View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2717_low_43 (Length: 288)
Name: NF2717_low_43
Description: NF2717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2717_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 43700754 - 43700968
Alignment:
| Q |
9 |
gtattcccatcctttgatacaataacatgggaagaggaacacatgagtgctgcaaggaacaaaaacataaccaacgctgtaacattactattatttgagt |
108 |
Q |
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| T |
43700754 |
gtattcccatcctttgatacaataacatgggaagaggaacacatgagtgctgcaaggaacaaaaacataacaaacgctgtaacattactattatttgagt |
43700853 |
T |
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| Q |
109 |
actccatggatgaaagtttgaagcttaattgatttaattgatttttcacctcagtttcagttgtatctaactgcatcaacatatatctatttatacaaag |
208 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43700854 |
actccatggatgaaagtttgaagc---------ttaattgatttttcacctcagtttcagttgtatctaactgcatcaacatatatctatttatacaaag |
43700944 |
T |
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| Q |
209 |
ggaaaacagttgtttaaagcccta |
232 |
Q |
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|||||||||||||||||||||||| |
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| T |
43700945 |
ggaaaacagttgtttaaagcccta |
43700968 |
T |
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