View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2717-Insertion-3 (Length: 258)
Name: NF2717-Insertion-3
Description: NF2717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2717-Insertion-3 |
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| [»] chr6 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 7 - 258
Target Start/End: Complemental strand, 33140871 - 33140620
Alignment:
| Q |
7 |
aataatacctctaacaatattaacaccaagtttagcatcatcaaagaagaacacacagattttttcagatgtcttgtttctatgtgttgtgttgatttct |
106 |
Q |
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| T |
33140871 |
aataatacctctaacaatattaacaccaagtttagcatcatcaaagaagaacacacagattttttcagataggttgtttctatgtgttgtgttgatttct |
33140772 |
T |
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| Q |
107 |
aactgttctcgtttcatgtgttcgccgaatttgaagatgaaatcttctcgagacatggtgagttgggtttcgtcgacgaggtagtctctgtcgaatagca |
206 |
Q |
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| T |
33140771 |
aactgttctcgtttcatgtgttcgccgaatttgaagatgaaatcttctcgagacatggtaagttgggtttcgtcgacgaggtagtttctgtcgaatagca |
33140672 |
T |
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| Q |
207 |
tttggagaatggttttgcggattctgtatagttttgttatgtcttcatcggt |
258 |
Q |
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| T |
33140671 |
tttggagaatggttttgcggattctgtatagttttgttatgtcttcttcggt |
33140620 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 7 - 257
Target Start/End: Complemental strand, 33134986 - 33134736
Alignment:
| Q |
7 |
aataatacctctaacaatattaacaccaagtttagcatcatcaaagaagaacacacagattttttcagatgtcttgtttctatgtgttgtgttgatttct |
106 |
Q |
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||||| |||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |
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| T |
33134986 |
aataaaacctctaacaatcttaacaccaagtttagcatcatcagagaagaaaacacagattttttcagatgggttgtttctatgtgttttgttgatttct |
33134887 |
T |
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| Q |
107 |
aactgttctcgtttcatgtgttcgccgaatttgaagatgaaatcttctcgagacatggtgagttgggtttcgtcgacgaggtagtctctgtcgaatagca |
206 |
Q |
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| T |
33134886 |
aactgttctcgtttcatgtgttcgccgtatttgaagatgaaatcttcacgagacatggtgagttcggtttcttcgacgaggtagtttctgtcggataaca |
33134787 |
T |
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| Q |
207 |
tttggagaatggttttgcggattctgtatagttttgttatgtcttcatcgg |
257 |
Q |
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| T |
33134786 |
tttggagaagggttttctggattctgaaaagttttgttatgtcttcttcgg |
33134736 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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