatttagaccagttttgattttcgtccc 38914282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 55669821 - 55669873
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55669821 ctatttttatccccttatccaatgccccaagggcaatggttagcattctccta 55669873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35808423 - 35808372
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35808423 ctatttttatccccttatccaatgccccaagggcaatggttagcattctcct 35808372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26040387 - 26040336
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26040387 ctatttttatccccttatccaatgccccaaggacaatggttagcattctcct 26040336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27839333 - 27839283
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  27839333 ctatttttattcccttatccaatgccccaagggcaatggttagcattctcc 27839283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 2362714 - 2362763
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  2362714 tatttttatccccttatccgatgccccaagggcaatggttagcattctcc 2362763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 865416 - 865468
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  865416 gcttaaatatgataatcatccctgtaatttgggtcagttttgattttcgtccc 865468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41956240 - 41956188
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  41956240 ctatttttatcctcttatccgatgccccaagggcaatggttagcattctccta 41956188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 31487804 - 31487851
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattct 49  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  31487804 tatttttatccccttattcaatgctccaagggcaatggttaacattct 31487851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 34316748 - 34316697
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  34316748 tatttttatctccttatccaatgccccaagggcaatggtgagcattctccta 34316697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 31755021 - 31755071
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  31755021 tatttttatccccttatccaataccccaatggcaatggttagcattctcct 31755071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 54110539 - 54110489
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  54110539 ttaaatatgataatcgtccctgtaatttgtttcagttttgattttcgtccc 54110489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29517892 - 29517840
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||| |||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  29517892 gctttaatatgataatcgtccctgtaatttggttcaattttgattttcgtccc 29517840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 51290516 - 51290564
Alignment:
Q  5 ttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  51290516 ttttatccccttatccaatgtcccaaggacaatggttagcattctccta 51290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 9170744 - 9170694
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| |||| |||||  |||||||||||||||||||    
T  9170744 ttaaatatgataatcgttcttgtattttggtccagttttgattttcgtccc 9170694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 11701736 - 11701690
Alignment:
Q  171 aatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  11701736 aatattataatcgtccctgtaatttggaccagttttgattttcgtcc 11701690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16560021 - 16559975
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||| || |||||||||||||||||||||||||||| ||||    
T  16560021 ctatttttattcctttatccaatgccccaagggcaatggttagcatt 16559975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19328774 - 19328724
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||||    
T  19328774 ctatttttatccccttatccaatgccctaagaacaatggttagcattctcc 19328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32131224 - 32131274
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||| | ||||||||||  |||||||||||||||||||||||||    
T  32131224 ctatttttatctctttatccaatgttccaagggcaatggttaacattctcc 32131274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34016707 - 34016757
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||||||||||| | ||||| ||||||||| ||||||||    
T  34016707 ctatttttatccccttatccaatgtctcaaggacaatggttagcattctcc 34016757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 46695988 - 46695938
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||| |||||||||| |||||| |||||| ||||||||||||||    
T  46695988 tatttttatccacttatccaataccccaaaggcaatagttaacattctcct 46695938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 288
Target Start/End: Complemental strand, 29144907 - 29144786
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatc-agttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgt 264  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||||||||||||  |          |||||||||||||| || |||||||    ||||    
T  29144907 gcttaaatatgataatcgtccctgtaattt-gatcaaattttgattttcgtccctgtgaaaaaaaaactttgaaatacatccctgtaaaaaa-aaattgt 29144810  T
Q  265 ttgaaaaaggtccctgaccccact 288  Q
    ||||||||||||||||||||||||    
T  29144809 ttgaaaaaggtccctgaccccact 29144786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 39263627 - 39263676
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgt 215  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||||||||    
T  39263627 gcttaaatatgattttcgtccctgtaatttggaccagttttgattttcgt 39263676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 44876066 - 44876190
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    |||||||||||||||| |||| |||||||||| ||||||||| ||||||| ||  |          |||||||||||||| || |||||||    |||||    
T  44876066 gcttaaatatgataattgttcttgtaatttgggtcagttttgcttttcgttcc--tgtaaaaaaaactttgaaatacatccctgtaaaaaaaaaattgtt 44876163  T
Q  266 tgaaaaaggtccctgaccccacttcat 292  Q
    ||||||||||| ||| |||||||||||    
T  44876164 tgaaaaaggtctctggccccacttcat 44876190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 47864564 - 47864617
Alignment:
Q  240 tacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcatt 293  Q
    |||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||    
T  47864564 tacatccctgtaaaaaaatttttgttttaaaaaggtccctggccccacttcatt 47864617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 52477719 - 52477772
Alignment:
Q  240 tacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcatt 293  Q
    |||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||    
T  52477719 tacatccctgtaaaaaaatttttgttttaaaaaggtccctggccccacttcatt 52477772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 572229 - 572177
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||| || ||| ||||||||  |||||||||||||||||||    
T  572229 gcttaaatatgataattgtccctataatttggtccagttttgattttcgtccc 572177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 23765662 - 23765710
Alignment:
Q  3 atttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  23765662 atttttatccccttatctaatgcaccaaaggcaatggttagcattctcc 23765710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29145295 - 29145243
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||||||||||||   | ||||||||||||||||    
T  29145295 gcttaaatatgataatcgtccctgtaatttggtcaaattttgattttcgtccc 29145243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 54339195 - 54339243
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||| |||||||||||||||| | ||||||||| |||||||    
T  54339195 tatttttatccctttatccaatgccccaacgacaatggttagcattctc 54339243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 53534958 - 53535013
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||| |||||| || |||||||   ||||||||||||||||||||||||||||    
T  53534958 ctttgaattacatccctgtaaaaaaaaatttgtttgaaaaaggtccctgaccccac 53535013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 288
Target Start/End: Complemental strand, 572136 - 572106
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccact 288  Q
    |||||||||||||||||||||||||||||||    
T  572136 tttttgtttgaaaaaggtccctgaccccact 572106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 4730658 - 4730692
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    ||||||||||||||||||| |||||||||||||||    
T  4730658 tttttgtttgaaaaaggtctctgaccccacttcat 4730692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 6056410 - 6056460
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    ||||||||||||||||||| ||| |||||| |  |||||||||||||||||    
T  6056410 gcttaaatatgataatcgtccctataatttagggcagttttgattttcgtc 6056460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19876210 - 19876160
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||||||||||||  |||||| ||| |||| ||||||||    
T  19876210 ctatttttatccccttatccaatgcttcaagggtaattgttagcattctcc 19876160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 24573795 - 24573853
Alignment:
Q  234 ttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||| ||  ||||||   ||||||||||||||||||||| |||||||||||    
T  24573795 ttgaaatacatccctgcaaaaaaaaatttgtttgaaaaaggtccctggccccacttcat 24573853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26831813 - 26831763
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||| ||||| ||||||||||||| |||| |||| ||||||||    
T  26831813 ctatttttatcctcttattcaatgccccaaggacaattgttagcattctcc 26831763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 30475508 - 30475554
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattc 48  Q
    |||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  30475508 tatttttatctccttatccaataccctaagggcaatggttagcattc 30475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31168216 - 31168266
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||| || ||||| ||||||||||| |||| ||||||||    
T  31168216 ctatttttatccccttgtctaatgctccaagggcaatagttagcattctcc 31168266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 38658558 - 38658508
Alignment:
Q  167 cttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    ||||||||||||| | || ||||||||||||||| ||||||| ||||||||    
T  38658558 cttaaatatgatattagtccctgtaatttggatcggttttgaatttcgtcc 38658508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45688825 - 45688871
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    ||||||||||||||||||||||| |||||||  ||||||||| ||||    
T  45688825 ctatttttatccccttatccaataccccaagaacaatggttagcatt 45688871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 46620227 - 46620173
Alignment:
Q  233 tttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||| ||||| ||||||||||   ||||||||||||||||||||| ||||||    
T  46620227 tttgaaaaacatccctataaaaaaaaatttgtttgaaaaaggtccctggccccac 46620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 866328 - 866279
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    ||||||||||||||||| |||||||||| |   |||||||||||||||||    
T  866328 ttaaatatgataatcgtccctgtaatttagtctagttttgattttcgtcc 866279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 16836306 - 16836335
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||||||||||||||||||||||||||    
T  16836306 tttttgtttgaaaaaggtccctgaccccac 16836335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 34334663 - 34334626
Alignment:
Q  15 ttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  34334663 ttatccaatgcctcaagagcaatggttaacattctcct 34334626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Complemental strand, 42712102 - 42712065
Alignment:
Q  253 aaaagtttttgtttgaaaaaggtccctgaccccacttc 290  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  42712102 aaaattttttgtttgaaaaaggtccctggccccacttc 42712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 42712189 - 42712140
Alignment:
Q  169 taaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||| |||| | ||||||||||| ||||||||||||| |||||    
T  42712189 taaatatgatagtcgtccttgtaatttggaccagttttgatttttgtccc 42712140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 54400291 - 54400336
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    ||||||||| || |||||||||||||| ||||||||||||| ||||    
T  54400291 tatttttattcctttatccaatgccccgagggcaatggttagcatt 54400336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 6711172 - 6711120
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  | || ||||||||||||| ||||||||| |||||||||    
T  6711172 gcttaaatatgatttttgtccctgtaatttggaccagttttgaatttcgtccc 6711120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 9693408 - 9693368
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggtta 42  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  9693408 tatttttatccccttatccaatgcgccaaagacaatggtta 9693368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 38657828 - 38657880
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| |||||||||||| |  |||||||||||||||||    
T  38657828 gcttaaatatgattttcgtccctgtaatttgggttcgttttgattttcgtccc 38657880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 42711518 - 42711554
Alignment:
Q  253 aaaagtttttgtttgaaaaaggtccctgaccccactt 289  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  42711518 aaaattttttgtttgaaaaaggtccctggccccactt 42711554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 48615278 - 48615226
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| |||| | |||||||||||  ||||||||||||| ||||    
T  48615278 gcttaaatatgatattcgtccatgtaatttggacgagttttgattttcatccc 48615226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 51162970 - 51162918
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| | |||||||||| || |||||||||||||||||    
T  51162970 gcttaaatatgattttcgtccttgtaatttgggtccgttttgattttcgtccc 51162918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 53119627 - 53119583
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgatttt 212  Q
    ||||||||||||||||||||||||||| |  ||| ||||||||||    
T  53119627 ttaaatatgataatcgttcctgtaattggattcaattttgatttt 53119583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 23685689 - 23685637
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcctac 54  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23685689 tatttttatccctttatccaatgccccaagggcaatggttaacattctcctac 23685637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 765177 - 765126
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  765177 ctatttttatccccttatccaatgccccaagggcaatggttagcattctcct 765126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39401562 - 39401511
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39401562 ctatttttatccccttatccaatgccccaagggcaatggttagcattctcct 39401511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 2075674 - 2075799
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||            |||||||||||| ||  ||||||  ||| |||    
T  2075674 gcttaaatatgataatcgtccctgtaatttaggtcagttttgattttcgtccctataaaaaaaaaaaattgaaatacatccctgcaaaaaaaattt-gtt 2075772  T
Q  266 tgaaaaaggtccctgaccccacttcat 292  Q
    ||||||||||| |||||||||||||||    
T  2075773 tgaaaaaggtctctgaccccacttcat 2075799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 27495206 - 27495257
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  27495206 tatttttatccccttattcaatgccccaagtgcaatggttagcattctccta 27495257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 39233989 - 39233938
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  39233989 gcttaaatatgataatcgtccctgtaatttggttcaattttgattttcgtcc 39233938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 44075836 - 44075886
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  44075836 gcttaaatatgataatcgtccctgtaatttggtccagttttgattttcgtc 44075886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 4023353 - 4023398
Alignment:
Q  6 tttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  4023353 tttatccccttattcaatgccccaaggacaatggttaacattctcc 4023398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 11735779 - 11735722
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccactt 289  Q
    ||||||||  |||| || |||||||||||||||||||||||||||| |||||||||||    
T  11735779 ctttgaaaatcatccctgtaaaaaagtttttgtttgaaaaaggtccatgaccccactt 11735722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 17056082 - 17056033
Alignment:
Q  4 tttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  17056082 tttttatccctttatccaatgccctaagggcaatggttagcattctccta 17056033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 17068529 - 17068480
Alignment:
Q  4 tttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  17068529 tttttatccctttatccaatgccctaagggcaatggttagcattctccta 17068480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1321250 - 1321302
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||| |||||||||||| |||||| ||||||||| ||||||||||    
T  1321250 ctatttttatcctcttatccaatgctccaaggacaatggttagcattctccta 1321302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 3834927 - 3834979
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||||    
T  3834927 gcttaaatatgataatcgtccctgtaatttggtctagttttgattttcgtccc 3834979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 5429050 - 5429102
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||| ||| || |||||||||||| ||||||||||||||||||||    
T  5429050 gcttaaatatgaaaattgtccctgtaatttggttcagttttgattttcgtccc 5429102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 16011366 - 16011418
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||||| |||||||| |  |||||||||||||||||||    
T  16011366 gcttaaatatgataatcgttcttgtaatttagtccagttttgattttcgtccc 16011418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17074515 - 17074463
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||||||| ||||| ||||||| |||||||||||||| ||||||||||    
T  17074515 ctatttttatccctttatctaatgccctaagggcaatggttagcattctccta 17074463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 18234191 - 18234243
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  18234191 gcttaaatatgatattcgtctctgtaatttggaccagttttgattttcgtccc 18234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 33726463 - 33726498
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaat 37  Q
    ||||||||||||||||||||||||||||||||||||    
T  33726463 tatttttatccccttatccaatgccccaagggcaat 33726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 914381 - 914427
Alignment:
Q  167 cttaaatatgataatcgttcctgtaatttggatcagttttgattttc 213  Q
    |||||||||||||||||| |||||||||| | |||||||||||||||    
T  914381 cttaaatatgataatcgtccctgtaatttaggtcagttttgattttc 914427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 33864438 - 33864488
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||| ||||| ||||| | |||||||||||||||||||||||||    
T  33864438 tatttttatcctcttattcaatgtctcaagggcaatggttaacattctcct 33864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 19281793 - 19281850
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccactt 289  Q
    |||||||| ||||| || |||||   ||||||||||||||||||||||||||||||||    
T  19281793 ctttgaaaaacatccctgtaaaactttttttgtttgaaaaaggtccctgaccccactt 19281850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 5429855 - 5429803
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||| ||||||||  || ||||||||||||||||    
T  5429855 gcttaaatatgataatcgtccctataatttggtccaattttgattttcgtccc 5429803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 15994539 - 15994487
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| | | |||||||  ||||||||||||||||||||    
T  15994539 gcttaaatatgataatcgtccatataatttgagtcagttttgattttcgtccc 15994487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17095094 - 17095042
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||||||| ||||||||||||| |||  ||||||||| ||||||||||    
T  17095094 ctatttttatccctttatccaatgccctaagaacaatggttagcattctccta 17095042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 28783899 - 28783931
Alignment:
Q  260 tttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||||||||||||||||||||||||||||    
T  28783899 tttgtttgaaaaaggtccctgaccccacttcat 28783931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 2215093 - 2215046
Alignment:
Q  170 aaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||    
T  2215093 aaatataataatcgtccctgtaatttgggccagttttgattttcgtcc 2215046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 4069609 - 4069659
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    |||||||||||||||| || ||| |||||||| |||||||| |||||||||    
T  4069609 gcttaaatatgataattgtccctataatttgggtcagttttaattttcgtc 4069659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16361648 - 16361694
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||| |||||||||||||| ||||||||||| |||| ||||    
T  16361648 ctatttttattcccttatccaatgctccaagggcaattgttagcatt 16361694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39085819 - 39085773
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacatt 47  Q
    ||||||||||||| |||||||||| |||||| |||||||||| ||||    
T  39085819 ctatttttatccctttatccaatgtcccaagagcaatggttagcatt 39085773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17603893 - 17603930
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatg 38  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  17603893 ctatttttatcgcgttatccaatgccccaagggcaatg 17603930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 31921240 - 31921207
Alignment:
Q  19 ccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||| ||||||||||||||||||||||||    
T  31921240 ccaatgccctaagggcaatggttaacattctcct 31921207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 168708 - 168680
Alignment:
Q  19 ccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||||||||||||||||||||||    
T  168708 ccaatgccccaagggcaatggttaacatt 168680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 862671 - 862719
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattct 49  Q
    ||||||||||||| |||| |||||||| ||||||||| |||| ||||||    
T  862671 ctatttttatcccattattcaatgccctaagggcaattgttagcattct 862719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2966622 - 2966674
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||||||||||||||| ||| ||   |||||||| ||||||||||    
T  2966622 ctatttttatccccttatccaatgtccccagataaatggttagcattctccta 2966674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 8873686 - 8873738
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||||| | ||||| |||||||||||    
T  8873686 gcttaaatatgattttcgtccctgtaatttggacccgttttaattttcgtccc 8873738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 9991453 - 9991421
Alignment:
Q  15 ttatccaatgccccaagggcaatggttaacatt 47  Q
    |||||||||||||||||||||||||||| ||||    
T  9991453 ttatccaatgccccaagggcaatggttagcatt 9991421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 26241073 - 26241021
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | || |||||||||||| || ||||||| |||||||||    
T  26241073 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccc 26241021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 26882796 - 26882744
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| | |||||||||| || |||||||||||||||||    
T  26882796 gcttaaatatgattttcgtccatgtaatttgggtccgttttgattttcgtccc 26882744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 28784875 - 28784823
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||| ||||||||  |||||||||||   ||||||||||||||||||    
T  28784875 gcttaaatattataatcgtctctgtaatttggtcaagttttgattttcgtccc 28784823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 35445316 - 35445276
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggtta 42  Q
    ||||||||||||||||| |||||||| ||||| ||||||||    
T  35445316 tatttttatccccttattcaatgccctaagggtaatggtta 35445276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41346356 - 41346407
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41346356 ctatttttatccccttatccaatgccccaaggacaatggttaacattctcct 41346407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 29915601 - 29915551
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  29915601 tatttttatccccttatccaacgccccaagggcaatggttagcattctcct 29915551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 29964754 - 29964704
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  29964754 tatttttatccccttatccaacgccccaagggcaatggttagcattctcct 29964704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 54280853 - 54280905
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  54280853 gcttaaatatgataatcgtccctgtaatttggtccagttttgattttcgtccc 54280905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32415651 - 32415702
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  32415651 ctatttttatccctttatccaatgcctcaagggcaatgattaacattctcct 32415702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 36730179 - 36730128
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  36730179 tatttttatccccttatccaatgccataagggcaatggttagcattctccta 36730128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 37509195 - 37509242
Alignment:
Q  3 atttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  37509195 atttttatccccttatccaatgccccaaaggcaatggttagcattctc 37509242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 54295153 - 54295102
Alignment:
Q  167 cttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  54295153 cttaaatatgataatcgtccatgtaatttgggtcagttttgattttcgtccc 54295102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1803970 - 1804020
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  1803970 ctatttttatccccttatccaatgccccaaggacaatgattagcattctcc 1804020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 4996371 - 4996423
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | ||||||||||||||| |||||||||| |||||||||    
T  4996371 gcttaaatatgatattagttcctgtaatttgggtcagttttgaatttcgtccc 4996423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 21103662 - 21103610
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||||| |||||||||||||||||||    
T  21103662 gcttaaatatgattttcgtccctgtaatttggaccagttttgattttcgtccc 21103610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 42489338 - 42489286
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||| || | |||||||||| ||||||||||||||||||||    
T  42489338 gcttaaatatgataattgtccttgtaatttgggtcagttttgattttcgtccc 42489286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 10854953 - 10854992
Alignment:
Q  9 atccccttatccaatgccccaagggcaatggttaacattc 48  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  10854953 atccccttatccaatgccccaagggcaatgattaacattc 10854992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25102349 - 25102298
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||| | |||||||||| ||||||||||||||||| |||||||||    
T  25102349 ctatttttatctcattatccaatgtcccaagggcaatggttagcattctcct 25102298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 43656272 - 43656221
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    ||||||||||||||||||| | ||||||||||  ||||||||||||||||||    
T  43656272 gcttaaatatgataatcgtccttgtaatttgggacagttttgattttcgtcc 43656221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48136750 - 48136699
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||| |||||||||||| |||||||| ||||||||| |||||||||    
T  48136750 ctatttttattcccttatccaataccccaaggacaatggttagcattctcct 48136699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 53427408 - 53427455
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttc 213  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||    
T  53427408 gcttaaatatgatagtcgttcctgtaatttagttcagttttgattttc 53427455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8847479 - 8847429
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||||||||||| |||||| |||||| | ||||||||||    
T  8847479 ctatttttatccccttatccaatgtcccaagtgcaatgataaacattctcc 8847429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 41354414 - 41354464
Alignment:
Q  167 cttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    |||||||||||||||||||   ||||||||||| |||||||||||||||||    
T  41354414 cttaaatatgataatcgtttaagtaatttggataagttttgattttcgtcc 41354464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44570413 - 44570363
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||| ||||| ||||| |||||||||||||||||||||| ||||||||    
T  44570413 ctattttgatccctttatcgaatgccccaagggcaatggttagcattctcc 44570363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 290
Target Start/End: Complemental strand, 11058499 - 11058378
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    |||||||||||||  |||| |||||||||| ||||||||||||||| ||||||  |          |||||||| ||||| ||||||||||    |||||    
T  11058499 gcttaaatatgattttcgtccctgtaatttagatcagttttgatttccgtccctgt---aaaaaaactttgaaaaacatccctataaaaaaaaaattgtt 11058403  T
Q  266 tgaaaaaggtccctgaccccacttc 290  Q
    ||||||||||||||| |||||||||    
T  11058402 tgaaaaaggtccctggccccacttc 11058378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35306414 - 35306455
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggtta 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  35306414 ctatttttatccccttatccaattgcccaagggcaatggtta 35306455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 42121796 - 42121747
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgt 215  Q
    ||||||||||||||||||| ||| ||||||||| ||||||| ||||||||    
T  42121796 gcttaaatatgataatcgtccctataatttggaccagttttaattttcgt 42121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 53428023 - 53427978
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattt 211  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||    
T  53428023 gcttaaatatgataatcgtttctgtaatttggtccagttttgattt 53427978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 31090674 - 31090726
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||||| | |||||||||||||||||    
T  31090674 gcttaaatatgattttcgtccctgtaatttggacccgttttgattttcgtccc 31090726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 288
Target Start/End: Complemental strand, 41780453 - 41780331
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtt 265  Q
    |||||||||||||  |||| ||||||||||||| | ||||||||||| |||||  |           ||||||| ||||| ||  |||||| ||||||||    
T  41780453 gcttaaatatgattttcgtccctgtaatttggacccgttttgatttttgtccctgtagaaaaaaaagtttgaaaaacatccctgcaaaaaaatttttgtt 41780354  T
Q  266 tgaaaaaggtccctgaccccact 288  Q
    ||||||||||||||| |||||||    
T  41780353 tgaaaaaggtccctggccccact 41780331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 42488454 - 42488502
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtc 216  Q
    ||||||||||||||| | |||||||||||  ||||||||||||||||||    
T  42488454 ttaaatatgataatcatccctgtaatttgagtcagttttgattttcgtc 42488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 44706911 - 44706963
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| |||||||||||| || |||||||||||||||||    
T  44706911 gcttaaatatgattttcgtccctgtaatttgggtccgttttgattttcgtccc 44706963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 54281756 - 54281704
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||||||||| ||||||  ||  |||||||||||||||    
T  54281756 gcttaaatatgataatcgttcctgttatttgggccaaatttgattttcgtccc 54281704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 21102671 - 21102726
Alignment:
Q  234 ttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccactt 289  Q
    |||||| ||||| || |||||||   ||||||||||||||||||||||||||||||    
T  21102671 ttgaaaaacatccctgtaaaaaaaaatttgtttgaaaaaggtccctgaccccactt 21102726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 43655413 - 43655464
Alignment:
Q  241 acatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    |||||||| |||||||   ||||||||||||||||||||| |||||||||||    
T  43655413 acatctctgtaaaaaaaaatttgtttgaaaaaggtccctggccccacttcat 43655464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 53427962 - 53427907
Alignment:
Q  233 tttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccact 288  Q
    ||||||||||||| || ||| |   |||||||||||||||||||||||||||||||    
T  53427962 tttgaaatacatccctgtaatattttttttgtttgaaaaaggtccctgaccccact 53427907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 292
Target Start/End: Complemental strand, 54281655 - 54281624
Alignment:
Q  261 ttgtttgaaaaaggtccctgaccccacttcat 292  Q
    ||||||||||||||||||||||||||||||||    
T  54281655 ttgtttgaaaaaggtccctgaccccacttcat 54281624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4759877 - 4759827
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||| ||||||||||| ||||  |||||||||| ||||||||    
T  4759877 ctatttttatccctttatccaatgctccaaatgcaatggttagcattctcc 4759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 4996888 - 4996834
Alignment:
Q  233 tttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||| ||||| || |||||||   ||||||||||||||||||||||||||||    
T  4996888 tttgaaaaacatccctgtaaaaaaaaatttgtttgaaaaaggtccctgaccccac 4996834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8715528 - 8715479
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||| ||||||||||||||||| |||| ||||||||| ||||||||    
T  8715528 ctattttta-ccccttatccaatgccctaaggacaatggttagcattctcc 8715479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9067415 - 9067366
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||| ||||||||||||||||| |||| ||||||||| ||||||||    
T  9067415 ctattttta-ccccttatccaatgccctaaggacaatggttagcattctcc 9067366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 25166731 - 25166681
Alignment:
Q  240 tacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttc 290  Q
    |||||| || ||||||| ||||||||| ||||||||||||| |||||||||    
T  25166731 tacatccctgtaaaaaaatttttgttttaaaaaggtccctggccccacttc 25166681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 48045698 - 48045648
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||||||||||||||    ||||||||| |||||||    
T  48045698 ttaaatatgataatcgttcctgtaatttggtctcgttttgattgtcgtccc 48045648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 23142821 - 23142858
Alignment:
Q  181 tcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| || |||||||||||||||||    
T  23142821 tcgttcctgtaatttgggtccgttttgattttcgtccc 23142858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Complemental strand, 31091299 - 31091270
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||||||||||||||||||||||||||    
T  31091299 tttttgtttgaaaaaggtccctgaccccac 31091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 43631269 - 43631220
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgt 215  Q
    ||||||||||||||||||| | ||| ||||||  ||||||||||||||||    
T  43631269 gcttaaatatgataatcgtccatgtgatttggtccagttttgattttcgt 43631220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 44695697 - 44695648
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||||||| ||||| | ||||| ||| ||||||||    
T  44695697 tatttttatccccttatccaatgtcccaatgacaatgattagcattctcc 44695648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 23485500 - 23485552
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | || |||||||||||| || ||||||| |||||||||    
T  23485500 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccc 23485552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 25913350 - 25913294
Alignment:
Q  233 tttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccactt 289  Q
    ||||||| |||||  | ||||| | ||||||||||||||||||| ||||||||||||    
T  25913350 tttgaaaaacatccttgtaaaatattttttgtttgaaaaaggtctctgaccccactt 25913294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 41354836 - 41354792
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgatt 210  Q
    ||||||||||||||||||||| |||| |||||  |||||||||||    
T  41354836 gcttaaatatgataatcgttcatgtactttggtccagttttgatt 41354792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 44707608 - 44707556
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||||| |  ||||||||||||||||    
T  44707608 gcttaaatatgattttcgtccctgtaatttggacccattttgattttcgtccc 44707556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 44879047 - 44878995
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | || |||||||||||| || ||||||| |||||||||    
T  44879047 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccc 44878995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48454849 - 48454799
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48454849 ctatttttatccccttatccaatgccccaagggtaatggttaacattctcc 48454799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40763331 - 40763380
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40763331 ctatttttatccccttatccaatgccccaagggcaatggttagcattctc 40763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24359735 - 24359683
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  24359735 ctatttttatccccttatccaatacccgaagggcaatggttaacattctccta 24359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 37796598 - 37796650
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  37796598 gcttaaatatgataatcgtccctgtaatttgggtcagttttgattttcgtccc 37796650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 292
Target Start/End: Original strand, 14419392 - 14419516
Alignment:
Q  168 ttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtttg 267  Q
    ||||||||||||||||| |||||| |||||  |||||||||||||||||||  |          |||||||||||||| || |||||||   ||||||||    
T  14419392 ttaaatatgataatcgtccctgtattttggggcagttttgattttcgtccctgtaaaaaaagaactttgaaatacatccctgtaaaaaaaaatttgtttg 14419491  T
Q  268 aaaaaggtccctgaccccacttcat 292  Q
    |||||||| |||| |||||||||||    
T  14419492 aaaaaggttcctggccccacttcat 14419516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8258670 - 8258621
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  8258670 ctatttttatccccttatccgatgccccaagggcaatagttaacattctc 8258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 288
Target Start/End: Original strand, 32497001 - 32497124
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc-gatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgt 264  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |            |||||||||| ||| || |||||   |||||||    
T  32497001 gcttaaatatgataattgttcctgtaatttgggtcagttttgattttcatccctgtaaaaaaaaaaactttgaaatatatccctgtaaaattatttttgt 32497100  T
Q  265 ttgaaaaaggtccctgaccccact 288  Q
    ||||||||||||||||||||||||    
T  32497101 ttgaaaaaggtccctgaccccact 32497124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 8380524 - 8380571
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattct 49  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8380524 tatttttatccccttatccaataccccaagggccatggttaacattct 8380571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 29034770 - 29034821
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  29034770 tatttttatccccttatccaatgcctcaaggacaatggttagcattctccta 29034821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43567533 - 43567482
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  43567533 ctatttttatctccttatccaatgccccaagggcaatggttagcaatctcct 43567482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 41345489 - 41345437
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||||| ||| ||||||||  |||||||||||||||||||    
T  41345489 gcttaaatatgataatcgtccctataatttggtccagttttgattttcgtccc 41345437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5240359 - 5240310
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    ||||||||||||| |||||||||||| ||||| ||||||||| |||||||    
T  5240359 ctatttttatccctttatccaatgcctcaaggacaatggttagcattctc 5240310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 40193861 - 40193910
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgt 215  Q
    |||||||||||||||||||  ||||||||||| ||| |||||||||||||    
T  40193861 gcttaaatatgataatcgtcgctgtaatttgggtcaattttgattttcgt 40193910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 789299 - 789351
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||||| ||||    
T  789299 gcttaaatatgattttcgtccctgtaatttgggtcagttttgattttcatccc 789351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 17995850 - 17995902
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| |||||||||||| ||| ||||||||||||||||    
T  17995850 gcttaaatatgattttcgtccctgtaatttgggtcaattttgattttcgtccc 17995902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 21985636 - 21985584
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||||| | |||||||||||||||||    
T  21985636 gcttaaatatgattttcgtccctgtaatttggacccgttttgattttcgtccc 21985584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 26828766 - 26828818
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||| || ||||||||||||  |||||||||||||| ||||    
T  26828766 gcttaaatatgataattgtccctgtaatttggtccagttttgattttcttccc 26828818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 48540730 - 48540675
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccact 288  Q
    ||||||| |||||| || ||||||| ||||||||||||||||||||||| |||||||    
T  48540730 ctttgaattacatc-ctgtaaaaaattttttgtttgaaaaaggtccctggccccact 48540675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 41567402 - 41567457
Alignment:
Q  233 tttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccact 288  Q
    ||||||| ||||| || ||||||| ||||||||||||||||||| ||| |||||||    
T  41567402 tttgaaaaacatccctgtaaaaaattttttgtttgaaaaaggtctctggccccact 41567457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 47723536 - 47723485
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    |||||||||||||  |||| ||| ||||||||| ||||||||||||||||||    
T  47723536 gcttaaatatgattttcgtccctataatttggaccagttttgattttcgtcc 47723485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7322980 - 7322930
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||| ||||||||||  | ||||||||||||||| ||||||||    
T  7322980 ctatttttatcctcttatccaatatctcaagggcaatggttagcattctcc 7322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8292827 - 8292877
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||||||||| |||| | ||||| ||| ||||||||    
T  8292827 ctatttttatccccttatccaatgctccaaagacaatgattagcattctcc 8292877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 8408085 - 8408115
Alignment:
Q  259 ttttgtttgaaaaaggtccctgaccccactt 289  Q
    |||||||||||||||||||||||||||||||    
T  8408085 ttttgtttgaaaaaggtccctgaccccactt 8408115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30538507 - 30538457
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||||||||| |||| ||||||| ||||| ||| ||||||||    
T  30538507 ctatttttatccccttatctaatgtcccaaggacaatgattagcattctcc 30538457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 36279202 - 36279252
Alignment:
Q  2 tatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    |||||||||||  ||||||||||||||||| | |||||||| |||||||||    
T  36279202 tatttttatcctattatccaatgccccaagagtaatggttagcattctcct 36279252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 37796690 - 37796724
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccacttcat 292  Q
    ||||||||||||||||||||||| |||||||||||    
T  37796690 tttttgtttgaaaaaggtccctgtccccacttcat 37796724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 26829674 - 26829629
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattt 211  Q
    ||||||||||||||||||| |||||||||| |  ||||||||||||    
T  26829674 gcttaaatatgataatcgtccctgtaatttagtccagttttgattt 26829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 6822605 - 6822657
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||| || ||||||||||||   ||||||| ||||||||||    
T  6822605 gcttaaatatgataattgtccctgtaatttggtcaagttttggttttcgtccc 6822657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 11337039 - 11337091
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | ||||||| ||||||| || ||||||| |||||||||    
T  11337039 gcttaaatatgatattagttcctgcaatttgggtcggttttgaatttcgtccc 11337091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 26585541 - 26585597
Alignment:
Q  232 ctttgaaatacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccact 288  Q
    ||||||| |||||| || |||||||  |||||||||||||||||| ||| |||||||    
T  26585541 ctttgaattacatccctgtaaaaaaaattttgtttgaaaaaggtctctggccccact 26585597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27053520 - 27053468
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctccta 53  Q
    ||||||||||||| ||||||||||||| |||| ||||| |||  |||||||||    
T  27053520 ctatttttatccctttatccaatgccctaaggacaatgattagtattctccta 27053468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 34458908 - 34458856
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||| |  || |||||||| ||| ||||||||||||||||    
T  34458908 gcttaaatatgataatcatctctataatttggttcaattttgattttcgtccc 34458856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 35088398 - 35088426
Alignment:
Q  190 taatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||||||||||||||||||    
T  35088398 taatttggatcagttttgattttcgtccc 35088426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Complemental strand, 46196706 - 46196678
Alignment:
Q  260 tttgtttgaaaaaggtccctgaccccact 288  Q
    |||||||||||||||||||||||||||||    
T  46196706 tttgtttgaaaaaggtccctgaccccact 46196678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 47723442 - 47723410
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccacttc 290  Q
    ||||| |||||||||||||||||||||||||||    
T  47723442 tttttatttgaaaaaggtccctgaccccacttc 47723410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26572109 - 26572059
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  26572109 ctatttttatccccttatccaatgccccaaggacaatggttagcattctcc 26572059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10855514 - 10855562
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattct 49  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  10855514 ctatttttatccccttatcaaatgccccaaggacaatggttagcattct 10855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 292
Target Start/End: Original strand, 3184691 - 3184808
Alignment:
Q  172 atatgataatcgttcctgtaatttggatcagttttgattttcgtcccgatnnnnnnnnnnctttgaaatacatctctataaaaaagtttttgtttgaaaa 271  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||  |           ||||||||||||| ||||||||||    |||||||||||    
T  3184691 atatgataatcgtccctgtaatttggacaagttttgattttcgtccc--tgtaaaaaaaaatttgaaatacatccctataaaaaa-aaattgtttgaaaa 3184787  T
Q  272 aggtccctgaccccacttcat 292  Q
    ||||| |||||||||||||||    
T  3184788 aggtctctgaccccacttcat 3184808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5578356 - 5578407
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||| |||||||||| |||||||||| |||| |||||||||    
T  5578356 ctatttttatcccctcatccaatgcctcaagggcaatagttatcattctcct 5578407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29692368 - 29692318
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||  |||||||||||||||||||||||| ||| ||||||||    
T  29692368 ctatttttatccatttatccaatgccccaagggcaatgattagcattctcc 29692318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32786298 - 32786347
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcc 51  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  32786298 ctatttttatccc-ttatccaataccccaagggcaatggttagcattctcc 32786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 544343 - 544392
Alignment:
Q  169 taaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  544343 taaatatgataatcgtctctgtaatttggtccagttttgattttcgtccc 544392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 2812554 - 2812504
Alignment:
Q  167 cttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    ||||||||||||  |||| ||| |||||| |||||||||||||||||||||    
T  2812554 cttaaatatgattttcgtccctataatttagatcagttttgattttcgtcc 2812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 477013 - 477042
Alignment:
Q  258 tttttgtttgaaaaaggtccctgaccccac 287  Q
    ||||||||||||||||||||||||||||||    
T  477013 tttttgtttgaaaaaggtccctgaccccac 477042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16437617 - 16437568
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctc 50  Q
    |||||||||||| |||||||||||||  ||| |||||||||| |||||||    
T  16437617 ctatttttatccacttatccaatgccttaagagcaatggttagcattctc 16437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 477708 - 477656
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||| | || |||||||||||| || ||||||| |||||||||    
T  477708 gcttaaatatgatattagtccctgtaatttgggtcggttttgaatttcgtccc 477656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 1175161 - 1175109
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  |||| ||||||||||||| | |||||||||||| ||||    
T  1175161 gcttaaatatgattttcgtccctgtaatttggacccgttttgattttcatccc 1175109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 6866998 - 6867026
Alignment:
Q  2 tatttttatccccttatccaatgccccaa 30  Q
    |||||||||||||||||||||||||||||    
T  6866998 tatttttatccccttatccaatgccccaa 6867026  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 32403976 - 32404028
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||||||  | || ||||||||||||| || ||||||||||||||||    
T  32403976 gcttaaatatgatttttgtccctgtaatttggaccacttttgattttcgtccc 32404028  T

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Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16799 - 16748
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  16799 ctatttttatccccttatccaatgccctatgggcaatggttagcattctcct 16748  T

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Target: scaffold0062; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26967 - 26916
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  26967 ctatttttatccccttatccaatgccctatgggcaatggttagcattctcct 26916  T

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Target: scaffold0062; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37133 - 37082
Alignment:
Q  1 ctatttttatccccttatccaatgccccaagggcaatggttaacattctcct 52  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  37133 ctatttttatccccttatccaatgccctatgggcaatggttagcattctcct 37082  T

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Target: scaffold0785 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 1629 - 1578
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtcc 217  Q
    |||||||||||||| | || ||||||||||||||| ||||||| ||||||||    
T  1629 gcttaaatatgatattagtccctgtaatttggatcggttttgaatttcgtcc 1578  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 10381 - 10431
Alignment:
Q  240 tacatctctataaaaaagtttttgtttgaaaaaggtccctgaccccacttc 290  Q
    |||||| || ||||||| ||||||||| ||||||||||||| |||||||||    
T  10381 tacatccctgtaaaaaaatttttgttttaaaaaggtccctggccccacttc 10431  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 28284 - 28336
Alignment:
Q  166 gcttaaatatgataatcgttcctgtaatttggatcagttttgattttcgtccc 218  Q
    |||||||||| ||  |||| || |||||||||||| |||||||||||||||||    
T  28284 gcttaaatatcattttcgtccccgtaatttggatccgttttgattttcgtccc 28336  T

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