View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2717_high_45 (Length: 263)
Name: NF2717_high_45
Description: NF2717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2717_high_45 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 4505948 - 4505713
Alignment:
| Q |
11 |
caaaggttgattaatgttttcttttgagttatttgttttagaggctcttttgagttatcatgtaaaataaattatttacttcttattgcaaaattatgag |
110 |
Q |
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| T |
4505948 |
caaaggttgattaatgttttcttttgagttatttgttttagaggctcttttgagttattatgtaaaataaattatttacttcttattgcaaaattatgag |
4505849 |
T |
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| Q |
111 |
tccgacctcatcattaccattgaggatacctaaagccgtgtatatacttccttctttaagttccaaaatttctgataaaaaataccattaggtttcatgt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4505848 |
tccgacctcatcattaccattgaggatacctaaagccgtgtatatacttccttctttaagttccaaaatttctgataaaaaataccattaggtttcatgt |
4505749 |
T |
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| Q |
211 |
tttttatgtcttgattgatttcttcctctggaaact |
246 |
Q |
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||||||||||||||||||||| |||||||||||||| |
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| T |
4505748 |
tttttatgtcttgattgattttttcctctggaaact |
4505713 |
T |
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