View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2717_high_59 (Length: 216)
Name: NF2717_high_59
Description: NF2717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2717_high_59 |
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Alignment Details
Target: chr1 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 19417044 - 19416933
Alignment:
| Q |
102 |
tcctggtatagttggcaactttgtggtccaactttctaatcattaattaccataaactagggacagagccacaaatcaaactta-ggaggaccaagttga |
200 |
Q |
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| T |
19417044 |
tcctggtatagttgataactttgtggtccaactttctaatcattaattactataaactagggacagagccacaaatcaaacttagggaggaccaagttga |
19416945 |
T |
|
| Q |
201 |
aagtataattta |
212 |
Q |
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|||||||||||| |
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| T |
19416944 |
aagtataattta |
19416933 |
T |
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